Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:43:33 (2984454): wrapper (7.7.26015): starting
13:43:33 (2984454): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 13:43:33] Arguments: --nthreads 8
[2025-07-24 13:43:33] Threads: 8
[2025-07-24 13:43:33] Checking for CVMFS
[2025-07-24 13:43:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 13:43:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 13:43:33] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 13:43:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 13:43:33] 2.11.3.0 21318 475081 150792 148714 3 206 42250094 45568000 14105 130560 0 2535626435 99.765 1988124488 19223 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-07-24 13:43:33] CVMFS is ok
[2025-07-24 13:43:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 13:43:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 13:43:33] Further information can be found at the LHC@home message board.
[2025-07-24 13:43:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 13:43:33] Checking for apptainer binary...
[2025-07-24 13:43:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 13:43:33] Running /usr/bin/apptainer --version
[2025-07-24 13:43:34] apptainer version 1.3.3-1.el9
[2025-07-24 13:43:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 13:43:35] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0024.triumf.lcg
[2025-07-24 13:43:35] apptainer works
[2025-07-24 13:43:35] Set ATHENA_PROC_NUMBER=8
[2025-07-24 13:43:35] Set ATHENA_CORE_NUMBER=8
[2025-07-24 13:43:35] Starting ATLAS job with PandaID=6744925680
[2025-07-24 13:43:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 13:49:17]  *** The last 200 lines of the pilot log: ***
[2025-07-24 13:49:17] 2025-07-24 20:48:43,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 13:49:17] 2025-07-24 20:48:43,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | WARNING  | wrong length of table data, x=[1753389942.0], y=[1226.0] (must be same and length>=4)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | ..............................
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . Timing measurements:
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . get job = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . initial setup = 4 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . payload setup = 25 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . stage-in = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . payload execution = 66 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . stage-out = 2 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | . log creation = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | ..............................
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744925680/pilotlog.txt
[2025-07-24 13:49:17] 2025-07-24 20:48:43,831 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 13:49:17] - Log from pilotlog.txt -
[2025-07-24 13:49:17] 2025-07-24 20:48:43,813 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6744925680/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,814 | INFO     | extracted standard info from prmon json
[2025-07-24 13:49:17] 2025-07-24 20:48:43,814 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 13:49:17] 2025-07-24 20:48:43,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 13:49:17] 2025-07-24 20:48:43,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 13:49:17] 2025-07-24 20:48:43,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | WARNING  | wrong length of table data, x=[1753389942.0], y=[1226.0] (must be same and length>=4)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | ..............................
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . Timing measurements:
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . get job = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . initial setup = 4 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . payload setup = 25 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . stage-in = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . payload execution = 66 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . stage-out = 2 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | . log creation = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | ..............................
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744925680/pilotlog.txt
[2025-07-24 13:49:17] 2025-07-24 20:48:43,832 | WARNING  | 
[2025-07-24 13:49:17] [begin log extracts]
[2025-07-24 13:49:17] - Log from pilotlog.txt -
[2025-07-24 13:49:17] 2025-07-24 20:48:43,813 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6744925680/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,814 | INFO     | extracted standard info from prmon json
[2025-07-24 13:49:17] 2025-07-24 20:48:43,814 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 13:49:17] 2025-07-24 20:48:43,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 13:49:17] 2025-07-24 20:48:43,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 13:49:17] 2025-07-24 20:48:43,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | WARNING  | wrong length of table data, x=[1753389942.0], y=[1226.0] (must be same and length>=4)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | ..............................
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . Timing measurements:
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . get job = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . initial setup = 4 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . payload setup = 25 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . stage-in = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . payload execution = 66 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,816 | INFO     | . stage-out = 2 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | . log creation = 0 s
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | ..............................
