Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:37:29 (26477): wrapper (7.7.26015): starting
12:37:29 (26477): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 12:37:29] Arguments: --nthreads 8
[2025-07-25 12:37:29] Threads: 8
[2025-07-25 12:37:29] Checking for CVMFS
[2025-07-25 12:37:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:37:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:37:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:37:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:37:31] 2.11.2.0 555 106649 138276 148738 1 109 22093236 25165824 4099 130560 0 67888093 99.835 50949839 4074 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-25 12:37:31] CVMFS is ok
[2025-07-25 12:37:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:37:31] Checking for apptainer binary...
[2025-07-25 12:37:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:37:31] Running /usr/bin/apptainer --version
[2025-07-25 12:37:31] apptainer version 1.3.2-1.el7
[2025-07-25 12:37:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:37:33] cg-vwn340.simple-grid.lan
[2025-07-25 12:37:33] apptainer works
[2025-07-25 12:37:33] Set ATHENA_PROC_NUMBER=8
[2025-07-25 12:37:33] Set ATHENA_CORE_NUMBER=8
[2025-07-25 12:37:33] Starting ATLAS job with PandaID=6744921529
[2025-07-25 12:37:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 23:35:31]  *** The last 200 lines of the pilot log: ***
[2025-07-25 23:35:31] 2025-07-25 15:05:23,582 | INFO     | fitting pss+swap vs Time
[2025-07-25 23:35:31] 2025-07-25 15:05:23,583 | INFO     | sum of square deviations: 5513070810.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,585 | INFO     | sum of deviations: -53111783902.000015
[2025-07-25 23:35:31] 2025-07-25 15:05:23,586 | INFO     | mean x: 1753447871.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,586 | INFO     | mean y: 2534284.256704981
[2025-07-25 23:35:31] 2025-07-25 15:05:23,586 | INFO     | -- intersect: 16894888403.67967
[2025-07-25 23:35:31] 2025-07-25 15:05:23,586 | INFO     | intersect: 16894888403.67967
[2025-07-25 23:35:31] 2025-07-25 15:05:23,586 | INFO     | chi2: 2.7603127834785246
[2025-07-25 23:35:31] 2025-07-25 15:05:23,587 | INFO     | sum of square deviations: 5202255680.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,589 | INFO     | sum of deviations: -34509741090.5
[2025-07-25 23:35:31] 2025-07-25 15:05:23,589 | INFO     | mean x: 1753447718.5
[2025-07-25 23:35:31] 2025-07-25 15:05:23,590 | INFO     | mean y: 2543279.70703125
[2025-07-25 23:35:31] 2025-07-25 15:05:23,590 | INFO     | -- intersect: 11634233550.87089
[2025-07-25 23:35:31] 2025-07-25 15:05:23,590 | INFO     | intersect: 11634233550.87089
[2025-07-25 23:35:31] 2025-07-25 15:05:23,590 | INFO     | chi2: 1.9929559660333798
[2025-07-25 23:35:31] 2025-07-25 15:05:23,590 | INFO     | current chi2=1.9929559660333798 (change=27.799632782127244 %)
[2025-07-25 23:35:31] 2025-07-25 15:05:23,591 | INFO     | sum of square deviations: 4903347750.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,593 | INFO     | sum of deviations: -33345934016.000008
[2025-07-25 23:35:31] 2025-07-25 15:05:23,593 | INFO     | mean x: 1753447566.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,593 | INFO     | mean y: 2543873.6494023902
[2025-07-25 23:35:31] 2025-07-25 15:05:23,593 | INFO     | -- intersect: 11927120676.579975
[2025-07-25 23:35:31] 2025-07-25 15:05:23,593 | INFO     | intersect: 11927120676.579975
[2025-07-25 23:35:31] 2025-07-25 15:05:23,594 | INFO     | chi2: 1.991368430674062
