Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:41:13 (324906): wrapper (7.7.26015): starting
13:41:13 (324906): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 13:41:13] Arguments: --nthreads 12
[2025-07-24 13:41:13] Threads: 12
[2025-07-24 13:41:13] Checking for CVMFS
[2025-07-24 13:41:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 13:41:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 13:41:14] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 13:41:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 13:41:14] 2.11.5.0 7126 33314 246580 148714 1 416 43454882 45568001 17575 130560 0 239548754 99.741 170175603 25170 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-24 13:41:14] CVMFS is ok
[2025-07-24 13:41:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 13:41:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 13:41:14] Further information can be found at the LHC@home message board.
[2025-07-24 13:41:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 13:41:14] Checking for apptainer binary...
[2025-07-24 13:41:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 13:41:14] Running /usr/bin/apptainer --version
[2025-07-24 13:41:14] apptainer version 1.4.1-1.el9
[2025-07-24 13:41:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 13:41:15] wns0062.triumf.lcg
[2025-07-24 13:41:15] apptainer works
[2025-07-24 13:41:15] Set ATHENA_PROC_NUMBER=12
[2025-07-24 13:41:15] Set ATHENA_CORE_NUMBER=12
[2025-07-24 13:41:15] Starting ATLAS job with PandaID=6744925476
[2025-07-24 13:41:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 13:45:17]  *** The last 200 lines of the pilot log: ***
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | found no stored workdir sizes
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | wrong length of table data, x=[1753389733.0], y=[2050.0] (must be same and length>=4)
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | could have reported an average CPU frequency of 2557 MHz (4 samples)
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | ..............................
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | . Timing measurements:
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | . get job = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . initial setup = 3 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . payload setup = 11 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . stage-in = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . payload execution = 28 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . stage-out = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . log creation = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | ..............................
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744925476/pilotlog.txt
[2025-07-24 13:45:17] 2025-07-24 20:44:44,982 | INFO     | monitor loop #60: job 0:6744925476 is in state 'failed'
[2025-07-24 13:45:17] 2025-07-24 20:44:44,983 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-24 13:45:17] 2025-07-24 20:44:45,049 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 13:45:17] - Log from pilotlog.txt -
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | found no stored workdir sizes
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | wrong length of table data, x=[1753389733.0], y=[2050.0] (must be same and length>=4)
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | could have reported an average CPU frequency of 2557 MHz (4 samples)
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | ..............................
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | . Timing measurements:
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | . get job = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . initial setup = 3 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . payload setup = 11 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . stage-in = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . payload execution = 28 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . stage-out = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . log creation = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | ..............................
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744925476/pilotlog.txt
[2025-07-24 13:45:17] 2025-07-24 20:44:44,982 | INFO     | monitor loop #60: job 0:6744925476 is in state 'failed'
[2025-07-24 13:45:17] 2025-07-24 20:44:44,983 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-24 13:45:17] 2025-07-24 20:44:45,050 | WARNING  | 
[2025-07-24 13:45:17] [begin log extracts]
[2025-07-24 13:45:17] - Log from pilotlog.txt -
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | found no stored workdir sizes
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | WARNING  | wrong length of table data, x=[1753389733.0], y=[2050.0] (must be same and length>=4)
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | could have reported an average CPU frequency of 2557 MHz (4 samples)
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | ..............................
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | . Timing measurements:
[2025-07-24 13:45:17] 2025-07-24 20:44:44,946 | INFO     | . get job = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . initial setup = 3 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . payload setup = 11 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,947 | INFO     | . stage-in = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . payload execution = 28 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . stage-out = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | . log creation = 0 s
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | ..............................