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 13:49:17] 2025-07-24 20:48:43,817 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744925680/pilotlog.txt
[2025-07-24 13:49:17] [end log extracts]
[2025-07-24 13:49:17] 2025-07-24 20:48:43,832 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 13:49:17] 2025-07-24 20:48:43,833 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 13:49:17] 2025-07-24 20:48:44,216 | INFO     | 
[2025-07-24 13:49:17] 2025-07-24 20:48:44,216 | INFO     | job summary report
[2025-07-24 13:49:17] 2025-07-24 20:48:44,216 | INFO     | --------------------------------------------------
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | PanDA job id: 6744925680
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | task id: 45743349
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 13:46:13,082 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | pilot state: failed 
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | transexitcode: 65
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | exeerrorcode: 65
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | exitcode: 65
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | cpuconsumptiontime: 18 s
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | nevents: 0
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | neventsw: 0
[2025-07-24 13:49:17] 2025-07-24 20:48:44,217 | INFO     | pid: 3001580
[2025-07-24 13:49:17] 2025-07-24 20:48:44,218 | INFO     | pgrp: 3001580
[2025-07-24 13:49:17] 2025-07-24 20:48:44,218 | INFO     | corecount: 8
[2025-07-24 13:49:17] 2025-07-24 20:48:44,218 | INFO     | event service: False
[2025-07-24 13:49:17] 2025-07-24 20:48:44,218 | INFO     | sizes: {0: 2397296, 1: 2397495, 12: 2397495, 18: 2397785, 23: 2397813, 96: 2421117, 97: 2421221, 100: 2425541, 101: 2425569, 230: 2425735}
[2025-07-24 13:49:17] 2025-07-24 20:48:44,218 | INFO     | --------------------------------------------------
[2025-07-24 13:49:17] 2025-07-24 20:48:44,218 | INFO     | 
[2025-07-24 13:49:17] 2025-07-24 20:48:44,218 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 13:49:17] 2025-07-24 20:48:44,235 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | job 6744925680 has completed (purged errors)
[2025-07-24 13:49:17] 2025-07-24 20:48:44,237 | INFO     | overall cleanup function is called
[2025-07-24 13:49:17] 2025-07-24 20:48:45,246 | INFO     | --- collectZombieJob: --- 10, [3001580]
[2025-07-24 13:49:17] 2025-07-24 20:48:45,246 | INFO     | zombie collector waiting for pid 3001580
[2025-07-24 13:49:17] 2025-07-24 20:48:45,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 13:49:17] 2025-07-24 20:48:45,247 | INFO     | collected zombie processes
[2025-07-24 13:49:17] 2025-07-24 20:48:45,247 | INFO     | will attempt to kill all subprocesses of pid=3001580
[2025-07-24 13:49:17] 2025-07-24 20:48:46,030 | INFO     | process IDs to be killed: [3001580] (in reverse order)
[2025-07-24 13:49:17] 2025-07-24 20:48:46,463 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 13:49:17] 2025-07-24 20:48:46,464 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 13:49:17] 2025-07-24 20:48:46,482 | INFO     | did not find any defunct processes belonging to 3001580
[2025-07-24 13:49:17] 2025-07-24 20:48:46,504 | INFO     | did not find any defunct processes belonging to 3001580
[2025-07-24 13:49:17] 2025-07-24 20:48:46,504 | INFO     | ready for new job
[2025-07-24 13:49:17] 2025-07-24 20:48:46,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 13:49:17] 2025-07-24 20:48:46,505 | INFO     | ***************************************
[2025-07-24 13:49:17] 2025-07-24 20:48:46,506 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 13:49:17] 2025-07-24 20:48:46,506 | INFO     | ***************************************
[2025-07-24 13:49:17] 2025-07-24 20:48:46,506 | INFO     | 
[2025-07-24 13:49:17] 2025-07-24 20:48:46,521 | INFO     | architecture information:
[2025-07-24 13:49:17] 2025-07-24 20:48:46,524 | INFO     | executing command: cat /etc/os-release
[2025-07-24 13:49:17] 2025-07-24 20:48:46,572 | INFO     | cat /etc/os-release:
[2025-07-24 13:49:17] NAME="CentOS Linux"
[2025-07-24 13:49:17] VERSION="7 (Core)"
[2025-07-24 13:49:17] ID="centos"
[2025-07-24 13:49:17] ID_LIKE="rhel fedora"
[2025-07-24 13:49:17] VERSION_ID="7"
[2025-07-24 13:49:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 13:49:17] ANSI_COLOR="0;31"
[2025-07-24 13:49:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 13:49:17] HOME_URL="https://www.centos.org/"
