Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:56:27 (2071150): wrapper (7.7.26015): starting
12:56:27 (2071150): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 12:56:27] Arguments: --nthreads 4
[2025-07-27 12:56:27] Threads: 4
[2025-07-27 12:56:27] Checking for CVMFS
[2025-07-27 12:56:27] No cvmfs_config command found, will try listing directly
[2025-07-27 12:56:27] CVMFS is ok
[2025-07-27 12:56:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 12:56:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 12:56:27] Further information can be found at the LHC@home message board.
[2025-07-27 12:56:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 12:56:27] Checking for apptainer binary...
[2025-07-27 12:56:27] which: no apptainer in ((null))
[2025-07-27 12:56:27] apptainer is not installed, using version from CVMFS
[2025-07-27 12:56:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 12:56:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-07-27 12:56:28] apptainer works
[2025-07-27 12:56:28] Set ATHENA_PROC_NUMBER=4
[2025-07-27 12:56:28] Set ATHENA_CORE_NUMBER=4
[2025-07-27 12:56:28] Starting ATLAS job with PandaID=6744926026
[2025-07-27 12:56:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:10:26 (2207574): wrapper (7.7.26015): starting
14:10:26 (2207574): wrapper: running run_atlas (--nthreads 4)
[2025-07-27 14:10:26] Arguments: --nthreads 4
[2025-07-27 14:10:26] Threads: 4
[2025-07-27 14:10:26] This job has been restarted, cleaning up previous attempt
[2025-07-27 14:10:26] Checking for CVMFS
[2025-07-27 14:10:26] No cvmfs_config command found, will try listing directly
[2025-07-27 14:10:26] CVMFS is ok
[2025-07-27 14:10:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-27 14:10:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-27 14:10:26] Further information can be found at the LHC@home message board.
[2025-07-27 14:10:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-27 14:10:26] Checking for apptainer binary...
[2025-07-27 14:10:26] which: no apptainer in ((null))
[2025-07-27 14:10:26] apptainer is not installed, using version from CVMFS
[2025-07-27 14:10:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-27 14:10:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-07-27 14:10:26] apptainer works
[2025-07-27 14:10:26] Set ATHENA_PROC_NUMBER=4
[2025-07-27 14:10:26] Set ATHENA_CORE_NUMBER=4
[2025-07-27 14:10:26] Starting ATLAS job with PandaID=6744926026
[2025-07-27 14:10:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-27 17:43:42]  *** The last 200 lines of the pilot log: ***
[2025-07-27 17:43:42] 2025-07-27 15:43:09,715 | INFO     | extracted standard memory fields from prmon json
[2025-07-27 17:43:42] 2025-07-27 15:43:09,715 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-27 17:43:42] 2025-07-27 15:43:09,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-27 17:43:42] 2025-07-27 15:43:09,716 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-27 17:43:42] 2025-07-27 15:43:09,720 | INFO     | fitting pss+swap vs Time
[2025-07-27 17:43:42] 2025-07-27 15:43:09,721 | INFO     | sum of square deviations: 2830787960.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,722 | INFO     | sum of deviations: 18092321291.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,722 | INFO     | mean x: 1753624608.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,722 | INFO     | mean y: 2317755.5645933016
[2025-07-27 17:43:42] 2025-07-27 15:43:09,722 | INFO     | -- intersect: -11205565095.449062
[2025-07-27 17:43:42] 2025-07-27 15:43:09,722 | INFO     | intersect: -11205565095.449062
[2025-07-27 17:43:42] 2025-07-27 15:43:09,723 | INFO     | chi2: 2.3661918988346793
[2025-07-27 17:43:42] 2025-07-27 15:43:09,723 | INFO     | sum of square deviations: 2632440055.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,724 | INFO     | sum of deviations: 30486474439.499996
[2025-07-27 17:43:42] 2025-07-27 15:43:09,724 | INFO     | mean x: 1753624455.5
[2025-07-27 17:43:42] 2025-07-27 15:43:09,724 | INFO     | mean y: 2327091.6715686275
[2025-07-27 17:43:42] 2025-07-27 15:43:09,724 | INFO     | -- intersect: -20306521741.386795
[2025-07-27 17:43:42] 2025-07-27 15:43:09,724 | INFO     | intersect: -20306521741.386795
[2025-07-27 17:43:42] 2025-07-27 15:43:09,725 | INFO     | chi2: 1.5957553397507134
