Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:40:04 (1729868): wrapper (7.7.26015): starting
04:40:04 (1729868): wrapper: running run_atlas (--nthreads 3)
[2025-07-25 04:40:04] Arguments: --nthreads 3
[2025-07-25 04:40:04] Threads: 3
[2025-07-25 04:40:04] Checking for CVMFS
[2025-07-25 04:40:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 04:40:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 04:40:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 04:40:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 04:40:05] 2.9.2.0 1544593 641 67668 148723 3 57 28821959 36864000 0 130560 0 489924 99.986 25457 1761 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-25 04:40:05] CVMFS is ok
[2025-07-25 04:40:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 04:40:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 04:40:05] Further information can be found at the LHC@home message board.
[2025-07-25 04:40:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 04:40:05] Checking for apptainer binary...
[2025-07-25 04:40:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 04:40:05] Running /usr/bin/apptainer --version
[2025-07-25 04:40:05] apptainer version 1.4.1-1.1
[2025-07-25 04:40:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 04:40:05] belleA263b
[2025-07-25 04:40:05] apptainer works
[2025-07-25 04:40:05] Set ATHENA_PROC_NUMBER=3
[2025-07-25 04:40:05] Set ATHENA_CORE_NUMBER=3
[2025-07-25 04:40:05] Starting ATLAS job with PandaID=6744914227
[2025-07-25 04:40:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 06:14:59]  *** The last 200 lines of the pilot log: ***
[2025-07-25 06:14:59]  is_tar=False
[2025-07-25 06:14:59]  lfn=log.45743349._004072.job.log.tgz.1
[2025-07-25 06:14:59]  mtime=0
[2025-07-25 06:14:59]  protocol_id=None
[2025-07-25 06:14:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-25 06:14:59]  replicas=None
[2025-07-25 06:14:59]  scope=mc23_13p6TeV
[2025-07-25 06:14:59]  status=None
[2025-07-25 06:14:59]  status_code=0
[2025-07-25 06:14:59]  storage_token=
[2025-07-25 06:14:59]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6744914227/log.45743349._004072.job.log.tgz.1
[2025-07-25 06:14:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/d0/log.45743349._004072.job.log.tgz.1
[2025-07-25 06:14:59]  workdir=None
[2025-07-25 06:14:59] ]
[2025-07-25 06:14:59] 2025-07-25 04:14:20,659 | INFO     | transferring file log.45743349._004072.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6744914227/log.45743349._004072.job.log.tgz.1 to /local/data/boinc/
[2025-07-25 06:14:59] 2025-07-25 04:14:20,659 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6744914227/log.45743349._004072.job.log.tgz.1 /local/data/boinc/slots/0/log.45743349._0040
[2025-07-25 06:14:59] 2025-07-25 04:14:20,672 | INFO     | adding to output.list: log.45743349._004072.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/d0/log.45743349._004072.job.log.tg
[2025-07-25 06:14:59] 2025-07-25 04:14:20,672 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-25 06:14:59] 2025-07-25 04:14:20,672 | INFO     | summary of transferred files:
[2025-07-25 06:14:59] 2025-07-25 04:14:20,672 | INFO     |  -- lfn=log.45743349._004072.job.log.tgz.1, status_code=0, status=transferred
[2025-07-25 06:14:59] 2025-07-25 04:14:20,672 | INFO     | stage-out finished correctly
[2025-07-25 06:14:59] 2025-07-25 04:14:22,803 | WARNING  | process 1740003 can no longer be monitored (due to stat problems) - aborting
[2025-07-25 06:14:59] 2025-07-25 04:14:22,804 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744914227/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 06:14:59] 2025-07-25 04:14:22,837 | INFO     | number of running child processes to parent process 1740003: 1
[2025-07-25 06:14:59] 2025-07-25 04:14:22,837 | INFO     | maximum number of monitored processes: 6
[2025-07-25 06:14:59] 2025-07-25 04:14:23,919 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-25 06:14:59] 2025-07-25 04:14:24,299 | INFO     | job 6744914227 has state=finished
[2025-07-25 06:14:59] 2025-07-25 04:14:24,299 | INFO     | preparing for final server update for job 6744914227 in state='finished'
[2025-07-25 06:14:59] 2025-07-25 04:14:24,300 | INFO     | this job has now completed (state=finished)