[2025-07-25 23:35:31] 2025-07-25 15:05:23,594 | INFO     | current chi2=1.991368430674062 (change=0.07965732240825543 %)
[2025-07-25 23:35:31] 2025-07-25 15:05:23,594 | INFO     | right removable region: 250
[2025-07-25 23:35:31] 2025-07-25 15:05:23,595 | INFO     | sum of square deviations: 5202255680.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,597 | INFO     | sum of deviations: -100287881582.5
[2025-07-25 23:35:31] 2025-07-25 15:05:23,597 | INFO     | mean x: 1753448023.5
[2025-07-25 23:35:31] 2025-07-25 15:05:23,597 | INFO     | mean y: 2557267.09765625
[2025-07-25 23:35:31] 2025-07-25 15:05:23,597 | INFO     | -- intersect: 33805122646.167355
[2025-07-25 23:35:31] 2025-07-25 15:05:23,597 | INFO     | intersect: 33805122646.167355
[2025-07-25 23:35:31] 2025-07-25 15:05:23,598 | INFO     | chi2: 1.0498118844033086
[2025-07-25 23:35:31] 2025-07-25 15:05:23,598 | INFO     | current chi2=1.0498118844033086 (change=61.96764762722492 %)
[2025-07-25 23:35:31] 2025-07-25 15:05:23,598 | INFO     | sum of square deviations: 4903347750.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,602 | INFO     | sum of deviations: -98909379213.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,603 | INFO     | mean x: 1753448176.0
[2025-07-25 23:35:31] 2025-07-25 15:05:23,603 | INFO     | mean y: 2556535.410358566
[2025-07-25 23:35:31] 2025-07-25 15:05:23,603 | INFO     | -- intersect: 35372772847.38358
[2025-07-25 23:35:31] 2025-07-25 15:05:23,603 | INFO     | intersect: 35372772847.38358
[2025-07-25 23:35:31] 2025-07-25 15:05:23,604 | INFO     | chi2: 1.0288995396570388
[2025-07-25 23:35:31] 2025-07-25 15:05:23,604 | INFO     | current chi2=1.0288995396570388 (change=1.9920087643279005 %)
[2025-07-25 23:35:31] 2025-07-25 15:05:23,604 | INFO     | left removable region: 20
[2025-07-25 23:35:31] 2025-07-25 15:05:23,604 | INFO     | sum of square deviations: 3772712597.5
[2025-07-25 23:35:31] 2025-07-25 15:05:23,606 | INFO     | sum of deviations: -63870112921.5
[2025-07-25 23:35:31] 2025-07-25 15:05:23,607 | INFO     | mean x: 1753448145.5
[2025-07-25 23:35:31] 2025-07-25 15:05:23,607 | INFO     | mean y: 2559410.256521739
[2025-07-25 23:35:31] 2025-07-25 15:05:23,607 | INFO     | -- intersect: 29687548171.205936
[2025-07-25 23:35:31] 2025-07-25 15:05:23,607 | INFO     | intersect: 29687548171.205936
[2025-07-25 23:35:31] 2025-07-25 15:05:23,607 | INFO     | chi2: 0.2246767814297162
[2025-07-25 23:35:31] 2025-07-25 15:05:23,608 | INFO     | -- intersect: 29687548171.205936
[2025-07-25 23:35:31] 2025-07-25 15:05:23,608 | INFO     | current memory leak: -16.93 B/s (using 230 data points, chi2=0.22)
[2025-07-25 23:35:31] 2025-07-25 15:05:23,609 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-25 23:35:31] 2025-07-25 15:05:23,609 | INFO     | ..............................
[2025-07-25 23:35:31] 2025-07-25 15:05:23,609 | INFO     | . Timing measurements:
[2025-07-25 23:35:31] 2025-07-25 15:05:23,609 | INFO     | . get job = 0 s
[2025-07-25 23:35:31] 2025-07-25 15:05:23,609 | INFO     | . initial setup = 1 s
[2025-07-25 23:35:31] 2025-07-25 15:05:23,609 | INFO     | . payload setup = 16 s
[2025-07-25 23:35:31] 2025-07-25 15:05:23,609 | INFO     | . stage-in = 0 s
[2025-07-25 23:35:31] 2025-07-25 15:05:23,610 | INFO     | . payload execution = 15900 s
[2025-07-25 23:35:31] 2025-07-25 15:05:23,610 | INFO     | . stage-out = 4 s
[2025-07-25 23:35:31] 2025-07-25 15:05:23,610 | INFO     | . log creation = 1 s
[2025-07-25 23:35:31] 2025-07-25 15:05:23,610 | INFO     | ..............................
