Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:43 (822009): wrapper (7.7.26015): starting
19:01:43 (822009): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 19:01:43] Arguments: --nthreads 8
[2025-07-24 19:01:43] Threads: 8
[2025-07-24 19:01:43] Checking for CVMFS
[2025-07-24 19:01:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 19:01:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 19:01:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 19:01:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 19:01:43] 2.12.6.0 1904412 14694 392684 148718 3 710 16292482 32503808 21392 16776704 0 86914445 99.503 129703475 18527 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 19:01:43] CVMFS is ok
[2025-07-24 19:01:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 19:01:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 19:01:43] Further information can be found at the LHC@home message board.
[2025-07-24 19:01:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 19:01:43] Checking for apptainer binary...
[2025-07-24 19:01:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 19:01:43] Running /usr/bin/apptainer --version
[2025-07-24 19:01:43] apptainer version 1.4.1-1.el9
[2025-07-24 19:01:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 19:01:43] c7-7-36.aglt2.org
[2025-07-24 19:01:43] apptainer works
[2025-07-24 19:01:43] Set ATHENA_PROC_NUMBER=8
[2025-07-24 19:01:43] Set ATHENA_CORE_NUMBER=8
[2025-07-24 19:01:43] Starting ATLAS job with PandaID=6744921828
[2025-07-24 19:01:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 20:29:06]  *** The last 200 lines of the pilot log: ***
[2025-07-24 20:29:06]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6744921828/log.45743349._006184.job.log.tgz.1
[2025-07-24 20:29:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/7a/log.45743349._006184.job.log.tgz.1
[2025-07-24 20:29:06]  workdir=None
[2025-07-24 20:29:06] ]
[2025-07-24 20:29:06] 2025-07-25 00:28:24,821 | INFO     | transferring file log.45743349._006184.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6744921828/log.45743349._006184.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-24 20:29:06] 2025-07-25 00:28:24,821 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6744921828/log.45743349._006184.job.log.tgz.1 /tmp/boinchome/slots/1/log.45743349._006184.job
[2025-07-24 20:29:06] 2025-07-25 00:28:24,842 | INFO     | adding to output.list: log.45743349._006184.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/7a/log.45743349._006184.job.log.tg
[2025-07-24 20:29:06] 2025-07-25 00:28:24,843 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 20:29:06] 2025-07-25 00:28:24,843 | INFO     | summary of transferred files:
[2025-07-24 20:29:06] 2025-07-25 00:28:24,843 | INFO     |  -- lfn=log.45743349._006184.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 20:29:06] 2025-07-25 00:28:24,843 | INFO     | stage-out finished correctly
[2025-07-24 20:29:06] 2025-07-25 00:28:25,638 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 20:29:06] 2025-07-25 00:28:25,799 | INFO     | job 6744921828 has state=finished
[2025-07-24 20:29:06] 2025-07-25 00:28:25,800 | INFO     | preparing for final server update for job 6744921828 in state='finished'
[2025-07-24 20:29:06] 2025-07-25 00:28:25,800 | INFO     | this job has now completed (state=finished)
[2025-07-24 20:29:06] 2025-07-25 00:28:25,800 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 20:29:06] 2025-07-25 00:28:25,800 | INFO     | log transfer has been attempted: DONE
[2025-07-24 20:29:06] 2025-07-25 00:28:25,800 | INFO     | job 6744921828 has finished - writing final server update
[2025-07-24 20:29:06] 2025-07-25 00:28:25,800 | INFO     | total number of processed events: 400 (read)
[2025-07-24 20:29:06] 2025-07-25 00:28:25,803 | INFO     | executing command: lscpu
[2025-07-24 20:29:06] 2025-07-25 00:28:25,869 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 20:29:06] 2025-07-25 00:28:29,095 | WARNING  | process 832661 can no longer be monitored (due to stat problems) - aborting
[2025-07-24 20:29:06] 2025-07-25 00:28:29,095 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6744921828/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 20:29:06] 2025-07-25 00:28:29,097 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6744921828/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 20:29:06] 2025-07-25 00:28:29,098 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2824236 B