[2025-07-25 06:14:59] 2025-07-25 04:14:24,300 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-25 06:14:59] 2025-07-25 04:14:24,300 | INFO     | log transfer has been attempted: DONE
[2025-07-25 06:14:59] 2025-07-25 04:14:24,300 | INFO     | job 6744914227 has finished - writing final server update
[2025-07-25 06:14:59] 2025-07-25 04:14:24,300 | INFO     | total number of processed events: 400 (read)
[2025-07-25 06:14:59] 2025-07-25 04:14:24,300 | INFO     | executing command: lscpu
[2025-07-25 06:14:59] 2025-07-25 04:14:24,317 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-25 06:14:59] 2025-07-25 04:14:25,340 | INFO     | monitor loop #435: job 0:6744914227 is in state 'finished'
[2025-07-25 06:14:59] 2025-07-25 04:14:25,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-25 06:14:59] 2025-07-25 04:14:26,649 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-25 06:14:59] 2025-07-25 04:14:26,650 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3582.0132500000004
[2025-07-25 06:14:59] 2025-07-25 04:14:26,651 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6744914227/memory_monitor_summary.json (trf name=prmon)
[2025-07-25 06:14:59] 2025-07-25 04:14:26,651 | INFO     | extracted standard info from prmon json
[2025-07-25 06:14:59] 2025-07-25 04:14:26,652 | INFO     | extracted standard memory fields from prmon json
[2025-07-25 06:14:59] 2025-07-25 04:14:26,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 06:14:59] 2025-07-25 04:14:26,652 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 06:14:59] 2025-07-25 04:14:26,652 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 06:14:59] 2025-07-25 04:14:26,652 | INFO     | fitting pss+swap vs Time
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | sum of square deviations: 197203697.5
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | sum of deviations: -11747304421.0
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | mean x: 1753414127.5
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | mean y: 2437988.0465116277
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | -- intersect: 104452252027.78888
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | intersect: 104452252027.78888
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | chi2: 0.08867340807175603
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | -- intersect: 104452252027.78888
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | current memory leak: -59.57 B/s (using 86 data points, chi2=0.09)
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | could have reported an average CPU frequency of 4019 MHz (7 samples)
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | ..............................
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . Timing measurements:
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . get job = 0 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . initial setup = 1 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . payload setup = 3 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . stage-in = 0 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . payload execution = 5629 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . stage-out = 0 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | . log creation = 0 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,653 | INFO     | ..............................
[2025-07-25 06:14:59] 2025-07-25 04:14:26,683 | INFO     | 
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | job summary report
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | --------------------------------------------------
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | PanDA job id: 6744914227
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | task id: 45743349
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | errors: (none)
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | pilot state: finished 
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | transexitcode: 0
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | exeerrorcode: 0
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | exeerrordiag: 
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | exitcode: 0
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | exitmsg: OK