[2025-07-24 13:49:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 13:49:17] 
[2025-07-24 13:49:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 13:49:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 13:49:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 13:49:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 13:49:17] 
[2025-07-24 13:49:17] 2025-07-24 20:48:46,573 | INFO     | ***************************************
[2025-07-24 13:49:17] 2025-07-24 20:48:47,076 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 13:49:17] 2025-07-24 20:48:47,185 | INFO     | sufficient remaining disk space (1313163182080 B)
[2025-07-24 13:49:17] 2025-07-24 20:48:47,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 13:49:17] 2025-07-24 20:48:47,186 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 13:49:17] 2025-07-24 20:48:47,186 | INFO     | update_server=False
[2025-07-24 13:49:17] 2025-07-24 20:48:47,186 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 13:49:17] 2025-07-24 20:48:47,385 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-24 13:49:17] 2025-07-24 20:48:47,385 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-24 13:49:17] 2025-07-24 20:48:47,385 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 13:49:17] 2025-07-24 20:48:47,386 | INFO     | will abort loop
[2025-07-24 13:49:17] 2025-07-24 20:48:47,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 13:49:17] 2025-07-24 20:48:47,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 13:49:17] 2025-07-24 20:48:47,792 | INFO     | all data control threads have been joined
[2025-07-24 13:49:17] 2025-07-24 20:48:47,849 | INFO     | all job control threads have been joined
[2025-07-24 13:49:17] 2025-07-24 20:48:48,192 | INFO     | [job] retrieve thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,210 | INFO     | all payload control threads have been joined
[2025-07-24 13:49:17] 2025-07-24 20:48:48,248 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,392 | INFO     | [job] job monitor thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,525 | INFO     | [payload] validate_post thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,660 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,695 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,798 | INFO     | [data] control thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,865 | INFO     | [job] control thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:48,959 | INFO     | [data] copytool_in thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:49,216 | INFO     | [payload] control thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:49,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 13:49:17] 2025-07-24 20:48:49,296 | INFO     | [payload] failed_post thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:49,673 | INFO     | [job] validate thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:49,760 | INFO     | [data] copytool_out thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:50,224 | INFO     | [job] queue monitor thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:51,585 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 13:49:17] 2025-07-24 20:48:52,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139715371362112)>', '<ExcThread(monitor, started 139714975737600)>']
[2025-07-24 13:49:17] 2025-07-24 20:48:57,622 | INFO     | all workflow threads have been joined
[2025-07-24 13:49:17] 2025-07-24 20:48:57,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 13:49:17] 2025-07-24 20:48:57,623 | INFO     | traces error code: 0
[2025-07-24 13:49:17] 2025-07-24 20:48:57,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 13:49:17] 2025-07-24 20:49:16,516 | INFO     | PID=2989815 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 13:49:17] 2025-07-24 20:49:16,516 | INFO     | .. there are 26 such processes running
[2025-07-24 13:49:17] 2025-07-24 20:49:16,517 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 13:49:17] 2025-07-24 20:49:16,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 13:49:17] 2025-07-24 20:49:16,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 13:49:17] 2025-07-24 20:49:16,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 13:49:17] 2025-07-24 20:49:16,517 | INFO     | [monitor] control thread has ended
[2025-07-24 13:49:17] 2025-07-24 20:49:16,778 [wrapper] ==== pilot stdout END ====
[2025-07-24 13:49:17] 2025-07-24 20:49:16,794 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 13:49:17] 2025-07-24 20:49:16,820 [wrapper] pilotpid: 2989815
