Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:37:40 (3102822): wrapper (7.7.26015): starting
15:37:40 (3102822): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 15:37:40] Arguments: --nthreads 8
[2025-07-24 15:37:40] Threads: 8
[2025-07-24 15:37:40] Checking for CVMFS
[2025-07-24 15:37:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 15:37:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 15:37:40] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 15:37:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 15:37:40] 2.13.1.0 675479 10268 210396 148713 0 435 35245713 40960000 16454 16776704 0 23740785 99.844 21825254 54314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 15:37:40] CVMFS is ok
[2025-07-24 15:37:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 15:37:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 15:37:40] Further information can be found at the LHC@home message board.
[2025-07-24 15:37:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 15:37:40] Checking for apptainer binary...
[2025-07-24 15:37:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 15:37:40] Running /usr/bin/apptainer --version
[2025-07-24 15:37:40] apptainer version 1.4.1-1.el9
[2025-07-24 15:37:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 15:37:40] c-212-11.aglt2.org
[2025-07-24 15:37:40] apptainer works
[2025-07-24 15:37:40] Set ATHENA_PROC_NUMBER=8
[2025-07-24 15:37:40] Set ATHENA_CORE_NUMBER=8
[2025-07-24 15:37:41] Starting ATLAS job with PandaID=6744769970
[2025-07-24 15:37:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 17:44:06]  *** The last 200 lines of the pilot log: ***
[2025-07-24 17:44:06] 2025-07-24 21:43:30,393 | INFO     | monitor loop #500: job 0:6744769970 is in state 'finished'
[2025-07-24 17:44:06] 2025-07-24 21:43:30,393 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,103 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 17:44:06] 2025-07-24 21:43:31,109 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2996.943947916667
[2025-07-24 17:44:06] 2025-07-24 21:43:31,126 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744769970/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,127 | INFO     | extracted standard info from prmon json
[2025-07-24 17:44:06] 2025-07-24 21:43:31,127 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 17:44:06] 2025-07-24 21:43:31,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 17:44:06] 2025-07-24 21:43:31,133 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 17:44:06] 2025-07-24 21:43:31,133 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 17:44:06] 2025-07-24 21:43:31,136 | INFO     | fitting pss+swap vs Time
[2025-07-24 17:44:06] 2025-07-24 21:43:31,136 | INFO     | sum of square deviations: 576984483.9674811
[2025-07-24 17:44:06] 2025-07-24 21:43:31,136 | INFO     | sum of deviations: -11823201778.512194
[2025-07-24 17:44:06] 2025-07-24 21:43:31,137 | INFO     | mean x: 1753389625.0162601
[2025-07-24 17:44:06] 2025-07-24 21:43:31,137 | INFO     | mean y: 2582211.7560975607
[2025-07-24 17:44:06] 2025-07-24 21:43:31,137 | INFO     | -- intersect: 35931935442.13769
[2025-07-24 17:44:06] 2025-07-24 21:43:31,180 | INFO     | intersect: 35931935442.13769
[2025-07-24 17:44:06] 2025-07-24 21:43:31,181 | INFO     | chi2: 1.3721703585879612
[2025-07-24 17:44:06] 2025-07-24 21:43:31,181 | INFO     | sum of square deviations: 509439641.46610177
[2025-07-24 17:44:06] 2025-07-24 21:43:31,181 | INFO     | sum of deviations: -10885773233.29661
[2025-07-24 17:44:06] 2025-07-24 21:43:31,181 | INFO     | mean x: 1753389472.5169492
[2025-07-24 17:44:06] 2025-07-24 21:43:31,181 | INFO     | mean y: 2584329.3983050846
[2025-07-24 17:44:06] 2025-07-24 21:43:31,182 | INFO     | -- intersect: 37469241090.81392