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | cpuconsumptiontime: 16307 s
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | nevents: 400
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | neventsw: 0
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | pid: 1740003
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | pgrp: 1740003
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | corecount: 3
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | event service: False
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | sizes: {0: 2397473, 2: 2397735, 10: 2397763, 5636: 2424569, 5637: 2433573, 5640: 2433629, 5643: 2433951}
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | --------------------------------------------------
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | 
[2025-07-25 06:14:59] 2025-07-25 04:14:26,684 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,696 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 06:14:59] 2025-07-25 04:14:26,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 06:14:59] 2025-07-25 04:14:26,697 | INFO     | job 6744914227 has completed (purged errors)
[2025-07-25 06:14:59] 2025-07-25 04:14:26,697 | INFO     | overall cleanup function is called
[2025-07-25 06:14:59] 2025-07-25 04:14:27,698 | INFO     | --- collectZombieJob: --- 10, [1740003]
[2025-07-25 06:14:59] 2025-07-25 04:14:27,698 | INFO     | zombie collector waiting for pid 1740003
[2025-07-25 06:14:59] 2025-07-25 04:14:27,698 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 06:14:59] 2025-07-25 04:14:27,699 | INFO     | collected zombie processes
[2025-07-25 06:14:59] 2025-07-25 04:14:27,699 | INFO     | will attempt to kill all subprocesses of pid=1740003
[2025-07-25 06:14:59] 2025-07-25 04:14:27,738 | INFO     | process IDs to be killed: [1740003] (in reverse order)
[2025-07-25 06:14:59] 2025-07-25 04:14:27,762 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 06:14:59] 2025-07-25 04:14:27,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 06:14:59] 2025-07-25 04:14:27,763 | INFO     | did not find any defunct processes belonging to 1740003
[2025-07-25 06:14:59] 2025-07-25 04:14:27,764 | INFO     | did not find any defunct processes belonging to 1740003
[2025-07-25 06:14:59] 2025-07-25 04:14:27,764 | INFO     | ready for new job
[2025-07-25 06:14:59] 2025-07-25 04:14:27,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 06:14:59] 2025-07-25 04:14:27,765 | INFO     | ***************************************
[2025-07-25 06:14:59] 2025-07-25 04:14:27,765 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 06:14:59] 2025-07-25 04:14:27,765 | INFO     | ***************************************
[2025-07-25 06:14:59] 2025-07-25 04:14:27,765 | INFO     | 
[2025-07-25 06:14:59] 2025-07-25 04:14:27,765 | INFO     | architecture information:
[2025-07-25 06:14:59] 2025-07-25 04:14:27,765 | INFO     | executing command: cat /etc/os-release
[2025-07-25 06:14:59] 2025-07-25 04:14:27,774 | INFO     | cat /etc/os-release:
[2025-07-25 06:14:59] NAME="CentOS Linux"
[2025-07-25 06:14:59] VERSION="7 (Core)"
[2025-07-25 06:14:59] ID="centos"
[2025-07-25 06:14:59] ID_LIKE="rhel fedora"
[2025-07-25 06:14:59] VERSION_ID="7"
[2025-07-25 06:14:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 06:14:59] ANSI_COLOR="0;31"
[2025-07-25 06:14:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 06:14:59] HOME_URL="https://www.centos.org/"
[2025-07-25 06:14:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 06:14:59] 
[2025-07-25 06:14:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 06:14:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 06:14:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 06:14:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 06:14:59] 
[2025-07-25 06:14:59] 2025-07-25 04:14:27,775 | INFO     | ***************************************
[2025-07-25 06:14:59] 2025-07-25 04:14:28,278 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-25 06:14:59] 2025-07-25 04:14:28,291 | INFO     | sufficient remaining disk space (371653083136 B)
[2025-07-25 06:14:59] 2025-07-25 04:14:28,291 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 06:14:59] 2025-07-25 04:14:28,291 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 06:14:59] 2025-07-25 04:14:28,291 | INFO     | update_server=False