[2025-07-24 20:29:06] 2025-07-25 00:28:29,098 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16737 B
[2025-07-24 20:29:06] 2025-07-25 00:28:29,098 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-24 20:29:06] 2025-07-25 00:28:31,909 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 20:29:06] 2025-07-25 00:28:31,915 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2938.9393645833334
[2025-07-24 20:29:06] 2025-07-25 00:28:31,936 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6744921828/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,937 | INFO     | extracted standard info from prmon json
[2025-07-24 20:29:06] 2025-07-25 00:28:31,937 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 20:29:06] 2025-07-25 00:28:31,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 20:29:06] 2025-07-25 00:28:31,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 20:29:06] 2025-07-25 00:28:31,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 20:29:06] 2025-07-25 00:28:31,939 | INFO     | fitting pss+swap vs Time
[2025-07-24 20:29:06] 2025-07-25 00:28:31,939 | INFO     | sum of square deviations: 147135265.44871774
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | sum of deviations: -6602437552.038462
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | mean x: 1753400803.525641
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | mean y: 2251846.269230769
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | -- intersect: 78683044473.83296
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | intersect: 78683044473.83296
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | chi2: 0.14303431095388067
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | -- intersect: 78683044473.83296
[2025-07-24 20:29:06] 2025-07-25 00:28:31,940 | INFO     | current memory leak: -44.87 B/s (using 78 data points, chi2=0.14)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | could have reported an average CPU frequency of 3053 MHz (6 samples)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | ..............................
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . Timing measurements:
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . get job = 0 s
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . initial setup = 2 s
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . payload setup = 9 s
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . stage-in = 0 s
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . payload execution = 5156 s
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . stage-out = 0 s
[2025-07-24 20:29:06] 2025-07-25 00:28:31,941 | INFO     | . log creation = 0 s
[2025-07-24 20:29:06] 2025-07-25 00:28:31,942 | INFO     | ..............................
[2025-07-24 20:29:06] 2025-07-25 00:28:31,959 | INFO     | sufficient remaining disk space (95392104448 B)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,959 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,960 | INFO     | size of work directory /tmp/boinchome/slots/1/PanDA_Pilot-6744921828: 3128219 B (within 2537553920 B limit)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,960 | INFO     | pfn file=/tmp/boinchome/slots/1/PanDA_Pilot-6744921828/HITS.45743349._006184.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,960 | INFO     | total size of present files: 0 B (workdir size: 3128219 B)
[2025-07-24 20:29:06] 2025-07-25 00:28:31,960 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6744921828/HITS.45743349._006184.pool.root.1 since it does not exist
[2025-07-24 20:29:06] 2025-07-25 00:28:32,052 | INFO     | 
[2025-07-24 20:29:06] 2025-07-25 00:28:32,052 | INFO     | job summary report
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | --------------------------------------------------
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | PanDA job id: 6744921828
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | task id: 45743349
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | errors: (none)
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | pilot state: finished 
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | transexitcode: 0
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | exeerrorcode: 0
[2025-07-24 20:29:06] 2025-07-25 00:28:32,053 | INFO     | exeerrordiag: 
[2025-07-24 20:29:06] 2025-07-25 00:28:32,056 | INFO     | exitcode: 0
[2025-07-24 20:29:06] 2025-07-25 00:28:32,056 | INFO     | exitmsg: OK
[2025-07-24 20:29:06] 2025-07-25 00:28:32,056 | INFO     | cpuconsumptiontime: 37317 s