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 13:45:17] 2025-07-24 20:44:44,970 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744925476/pilotlog.txt
[2025-07-24 13:45:17] 2025-07-24 20:44:44,982 | INFO     | monitor loop #60: job 0:6744925476 is in state 'failed'
[2025-07-24 13:45:17] 2025-07-24 20:44:44,983 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2025-07-24 13:45:17] [end log extracts]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,050 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 13:45:17] 2025-07-24 20:44:45,050 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | 
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | job summary report
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | --------------------------------------------------
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | PanDA job id: 6744925476
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | task id: 45743349
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 13:42:28,672 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | pilot state: failed 
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | transexitcode: 65
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | exeerrorcode: 65
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | exitcode: 65
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 13:45:17] 2025-07-24 20:44:45,582 | INFO     | cpuconsumptiontime: 15 s
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | nevents: 0
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | neventsw: 0
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | pid: 334805
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | pgrp: 334805
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | corecount: 12
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | event service: False
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | sizes: {0: 2397466, 8: 2397728, 11: 2397756, 44: 2421019, 45: 2425311, 46: 2425339, 172: 2425633}
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | --------------------------------------------------
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | 
[2025-07-24 13:45:17] 2025-07-24 20:44:45,583 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 13:45:17] 2025-07-24 20:44:45,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 13:45:17] 2025-07-24 20:44:45,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 13:45:17] 2025-07-24 20:44:45,601 | INFO     | job 6744925476 has completed (purged errors)
[2025-07-24 13:45:17] 2025-07-24 20:44:45,601 | INFO     | overall cleanup function is called
[2025-07-24 13:45:17] 2025-07-24 20:44:46,608 | INFO     | --- collectZombieJob: --- 10, [334805]
[2025-07-24 13:45:17] 2025-07-24 20:44:46,608 | INFO     | zombie collector waiting for pid 334805
[2025-07-24 13:45:17] 2025-07-24 20:44:46,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 13:45:17] 2025-07-24 20:44:46,608 | INFO     | collected zombie processes
[2025-07-24 13:45:17] 2025-07-24 20:44:46,608 | INFO     | will attempt to kill all subprocesses of pid=334805
[2025-07-24 13:45:17] 2025-07-24 20:44:46,874 | INFO     | process IDs to be killed: [334805] (in reverse order)
[2025-07-24 13:45:17] 2025-07-24 20:44:46,962 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 13:45:17] 2025-07-24 20:44:46,962 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 13:45:17] 2025-07-24 20:44:46,981 | INFO     | did not find any defunct processes belonging to 334805
[2025-07-24 13:45:17] 2025-07-24 20:44:46,988 | INFO     | did not find any defunct processes belonging to 334805
[2025-07-24 13:45:17] 2025-07-24 20:44:46,989 | INFO     | ready for new job
[2025-07-24 13:45:17] 2025-07-24 20:44:46,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 13:45:17] 2025-07-24 20:44:46,990 | INFO     | ***************************************
[2025-07-24 13:45:17] 2025-07-24 20:44:46,990 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 13:45:17] 2025-07-24 20:44:46,990 | INFO     | ***************************************
[2025-07-24 13:45:17] 2025-07-24 20:44:46,990 | INFO     | 
[2025-07-24 13:45:17] 2025-07-24 20:44:46,992 | INFO     | architecture information:
[2025-07-24 13:45:17] 2025-07-24 20:44:46,992 | INFO     | executing command: cat /etc/os-release
[2025-07-24 13:45:17] 2025-07-24 20:44:47,004 | INFO     | cat /etc/os-release:
[2025-07-24 13:45:17] NAME="CentOS Linux"
[2025-07-24 13:45:17] VERSION="7 (Core)"
[2025-07-24 13:45:17] ID="centos"
[2025-07-24 13:45:17] ID_LIKE="rhel fedora"
[2025-07-24 13:45:17] VERSION_ID="7"