[2025-07-27 17:43:42] 2025-07-27 15:43:09,725 | INFO     | current chi2=1.5957553397507134 (change=32.56018919950645 %)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,725 | INFO     | sum of square deviations: 2443580700.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,726 | INFO     | sum of deviations: 29698738465.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,726 | INFO     | mean x: 1753624303.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,727 | INFO     | mean y: 2326455.5326633165
[2025-07-27 17:43:42] 2025-07-27 15:43:09,727 | INFO     | -- intersect: -21310834816.638508
[2025-07-27 17:43:42] 2025-07-27 15:43:09,727 | INFO     | intersect: -21310834816.638508
[2025-07-27 17:43:42] 2025-07-27 15:43:09,727 | INFO     | chi2: 1.5966208669476532
[2025-07-27 17:43:42] 2025-07-27 15:43:09,727 | INFO     | current chi2=1.5966208669476532 (change=-0.05423934204569143 %)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,727 | INFO     | right removable region: 198
[2025-07-27 17:43:42] 2025-07-27 15:43:09,727 | INFO     | sum of square deviations: 2632440055.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,729 | INFO     | sum of deviations: -14855705577.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,729 | INFO     | mean x: 1753624760.5
[2025-07-27 17:43:42] 2025-07-27 15:43:09,729 | INFO     | mean y: 2342846.9901960786
[2025-07-27 17:43:42] 2025-07-27 15:43:09,729 | INFO     | -- intersect: 9898611172.281706
[2025-07-27 17:43:42] 2025-07-27 15:43:09,729 | INFO     | intersect: 9898611172.281706
[2025-07-27 17:43:42] 2025-07-27 15:43:09,729 | INFO     | chi2: 0.806697915020212
[2025-07-27 17:43:42] 2025-07-27 15:43:09,729 | INFO     | current chi2=0.806697915020212 (change=65.907333407003 %)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,730 | INFO     | sum of square deviations: 2443580700.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | sum of deviations: -16759774217.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | mean x: 1753624913.0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | mean y: 2344365.7587939696
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | -- intersect: 12029922420.858946
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | intersect: 12029922420.858946
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | chi2: 0.7965234057856686
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | current chi2=0.7965234057856686 (change=1.2612539396842886 %)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,732 | INFO     | left removable region: 20
[2025-07-27 17:43:42] 2025-07-27 15:43:09,733 | INFO     | sum of square deviations: 1748737904.5
[2025-07-27 17:43:42] 2025-07-27 15:43:09,734 | INFO     | sum of deviations: -4595432041.5
[2025-07-27 17:43:42] 2025-07-27 15:43:09,734 | INFO     | mean x: 1753624882.5
[2025-07-27 17:43:42] 2025-07-27 15:43:09,734 | INFO     | mean y: 2355471.9606741574
[2025-07-27 17:43:42] 2025-07-27 15:43:09,734 | INFO     | -- intersect: 4610629789.727184
[2025-07-27 17:43:42] 2025-07-27 15:43:09,734 | INFO     | intersect: 4610629789.727184
[2025-07-27 17:43:42] 2025-07-27 15:43:09,734 | INFO     | chi2: 0.004136019831138903
[2025-07-27 17:43:42] 2025-07-27 15:43:09,734 | INFO     | -- intersect: 4610629789.727184
[2025-07-27 17:43:42] 2025-07-27 15:43:09,735 | INFO     | current memory leak: -2.63 B/s (using 178 data points, chi2=0.00)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,735 | INFO     | could have reported an average CPU frequency of 2568 MHz (11 samples)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,735 | INFO     | ..............................
[2025-07-27 17:43:42] 2025-07-27 15:43:09,735 | INFO     | . Timing measurements:
[2025-07-27 17:43:42] 2025-07-27 15:43:09,735 | INFO     | . get job = 0 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,735 | INFO     | . initial setup = 0 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,736 | INFO     | . payload setup = 6 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,736 | INFO     | . stage-in = 0 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,736 | INFO     | . payload execution = 12718 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,736 | INFO     | . stage-out = 1 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,736 | INFO     | . log creation = 0 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,736 | INFO     | ..............................