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | nevents: 400
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | neventsw: 0
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | pid: 832661
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | pgrp: 832661
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | corecount: 8
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | event service: False
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | sizes: {0: 2397292, 1: 2397491, 6: 2397753, 11: 2397781, 5169: 2424082, 5171: 2433080, 5172: 2433264, 5178: 2433582}
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | --------------------------------------------------
[2025-07-24 20:29:06] 2025-07-25 00:28:32,057 | INFO     | 
[2025-07-24 20:29:06] 2025-07-25 00:28:32,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-24 20:29:06] 2025-07-25 00:28:32,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,079 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,079 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,079 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,080 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,080 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,080 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,080 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 20:29:06] 2025-07-25 00:28:32,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 20:29:06] 2025-07-25 00:28:32,082 | INFO     | job 6744921828 has completed (purged errors)
[2025-07-24 20:29:06] 2025-07-25 00:28:32,082 | INFO     | overall cleanup function is called
[2025-07-24 20:29:06] 2025-07-25 00:28:32,471 | INFO     | number of running child processes to parent process 832661: 1
[2025-07-24 20:29:06] 2025-07-25 00:28:32,471 | INFO     | maximum number of monitored processes: 6
[2025-07-24 20:29:06] 2025-07-25 00:28:32,471 | INFO     | aborting job monitoring since job object (job id=6744921828) has expired
[2025-07-24 20:29:06] 2025-07-25 00:28:33,093 | INFO     | --- collectZombieJob: --- 10, [832661]
[2025-07-24 20:29:06] 2025-07-25 00:28:33,094 | INFO     | zombie collector waiting for pid 832661
[2025-07-24 20:29:06] 2025-07-25 00:28:33,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 20:29:06] 2025-07-25 00:28:33,094 | INFO     | collected zombie processes
[2025-07-24 20:29:06] 2025-07-25 00:28:33,094 | INFO     | will attempt to kill all subprocesses of pid=832661
[2025-07-24 20:29:06] 2025-07-25 00:28:33,604 | INFO     | process IDs to be killed: [832661] (in reverse order)
[2025-07-24 20:29:06] 2025-07-25 00:28:33,743 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 20:29:06] 2025-07-25 00:28:33,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 20:29:06] 2025-07-25 00:28:33,765 | INFO     | did not find any defunct processes belonging to 832661
[2025-07-24 20:29:06] 2025-07-25 00:28:33,787 | INFO     | did not find any defunct processes belonging to 832661
[2025-07-24 20:29:06] 2025-07-25 00:28:33,787 | INFO     | ready for new job
[2025-07-24 20:29:06] 2025-07-25 00:28:33,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 20:29:06] 2025-07-25 00:28:33,789 | INFO     | ***************************************
[2025-07-24 20:29:06] 2025-07-25 00:28:33,789 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 20:29:06] 2025-07-25 00:28:33,789 | INFO     | ***************************************
[2025-07-24 20:29:06] 2025-07-25 00:28:33,789 | INFO     | 
[2025-07-24 20:29:06] 2025-07-25 00:28:33,808 | INFO     | architecture information:
[2025-07-24 20:29:06] 2025-07-25 00:28:33,808 | INFO     | executing command: cat /etc/os-release
[2025-07-24 20:29:06] 2025-07-25 00:28:33,829 | INFO     | cat /etc/os-release:
[2025-07-24 20:29:06] NAME="CentOS Linux"
[2025-07-24 20:29:06] VERSION="7 (Core)"
[2025-07-24 20:29:06] ID="centos"
[2025-07-24 20:29:06] ID_LIKE="rhel fedora"
[2025-07-24 20:29:06] VERSION_ID="7"
[2025-07-24 20:29:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 20:29:06] ANSI_COLOR="0;31"
[2025-07-24 20:29:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 20:29:06] HOME_URL="https://www.centos.org/"
[2025-07-24 20:29:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 20:29:06] 
[2025-07-24 20:29:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 20:29:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 20:29:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 20:29:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 20:29:06] 