[2025-07-25 06:14:59] 2025-07-25 04:14:28,291 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 06:14:59] 2025-07-25 04:14:28,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 06:14:59] 2025-07-25 04:14:28,495 | INFO     | all data control threads have been joined
[2025-07-25 06:14:59] 2025-07-25 04:14:28,715 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 06:14:59] 2025-07-25 04:14:28,805 | INFO     | all job control threads have been joined
[2025-07-25 06:14:59] 2025-07-25 04:14:28,850 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 06:14:59] 2025-07-25 04:14:28,850 | INFO     | aborting loop
[2025-07-25 06:14:59] 2025-07-25 04:14:29,107 | INFO     | all payload control threads have been joined
[2025-07-25 06:14:59] 2025-07-25 04:14:29,297 | INFO     | [job] queue monitor thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:29,297 | INFO     | [job] retrieve thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:29,372 | INFO     | [payload] validate_post thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:29,501 | INFO     | [data] control thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:29,811 | INFO     | [job] control thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:29,855 | INFO     | [job] job monitor thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:29,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 06:14:59] 2025-07-25 04:14:30,113 | INFO     | [payload] control thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:30,222 | INFO     | [data] copytool_in thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:30,303 | INFO     | [payload] failed_post thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:30,341 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:30,653 | INFO     | [job] validate thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:30,713 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:30,720 | INFO     | [data] copytool_out thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:30,786 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:33,965 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:38,699 | INFO     | job.realtimelogging is not enabled
[2025-07-25 06:14:59] 2025-07-25 04:14:39,705 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 06:14:59] 2025-07-25 04:14:41,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895380043584)>', '<ExcThread(monitor, started 139894416447232)>']
[2025-07-25 06:14:59] 2025-07-25 04:14:46,336 | INFO     | all workflow threads have been joined
[2025-07-25 06:14:59] 2025-07-25 04:14:46,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 06:14:59] 2025-07-25 04:14:46,336 | INFO     | traces error code: 0
[2025-07-25 06:14:59] 2025-07-25 04:14:46,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 06:14:59] 2025-07-25 04:14:59,394 | INFO     | PID=1733502 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 06:14:59] 2025-07-25 04:14:59,395 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 06:14:59] 2025-07-25 04:14:59,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 06:14:59] 2025-07-25 04:14:59,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 06:14:59] 2025-07-25 04:14:59,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 06:14:59] 2025-07-25 04:14:59,395 | INFO     | [monitor] control thread has ended
[2025-07-25 06:14:59] 2025-07-25 04:14:59,441 [wrapper] ==== pilot stdout END ====
[2025-07-25 06:14:59] 2025-07-25 04:14:59,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 06:14:59] 2025-07-25 04:14:59,446 [wrapper] pilotpid: 1733502
[2025-07-25 06:14:59] 2025-07-25 04:14:59,448 [wrapper] Pilot exit status: 0
[2025-07-25 06:14:59] 2025-07-25 04:14:59,457 [wrapper] pandaids: 6744914227
[2025-07-25 06:14:59] 2025-07-25 04:14:59,473 [wrapper] cleanup supervisor_pilot 1752311 1733503
[2025-07-25 06:14:59] 2025-07-25 04:14:59,475 [wrapper] Test setup, not cleaning
[2025-07-25 06:14:59] 2025-07-25 04:14:59,478 [wrapper] apfmon messages muted
[2025-07-25 06:14:59] 2025-07-25 04:14:59,480 [wrapper] ==== wrapper stdout END ====
[2025-07-25 06:14:59] 2025-07-25 04:14:59,482 [wrapper] ==== wrapper stderr END ====
[2025-07-25 06:14:59]  *** Error codes and diagnostics ***