[2025-07-25 23:35:31] 2025-07-25 15:05:24,071 | INFO     | 
[2025-07-25 23:35:31] 2025-07-25 15:05:24,071 | INFO     | job summary report
[2025-07-25 23:35:31] 2025-07-25 15:05:24,071 | INFO     | --------------------------------------------------
[2025-07-25 23:35:31] 2025-07-25 15:05:24,071 | INFO     | PanDA job id: 6744921529
[2025-07-25 23:35:31] 2025-07-25 15:05:24,071 | INFO     | task id: 45743349
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | errors: (none)
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | pilot state: finished 
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | transexitcode: 0
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | exeerrorcode: 0
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | exeerrordiag: 
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | exitcode: 0
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | exitmsg: OK
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | cpuconsumptiontime: 61349 s
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | nevents: 400
[2025-07-25 23:35:31] 2025-07-25 15:05:24,072 | INFO     | neventsw: 0
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | pid: 5189
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | pgrp: 5189
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | corecount: 8
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | event service: False
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | sizes: {0: 2397470, 1: 2397470, 11: 2397760, 12: 2397788, 15921: 2428782, 15925: 2437966, 16026: 2438104}
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | --------------------------------------------------
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | 
[2025-07-25 23:35:31] 2025-07-25 15:05:24,073 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-07-25 23:35:31] 2025-07-25 15:05:24,652 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,652 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,652 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,652 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,654 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 23:35:31] 2025-07-25 15:05:24,654 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,654 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 23:35:31] 2025-07-25 15:05:24,654 | INFO     | job 6744921529 has completed (purged errors)
[2025-07-25 23:35:31] 2025-07-25 15:05:24,654 | INFO     | overall cleanup function is called
[2025-07-25 23:35:31] 2025-07-25 15:05:25,664 | INFO     | --- collectZombieJob: --- 10, [5189]
[2025-07-25 23:35:31] 2025-07-25 15:05:25,664 | INFO     | zombie collector waiting for pid 5189
[2025-07-25 23:35:31] 2025-07-25 15:05:25,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 23:35:31] 2025-07-25 15:05:25,664 | INFO     | collected zombie processes
[2025-07-25 23:35:31] 2025-07-25 15:05:25,665 | INFO     | will attempt to kill all subprocesses of pid=5189
[2025-07-25 23:35:31] 2025-07-25 15:05:25,791 | INFO     | process IDs to be killed: [5189] (in reverse order)
[2025-07-25 23:35:31] 2025-07-25 15:05:26,603 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 23:35:31] 2025-07-25 15:05:26,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 23:35:31] 2025-07-25 15:05:26,611 | INFO     | did not find any defunct processes belonging to 5189
[2025-07-25 23:35:31] 2025-07-25 15:05:26,614 | INFO     | did not find any defunct processes belonging to 5189
[2025-07-25 23:35:31] 2025-07-25 15:05:26,614 | INFO     | ready for new job
[2025-07-25 23:35:31] 2025-07-25 15:05:26,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 23:35:31] 2025-07-25 15:05:26,617 | INFO     | ***************************************
[2025-07-25 23:35:31] 2025-07-25 15:05:26,617 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 23:35:31] 2025-07-25 15:05:26,617 | INFO     | ***************************************
[2025-07-25 23:35:31] 2025-07-25 15:05:26,617 | INFO     | 
[2025-07-25 23:35:31] 2025-07-25 15:05:26,618 | INFO     | pilot is running in a VM
[2025-07-25 23:35:31] 2025-07-25 15:05:26,618 | INFO     | architecture information:
[2025-07-25 23:35:31] 2025-07-25 15:05:26,640 | INFO     | executing command: cat /etc/os-release
[2025-07-25 23:35:31] 2025-07-25 15:05:26,808 | INFO     | cat /etc/os-release:
[2025-07-25 23:35:31] NAME="CentOS Linux"
[2025-07-25 23:35:31] VERSION="7 (Core)"
[2025-07-25 23:35:31] ID="centos"
[2025-07-25 23:35:31] ID_LIKE="rhel fedora"
[2025-07-25 23:35:31] VERSION_ID="7"
[2025-07-25 23:35:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 23:35:31] ANSI_COLOR="0;31"
[2025-07-25 23:35:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 23:35:31] HOME_URL="https://www.centos.org/"
[2025-07-25 23:35:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 23:35:31] 