[2025-07-24 17:44:06] 2025-07-24 21:43:31,182 | INFO     | intersect: 37469241090.81392
[2025-07-24 17:44:06] 2025-07-24 21:43:31,182 | INFO     | chi2: 1.3696357200471139
[2025-07-24 17:44:06] 2025-07-24 21:43:31,182 | INFO     | current chi2=1.3696357200471139 (change=0.184717482416369 %)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,182 | INFO     | right removable region: 117
[2025-07-24 17:44:06] 2025-07-24 21:43:31,182 | INFO     | sum of square deviations: 509438421.46610177
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | sum of deviations: -25975339368.62713
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | mean x: 1753389777.5169492
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | mean y: 2613369.813559322
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | -- intersect: 89404771898.4375
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | intersect: 89404771898.4375
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | chi2: 0.15716925247454377
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | current chi2=0.15716925247454377 (change=88.5459373545804 %)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,183 | INFO     | sum of square deviations: 447380833.96460223
[2025-07-24 17:44:06] 2025-07-24 21:43:31,184 | INFO     | sum of deviations: -21504503648.097343
[2025-07-24 17:44:06] 2025-07-24 21:43:31,184 | INFO     | mean x: 1753389930.017699
[2025-07-24 17:44:06] 2025-07-24 21:43:31,184 | INFO     | mean y: 2602363.548672566
[2025-07-24 17:44:06] 2025-07-24 21:43:31,184 | INFO     | -- intersect: 84283772418.29027
[2025-07-24 17:44:06] 2025-07-24 21:43:31,199 | INFO     | intersect: 84283772418.29027
[2025-07-24 17:44:06] 2025-07-24 21:43:31,200 | INFO     | chi2: 0.15267366461397042
[2025-07-24 17:44:06] 2025-07-24 21:43:31,200 | INFO     | current chi2=0.15267366461397042 (change=2.860348185025245 %)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,200 | INFO     | left removable region: 20
[2025-07-24 17:44:06] 2025-07-24 21:43:31,200 | INFO     | sum of square deviations: 282971681.9587634
[2025-07-24 17:44:06] 2025-07-24 21:43:31,200 | INFO     | sum of deviations: -10770980403.020615
[2025-07-24 17:44:06] 2025-07-24 21:43:31,201 | INFO     | mean x: 1753390052.0206184
[2025-07-24 17:44:06] 2025-07-24 21:43:31,201 | INFO     | mean y: 2576943.0103092785
[2025-07-24 17:44:06] 2025-07-24 21:43:31,201 | INFO     | -- intersect: 66743283145.25684
[2025-07-24 17:44:06] 2025-07-24 21:43:31,201 | INFO     | intersect: 66743283145.25684
[2025-07-24 17:44:06] 2025-07-24 21:43:31,201 | INFO     | chi2: 0.11211389226873021
[2025-07-24 17:44:06] 2025-07-24 21:43:31,201 | INFO     | -- intersect: 66743283145.25684
[2025-07-24 17:44:06] 2025-07-24 21:43:31,201 | INFO     | current memory leak: -38.06 B/s (using 97 data points, chi2=0.11)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | could have reported an average CPU frequency of 2978 MHz (8 samples)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | ..............................
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . Timing measurements:
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . get job = 0 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . initial setup = 2 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . payload setup = 9 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . stage-in = 0 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . payload execution = 7495 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . stage-out = 2 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | . log creation = 0 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,202 | INFO     | ..............................