[2025-07-24 13:45:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 13:45:17] ANSI_COLOR="0;31"
[2025-07-24 13:45:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 13:45:17] HOME_URL="https://www.centos.org/"
[2025-07-24 13:45:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 13:45:17] 
[2025-07-24 13:45:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 13:45:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 13:45:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 13:45:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 13:45:17] 
[2025-07-24 13:45:17] 2025-07-24 20:44:47,004 | INFO     | ***************************************
[2025-07-24 13:45:17] 2025-07-24 20:44:47,507 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 13:45:17] 2025-07-24 20:44:47,534 | INFO     | sufficient remaining disk space (1929776201728 B)
[2025-07-24 13:45:17] 2025-07-24 20:44:47,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 13:45:17] 2025-07-24 20:44:47,535 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 13:45:17] 2025-07-24 20:44:47,535 | INFO     | update_server=False
[2025-07-24 13:45:17] 2025-07-24 20:44:47,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 13:45:17] 2025-07-24 20:44:47,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 13:45:17] 2025-07-24 20:44:47,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 13:45:17] 2025-07-24 20:44:48,007 | INFO     | all data control threads have been joined
[2025-07-24 13:45:17] 2025-07-24 20:44:48,507 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 13:45:17] 2025-07-24 20:44:48,507 | INFO     | aborting loop
[2025-07-24 13:45:17] 2025-07-24 20:44:48,550 | INFO     | [job] retrieve thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:48,967 | INFO     | all payload control threads have been joined
[2025-07-24 13:45:17] 2025-07-24 20:44:49,013 | INFO     | [data] control thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,137 | INFO     | all job control threads have been joined
[2025-07-24 13:45:17] 2025-07-24 20:44:49,191 | INFO     | [payload] validate_post thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,523 | INFO     | [job] job monitor thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,542 | INFO     | [data] copytool_out thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,662 | INFO     | [job] validate thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,696 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,714 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,747 | INFO     | [payload] failed_post thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,973 | INFO     | [payload] control thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:49,994 | INFO     | [data] copytool_in thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:50,040 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:50,141 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 13:45:17] 2025-07-24 20:44:50,143 | INFO     | [job] control thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:51,147 | INFO     | [job] queue monitor thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:51,547 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 13:45:17] 2025-07-24 20:44:53,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139905799546688)>', '<ExcThread(monitor, started 139905271330560)>']
[2025-07-24 13:45:17] 2025-07-24 20:44:58,170 | INFO     | all workflow threads have been joined
[2025-07-24 13:45:17] 2025-07-24 20:44:58,171 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 13:45:17] 2025-07-24 20:44:58,171 | INFO     | traces error code: 0
[2025-07-24 13:45:17] 2025-07-24 20:44:58,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 13:45:17] 2025-07-24 20:45:17,268 | INFO     | PID=328483 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 13:45:17] 2025-07-24 20:45:17,268 | INFO     | .. there are 27 such processes running
[2025-07-24 13:45:17] 2025-07-24 20:45:17,268 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 13:45:17] 2025-07-24 20:45:17,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 13:45:17] 2025-07-24 20:45:17,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 13:45:17] 2025-07-24 20:45:17,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 13:45:17] 2025-07-24 20:45:17,269 | INFO     | [monitor] control thread has ended
[2025-07-24 13:45:17] 2025-07-24 20:45:17,394 [wrapper] ==== pilot stdout END ====
[2025-07-24 13:45:17] 2025-07-24 20:45:17,402 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 13:45:17] 2025-07-24 20:45:17,406 [wrapper] pilotpid: 328483