[2025-07-27 17:43:42] 2025-07-27 15:43:09,839 | INFO     | 
[2025-07-27 17:43:42] 2025-07-27 15:43:09,839 | INFO     | job summary report
[2025-07-27 17:43:42] 2025-07-27 15:43:09,839 | INFO     | --------------------------------------------------
[2025-07-27 17:43:42] 2025-07-27 15:43:09,839 | INFO     | PanDA job id: 6744926026
[2025-07-27 17:43:42] 2025-07-27 15:43:09,839 | INFO     | task id: 45743349
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | errors: (none)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | pilot state: finished 
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | transexitcode: 0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | exeerrorcode: 0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | exeerrordiag: 
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | exitcode: 0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | exitmsg: OK
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | cpuconsumptiontime: 48971 s
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | nevents: 400
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | neventsw: 0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | pid: 2228044
[2025-07-27 17:43:42] 2025-07-27 15:43:09,840 | INFO     | pgrp: 2228044
[2025-07-27 17:43:42] 2025-07-27 15:43:09,841 | INFO     | corecount: 4
[2025-07-27 17:43:42] 2025-07-27 15:43:09,841 | INFO     | event service: False
[2025-07-27 17:43:42] 2025-07-27 15:43:09,841 | INFO     | sizes: {0: 2396641, 1: 2397508, 5: 2397770, 12: 2397826, 12728: 2427907, 12729: 2427906, 12731: 2437166, 12737: 2437304}
[2025-07-27 17:43:42] 2025-07-27 15:43:09,841 | INFO     | --------------------------------------------------
[2025-07-27 17:43:42] 2025-07-27 15:43:09,841 | INFO     | 
[2025-07-27 17:43:42] 2025-07-27 15:43:09,841 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-07-27 17:43:42] 2025-07-27 15:43:09,862 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,862 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,862 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,862 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,864 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,864 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-27 17:43:42] 2025-07-27 15:43:09,864 | INFO     | job 6744926026 has completed (purged errors)
[2025-07-27 17:43:42] 2025-07-27 15:43:09,864 | INFO     | overall cleanup function is called
[2025-07-27 17:43:42] 2025-07-27 15:43:10,871 | INFO     | --- collectZombieJob: --- 10, [2228044]
[2025-07-27 17:43:42] 2025-07-27 15:43:10,872 | INFO     | zombie collector waiting for pid 2228044
[2025-07-27 17:43:42] 2025-07-27 15:43:10,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-27 17:43:42] 2025-07-27 15:43:10,872 | INFO     | collected zombie processes
[2025-07-27 17:43:42] 2025-07-27 15:43:10,872 | INFO     | will attempt to kill all subprocesses of pid=2228044
[2025-07-27 17:43:42] 2025-07-27 15:43:11,200 | INFO     | process IDs to be killed: [2228044] (in reverse order)
[2025-07-27 17:43:42] 2025-07-27 15:43:11,307 | WARNING  | found no corresponding commands to process id(s)
[2025-07-27 17:43:42] 2025-07-27 15:43:11,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-27 17:43:42] 2025-07-27 15:43:11,317 | INFO     | did not find any defunct processes belonging to 2228044
[2025-07-27 17:43:42] 2025-07-27 15:43:11,327 | INFO     | did not find any defunct processes belonging to 2228044
[2025-07-27 17:43:42] 2025-07-27 15:43:11,327 | INFO     | ready for new job
[2025-07-27 17:43:42] 2025-07-27 15:43:11,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-27 17:43:42] 2025-07-27 15:43:11,329 | INFO     | ***************************************
[2025-07-27 17:43:42] 2025-07-27 15:43:11,329 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-27 17:43:42] 2025-07-27 15:43:11,329 | INFO     | ***************************************
[2025-07-27 17:43:42] 2025-07-27 15:43:11,329 | INFO     | 
[2025-07-27 17:43:42] 2025-07-27 15:43:11,333 | INFO     | architecture information:
[2025-07-27 17:43:42] 2025-07-27 15:43:11,333 | INFO     | executing command: cat /etc/os-release
[2025-07-27 17:43:42] 2025-07-27 15:43:11,347 | INFO     | cat /etc/os-release:
[2025-07-27 17:43:42] NAME="CentOS Linux"
[2025-07-27 17:43:42] VERSION="7 (Core)"
[2025-07-27 17:43:42] ID="centos"
[2025-07-27 17:43:42] ID_LIKE="rhel fedora"
[2025-07-27 17:43:42] VERSION_ID="7"
[2025-07-27 17:43:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-27 17:43:42] ANSI_COLOR="0;31"
[2025-07-27 17:43:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-27 17:43:42] HOME_URL="https://www.centos.org/"
[2025-07-27 17:43:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-27 17:43:42] 