[2025-07-24 17:44:06] 2025-07-24 21:43:31,408 | INFO     | 
[2025-07-24 17:44:06] 2025-07-24 21:43:31,408 | INFO     | job summary report
[2025-07-24 17:44:06] 2025-07-24 21:43:31,408 | INFO     | --------------------------------------------------
[2025-07-24 17:44:06] 2025-07-24 21:43:31,408 | INFO     | PanDA job id: 6744769970
[2025-07-24 17:44:06] 2025-07-24 21:43:31,408 | INFO     | task id: 45743349
[2025-07-24 17:44:06] 2025-07-24 21:43:31,408 | INFO     | errors: (none)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | pilot state: finished 
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | transexitcode: 0
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | exeerrorcode: 0
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | exeerrordiag: 
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | exitcode: 0
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | exitmsg: OK
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | cpuconsumptiontime: 38203 s
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | nevents: 400
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | neventsw: 0
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | pid: 3115520
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | pgrp: 3115520
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | corecount: 8
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | event service: False
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | sizes: {0: 2397468, 6: 2397730, 11: 2397758, 7509: 2425304, 7510: 2425303, 7512: 2434357, 7513: 2434541, 7523: 2434735}
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | --------------------------------------------------
[2025-07-24 17:44:06] 2025-07-24 21:43:31,409 | INFO     | 
[2025-07-24 17:44:06] 2025-07-24 21:43:31,410 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 17:44:06] 2025-07-24 21:43:31,520 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | job 6744769970 has completed (purged errors)
[2025-07-24 17:44:06] 2025-07-24 21:43:31,522 | INFO     | overall cleanup function is called
[2025-07-24 17:44:06] 2025-07-24 21:43:32,600 | INFO     | --- collectZombieJob: --- 10, [3115520]
[2025-07-24 17:44:06] 2025-07-24 21:43:32,600 | INFO     | zombie collector waiting for pid 3115520
[2025-07-24 17:44:06] 2025-07-24 21:43:32,600 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 17:44:06] 2025-07-24 21:43:32,600 | INFO     | collected zombie processes
[2025-07-24 17:44:06] 2025-07-24 21:43:32,600 | INFO     | will attempt to kill all subprocesses of pid=3115520
[2025-07-24 17:44:06] 2025-07-24 21:43:33,211 | INFO     | PID=3108318 has CPU usage=10.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-24 17:44:06] 2025-07-24 21:43:33,211 | INFO     | .. there are 14 such processes running
[2025-07-24 17:44:06] 2025-07-24 21:43:33,886 | INFO     | process IDs to be killed: [3115520] (in reverse order)
[2025-07-24 17:44:06] 2025-07-24 21:43:34,046 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 17:44:06] 2025-07-24 21:43:34,047 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 17:44:06] 2025-07-24 21:43:34,061 | INFO     | did not find any defunct processes belonging to 3115520
[2025-07-24 17:44:06] 2025-07-24 21:43:34,095 | INFO     | did not find any defunct processes belonging to 3115520
[2025-07-24 17:44:06] 2025-07-24 21:43:34,095 | INFO     | ready for new job
[2025-07-24 17:44:06] 2025-07-24 21:43:34,095 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 17:44:06] 2025-07-24 21:43:34,096 | INFO     | ***************************************
[2025-07-24 17:44:06] 2025-07-24 21:43:34,097 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 17:44:06] 2025-07-24 21:43:34,097 | INFO     | ***************************************
[2025-07-24 17:44:06] 2025-07-24 21:43:34,097 | INFO     | 
[2025-07-24 17:44:06] 2025-07-24 21:43:34,105 | INFO     | architecture information:
[2025-07-24 17:44:06] 2025-07-24 21:43:34,109 | INFO     | executing command: cat /etc/os-release
[2025-07-24 17:44:06] 2025-07-24 21:43:34,168 | INFO     | cat /etc/os-release:
[2025-07-24 17:44:06] NAME="CentOS Linux"
[2025-07-24 17:44:06] VERSION="7 (Core)"
[2025-07-24 17:44:06] ID="centos"
[2025-07-24 17:44:06] ID_LIKE="rhel fedora"
[2025-07-24 17:44:06] VERSION_ID="7"
[2025-07-24 17:44:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 17:44:06] ANSI_COLOR="0;31"
[2025-07-24 17:44:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 17:44:06] HOME_URL="https://www.centos.org/"
[2025-07-24 17:44:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 17:44:06] 
[2025-07-24 17:44:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 17:44:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 17:44:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 17:44:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 17:44:06] 
[2025-07-24 17:44:06] 2025-07-24 21:43:34,168 | INFO     | ***************************************
[2025-07-24 17:44:06] 2025-07-24 21:43:34,670 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 17:44:06] 2025-07-24 21:43:34,692 | INFO     | sufficient remaining disk space (128720044032 B)
[2025-07-24 17:44:06] 2025-07-24 21:43:34,693 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 17:44:06] 2025-07-24 21:43:34,693 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 17:44:06] 2025-07-24 21:43:34,693 | INFO     | update_server=False
[2025-07-24 17:44:06] 2025-07-24 21:43:34,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 17:44:06] 2025-07-24 21:43:34,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 17:44:06] 2025-07-24 21:43:34,694 | INFO     | aborting loop
[2025-07-24 17:44:06] 2025-07-24 21:43:34,814 | INFO     | all data control threads have been joined
[2025-07-24 17:44:06] 2025-07-24 21:43:35,120 | INFO     | all job control threads have been joined
[2025-07-24 17:44:06] 2025-07-24 21:43:35,702 | INFO     | [job] retrieve thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:35,703 | INFO     | [job] job monitor thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:35,822 | INFO     | [data] control thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:35,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 17:44:06] 2025-07-24 21:43:35,994 | INFO     | all payload control threads have been joined
[2025-07-24 17:44:06] 2025-07-24 21:43:36,058 | INFO     | [payload] failed_post thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,126 | INFO     | [job] control thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,224 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,434 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 17:44:06] 2025-07-24 21:43:36,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 17:44:06] 2025-07-24 21:43:36,680 | INFO     | [payload] validate_post thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,784 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,788 | INFO     | [job] validate thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,789 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:36,999 | INFO     | [payload] control thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:37,129 | INFO     | [data] copytool_in thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:37,462 | INFO     | [job] queue monitor thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:37,888 | INFO     | [data] copytool_out thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:40,589 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 17:44:06] 2025-07-24 21:43:42,113 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230589515584)>', '<ExcThread(monitor, started 140229734295296)>']
[2025-07-24 17:44:06] 2025-07-24 21:43:47,140 | INFO     | all workflow threads have been joined
[2025-07-24 17:44:06] 2025-07-24 21:43:47,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 17:44:06] 2025-07-24 21:43:47,142 | INFO     | traces error code: 0
[2025-07-24 17:44:06] 2025-07-24 21:43:47,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 17:44:06] 2025-07-24 21:44:05,779 | INFO     | PID=3108318 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 17:44:06] 2025-07-24 21:44:05,779 | INFO     | .. there are 14 such processes running
[2025-07-24 17:44:06] 2025-07-24 21:44:05,780 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 17:44:06] 2025-07-24 21:44:05,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 17:44:06] 2025-07-24 21:44:05,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 17:44:06] 2025-07-24 21:44:05,780 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 17:44:06] 2025-07-24 21:44:05,780 | INFO     | [monitor] control thread has ended
[2025-07-24 17:44:06] 2025-07-24 21:44:06,140 [wrapper] ==== pilot stdout END ====
[2025-07-24 17:44:06] 2025-07-24 21:44:06,164 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 17:44:06] 2025-07-24 21:44:06,170 [wrapper] pilotpid: 3108318
[2025-07-24 17:44:06] 2025-07-24 21:44:06,181 [wrapper] Pilot exit status: 0
[2025-07-24 17:44:06] 2025-07-24 21:44:06,240 [wrapper] pandaids: 6744769970
[2025-07-24 17:44:06] 2025-07-24 21:44:06,319 [wrapper] cleanup supervisor_pilot 3366959 3108319
[2025-07-24 17:44:06] 2025-07-24 21:44:06,327 [wrapper] Test setup, not cleaning