[2025-07-24 13:45:17] 2025-07-24 20:45:17,408 [wrapper] Pilot exit status: 0
[2025-07-24 13:45:17] 2025-07-24 20:45:17,420 [wrapper] pandaids: 6744925476
[2025-07-24 13:45:17] 2025-07-24 20:45:17,485 [wrapper] cleanup supervisor_pilot  328489 328484
[2025-07-24 13:45:17] 2025-07-24 20:45:17,488 [wrapper] Test setup, not cleaning
[2025-07-24 13:45:17] 2025-07-24 20:45:17,491 [wrapper] apfmon messages muted
[2025-07-24 13:45:17] 2025-07-24 20:45:17,493 [wrapper] ==== wrapper stdout END ====
[2025-07-24 13:45:17] 2025-07-24 20:45:17,496 [wrapper] ==== wrapper stderr END ====
[2025-07-24 13:45:17]  *** Error codes and diagnostics ***
[2025-07-24 13:45:17]     "exeErrorCode": 65,
[2025-07-24 13:45:17]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 13:45:17]     "pilotErrorCode": 1305,
[2025-07-24 13:45:17]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 13:45:17]  *** Listing of results directory ***
[2025-07-24 13:45:17] total 229180
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc    530466 Jul 24 12:13 pilot3.tar.gz
[2025-07-24 13:45:17] -rwx------. 1 boinc boinc     36292 Jul 24 12:18 runpilot2-wrapper.sh
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc      5112 Jul 24 12:18 queuedata.json
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc       100 Jul 24 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 13:45:17] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 13:41 run_atlas
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc       105 Jul 24 13:41 job.xml
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc      6596 Jul 24 13:41 init_data.xml
[2025-07-24 13:45:17] -rw-r--r--. 2 boinc boinc 230617326 Jul 24 13:41 EVNT.45743347._000387.pool.root.1
[2025-07-24 13:45:17] -rw-r--r--. 2 boinc boinc     15095 Jul 24 13:41 start_atlas.sh
[2025-07-24 13:45:17] drwxrwx--x. 2 boinc boinc      4096 Jul 24 13:41 shared
[2025-07-24 13:45:17] -rw-r--r--. 2 boinc boinc    542875 Jul 24 13:41 input.tar.gz
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc         0 Jul 24 13:41 boinc_lockfile
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc      2560 Jul 24 13:41 pandaJob.out
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc    979701 Jul 24 13:41 agis_schedconf.cvmfs.json
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc   1593052 Jul 24 13:41 agis_ddmendpoints.agis.ALL.json
[2025-07-24 13:45:17] drwx------. 4 boinc boinc      4096 Jul 24 13:41 pilot3
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc       958 Jul 24 13:42 memory_monitor_summary.json
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc     20373 Jul 24 13:42 log.45743349._007302.job.log.tgz.1
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc        95 Jul 24 13:44 pilot_heartbeat.json
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc      8400 Jul 24 13:44 heartbeat.json
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc        22 Jul 24 13:45 wrapper_checkpoint.txt
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc      8192 Jul 24 13:45 boinc_mmap_file
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc       524 Jul 24 13:45 boinc_task_state.xml
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc       822 Jul 24 13:45 pilotlog.txt
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc     76365 Jul 24 13:45 log.45743349._007302.job.log.1
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc       188 Jul 24 13:45 output.list
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc       620 Jul 24 13:45 runtime_log
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc    112640 Jul 24 13:45 result.tar.gz
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc      8485 Jul 24 13:45 runtime_log.err
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc       644 Jul 24 13:45 fG1MDmvdGz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOINLDm9JvORo.diag
[2025-07-24 13:45:17] -rw-r--r--. 1 boinc boinc     21772 Jul 24 13:45 stderr.txt
[2025-07-24 13:45:17] No HITS result produced
[2025-07-24 13:45:17]  *** Contents of shared directory: ***
[2025-07-24 13:45:17] total 225876
[2025-07-24 13:45:17] -rw-r--r--. 2 boinc boinc 230617326 Jul 24 13:41 ATLAS.root_0
[2025-07-24 13:45:17] -rw-r--r--. 2 boinc boinc     15095 Jul 24 13:41 start_atlas.sh
[2025-07-24 13:45:17] -rw-r--r--. 2 boinc boinc    542875 Jul 24 13:41 input.tar.gz
[2025-07-24 13:45:17] -rw-------. 1 boinc boinc    112640 Jul 24 13:45 result.tar.gz
13:45:18 (324906): run_atlas exited; CPU time 21.808606
13:45:18 (324906): called boinc_finish(0)

</stderr_txt>
]]>

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