[2025-07-25 06:14:59]     "exeErrorCode": 0,
[2025-07-25 06:14:59]     "exeErrorDiag": "",
[2025-07-25 06:14:59]     "pilotErrorCode": 0,
[2025-07-25 06:14:59]     "pilotErrorDiag": "",
[2025-07-25 06:14:59]  *** Listing of results directory ***
[2025-07-25 06:14:59] total 441988
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc    530466 Jul 24 20:18 pilot3.tar.gz
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc      5112 Jul 24 20:20 queuedata.json
[2025-07-25 06:14:59] -rwx------ 1 boinc boinc     36292 Jul 24 20:21 runpilot2-wrapper.sh
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc       100 Jul 25 04:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 06:14:59] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 04:40 run_atlas
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc       105 Jul 25 04:40 job.xml
[2025-07-25 06:14:59] -rw-r--r-- 2 boinc boinc 231112101 Jul 25 04:40 EVNT.45743347._000234.pool.root.1
[2025-07-25 06:14:59] -rw-r--r-- 2 boinc boinc    542888 Jul 25 04:40 input.tar.gz
[2025-07-25 06:14:59] -rw-r--r-- 2 boinc boinc     15095 Jul 25 04:40 start_atlas.sh
[2025-07-25 06:14:59] drwxrwx--x 2 boinc boinc      4096 Jul 25 04:40 shared
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc         0 Jul 25 04:40 boinc_setup_complete
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc      6451 Jul 25 04:40 init_data.xml
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc         0 Jul 25 04:40 boinc_lockfile
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc      2561 Jul 25 04:40 pandaJob.out
[2025-07-25 06:14:59] -rw------- 1 boinc boinc    979709 Jul 25 04:40 agis_schedconf.cvmfs.json
[2025-07-25 06:14:59] -rw------- 1 boinc boinc   1593052 Jul 25 04:40 agis_ddmendpoints.agis.ALL.json
[2025-07-25 06:14:59] drwx------ 4 boinc boinc      4096 Jul 25 04:40 pilot3
[2025-07-25 06:14:59] -rw------- 1 boinc boinc 216045509 Jul 25 06:14 HITS.45743349._004072.pool.root.1
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc       529 Jul 25 06:14 boinc_task_state.xml
[2025-07-25 06:14:59] -rw------- 1 boinc boinc      1016 Jul 25 06:14 memory_monitor_summary.json
[2025-07-25 06:14:59] -rw------- 1 boinc boinc    235301 Jul 25 06:14 log.45743349._004072.job.log.tgz.1
[2025-07-25 06:14:59] -rw------- 1 boinc boinc      7755 Jul 25 06:14 heartbeat.json
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc        27 Jul 25 06:14 wrapper_checkpoint.txt
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc      8192 Jul 25 06:14 boinc_mmap_file
[2025-07-25 06:14:59] -rw------- 1 boinc boinc       747 Jul 25 06:14 pilotlog.txt
[2025-07-25 06:14:59] -rw------- 1 boinc boinc        95 Jul 25 06:14 pilot_heartbeat.json
[2025-07-25 06:14:59] -rw------- 1 boinc boinc    545178 Jul 25 06:14 log.45743349._004072.job.log.1
[2025-07-25 06:14:59] -rw------- 1 boinc boinc       357 Jul 25 06:14 output.list
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc       620 Jul 25 06:14 runtime_log
[2025-07-25 06:14:59] -rw------- 1 boinc boinc    798720 Jul 25 06:14 result.tar.gz
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc      8754 Jul 25 06:14 runtime_log.err
[2025-07-25 06:14:59] -rw------- 1 boinc boinc       662 Jul 25 06:14 9PNLDmJkFz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwBxKDmZLjhVo.diag
[2025-07-25 06:14:59] -rw-r--r-- 1 boinc boinc     21584 Jul 25 06:14 stderr.txt
[2025-07-25 06:14:59] HITS file was successfully produced:
[2025-07-25 06:14:59] -rw------- 1 boinc boinc 216045509 Jul 25 06:14 shared/HITS.pool.root.1
[2025-07-25 06:14:59]  *** Contents of shared directory: ***
[2025-07-25 06:14:59] total 438016
[2025-07-25 06:14:59] -rw-r--r-- 2 boinc boinc 231112101 Jul 25 04:40 ATLAS.root_0
[2025-07-25 06:14:59] -rw-r--r-- 2 boinc boinc    542888 Jul 25 04:40 input.tar.gz
[2025-07-25 06:14:59] -rw-r--r-- 2 boinc boinc     15095 Jul 25 04:40 start_atlas.sh
[2025-07-25 06:14:59] -rw------- 1 boinc boinc 216045509 Jul 25 06:14 HITS.pool.root.1
[2025-07-25 06:14:59] -rw------- 1 boinc boinc    798720 Jul 25 06:14 result.tar.gz
06:15:00 (1729868): run_atlas exited; CPU time 16323.434829
06:15:00 (1729868): called boinc_finish(0)

</stderr_txt>
]]>

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