[2025-07-24 17:44:06] 2025-07-24 21:44:06,335 [wrapper] apfmon messages muted
[2025-07-24 17:44:06] 2025-07-24 21:44:06,350 [wrapper] ==== wrapper stdout END ====
[2025-07-24 17:44:06] 2025-07-24 21:44:06,353 [wrapper] ==== wrapper stderr END ====
[2025-07-24 17:44:06]  *** Error codes and diagnostics ***
[2025-07-24 17:44:06]     "exeErrorCode": 0,
[2025-07-24 17:44:06]     "exeErrorDiag": "",
[2025-07-24 17:44:06]     "pilotErrorCode": 0,
[2025-07-24 17:44:06]     "pilotErrorDiag": "",
[2025-07-24 17:44:06]  *** Listing of results directory ***
[2025-07-24 17:44:06] total 434348
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 11:17 pilot3.tar.gz
[2025-07-24 17:44:06] -rwx------. 1 boincer umatlas     36292 Jul 24 11:21 runpilot2-wrapper.sh
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 11:21 queuedata.json
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas       100 Jul 24 15:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 17:44:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 15:37 run_atlas
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas       105 Jul 24 15:37 job.xml
[2025-07-24 17:44:06] -rw-r--r--. 2 boincer umatlas 229188222 Jul 24 15:37 EVNT.45743347._000064.pool.root.1
[2025-07-24 17:44:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 15:37 start_atlas.sh
[2025-07-24 17:44:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 15:37 shared
[2025-07-24 17:44:06] -rw-r--r--. 2 boincer umatlas    542876 Jul 24 15:37 input.tar.gz
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas         0 Jul 24 15:37 boinc_lockfile
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas      2560 Jul 24 15:37 pandaJob.out
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas    979685 Jul 24 15:37 agis_schedconf.cvmfs.json
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas   1593052 Jul 24 15:37 agis_ddmendpoints.agis.ALL.json
[2025-07-24 17:44:06] drwx------. 4 boincer umatlas      4096 Jul 24 15:37 pilot3
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas      6943 Jul 24 17:37 init_data.xml
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas 209703878 Jul 24 17:42 HITS.45743349._001208.pool.root.1
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas       529 Jul 24 17:42 boinc_task_state.xml
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas      1035 Jul 24 17:43 memory_monitor_summary.json
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas    322295 Jul 24 17:43 log.45743349._001208.job.log.tgz.1
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas      7773 Jul 24 17:43 heartbeat.json
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas        27 Jul 24 17:44 wrapper_checkpoint.txt
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 17:44 boinc_mmap_file
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas        95 Jul 24 17:44 pilot_heartbeat.json
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas       823 Jul 24 17:44 pilotlog.txt
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas    678376 Jul 24 17:44 log.45743349._001208.job.log.1
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas       357 Jul 24 17:44 output.list
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas       620 Jul 24 17:44 runtime_log
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas   1024000 Jul 24 17:44 result.tar.gz
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas      8660 Jul 24 17:44 runtime_log.err
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas       652 Jul 24 17:44 HN9MDm4vCz7n9Rq4apOajLDm4fhM0noT9bVof3QYDm2qwKDmUW53hn.diag
[2025-07-24 17:44:06] -rw-r--r--. 1 boincer umatlas     21309 Jul 24 17:44 stderr.txt
[2025-07-24 17:44:06] HITS file was successfully produced:
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas 209703878 Jul 24 17:42 shared/HITS.pool.root.1
[2025-07-24 17:44:06]  *** Contents of shared directory: ***
[2025-07-24 17:44:06] total 430164
[2025-07-24 17:44:06] -rw-r--r--. 2 boincer umatlas 229188222 Jul 24 15:37 ATLAS.root_0
[2025-07-24 17:44:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 15:37 start_atlas.sh
[2025-07-24 17:44:06] -rw-r--r--. 2 boincer umatlas    542876 Jul 24 15:37 input.tar.gz
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas 209703878 Jul 24 17:42 HITS.pool.root.1
[2025-07-24 17:44:06] -rw-------. 1 boincer umatlas   1024000 Jul 24 17:44 result.tar.gz
17:44:08 (3102822): run_atlas exited; CPU time 38347.534930
17:44:08 (3102822): called boinc_finish(0)

</stderr_txt>
]]>

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