Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:28:17 (1800410): wrapper (7.7.26015): starting
14:28:17 (1800410): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 14:28:17] Arguments: --nthreads 12
[2025-07-24 14:28:17] Threads: 12
[2025-07-24 14:28:17] Checking for CVMFS
[2025-07-24 14:28:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 14:28:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 14:28:17] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 14:28:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 14:28:18] 2.11.5.0 6885 33364 346668 148716 3 450 36504990 45568000 19709 130560 0 269775479 99.771 187918070 23998 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-24 14:28:18] CVMFS is ok
[2025-07-24 14:28:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 14:28:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 14:28:18] Further information can be found at the LHC@home message board.
[2025-07-24 14:28:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 14:28:18] Checking for apptainer binary...
[2025-07-24 14:28:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 14:28:18] Running /usr/bin/apptainer --version
[2025-07-24 14:28:18] apptainer version 1.4.1-1.el9
[2025-07-24 14:28:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 14:28:18] wns0076.triumf.lcg
[2025-07-24 14:28:18] apptainer works
[2025-07-24 14:28:18] Set ATHENA_PROC_NUMBER=12
[2025-07-24 14:28:18] Set ATHENA_CORE_NUMBER=12
[2025-07-24 14:28:18] Starting ATLAS job with PandaID=6744927041
[2025-07-24 14:28:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 14:31:33]  *** The last 200 lines of the pilot log: ***
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | found no stored workdir sizes
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | WARNING  | wrong length of table data, x=[1753392541.0], y=[1085.0] (must be same and length>=4)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | could have reported an average CPU frequency of 2590 MHz (4 samples)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | ..............................
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . Timing measurements:
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . get job = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . initial setup = 2 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . payload setup = 6 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . stage-in = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . payload execution = 19 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . stage-out = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . log creation = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | ..............................
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 14:31:33] 2025-07-24 21:31:18,027 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744927041/pilotlog.txt
[2025-07-24 14:31:33] 2025-07-24 21:31:18,038 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 14:31:33] - Log from pilotlog.txt -
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | found no stored workdir sizes
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | WARNING  | wrong length of table data, x=[1753392541.0], y=[1085.0] (must be same and length>=4)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | could have reported an average CPU frequency of 2590 MHz (4 samples)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | ..............................
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . Timing measurements:
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . get job = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . initial setup = 2 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . payload setup = 6 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . stage-in = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . payload execution = 19 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . stage-out = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . log creation = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | ..............................
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 14:31:33] 2025-07-24 21:31:18,027 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744927041/pilotlog.txt
[2025-07-24 14:31:33] 2025-07-24 21:31:18,039 | WARNING  | 
[2025-07-24 14:31:33] [begin log extracts]
[2025-07-24 14:31:33] - Log from pilotlog.txt -
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | WARNING  | found no stored workdir sizes
[2025-07-24 14:31:33] 2025-07-24 21:31:18,025 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | WARNING  | wrong length of table data, x=[1753392541.0], y=[1085.0] (must be same and length>=4)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | could have reported an average CPU frequency of 2590 MHz (4 samples)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | ..............................
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . Timing measurements:
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . get job = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . initial setup = 2 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . payload setup = 6 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . stage-in = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . payload execution = 19 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . stage-out = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | . log creation = 0 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | ..............................
[2025-07-24 14:31:33] 2025-07-24 21:31:18,026 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 14:31:33] 2025-07-24 21:31:18,027 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744927041/pilotlog.txt
[2025-07-24 14:31:33] [end log extracts]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,039 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,039 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 14:31:33] 2025-07-24 21:31:18,099 | INFO     | 
[2025-07-24 14:31:33] 2025-07-24 21:31:18,099 | INFO     | job summary report
[2025-07-24 14:31:33] 2025-07-24 21:31:18,099 | INFO     | --------------------------------------------------
[2025-07-24 14:31:33] 2025-07-24 21:31:18,099 | INFO     | PanDA job id: 6744927041