[2025-07-27 17:43:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-27 17:43:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-27 17:43:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-27 17:43:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-27 17:43:42] 
[2025-07-27 17:43:42] 2025-07-27 15:43:11,347 | INFO     | ***************************************
[2025-07-27 17:43:42] 2025-07-27 15:43:11,850 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-07-27 17:43:42] 2025-07-27 15:43:11,865 | INFO     | sufficient remaining disk space (642396454912 B)
[2025-07-27 17:43:42] 2025-07-27 15:43:11,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-27 17:43:42] 2025-07-27 15:43:11,865 | INFO     | current server update state: UPDATING_FINAL
[2025-07-27 17:43:42] 2025-07-27 15:43:11,865 | INFO     | update_server=False
[2025-07-27 17:43:42] 2025-07-27 15:43:11,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-27 17:43:42] 2025-07-27 15:43:11,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-27 17:43:42] 2025-07-27 15:43:11,866 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:43:42] 2025-07-27 15:43:11,866 | INFO     | aborting loop
[2025-07-27 17:43:42] 2025-07-27 15:43:12,296 | INFO     | all payload control threads have been joined
[2025-07-27 17:43:42] 2025-07-27 15:43:12,812 | INFO     | all data control threads have been joined
[2025-07-27 17:43:42] 2025-07-27 15:43:12,871 | INFO     | [job] retrieve thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:12,871 | INFO     | [job] job monitor thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:12,904 | INFO     | [payload] execute_payloads thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:12,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:13,122 | INFO     | all job control threads have been joined
[2025-07-27 17:43:42] 2025-07-27 15:43:13,302 | INFO     | [payload] control thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:13,475 | INFO     | [data] copytool_in thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:13,600 | INFO     | [job] validate thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:13,701 | INFO     | [payload] validate_post thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:13,817 | INFO     | [data] control thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:13,871 | INFO     | [data] copytool_out thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:14,094 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-27 17:43:42] 2025-07-27 15:43:14,128 | INFO     | [job] control thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:14,169 | INFO     | [job] create_data_payload thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:14,190 | INFO     | [payload] failed_post thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:14,348 | INFO     | [payload] validate_pre thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:14,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-27 17:43:42] 2025-07-27 15:43:15,854 | INFO     | [job] queue monitor thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:18,100 | INFO     | [data] queue_monitor thread has finished
[2025-07-27 17:43:42] 2025-07-27 15:43:19,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22912258889536)>', '<ExcThread(monitor, started 22912025200384)>']
[2025-07-27 17:43:42] 2025-07-27 15:43:24,802 | INFO     | all workflow threads have been joined
[2025-07-27 17:43:42] 2025-07-27 15:43:24,802 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-27 17:43:42] 2025-07-27 15:43:24,802 | INFO     | traces error code: 0
[2025-07-27 17:43:42] 2025-07-27 15:43:24,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-27 17:43:42] 2025-07-27 15:43:41,775 | INFO     | PID=2213159 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-27 17:43:42] 2025-07-27 15:43:41,775 | INFO     | .. there are 10 such processes running
[2025-07-27 17:43:42] 2025-07-27 15:43:41,777 | INFO     | found 0 job(s) in 20 queues
[2025-07-27 17:43:42] 2025-07-27 15:43:41,777 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-27 17:43:42] 2025-07-27 15:43:41,777 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-27 17:43:42] 2025-07-27 15:43:41,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-27 17:43:42] 2025-07-27 15:43:41,777 | INFO     | [monitor] control thread has ended
[2025-07-27 17:43:42] 2025-07-27 15:43:41,901 [wrapper] ==== pilot stdout END ====
[2025-07-27 17:43:42] 2025-07-27 15:43:41,904 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-27 17:43:42] 2025-07-27 15:43:41,906 [wrapper] pilotpid: 2213159
[2025-07-27 17:43:42] 2025-07-27 15:43:41,909 [wrapper] Pilot exit status: 0