[2025-07-25 23:35:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 23:35:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 23:35:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 23:35:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 23:35:31] 
[2025-07-25 23:35:31] 2025-07-25 15:05:26,808 | INFO     | ***************************************
[2025-07-25 23:35:31] 2025-07-25 15:05:27,312 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-07-25 23:35:31] 2025-07-25 15:05:27,539 | INFO     | sufficient remaining disk space (496555261952 B)
[2025-07-25 23:35:31] 2025-07-25 15:05:27,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 23:35:31] 2025-07-25 15:05:27,540 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 23:35:31] 2025-07-25 15:05:27,540 | INFO     | update_server=False
[2025-07-25 23:35:31] 2025-07-25 15:05:27,540 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 23:35:31] 2025-07-25 15:05:27,541 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 23:35:31] 2025-07-25 15:05:27,889 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 23:35:31] 2025-07-25 15:05:27,889 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 23:35:31] 2025-07-25 15:05:27,889 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:35:31] 2025-07-25 15:05:27,889 | INFO     | will abort loop
[2025-07-25 23:35:31] 2025-07-25 15:05:28,009 | INFO     | all payload control threads have been joined
[2025-07-25 23:35:31] 2025-07-25 15:05:28,409 | INFO     | all job control threads have been joined
[2025-07-25 23:35:31] 2025-07-25 15:05:28,546 | INFO     | [job] retrieve thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:28,642 | INFO     | all data control threads have been joined
[2025-07-25 23:35:31] 2025-07-25 15:05:28,690 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 23:35:31] 2025-07-25 15:05:28,815 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 23:35:31] 2025-07-25 15:05:28,895 | INFO     | [job] job monitor thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,015 | INFO     | [payload] control thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,290 | INFO     | [payload] failed_post thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,376 | INFO     | [payload] validate_post thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,415 | INFO     | [job] control thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,548 | INFO     | [data] copytool_out thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,624 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,649 | INFO     | [data] control thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,794 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,821 | INFO     | [job] queue monitor thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,885 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,918 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,948 | INFO     | [data] copytool_in thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:29,978 | INFO     | [job] validate thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:32,697 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 23:35:31] 2025-07-25 15:05:32,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601073637184)>', '<ExcThread(monitor, started 140600510768896)>']
[2025-07-25 23:35:31] 2025-07-25 15:05:37,882 | INFO     | all workflow threads have been joined
[2025-07-25 23:35:31] 2025-07-25 15:05:37,882 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 23:35:31] 2025-07-25 15:05:37,883 | INFO     | traces error code: 0
[2025-07-25 23:35:31] 2025-07-25 15:05:37,883 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 23:35:31] 2025-07-25 15:05:56,844 | INFO     | PID=30492 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 23:35:31] 2025-07-25 15:05:56,845 | INFO     | .. there are 9 such processes running
[2025-07-25 23:35:31] 2025-07-25 15:05:56,846 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 23:35:31] 2025-07-25 15:05:56,846 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 23:35:31] 2025-07-25 15:05:56,846 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 23:35:31] 2025-07-25 15:05:56,846 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 23:35:31] 2025-07-25 15:05:56,850 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 23:35:31] 2025-07-25 15:05:56,850 | INFO     | [monitor] control thread has ended
[2025-07-25 23:35:31] 2025-07-25 15:05:57,230 [wrapper] ==== pilot stdout END ====
[2025-07-25 23:35:31] 2025-07-25 15:05:57,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 23:35:31] 2025-07-25 15:05:57,378 [wrapper] pilotpid: 30492
[2025-07-25 23:35:31] 2025-07-25 15:05:57,460 [wrapper] Pilot exit status: 0
[2025-07-25 23:35:31] 2025-07-25 15:05:57,757 [wrapper] pandaids: 6744921529