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | task id: 45743349
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 14:29:10,613 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | pilot state: failed 
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | transexitcode: 65
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | exeerrorcode: 65
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | exitcode: 65
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | cpuconsumptiontime: 17 s
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | nevents: 0
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | neventsw: 0
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | pid: 1810299
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | pgrp: 1810299
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | corecount: 12
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | event service: False
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | sizes: {0: 2397295, 1: 2397494, 8: 2397756, 11: 2397784, 30: 2420980, 31: 2425404, 150: 2425542}
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | --------------------------------------------------
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | 
[2025-07-24 14:31:33] 2025-07-24 21:31:18,100 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 14:31:33] 2025-07-24 21:31:18,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 14:31:33] 2025-07-24 21:31:18,116 | INFO     | job 6744927041 has completed (purged errors)
[2025-07-24 14:31:33] 2025-07-24 21:31:18,116 | INFO     | overall cleanup function is called
[2025-07-24 14:31:33] 2025-07-24 21:31:19,122 | INFO     | --- collectZombieJob: --- 10, [1810299]
[2025-07-24 14:31:33] 2025-07-24 21:31:19,122 | INFO     | zombie collector waiting for pid 1810299
[2025-07-24 14:31:33] 2025-07-24 21:31:19,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 14:31:33] 2025-07-24 21:31:19,123 | INFO     | collected zombie processes
[2025-07-24 14:31:33] 2025-07-24 21:31:19,123 | INFO     | will attempt to kill all subprocesses of pid=1810299
[2025-07-24 14:31:33] 2025-07-24 21:31:19,311 | INFO     | process IDs to be killed: [1810299] (in reverse order)
[2025-07-24 14:31:33] 2025-07-24 21:31:19,385 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 14:31:33] 2025-07-24 21:31:19,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 14:31:33] 2025-07-24 21:31:19,394 | INFO     | did not find any defunct processes belonging to 1810299
[2025-07-24 14:31:33] 2025-07-24 21:31:19,402 | INFO     | did not find any defunct processes belonging to 1810299
[2025-07-24 14:31:33] 2025-07-24 21:31:19,402 | INFO     | ready for new job
[2025-07-24 14:31:33] 2025-07-24 21:31:19,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 14:31:33] 2025-07-24 21:31:19,404 | INFO     | ***************************************
[2025-07-24 14:31:33] 2025-07-24 21:31:19,404 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 14:31:33] 2025-07-24 21:31:19,404 | INFO     | ***************************************
[2025-07-24 14:31:33] 2025-07-24 21:31:19,404 | INFO     | 
[2025-07-24 14:31:33] 2025-07-24 21:31:19,406 | INFO     | architecture information:
[2025-07-24 14:31:33] 2025-07-24 21:31:19,406 | INFO     | executing command: cat /etc/os-release
[2025-07-24 14:31:33] 2025-07-24 21:31:19,423 | INFO     | cat /etc/os-release:
[2025-07-24 14:31:33] NAME="CentOS Linux"
[2025-07-24 14:31:33] VERSION="7 (Core)"
[2025-07-24 14:31:33] ID="centos"
[2025-07-24 14:31:33] ID_LIKE="rhel fedora"
[2025-07-24 14:31:33] VERSION_ID="7"
[2025-07-24 14:31:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 14:31:33] ANSI_COLOR="0;31"
[2025-07-24 14:31:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 14:31:33] HOME_URL="https://www.centos.org/"
[2025-07-24 14:31:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 14:31:33] 
[2025-07-24 14:31:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 14:31:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 14:31:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 14:31:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 14:31:33] 
[2025-07-24 14:31:33] 2025-07-24 21:31:19,423 | INFO     | ***************************************
[2025-07-24 14:31:33] 2025-07-24 21:31:19,926 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 14:31:33] 2025-07-24 21:31:19,938 | INFO     | sufficient remaining disk space (2028883410944 B)
[2025-07-24 14:31:33] 2025-07-24 21:31:19,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 14:31:33] 2025-07-24 21:31:19,939 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 14:31:33] 2025-07-24 21:31:19,939 | INFO     | update_server=False
[2025-07-24 14:31:33] 2025-07-24 21:31:19,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 14:31:33] 2025-07-24 21:31:19,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 14:31:33] 2025-07-24 21:31:19,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 14:31:33] 2025-07-24 21:31:19,940 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-24 14:31:33] 2025-07-24 21:31:19,940 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 14:31:33] 2025-07-24 21:31:19,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 14:31:33] 2025-07-24 21:31:19,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 14:31:33] 2025-07-24 21:31:20,069 | INFO     | all data control threads have been joined
[2025-07-24 14:31:33] 2025-07-24 21:31:20,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 14:31:33] 2025-07-24 21:31:20,355 | INFO     | aborting loop
[2025-07-24 14:31:33] 2025-07-24 21:31:20,942 | INFO     | [job] retrieve thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:20,944 | INFO     | [job] queue monitor thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:20,945 | INFO     | all payload control threads have been joined
[2025-07-24 14:31:33] 2025-07-24 21:31:21,060 | INFO     | [payload] validate_post thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,074 | INFO     | [data] control thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,307 | INFO     | all job control threads have been joined
[2025-07-24 14:31:33] 2025-07-24 21:31:21,358 | INFO     | [job] job monitor thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,531 | INFO     | [payload] failed_post thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,653 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,716 | INFO     | [job] validate thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,934 | INFO     | [data] copytool_in thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,935 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,944 | INFO     | [data] copytool_out thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:21,950 | INFO     | [payload] control thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:22,027 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:22,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 14:31:33] 2025-07-24 21:31:22,309 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:22,312 | INFO     | [job] control thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:26,281 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 14:31:33] 2025-07-24 21:31:28,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660104501056)>', '<ExcThread(monitor, started 139659560601344)>']
[2025-07-24 14:31:33] 2025-07-24 21:31:28,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 14:31:33] 2025-07-24 21:31:28,983 | INFO     | [monitor] control thread has ended
[2025-07-24 14:31:33] 2025-07-24 21:31:33,248 | INFO     | all workflow threads have been joined
[2025-07-24 14:31:33] 2025-07-24 21:31:33,249 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 14:31:33] 2025-07-24 21:31:33,249 | INFO     | traces error code: 0
[2025-07-24 14:31:33] 2025-07-24 21:31:33,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 14:31:33] 2025-07-24 21:31:33,372 [wrapper] ==== pilot stdout END ====
[2025-07-24 14:31:33] 2025-07-24 21:31:33,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 14:31:33] 2025-07-24 21:31:33,376 [wrapper] pilotpid: 1803980
[2025-07-24 14:31:33] 2025-07-24 21:31:33,378 [wrapper] Pilot exit status: 0
[2025-07-24 14:31:33] 2025-07-24 21:31:33,385 [wrapper] pandaids: 6744927041
[2025-07-24 14:31:33] 2025-07-24 21:31:33,432 [wrapper] cleanup supervisor_pilot 1803986 1803981
[2025-07-24 14:31:33] 2025-07-24 21:31:33,435 [wrapper] Test setup, not cleaning
[2025-07-24 14:31:33] 2025-07-24 21:31:33,437 [wrapper] apfmon messages muted
[2025-07-24 14:31:33] 2025-07-24 21:31:33,439 [wrapper] ==== wrapper stdout END ====
[2025-07-24 14:31:33] 2025-07-24 21:31:33,441 [wrapper] ==== wrapper stderr END ====
[2025-07-24 14:31:33]  *** Error codes and diagnostics ***
[2025-07-24 14:31:33]     "exeErrorCode": 65,
[2025-07-24 14:31:33]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 14:31:33]     "pilotErrorCode": 1305,
[2025-07-24 14:31:33]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 14:31:33]  *** Listing of results directory ***
[2025-07-24 14:31:33] total 145844
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc    530466 Jul 24 12:13 pilot3.tar.gz
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc      5112 Jul 24 12:46 queuedata.json
[2025-07-24 14:31:33] -rwx------. 1 boinc boinc     36292 Jul 24 12:46 runpilot2-wrapper.sh
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc       100 Jul 24 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 14:31:33] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 14:28 run_atlas
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc       105 Jul 24 14:28 job.xml
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc      6595 Jul 24 14:28 init_data.xml
[2025-07-24 14:31:33] -rw-r--r--. 2 boinc boinc 145271717 Jul 24 14:28 EVNT.45743347._000431.pool.root.1
[2025-07-24 14:31:33] -rw-r--r--. 2 boinc boinc     15095 Jul 24 14:28 start_atlas.sh
[2025-07-24 14:31:33] drwxrwx--x. 2 boinc boinc      4096 Jul 24 14:28 shared
[2025-07-24 14:31:33] -rw-r--r--. 2 boinc boinc    542883 Jul 24 14:28 input.tar.gz
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc         0 Jul 24 14:28 boinc_lockfile
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc      2560 Jul 24 14:28 pandaJob.out
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc    979701 Jul 24 14:28 agis_schedconf.cvmfs.json
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc   1593052 Jul 24 14:28 agis_ddmendpoints.agis.ALL.json
[2025-07-24 14:31:33] drwx------. 4 boinc boinc      4096 Jul 24 14:28 pilot3
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc       522 Jul 24 14:29 boinc_task_state.xml
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc       956 Jul 24 14:29 memory_monitor_summary.json
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc     20827 Jul 24 14:29 log.45743349._008235.job.log.tgz.1
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc        95 Jul 24 14:30 pilot_heartbeat.json
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc      8375 Jul 24 14:31 heartbeat.json
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc      8192 Jul 24 14:31 boinc_mmap_file
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc        22 Jul 24 14:31 wrapper_checkpoint.txt
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc      4479 Jul 24 14:31 pilotlog.txt
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc     74403 Jul 24 14:31 log.45743349._008235.job.log.1
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc       188 Jul 24 14:31 output.list
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc       620 Jul 24 14:31 runtime_log
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc    112640 Jul 24 14:31 result.tar.gz
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc      8485 Jul 24 14:31 runtime_log.err
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc       645 Jul 24 14:31 HXHMDmq4Gz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6fxKDmsh0wBn.diag
[2025-07-24 14:31:33] -rw-r--r--. 1 boinc boinc     21563 Jul 24 14:31 stderr.txt
[2025-07-24 14:31:33] No HITS result produced
[2025-07-24 14:31:33]  *** Contents of shared directory: ***
[2025-07-24 14:31:33] total 142532
[2025-07-24 14:31:33] -rw-r--r--. 2 boinc boinc 145271717 Jul 24 14:28 ATLAS.root_0
[2025-07-24 14:31:33] -rw-r--r--. 2 boinc boinc     15095 Jul 24 14:28 start_atlas.sh
[2025-07-24 14:31:33] -rw-r--r--. 2 boinc boinc    542883 Jul 24 14:28 input.tar.gz
[2025-07-24 14:31:33] -rw-------. 1 boinc boinc    112640 Jul 24 14:31 result.tar.gz
14:31:35 (1800410): run_atlas exited; CPU time 21.345179
14:31:35 (1800410): called boinc_finish(0)

</stderr_txt>
]]>

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