[2025-07-24 13:49:17] 2025-07-24 20:49:16,849 [wrapper] Pilot exit status: 0
[2025-07-24 13:49:17] 2025-07-24 20:49:17,059 [wrapper] pandaids: 6744925680
[2025-07-24 13:49:17] 2025-07-24 20:49:17,318 [wrapper] cleanup supervisor_pilot 2989822 2989816
[2025-07-24 13:49:17] 2025-07-24 20:49:17,324 [wrapper] Test setup, not cleaning
[2025-07-24 13:49:17] 2025-07-24 20:49:17,327 [wrapper] apfmon messages muted
[2025-07-24 13:49:17] 2025-07-24 20:49:17,329 [wrapper] ==== wrapper stdout END ====
[2025-07-24 13:49:17] 2025-07-24 20:49:17,331 [wrapper] ==== wrapper stderr END ====
[2025-07-24 13:49:17]  *** Error codes and diagnostics ***
[2025-07-24 13:49:17]     "exeErrorCode": 65,
[2025-07-24 13:49:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 13:49:17]     "pilotErrorCode": 1305,
[2025-07-24 13:49:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 13:49:17]  *** Listing of results directory ***
[2025-07-24 13:49:17] total 227964
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc    530466 Jul 24 12:13 pilot3.tar.gz
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc      5112 Jul 24 12:24 queuedata.json
[2025-07-24 13:49:17] -rwx------. 1 boinc boinc     36292 Jul 24 12:25 runpilot2-wrapper.sh
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc       100 Jul 24 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 13:49:17] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 13:43 run_atlas
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc       105 Jul 24 13:43 job.xml
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc      6448 Jul 24 13:43 init_data.xml
[2025-07-24 13:49:17] -rw-r--r--. 2 boinc boinc 229355264 Jul 24 13:43 EVNT.45743347._000395.pool.root.1
[2025-07-24 13:49:17] -rw-r--r--. 2 boinc boinc    542892 Jul 24 13:43 input.tar.gz
[2025-07-24 13:49:17] -rw-r--r--. 2 boinc boinc     15095 Jul 24 13:43 start_atlas.sh
[2025-07-24 13:49:17] drwxrwx--x. 2 boinc boinc      4096 Jul 24 13:43 shared
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc         0 Jul 24 13:43 boinc_lockfile
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc      2561 Jul 24 13:43 pandaJob.out
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc    979701 Jul 24 13:44 agis_schedconf.cvmfs.json
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc   1593052 Jul 24 13:44 agis_ddmendpoints.agis.ALL.json
[2025-07-24 13:49:17] drwx------. 4 boinc boinc      4096 Jul 24 13:44 pilot3
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc       523 Jul 24 13:46 boinc_task_state.xml
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc       974 Jul 24 13:46 memory_monitor_summary.json
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc     21738 Jul 24 13:46 log.45743349._007498.job.log.tgz.1
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc      8382 Jul 24 13:48 heartbeat.json
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc        22 Jul 24 13:49 wrapper_checkpoint.txt
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc      8192 Jul 24 13:49 boinc_mmap_file
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc        95 Jul 24 13:49 pilot_heartbeat.json
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc       823 Jul 24 13:49 pilotlog.txt
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc     82021 Jul 24 13:49 log.45743349._007498.job.log.1
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc       188 Jul 24 13:49 output.list
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc       620 Jul 24 13:49 runtime_log
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc    122880 Jul 24 13:49 result.tar.gz
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc      8648 Jul 24 13:49 runtime_log.err
[2025-07-24 13:49:17] -rw-------. 1 boinc boinc       645 Jul 24 13:49 G7oNDmSkGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1JNLDm6nM4Xo.diag
[2025-07-24 13:49:17] -rw-r--r--. 1 boinc boinc     22018 Jul 24 13:49 stderr.txt
[2025-07-24 13:49:18] No HITS result produced
[2025-07-24 13:49:18]  *** Contents of shared directory: ***
[2025-07-24 13:49:18] total 224648
[2025-07-24 13:49:18] -rw-r--r--. 2 boinc boinc 229355264 Jul 24 13:43 ATLAS.root_0
[2025-07-24 13:49:18] -rw-r--r--. 2 boinc boinc    542892 Jul 24 13:43 input.tar.gz
[2025-07-24 13:49:18] -rw-r--r--. 2 boinc boinc     15095 Jul 24 13:43 start_atlas.sh
[2025-07-24 13:49:18] -rw-------. 1 boinc boinc    122880 Jul 24 13:49 result.tar.gz
13:49:19 (2984454): run_atlas exited; CPU time 29.008967
13:49:19 (2984454): called boinc_finish(0)

</stderr_txt>
]]>

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