[2025-07-24 20:29:06] 2025-07-25 00:28:33,829 | INFO     | ***************************************
[2025-07-24 20:29:06] 2025-07-25 00:28:34,332 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-24 20:29:06] 2025-07-25 00:28:34,354 | INFO     | sufficient remaining disk space (95395250176 B)
[2025-07-24 20:29:06] 2025-07-25 00:28:34,355 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 20:29:06] 2025-07-25 00:28:34,355 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 20:29:06] 2025-07-25 00:28:34,355 | INFO     | update_server=False
[2025-07-24 20:29:06] 2025-07-25 00:28:34,355 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 20:29:06] 2025-07-25 00:28:34,355 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 20:29:06] 2025-07-25 00:28:34,356 | INFO     | aborting loop
[2025-07-24 20:29:06] 2025-07-25 00:28:34,793 | INFO     | all payload control threads have been joined
[2025-07-24 20:29:06] 2025-07-25 00:28:34,823 | INFO     | all job control threads have been joined
[2025-07-24 20:29:06] 2025-07-25 00:28:34,988 | INFO     | all data control threads have been joined
[2025-07-24 20:29:06] 2025-07-25 00:28:35,360 | INFO     | [job] retrieve thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,361 | INFO     | [job] job monitor thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,361 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 20:29:06] 2025-07-25 00:28:35,444 | INFO     | [payload] validate_post thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,489 | INFO     | [payload] failed_post thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,751 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,799 | INFO     | [payload] control thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,829 | INFO     | [job] control thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:35,994 | INFO     | [data] control thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:36,132 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:36,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 20:29:06] 2025-07-25 00:28:36,564 | INFO     | [data] copytool_in thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:36,844 | INFO     | [job] validate thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:37,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 20:29:06] 2025-07-25 00:28:37,446 | INFO     | [data] copytool_out thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:38,073 | INFO     | [job] queue monitor thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:40,227 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:44,652 | INFO     | job.realtimelogging is not enabled
[2025-07-24 20:29:06] 2025-07-25 00:28:45,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 20:29:06] 2025-07-25 00:28:46,124 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594803185472)>', '<ExcThread(monitor, started 140594437400320)>']
[2025-07-24 20:29:06] 2025-07-25 00:28:51,150 | INFO     | all workflow threads have been joined
[2025-07-24 20:29:06] 2025-07-25 00:28:51,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 20:29:06] 2025-07-25 00:28:51,152 | INFO     | traces error code: 0
[2025-07-24 20:29:06] 2025-07-25 00:28:51,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 20:29:06] 2025-07-25 00:29:05,669 | INFO     | PID=825584 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 20:29:06] 2025-07-25 00:29:05,670 | INFO     | .. there are 19 such processes running
[2025-07-24 20:29:06] 2025-07-25 00:29:05,670 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 20:29:06] 2025-07-25 00:29:05,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 20:29:06] 2025-07-25 00:29:05,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 20:29:06] 2025-07-25 00:29:05,671 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 20:29:06] 2025-07-25 00:29:05,671 | INFO     | [monitor] control thread has ended
[2025-07-24 20:29:06] 2025-07-25 00:29:05,808 [wrapper] ==== pilot stdout END ====
[2025-07-24 20:29:06] 2025-07-25 00:29:05,812 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 20:29:06] 2025-07-25 00:29:05,816 [wrapper] pilotpid: 825584
[2025-07-24 20:29:06] 2025-07-25 00:29:05,818 [wrapper] Pilot exit status: 0
[2025-07-24 20:29:06] 2025-07-25 00:29:05,830 [wrapper] pandaids: 6744921828
[2025-07-24 20:29:06] 2025-07-25 00:29:05,932 [wrapper] cleanup supervisor_pilot 1138267 825585
[2025-07-24 20:29:06] 2025-07-25 00:29:05,935 [wrapper] Test setup, not cleaning
[2025-07-24 20:29:06] 2025-07-25 00:29:05,938 [wrapper] apfmon messages muted
[2025-07-24 20:29:06] 2025-07-25 00:29:05,941 [wrapper] ==== wrapper stdout END ====
[2025-07-24 20:29:06] 2025-07-25 00:29:05,944 [wrapper] ==== wrapper stderr END ====
[2025-07-24 20:29:06]  *** Error codes and diagnostics ***
[2025-07-24 20:29:06]     "exeErrorCode": 0,
[2025-07-24 20:29:06]     "exeErrorDiag": "",
[2025-07-24 20:29:06]     "pilotErrorCode": 0,
[2025-07-24 20:29:06]     "pilotErrorDiag": "",
[2025-07-24 20:29:06]  *** Listing of results directory ***
[2025-07-24 20:29:06] total 434276
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 14:26 pilot3.tar.gz
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 14:30 queuedata.json
[2025-07-24 20:29:06] -rwx------. 1 boincer umatlas     36292 Jul 24 14:32 runpilot2-wrapper.sh
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas       100 Jul 24 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 20:29:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 19:01 run_atlas
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas       105 Jul 24 19:01 job.xml
[2025-07-24 20:29:06] -rw-r--r--. 2 boincer umatlas 229382953 Jul 24 19:01 EVNT.45743347._000319.pool.root.1
[2025-07-24 20:29:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 19:01 shared
[2025-07-24 20:29:06] -rw-r--r--. 2 boincer umatlas    542878 Jul 24 19:01 input.tar.gz
[2025-07-24 20:29:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 19:01 start_atlas.sh
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas         0 Jul 24 19:01 boinc_lockfile
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas      2557 Jul 24 19:01 pandaJob.out
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas    979701 Jul 24 19:01 agis_schedconf.cvmfs.json
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas   1593052 Jul 24 19:01 agis_ddmendpoints.agis.ALL.json
[2025-07-24 20:29:06] drwx------. 4 boincer umatlas      4096 Jul 24 19:01 pilot3
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas      6931 Jul 24 20:19 init_data.xml
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas 209845417 Jul 24 20:27 HITS.45743349._006184.pool.root.1
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas       530 Jul 24 20:28 boinc_task_state.xml
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas      1040 Jul 24 20:28 memory_monitor_summary.json
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas    297830 Jul 24 20:28 log.45743349._006184.job.log.tgz.1
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas        95 Jul 24 20:28 pilot_heartbeat.json
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas      7791 Jul 24 20:28 heartbeat.json
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 20:29 boinc_mmap_file
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas        27 Jul 24 20:29 wrapper_checkpoint.txt
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas       822 Jul 24 20:29 pilotlog.txt
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas    497781 Jul 24 20:29 log.45743349._006184.job.log.1
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas       357 Jul 24 20:29 output.list
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas       620 Jul 24 20:29 runtime_log
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas    819200 Jul 24 20:29 result.tar.gz
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas       654 Jul 24 20:29 UUcKDm5uFz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmw7MLDmGA3fYm.diag
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas      8655 Jul 24 20:29 runtime_log.err
[2025-07-24 20:29:06] -rw-r--r--. 1 boincer umatlas     22571 Jul 24 20:29 stderr.txt
[2025-07-24 20:29:06] HITS file was successfully produced:
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas 209845417 Jul 24 20:27 shared/HITS.pool.root.1
[2025-07-24 20:29:06]  *** Contents of shared directory: ***
[2025-07-24 20:29:06] total 430292
[2025-07-24 20:29:06] -rw-r--r--. 2 boincer umatlas 229382953 Jul 24 19:01 ATLAS.root_0
[2025-07-24 20:29:06] -rw-r--r--. 2 boincer umatlas    542878 Jul 24 19:01 input.tar.gz
[2025-07-24 20:29:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 19:01 start_atlas.sh
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas 209845417 Jul 24 20:27 HITS.pool.root.1
[2025-07-24 20:29:06] -rw-------. 1 boincer umatlas    819200 Jul 24 20:29 result.tar.gz
20:29:07 (822009): run_atlas exited; CPU time 37511.753210
20:29:07 (822009): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN