Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:30:44 (7878): wrapper (7.7.26015): starting
12:30:44 (7878): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 12:30:44] Arguments: --nthreads 8
[2025-07-25 12:30:44] Threads: 8
[2025-07-25 12:30:44] Checking for CVMFS
[2025-07-25 12:30:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 12:30:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 12:30:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 12:30:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 12:30:46] 2.11.2.0 32728 106519 110444 148738 1 109 23121367 25165824 4353 130560 0 80717504 99.889 45455761 3383 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-25 12:30:46] CVMFS is ok
[2025-07-25 12:30:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 12:30:46] Checking for apptainer binary...
[2025-07-25 12:30:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 12:30:46] Running /usr/bin/apptainer --version
[2025-07-25 12:30:46] apptainer version 1.3.2-1.el7
[2025-07-25 12:30:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 12:30:48] cg-vwn337.simple-grid.lan
[2025-07-25 12:30:48] apptainer works
[2025-07-25 12:30:48] Set ATHENA_PROC_NUMBER=8
[2025-07-25 12:30:48] Set ATHENA_CORE_NUMBER=8
[2025-07-25 12:30:48] Starting ATLAS job with PandaID=6744919045
[2025-07-25 12:30:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 16:58:30]  *** The last 200 lines of the pilot log: ***
[2025-07-25 16:58:30] 2025-07-25 14:57:57,501 | INFO     | sum of square deviations: 5576683165.5
[2025-07-25 16:58:30] 2025-07-25 14:57:57,503 | INFO     | sum of deviations: -60162725071.499985
[2025-07-25 16:58:30] 2025-07-25 14:57:57,503 | INFO     | mean x: 1753447483.5
[2025-07-25 16:58:30] 2025-07-25 14:57:57,503 | INFO     | mean y: 2537636.4160305345
[2025-07-25 16:58:30] 2025-07-25 14:57:57,503 | INFO     | -- intersect: 18919190375.40406
[2025-07-25 16:58:30] 2025-07-25 14:57:57,504 | INFO     | intersect: 18919190375.40406
[2025-07-25 16:58:30] 2025-07-25 14:57:57,504 | INFO     | chi2: 2.7893721920139964
[2025-07-25 16:58:30] 2025-07-25 14:57:57,505 | INFO     | sum of square deviations: 5263458688.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,507 | INFO     | sum of deviations: -41325184927.99999
[2025-07-25 16:58:30] 2025-07-25 14:57:57,507 | INFO     | mean x: 1753447331.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,507 | INFO     | mean y: 2546677.097276265
[2025-07-25 16:58:30] 2025-07-25 14:57:57,507 | INFO     | -- intersect: 13769451579.435709
[2025-07-25 16:58:30] 2025-07-25 14:57:57,507 | INFO     | intersect: 13769451579.435709
[2025-07-25 16:58:30] 2025-07-25 14:57:57,508 | INFO     | chi2: 2.0261559805270846
[2025-07-25 16:58:30] 2025-07-25 14:57:57,508 | INFO     | current chi2=2.0261559805270846 (change=27.361576689980932 %)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,509 | INFO     | sum of square deviations: 4962187923.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,511 | INFO     | sum of deviations: -40125082487.5
[2025-07-25 16:58:30] 2025-07-25 14:57:57,511 | INFO     | mean x: 1753447178.5
[2025-07-25 16:58:30] 2025-07-25 14:57:57,511 | INFO     | mean y: 2547284.638888889
[2025-07-25 16:58:30] 2025-07-25 14:57:57,511 | INFO     | -- intersect: 14181214793.113789
[2025-07-25 16:58:30] 2025-07-25 14:57:57,511 | INFO     | intersect: 14181214793.113789
[2025-07-25 16:58:30] 2025-07-25 14:57:57,511 | INFO     | chi2: 2.023717193480703
[2025-07-25 16:58:30] 2025-07-25 14:57:57,512 | INFO     | current chi2=2.023717193480703 (change=0.12036521718071956 %)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,512 | INFO     | right removable region: 251
[2025-07-25 16:58:30] 2025-07-25 14:57:57,512 | INFO     | sum of square deviations: 5263458688.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,514 | INFO     | sum of deviations: -108506882838.00006
[2025-07-25 16:58:30] 2025-07-25 14:57:57,515 | INFO     | mean x: 1753447636.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,515 | INFO     | mean y: 2561017.2568093385
[2025-07-25 16:58:30] 2025-07-25 14:57:57,515 | INFO     | -- intersect: 36150111227.11992
[2025-07-25 16:58:30] 2025-07-25 14:57:57,515 | INFO     | intersect: 36150111227.11992
[2025-07-25 16:58:30] 2025-07-25 14:57:57,515 | INFO     | chi2: 1.0667426964825788
[2025-07-25 16:58:30] 2025-07-25 14:57:57,516 | INFO     | current chi2=1.0667426964825788 (change=61.7568892549845 %)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,516 | INFO     | sum of square deviations: 4962187923.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,518 | INFO     | sum of deviations: -105978704196.49998
[2025-07-25 16:58:30] 2025-07-25 14:57:57,518 | INFO     | mean x: 1753447788.5
[2025-07-25 16:58:30] 2025-07-25 14:57:57,518 | INFO     | mean y: 2559716.0674603176
[2025-07-25 16:58:30] 2025-07-25 14:57:57,518 | INFO     | -- intersect: 37451388213.69962
[2025-07-25 16:58:30] 2025-07-25 14:57:57,518 | INFO     | intersect: 37451388213.69962
[2025-07-25 16:58:30] 2025-07-25 14:57:57,519 | INFO     | chi2: 1.0540920423100535
[2025-07-25 16:58:30] 2025-07-25 14:57:57,519 | INFO     | current chi2=1.0540920423100535 (change=1.185914299131263 %)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,519 | INFO     | left removable region: 20
[2025-07-25 16:58:30] 2025-07-25 14:57:57,519 | INFO     | sum of square deviations: 3822136780.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,521 | INFO     | sum of deviations: -71520106725.99998
[2025-07-25 16:58:30] 2025-07-25 14:57:57,521 | INFO     | mean x: 1753447758.0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,522 | INFO     | mean y: 2563197.3073593075
[2025-07-25 16:58:30] 2025-07-25 14:57:57,522 | INFO     | -- intersect: 32813207611.405327
[2025-07-25 16:58:30] 2025-07-25 14:57:57,522 | INFO     | intersect: 32813207611.405327
[2025-07-25 16:58:30] 2025-07-25 14:57:57,522 | INFO     | chi2: 0.2561427353522642
[2025-07-25 16:58:30] 2025-07-25 14:57:57,522 | INFO     | -- intersect: 32813207611.405327
[2025-07-25 16:58:30] 2025-07-25 14:57:57,522 | INFO     | current memory leak: -18.71 B/s (using 231 data points, chi2=0.26)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,523 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,523 | INFO     | ..............................
[2025-07-25 16:58:30] 2025-07-25 14:57:57,523 | INFO     | . Timing measurements:
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | . get job = 0 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | . initial setup = 2 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | . payload setup = 12 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | . stage-in = 0 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | . payload execution = 15948 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | . stage-out = 2 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | . log creation = 0 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,524 | INFO     | ..............................
[2025-07-25 16:58:30] 2025-07-25 14:57:57,870 | INFO     | 
[2025-07-25 16:58:30] 2025-07-25 14:57:57,870 | INFO     | job summary report
[2025-07-25 16:58:30] 2025-07-25 14:57:57,870 | INFO     | --------------------------------------------------
[2025-07-25 16:58:30] 2025-07-25 14:57:57,870 | INFO     | PanDA job id: 6744919045
[2025-07-25 16:58:30] 2025-07-25 14:57:57,870 | INFO     | task id: 45743349
[2025-07-25 16:58:30] 2025-07-25 14:57:57,870 | INFO     | errors: (none)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | pilot state: finished 
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | transexitcode: 0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | exeerrorcode: 0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | exeerrordiag: 
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | exitcode: 0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | exitmsg: OK
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | cpuconsumptiontime: 61482 s
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | nevents: 400
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | neventsw: 0
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | pid: 18433
[2025-07-25 16:58:30] 2025-07-25 14:57:57,871 | INFO     | pgrp: 18433
[2025-07-25 16:58:30] 2025-07-25 14:57:57,872 | INFO     | corecount: 8
[2025-07-25 16:58:30] 2025-07-25 14:57:57,872 | INFO     | event service: False
[2025-07-25 16:58:30] 2025-07-25 14:57:57,872 | INFO     | sizes: {0: 2397298, 1: 2397497, 2: 2397497, 8: 2397787, 12: 2397815, 15965: 2428797, 15969: 2437795, 15970: 2437851, 15987: 2438045}
[2025-07-25 16:58:30] 2025-07-25 14:57:57,872 | INFO     | --------------------------------------------------
[2025-07-25 16:58:30] 2025-07-25 14:57:57,872 | INFO     | 
[2025-07-25 16:58:30] 2025-07-25 14:57:57,872 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-25 16:58:30] 2025-07-25 14:57:57,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,906 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 16:58:30] 2025-07-25 14:57:57,906 | INFO     | job 6744919045 has completed (purged errors)
[2025-07-25 16:58:30] 2025-07-25 14:57:57,906 | INFO     | overall cleanup function is called
[2025-07-25 16:58:30] 2025-07-25 14:57:58,180 | INFO     | PID=11911 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 16:58:30] 2025-07-25 14:57:58,181 | INFO     | .. there are 9 such processes running
[2025-07-25 16:58:30] 2025-07-25 14:57:58,915 | INFO     | --- collectZombieJob: --- 10, [18433]
[2025-07-25 16:58:30] 2025-07-25 14:57:58,917 | INFO     | zombie collector waiting for pid 18433
[2025-07-25 16:58:30] 2025-07-25 14:57:58,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 16:58:30] 2025-07-25 14:57:58,917 | INFO     | collected zombie processes
[2025-07-25 16:58:30] 2025-07-25 14:57:58,917 | INFO     | will attempt to kill all subprocesses of pid=18433
[2025-07-25 16:58:30] 2025-07-25 14:57:59,007 | INFO     | process IDs to be killed: [18433] (in reverse order)
[2025-07-25 16:58:30] 2025-07-25 14:57:59,068 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 16:58:30] 2025-07-25 14:57:59,069 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 16:58:30] 2025-07-25 14:57:59,072 | INFO     | did not find any defunct processes belonging to 18433
[2025-07-25 16:58:30] 2025-07-25 14:57:59,075 | INFO     | did not find any defunct processes belonging to 18433
[2025-07-25 16:58:30] 2025-07-25 14:57:59,075 | INFO     | ready for new job
[2025-07-25 16:58:30] 2025-07-25 14:57:59,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 16:58:30] 2025-07-25 14:57:59,077 | INFO     | ***************************************
[2025-07-25 16:58:30] 2025-07-25 14:57:59,078 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 16:58:30] 2025-07-25 14:57:59,078 | INFO     | ***************************************
[2025-07-25 16:58:30] 2025-07-25 14:57:59,078 | INFO     | 
[2025-07-25 16:58:30] 2025-07-25 14:57:59,078 | INFO     | pilot is running in a VM
[2025-07-25 16:58:30] 2025-07-25 14:57:59,078 | INFO     | architecture information:
[2025-07-25 16:58:30] 2025-07-25 14:57:59,079 | INFO     | executing command: cat /etc/os-release
[2025-07-25 16:58:30] 2025-07-25 14:57:59,098 | INFO     | cat /etc/os-release:
[2025-07-25 16:58:30] NAME="CentOS Linux"
[2025-07-25 16:58:30] VERSION="7 (Core)"
[2025-07-25 16:58:30] ID="centos"
[2025-07-25 16:58:30] ID_LIKE="rhel fedora"
[2025-07-25 16:58:30] VERSION_ID="7"
[2025-07-25 16:58:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 16:58:30] ANSI_COLOR="0;31"
[2025-07-25 16:58:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 16:58:30] HOME_URL="https://www.centos.org/"
[2025-07-25 16:58:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 16:58:30] 
[2025-07-25 16:58:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 16:58:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 16:58:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 16:58:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 16:58:30] 
[2025-07-25 16:58:30] 2025-07-25 14:57:59,098 | INFO     | ***************************************
[2025-07-25 16:58:30] 2025-07-25 14:57:59,602 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-25 16:58:30] 2025-07-25 14:57:59,685 | INFO     | sufficient remaining disk space (496499687424 B)
[2025-07-25 16:58:30] 2025-07-25 14:57:59,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 16:58:30] 2025-07-25 14:57:59,686 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 16:58:30] 2025-07-25 14:57:59,686 | INFO     | update_server=False
[2025-07-25 16:58:30] 2025-07-25 14:57:59,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 16:58:30] 2025-07-25 14:57:59,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 16:58:30] 2025-07-25 14:57:59,686 | INFO     | aborting loop
[2025-07-25 16:58:30] 2025-07-25 14:58:00,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 16:58:30] 2025-07-25 14:58:00,049 | INFO     | all job control threads have been joined
[2025-07-25 16:58:30] 2025-07-25 14:58:00,515 | INFO     | all payload control threads have been joined
[2025-07-25 16:58:30] 2025-07-25 14:58:00,632 | INFO     | all data control threads have been joined
[2025-07-25 16:58:30] 2025-07-25 14:58:00,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 16:58:30] 2025-07-25 14:58:00,692 | INFO     | [job] retrieve thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:00,692 | INFO     | [job] job monitor thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:00,714 | INFO     | [job] validate thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:00,813 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:01,057 | INFO     | [job] control thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:01,113 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:01,230 | INFO     | [data] copytool_in thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:01,348 | INFO     | [payload] validate_post thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:01,521 | INFO     | [payload] control thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:01,640 | INFO     | [data] control thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:01,929 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:02,039 | INFO     | [payload] failed_post thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:02,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 16:58:30] 2025-07-25 14:58:02,680 | INFO     | [data] copytool_out thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:03,670 | INFO     | [job] queue monitor thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:04,043 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:09,857 | INFO     | job.realtimelogging is not enabled
[2025-07-25 16:58:30] 2025-07-25 14:58:10,862 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 16:58:30] 2025-07-25 14:58:12,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471452317504)>', '<ExcThread(monitor, started 140470797727488)>']
[2025-07-25 16:58:30] 2025-07-25 14:58:17,789 | INFO     | all workflow threads have been joined
[2025-07-25 16:58:30] 2025-07-25 14:58:17,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 16:58:30] 2025-07-25 14:58:17,790 | INFO     | traces error code: 0
[2025-07-25 16:58:30] 2025-07-25 14:58:17,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 16:58:30] 2025-07-25 14:58:30,375 | INFO     | PID=11911 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 16:58:30] 2025-07-25 14:58:30,376 | INFO     | .. there are 9 such processes running
[2025-07-25 16:58:30] 2025-07-25 14:58:30,376 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 16:58:30] 2025-07-25 14:58:30,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 16:58:30] 2025-07-25 14:58:30,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 16:58:30] 2025-07-25 14:58:30,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 16:58:30] 2025-07-25 14:58:30,377 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 16:58:30] 2025-07-25 14:58:30,377 | INFO     | [monitor] control thread has ended
[2025-07-25 16:58:30] 2025-07-25 14:58:30,627 [wrapper] ==== pilot stdout END ====
[2025-07-25 16:58:30] 2025-07-25 14:58:30,632 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 16:58:30] 2025-07-25 14:58:30,636 [wrapper] pilotpid: 11911
[2025-07-25 16:58:30] 2025-07-25 14:58:30,640 [wrapper] Pilot exit status: 0
[2025-07-25 16:58:30] 2025-07-25 14:58:30,666 [wrapper] pandaids: 6744919045
[2025-07-25 16:58:30] 2025-07-25 14:58:30,707 [wrapper] cleanup supervisor_pilot 11093 11912
[2025-07-25 16:58:30] 2025-07-25 14:58:30,711 [wrapper] Test setup, not cleaning
[2025-07-25 16:58:30] 2025-07-25 14:58:30,715 [wrapper] apfmon messages muted
[2025-07-25 16:58:30] 2025-07-25 14:58:30,720 [wrapper] ==== wrapper stdout END ====
[2025-07-25 16:58:30] 2025-07-25 14:58:30,723 [wrapper] ==== wrapper stderr END ====
[2025-07-25 16:58:30]  *** Error codes and diagnostics ***
[2025-07-25 16:58:30]     "exeErrorCode": 0,
[2025-07-25 16:58:30]     "exeErrorDiag": "",
[2025-07-25 16:58:30]     "pilotErrorCode": 0,
[2025-07-25 16:58:30]     "pilotErrorDiag": "",
[2025-07-25 16:58:30]  *** Listing of results directory ***
[2025-07-25 16:58:30] total 437468
[2025-07-25 16:58:30] -rwx------. 1 boinc boinc     36292 Jul 24 20:25 runpilot2-wrapper.sh
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc    530466 Jul 24 20:26 pilot3.tar.gz
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc      5112 Jul 24 20:27 queuedata.json
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc       100 Jul 25 12:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 16:58:30] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 12:30 run_atlas
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc       105 Jul 25 12:30 job.xml
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc      6390 Jul 25 12:30 init_data.xml
[2025-07-25 16:58:30] -rw-r--r--. 2 boinc boinc 230830777 Jul 25 12:30 EVNT.45743347._000304.pool.root.1
[2025-07-25 16:58:30] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:30 start_atlas.sh
[2025-07-25 16:58:30] drwxrwx--x. 2 boinc boinc        68 Jul 25 12:30 shared
[2025-07-25 16:58:30] -rw-r--r--. 2 boinc boinc    542877 Jul 25 12:30 input.tar.gz
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc         0 Jul 25 12:30 boinc_lockfile
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc      2560 Jul 25 12:30 pandaJob.out
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc    979717 Jul 25 12:31 agis_schedconf.cvmfs.json
[2025-07-25 16:58:30] drwx------. 4 boinc boinc      4096 Jul 25 12:31 pilot3
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc 209731023 Jul 25 16:56 HITS.45743349._005818.pool.root.1
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc       531 Jul 25 16:56 boinc_task_state.xml
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc      1032 Jul 25 16:57 memory_monitor_summary.json
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc   1593052 Jul 25 16:57 agis_ddmendpoints.agis.ALL.json
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc    400057 Jul 25 16:57 log.45743349._005818.job.log.tgz.1
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc        95 Jul 25 16:57 pilot_heartbeat.json
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc      7776 Jul 25 16:57 heartbeat.json
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc      8192 Jul 25 16:58 boinc_mmap_file
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc        28 Jul 25 16:58 wrapper_checkpoint.txt
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc       890 Jul 25 16:58 pilotlog.txt
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc   1369652 Jul 25 16:58 log.45743349._005818.job.log.1
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc       357 Jul 25 16:58 output.list
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc       620 Jul 25 16:58 runtime_log
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc   1792000 Jul 25 16:58 result.tar.gz
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc      8660 Jul 25 16:58 runtime_log.err
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc       657 Jul 25 16:58 gyqLDmJoFz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmo5MLDmttK34n.diag
[2025-07-25 16:58:30] -rw-r--r--. 1 boinc boinc     20711 Jul 25 16:58 stderr.txt
[2025-07-25 16:58:30] HITS file was successfully produced:
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc 209731023 Jul 25 16:56 shared/HITS.pool.root.1
[2025-07-25 16:58:30]  *** Contents of shared directory: ***
[2025-07-25 16:58:30] total 432540
[2025-07-25 16:58:30] -rw-r--r--. 2 boinc boinc 230830777 Jul 25 12:30 ATLAS.root_0
[2025-07-25 16:58:30] -rw-r--r--. 2 boinc boinc     15095 Jul 25 12:30 start_atlas.sh
[2025-07-25 16:58:30] -rw-r--r--. 2 boinc boinc    542877 Jul 25 12:30 input.tar.gz
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc 209731023 Jul 25 16:56 HITS.pool.root.1
[2025-07-25 16:58:30] -rw-------. 1 boinc boinc   1792000 Jul 25 16:58 result.tar.gz
16:58:31 (7878): run_atlas exited; CPU time 61682.359154
16:58:31 (7878): called boinc_finish(0)

</stderr_txt>
]]>

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