[2025-07-25 23:35:31] 2025-07-25 15:05:58,271 [wrapper] cleanup supervisor_pilot 29586 30493
[2025-07-25 23:35:31] 2025-07-25 15:05:58,360 [wrapper] Test setup, not cleaning
[2025-07-25 23:35:31] 2025-07-25 15:05:58,450 [wrapper] apfmon messages muted
[2025-07-25 23:35:31] 2025-07-25 15:05:58,547 [wrapper] ==== wrapper stdout END ====
[2025-07-25 23:35:31] 2025-07-25 15:05:58,660 [wrapper] ==== wrapper stderr END ====
[2025-07-25 23:35:31]  *** Error codes and diagnostics ***
[2025-07-25 23:35:31]     "exeErrorCode": 0,
[2025-07-25 23:35:31]     "exeErrorDiag": "",
[2025-07-25 23:35:31]     "pilotErrorCode": 0,
[2025-07-25 23:35:31]     "pilotErrorDiag": "",
[2025-07-25 23:35:31]  *** Listing of results directory ***
[2025-07-25 23:35:31] total 432824
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc    530466 Jul 24 20:26 pilot3.tar.gz
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc      5112 Jul 24 20:29 queuedata.json
[2025-07-25 23:35:31] -rwx------. 1 boinc boinc     36292 Jul 24 20:29 runpilot2-wrapper.sh
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc       100 Jul 25 12:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 23:35:31] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 12:37 run_atlas
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc       105 Jul 25 12:37 job.xml
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc      6391 Jul 25 12:37 init_data.xml
[2025-07-25 23:35:31] -rw-r--r--. 2 boinc boinc 229294065 Jul 25 12:37 EVNT.45743347._000311.pool.root.1
[2025-07-25 23:35:31] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:37 start_atlas.sh
[2025-07-25 23:35:31] drwxrwx--x. 2 boinc boinc        68 Jul 25 12:37 shared
[2025-07-25 23:35:31] -rw-r--r--. 2 boinc boinc    542883 Jul 25 12:37 input.tar.gz
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc         0 Jul 25 12:37 boinc_lockfile
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc      2560 Jul 25 12:37 pandaJob.out
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc    979717 Jul 25 12:37 agis_schedconf.cvmfs.json
[2025-07-25 23:35:31] drwx------. 4 boinc boinc      4096 Jul 25 12:37 pilot3
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc 206474082 Jul 25 17:02 HITS.45743349._006003.pool.root.1
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc       530 Jul 25 17:02 boinc_task_state.xml
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc      1020 Jul 25 17:03 memory_monitor_summary.json
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc   1593052 Jul 25 17:03 agis_ddmendpoints.agis.ALL.json
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc    410846 Jul 25 17:03 log.45743349._006003.job.log.tgz.1
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc      7784 Jul 25 17:05 heartbeat.json
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc        95 Jul 25 17:05 pilot_heartbeat.json
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc       890 Jul 25 17:05 pilotlog.txt
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc   1377827 Jul 25 17:05 log.45743349._006003.job.log.1
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc       357 Jul 25 17:06 output.list
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc       620 Jul 25 17:06 runtime_log
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc   1812480 Jul 25 17:06 result.tar.gz
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc      8674 Jul 25 17:06 runtime_log.err
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc       657 Jul 25 17:06 6T1KDmksFz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm4PxKDmfgBZFn.diag
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc      8192 Jul 25 23:35 boinc_mmap_file
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc        28 Jul 25 23:35 wrapper_checkpoint.txt
[2025-07-25 23:35:31] -rw-r--r--. 1 boinc boinc     20564 Jul 25 23:35 stderr.txt
[2025-07-25 23:35:31] HITS file was successfully produced:
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc 206474082 Jul 25 17:02 shared/HITS.pool.root.1
[2025-07-25 23:35:31]  *** Contents of shared directory: ***
[2025-07-25 23:35:31] total 427876
[2025-07-25 23:35:31] -rw-r--r--. 2 boinc boinc 229294065 Jul 25 12:37 ATLAS.root_0
[2025-07-25 23:35:31] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:37 start_atlas.sh
[2025-07-25 23:35:31] -rw-r--r--. 2 boinc boinc    542883 Jul 25 12:37 input.tar.gz
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc 206474082 Jul 25 17:02 HITS.pool.root.1
[2025-07-25 23:35:31] -rw-------. 1 boinc boinc   1812480 Jul 25 17:06 result.tar.gz
23:35:33 (26477): run_atlas exited; CPU time 61564.898511
23:35:33 (26477): called boinc_finish(0)

</stderr_txt>
]]>

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