[2025-07-27 17:43:42] 2025-07-27 15:43:41,918 [wrapper] pandaids: 6744926026 6744926026
[2025-07-27 17:43:42] 2025-07-27 15:43:41,980 [wrapper] cleanup supervisor_pilot 2772647 2213160
[2025-07-27 17:43:42] 2025-07-27 15:43:41,983 [wrapper] Test setup, not cleaning
[2025-07-27 17:43:42] 2025-07-27 15:43:41,986 [wrapper] apfmon messages muted
[2025-07-27 17:43:42] 2025-07-27 15:43:41,988 [wrapper] ==== wrapper stdout END ====
[2025-07-27 17:43:42] 2025-07-27 15:43:41,991 [wrapper] ==== wrapper stderr END ====
[2025-07-27 17:43:42]  *** Error codes and diagnostics ***
[2025-07-27 17:43:42]     "exeErrorCode": 0,
[2025-07-27 17:43:42]     "exeErrorDiag": "",
[2025-07-27 17:43:42]     "pilotErrorCode": 0,
[2025-07-27 17:43:42]     "pilotErrorDiag": "",
[2025-07-27 17:43:42]  *** Listing of results directory ***
[2025-07-27 17:43:42] total 655352
[2025-07-27 17:43:42] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc    530466 Jul 24 21:13 pilot3.tar.gz
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc      5112 Jul 24 21:29 queuedata.json
[2025-07-27 17:43:42] -rwx------ 1 boinc boinc     36292 Jul 24 21:30 runpilot2-wrapper.sh
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc       100 Jul 27 12:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-27 17:43:42] -rwxr-xr-x 1 boinc boinc      7986 Jul 27 12:56 run_atlas
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc       105 Jul 27 12:56 job.xml
[2025-07-27 17:43:42] -rw-r--r-- 3 boinc boinc 227972706 Jul 27 12:56 EVNT.45743347._000405.pool.root.1
[2025-07-27 17:43:42] -rw-r--r-- 3 boinc boinc 227972706 Jul 27 12:56 ATLAS.root_0
[2025-07-27 17:43:42] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:56 start_atlas.sh
[2025-07-27 17:43:42] drwxrwx--x 2 boinc boinc      4096 Jul 27 12:56 shared
[2025-07-27 17:43:42] -rw-r--r-- 2 boinc boinc    542879 Jul 27 12:56 input.tar.gz
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc         0 Jul 27 12:56 boinc_lockfile
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc      6640 Jul 27 14:10 init_data.xml
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc      2560 Jul 27 14:10 pandaJob.out
[2025-07-27 17:43:42] -rw------- 1 boinc boinc    980109 Jul 27 14:10 agis_schedconf.cvmfs.json
[2025-07-27 17:43:42] -rw------- 1 boinc boinc 208197025 Jul 27 17:42 HITS.45743349._007753.pool.root.1
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc       529 Jul 27 17:42 boinc_task_state.xml
[2025-07-27 17:43:42] -rw------- 1 boinc boinc      1039 Jul 27 17:42 memory_monitor_summary.json
[2025-07-27 17:43:42] -rw------- 1 boinc boinc   1593052 Jul 27 17:43 agis_ddmendpoints.agis.ALL.json
[2025-07-27 17:43:42] -rw------- 1 boinc boinc    325123 Jul 27 17:43 log.45743349._007753.job.log.tgz.1
[2025-07-27 17:43:42] -rw------- 1 boinc boinc      7833 Jul 27 17:43 heartbeat.json
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc      8192 Jul 27 17:43 boinc_mmap_file
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc        27 Jul 27 17:43 wrapper_checkpoint.txt
[2025-07-27 17:43:42] -rw------- 1 boinc boinc        97 Jul 27 17:43 pilot_heartbeat.json
[2025-07-27 17:43:42] -rw------- 1 boinc boinc       823 Jul 27 17:43 pilotlog.txt
[2025-07-27 17:43:42] -rw------- 1 boinc boinc   1199396 Jul 27 17:43 log.45743349._007753.job.log.1
[2025-07-27 17:43:42] -rw------- 1 boinc boinc       357 Jul 27 17:43 output.list
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc       620 Jul 27 17:43 runtime_log
[2025-07-27 17:43:42] -rw------- 1 boinc boinc   1546240 Jul 27 17:43 result.tar.gz
[2025-07-27 17:43:42] -rw------- 1 boinc boinc       790 Jul 27 17:43 tfXKDmMpGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5LNLDmk2E6fm.diag
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc      9104 Jul 27 17:43 runtime_log.err
[2025-07-27 17:43:42] -rw-r--r-- 1 boinc boinc     22603 Jul 27 17:43 stderr.txt
[2025-07-27 17:43:42] HITS file was successfully produced:
[2025-07-27 17:43:42] -rw------- 1 boinc boinc 208197025 Jul 27 17:42 shared/HITS.pool.root.1
[2025-07-27 17:43:42]  *** Contents of shared directory: ***
[2025-07-27 17:43:42] total 428020
[2025-07-27 17:43:42] -rw-r--r-- 3 boinc boinc 227972706 Jul 27 12:56 ATLAS.root_0
[2025-07-27 17:43:42] -rw-r--r-- 2 boinc boinc     15095 Jul 27 12:56 start_atlas.sh
[2025-07-27 17:43:42] -rw-r--r-- 2 boinc boinc    542879 Jul 27 12:56 input.tar.gz
[2025-07-27 17:43:42] -rw------- 1 boinc boinc 208197025 Jul 27 17:42 HITS.pool.root.1
[2025-07-27 17:43:42] -rw------- 1 boinc boinc   1546240 Jul 27 17:43 result.tar.gz
17:43:43 (2207574): run_atlas exited; CPU time 49405.664447
17:43:43 (2207574): called boinc_finish(0)

</stderr_txt>
]]>

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