Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-26 00:10:19 (167990): Detected: vboxwrapper 26206
2025-07-26 00:10:19 (167990): Detected: BOINC client v8.2.5
2025-07-26 00:10:20 (167990): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-07-26 00:10:20 (167990): Successfully copied 'init_data.xml' to the shared directory.
2025-07-26 00:10:20 (167990): Create VM. (boinc_badee4d79aadd363, slot#0)
2025-07-26 00:10:20 (167990): Setting Memory Size for VM. (4800MB)
2025-07-26 00:10:20 (167990): Setting CPU Count for VM. (8)
2025-07-26 00:10:20 (167990): Setting Chipset Options for VM.
2025-07-26 00:10:20 (167990): Setting Graphics Controller Options for VM.
2025-07-26 00:10:20 (167990): Setting Boot Options for VM.
2025-07-26 00:10:20 (167990): Setting Network Configuration for NAT.
2025-07-26 00:10:20 (167990): Enabling VM Network Access.
2025-07-26 00:10:20 (167990): Disabling USB Support for VM.
2025-07-26 00:10:20 (167990): Disabling COM Port Support for VM.
2025-07-26 00:10:20 (167990): Disabling LPT Port Support for VM.
2025-07-26 00:10:20 (167990): Disabling Audio Support for VM.
2025-07-26 00:10:20 (167990): Disabling Clipboard Support for VM.
2025-07-26 00:10:20 (167990): Disabling Drag and Drop Support for VM.
2025-07-26 00:10:20 (167990): Adding storage controller(s) to VM.
2025-07-26 00:10:21 (167990): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-26 00:10:22 (167990): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-26 00:10:22 (167990): forwarding host port 55235 to guest port 80
2025-07-26 00:10:22 (167990): Enabling remote desktop for VM.
2025-07-26 00:10:22 (167990): Required extension pack not installed, remote desktop not enabled.
2025-07-26 00:10:22 (167990): Enabling shared directory for VM.
2025-07-26 00:10:22 (167990): Starting VM using VBoxManage interface. (boinc_badee4d79aadd363, slot#0)
2025-07-26 00:10:23 (167990): Successfully started VM. (PID = '168432')
2025-07-26 00:10:23 (167990): Reporting VM Process ID to BOINC.
2025-07-26 00:10:23 (167990): Guest Log: BIOS: VirtualBox 7.0.16
2025-07-26 00:10:23 (167990): Guest Log: CPUID EDX: 0x178bfbff
2025-07-26 00:10:23 (167990): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-26 00:10:23 (167990): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-26 00:10:23 (167990): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-26 00:10:23 (167990): Detected: Web Application Enabled (http://localhost:55235)
2025-07-26 00:10:23 (167990): Preference change detected
2025-07-26 00:10:23 (167990): Setting CPU throttle for VM. (50%)
2025-07-26 00:10:23 (167990): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-26 00:10:25 (167990): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-26 00:10:25 (167990): Guest Log: BIOS: Booting from Hard Disk...
2025-07-26 00:10:28 (167990): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-26 00:10:28 (167990): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-26 00:10:28 (167990): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-26 00:10:37 (167990): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-26 00:10:37 (167990): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-26 00:10:43 (167990): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.000143 main     Log opened 2025-07-26T06:10:41.037862000Z
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.000244 main     OS Product: Linux
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.000271 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.000292 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.000313 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.000313 main     Process ID: 1358
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.000314 main     Package type: LINUX_64BITS_GENERIC
2025-07-26 00:10:43 (167990): Guest Log: 00:00:00.001697 main     5.2.32 r132073 started. Verbose level = 0
2025-07-26 00:10:43 (167990): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-26 00:10:43 (167990): Guest Log: [INFO] Mounting shared directory
2025-07-26 00:10:43 (167990): Guest Log: [INFO] Checking for init_data.xml
2025-07-26 00:10:48 (167990): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-26 00:10:48 (167990): Guest Log: [INFO] Detected branch: prod
2025-07-26 00:10:48 (167990): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-26 00:10:48 (167990): Guest Log: Copying input files
2025-07-26 00:10:49 (167990): Guest Log: Copied input files into RunAtlas.
2025-07-26 00:10:49 (167990): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-26 00:10:49 (167990): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-26 00:10:49 (167990): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-26 00:10:49 (167990): Guest Log: Further information can be found at the LHC@home message board.
2025-07-26 00:10:58 (167990): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-26 00:10:58 (167990): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-26 00:10:58 (167990): Guest Log: 2.6.3.0 1633 0 32220 148766 3 1 3117619 4096000 0 65024 0 0 n/a 1 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-07-26 00:10:59 (167990): Guest Log: copied the webapp to /var/www
2025-07-26 00:10:59 (167990): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-26 00:10:59 (167990): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-26 00:10:59 (167990): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-26 00:10:59 (167990): Guest Log:  *** Starting ATLAS job. (PandaID=6744921863 taskID=45743349) ***
2025-07-26 01:49:24 (167990): Status Report: Elapsed Time: '6000.000000'
2025-07-26 01:49:24 (167990): Status Report: CPU Time: '22609.290000'
2025-07-26 01:52:21 (167990): Guest Log:  *** Job finished ***
2025-07-26 01:52:21 (167990): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:00,489 | INFO     | all workflow threads have been joined
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:00,490 | INFO     | end of generic workflow (traces error code: 0)
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:00,490 | INFO     | traces error code: 0
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:00,490 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,365 | INFO     | PID=5986 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,366 | INFO     | found 0 job(s) in 20 queues
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,366 | INFO     | [monitor] control thread has ended
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,420 [wrapper] ==== pilot stdout END ====
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,425 [wrapper] ==== wrapper stdout RESUME ====
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,428 [wrapper] pilotpid: 5986
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,430 [wrapper] Pilot exit status: 0
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,607 [wrapper] pandaids: 6744921863
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,631 [wrapper] cleanup supervisor_pilot  1615 5987
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,640 [wrapper] Test setup, not cleaning
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,648 [wrapper] apfmon messages muted
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,652 [wrapper] ==== wrapper stdout END ====
2025-07-26 01:52:21 (167990): Guest Log: 2025-07-26 07:52:20,655 [wrapper] ==== wrapper stderr END ====
2025-07-26 01:52:21 (167990): Guest Log:  *** Error codes and diagnostics ***
2025-07-26 01:52:21 (167990): Guest Log:     "exeErrorCode": 0,
2025-07-26 01:52:21 (167990): Guest Log:     "exeErrorDiag": "",
2025-07-26 01:52:21 (167990): Guest Log:     "pilotErrorCode": 0,
2025-07-26 01:52:21 (167990): Guest Log:     "pilotErrorDiag": "",
2025-07-26 01:52:21 (167990): Guest Log:  *** Listing of results directory ***
2025-07-26 01:52:21 (167990): Guest Log: total 213516
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 24 18:26 pilot3.tar.gz
2025-07-26 01:52:21 (167990): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 24 18:39 runpilot2-wrapper.sh
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 24 18:39 queuedata.json
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas    542879 Jul 26 06:10 input.tar.gz
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas     15095 Jul 26 06:10 start_atlas.sh
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas      6418 Jul 26 06:10 init_data.xml
2025-07-26 01:52:21 (167990): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 26 06:10 EVNT.45743347._000320.pool.root.1 -> /data/./ATLAS.root_0
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas      2560 Jul 26 06:10 pandaJob.out
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas    980001 Jul 26 06:12 agis_schedconf.cvmfs.json
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 26 06:12 agis_ddmendpoints.agis.ALL.json
2025-07-26 01:52:21 (167990): Guest Log: drwx------. 4 atlas atlas      4096 Jul 26 06:12 pilot3
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas 213425027 Jul 26 07:51 HITS.45743349._006219.pool.root.1
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas      1022 Jul 26 07:51 memory_monitor_summary.json
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas    300211 Jul 26 07:51 log.45743349._006219.job.log.tgz.1
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas      7794 Jul 26 07:51 heartbeat.json
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas        95 Jul 26 07:52 pilot_heartbeat.json
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas       744 Jul 26 07:52 pilotlog.txt
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas    404858 Jul 26 07:52 log.45743349._006219.job.log.1
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas       357 Jul 26 07:52 output.list
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 26 07:52 runtime_log
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas    727040 Jul 26 07:52 result.tar.gz
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas       656 Jul 26 07:52 ZShMDmi1Fz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmORxKDmEV9S5n.diag
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 atlas atlas      8599 Jul 26 07:52 runtime_log.err
2025-07-26 01:52:21 (167990): Guest Log: Looking for outputfile HITS.45743349._006219.pool.root.1
2025-07-26 01:52:21 (167990): Guest Log: HITS file was successfully produced
2025-07-26 01:52:21 (167990): Guest Log: -rw-------. 1 atlas atlas 213425027 Jul 26 07:51 /home/atlas/RunAtlas/HITS.45743349._006219.pool.root.1
2025-07-26 01:52:21 (167990): Guest Log: Successfully finished the ATLAS job!
2025-07-26 01:52:21 (167990): Guest Log: Copying the results back to the shared directory!
2025-07-26 01:52:21 (167990): Guest Log:  *** Contents of shared directory: ***
2025-07-26 01:52:21 (167990): Guest Log: total 226508
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 root root 230640154 Jul 26 06:10 ATLAS.root_0
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 root root      6418 Jul 26 06:10 init_data.xml
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 root root    542879 Jul 26 06:10 input.tar.gz
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 root root    727040 Jul 26 07:52 result.tar.gz
2025-07-26 01:52:21 (167990): Guest Log: -rw-r--r--. 1 root root     15095 Jul 26 06:10 start_atlas.sh
2025-07-26 01:52:21 (167990): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-26 01:52:21 (167990): VM Completion File Detected.
2025-07-26 01:52:21 (167990): Powering off VM.
2025-07-26 01:52:21 (167990): Successfully stopped VM.
2025-07-26 01:52:21 (167990): Deregistering VM. (boinc_badee4d79aadd363, slot#0)
2025-07-26 01:52:21 (167990): Removing network bandwidth throttle group from VM.
2025-07-26 01:52:21 (167990): Removing VM from VirtualBox.
01:52:26 (167990): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN