Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:12 (313085): wrapper (7.7.26015): starting
11:37:12 (313085): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 11:37:12] Arguments: --nthreads 8
[2025-07-24 11:37:12] Threads: 8
[2025-07-24 11:37:12] Checking for CVMFS
[2025-07-24 11:37:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 11:37:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 11:37:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 11:37:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 11:37:12] 2.11.3.0 22561 474955 234028 148711 0 402 42707664 45568000 10789 130560 0 2581421399 99.772 1926480923 21059 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-24 11:37:12] CVMFS is ok
[2025-07-24 11:37:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 11:37:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 11:37:12] Further information can be found at the LHC@home message board.
[2025-07-24 11:37:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 11:37:12] Checking for apptainer binary...
[2025-07-24 11:37:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 11:37:12] Running /usr/bin/apptainer --version
[2025-07-24 11:37:12] apptainer version 1.3.3-1.el9
[2025-07-24 11:37:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 11:37:12] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0014.triumf.lcg
[2025-07-24 11:37:12] apptainer works
[2025-07-24 11:37:12] Set ATHENA_PROC_NUMBER=8
[2025-07-24 11:37:12] Set ATHENA_CORE_NUMBER=8
[2025-07-24 11:37:12] Starting ATLAS job with PandaID=6744915484
[2025-07-24 11:37:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 11:40:32]  *** The last 200 lines of the pilot log: ***
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | found no stored workdir sizes
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | WARNING  | wrong length of table data, x=[1753382263.0], y=[2081.0] (must be same and length>=4)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | ..............................
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . Timing measurements:
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . get job = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . initial setup = 3 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . payload setup = 4 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . stage-in = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . payload execution = 15 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . stage-out = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . log creation = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | ..............................
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744915484/pilotlog.txt
[2025-07-24 11:40:32] 2025-07-24 18:39:59,076 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-24 11:40:32] - Log from pilotlog.txt -
[2025-07-24 11:40:32] 2025-07-24 18:39:59,062 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 11:40:32] 2025-07-24 18:39:59,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | found no stored workdir sizes
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | WARNING  | wrong length of table data, x=[1753382263.0], y=[2081.0] (must be same and length>=4)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | ..............................
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . Timing measurements:
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . get job = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . initial setup = 3 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . payload setup = 4 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . stage-in = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . payload execution = 15 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . stage-out = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . log creation = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | ..............................
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744915484/pilotlog.txt
[2025-07-24 11:40:32] 2025-07-24 18:39:59,076 | WARNING  | 
[2025-07-24 11:40:32] [begin log extracts]
[2025-07-24 11:40:32] - Log from pilotlog.txt -
[2025-07-24 11:40:32] 2025-07-24 18:39:59,062 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 11:40:32] 2025-07-24 18:39:59,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | WARNING  | found no stored workdir sizes
[2025-07-24 11:40:32] 2025-07-24 18:39:59,063 | INFO     | will not add max space = 0 B to job metrics
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | WARNING  | wrong length of table data, x=[1753382263.0], y=[2081.0] (must be same and length>=4)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | ..............................
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . Timing measurements:
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . get job = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . initial setup = 3 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,064 | INFO     | . payload setup = 4 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . stage-in = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . payload execution = 15 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . stage-out = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | . log creation = 0 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | ..............................
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-24 11:40:32] 2025-07-24 18:39:59,065 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6744915484/pilotlog.txt
[2025-07-24 11:40:32] [end log extracts]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,077 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,077 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-24 11:40:32] 2025-07-24 18:39:59,517 | INFO     | 
[2025-07-24 11:40:32] 2025-07-24 18:39:59,517 | INFO     | job summary report
[2025-07-24 11:40:32] 2025-07-24 18:39:59,517 | INFO     | --------------------------------------------------
[2025-07-24 11:40:32] 2025-07-24 18:39:59,517 | INFO     | PanDA job id: 6744915484
[2025-07-24 11:40:32] 2025-07-24 18:39:59,517 | INFO     | task id: 45743349
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-24 11:37:50,817 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | pilot state: failed 
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | transexitcode: 65
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | exeerrorcode: 65
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | exitcode: 65
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | cpuconsumptiontime: 16 s
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | nevents: 0
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | neventsw: 0
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | pid: 323491
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | pgrp: 323491
[2025-07-24 11:40:32] 2025-07-24 18:39:59,518 | INFO     | corecount: 8
[2025-07-24 11:40:32] 2025-07-24 18:39:59,519 | INFO     | event service: False
[2025-07-24 11:40:32] 2025-07-24 18:39:59,519 | INFO     | sizes: {0: 2397467, 3: 2397729, 11: 2397757, 22: 2421004, 23: 2425296, 24: 2425324, 143: 2425618}
[2025-07-24 11:40:32] 2025-07-24 18:39:59,519 | INFO     | --------------------------------------------------
[2025-07-24 11:40:32] 2025-07-24 18:39:59,519 | INFO     | 
[2025-07-24 11:40:32] 2025-07-24 18:39:59,519 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-24 11:40:32] 2025-07-24 18:39:59,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | job 6744915484 has completed (purged errors)
[2025-07-24 11:40:32] 2025-07-24 18:39:59,535 | INFO     | overall cleanup function is called
[2025-07-24 11:40:32] 2025-07-24 18:40:00,542 | INFO     | --- collectZombieJob: --- 10, [323491]
[2025-07-24 11:40:32] 2025-07-24 18:40:00,542 | INFO     | zombie collector waiting for pid 323491
[2025-07-24 11:40:32] 2025-07-24 18:40:00,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 11:40:32] 2025-07-24 18:40:00,542 | INFO     | collected zombie processes
[2025-07-24 11:40:32] 2025-07-24 18:40:00,542 | INFO     | will attempt to kill all subprocesses of pid=323491
[2025-07-24 11:40:32] 2025-07-24 18:40:00,722 | INFO     | process IDs to be killed: [323491] (in reverse order)
[2025-07-24 11:40:32] 2025-07-24 18:40:00,777 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 11:40:32] 2025-07-24 18:40:00,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 11:40:32] 2025-07-24 18:40:00,784 | INFO     | did not find any defunct processes belonging to 323491
[2025-07-24 11:40:32] 2025-07-24 18:40:00,790 | INFO     | did not find any defunct processes belonging to 323491
[2025-07-24 11:40:32] 2025-07-24 18:40:00,791 | INFO     | ready for new job
[2025-07-24 11:40:32] 2025-07-24 18:40:00,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 11:40:32] 2025-07-24 18:40:00,792 | INFO     | ***************************************
[2025-07-24 11:40:32] 2025-07-24 18:40:00,792 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 11:40:32] 2025-07-24 18:40:00,793 | INFO     | ***************************************
[2025-07-24 11:40:32] 2025-07-24 18:40:00,793 | INFO     | 
[2025-07-24 11:40:32] 2025-07-24 18:40:00,805 | INFO     | architecture information:
[2025-07-24 11:40:32] 2025-07-24 18:40:00,806 | INFO     | executing command: cat /etc/os-release
[2025-07-24 11:40:32] 2025-07-24 18:40:00,815 | INFO     | cat /etc/os-release:
[2025-07-24 11:40:32] NAME="CentOS Linux"
[2025-07-24 11:40:32] VERSION="7 (Core)"
[2025-07-24 11:40:32] ID="centos"
[2025-07-24 11:40:32] ID_LIKE="rhel fedora"
[2025-07-24 11:40:32] VERSION_ID="7"
[2025-07-24 11:40:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 11:40:32] ANSI_COLOR="0;31"
[2025-07-24 11:40:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 11:40:32] HOME_URL="https://www.centos.org/"
[2025-07-24 11:40:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 11:40:32] 
[2025-07-24 11:40:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 11:40:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 11:40:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 11:40:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 11:40:32] 
[2025-07-24 11:40:32] 2025-07-24 18:40:00,816 | INFO     | ***************************************
[2025-07-24 11:40:32] 2025-07-24 18:40:01,319 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-24 11:40:32] 2025-07-24 18:40:01,330 | INFO     | sufficient remaining disk space (1303571857408 B)
[2025-07-24 11:40:32] 2025-07-24 18:40:01,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 11:40:32] 2025-07-24 18:40:01,331 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 11:40:32] 2025-07-24 18:40:01,331 | INFO     | update_server=False
[2025-07-24 11:40:32] 2025-07-24 18:40:01,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 11:40:32] 2025-07-24 18:40:01,588 | INFO     | all job control threads have been joined
[2025-07-24 11:40:32] 2025-07-24 18:40:01,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 11:40:32] 2025-07-24 18:40:02,197 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 11:40:32] 2025-07-24 18:40:02,197 | INFO     | aborting loop
[2025-07-24 11:40:32] 2025-07-24 18:40:02,205 | INFO     | all payload control threads have been joined
[2025-07-24 11:40:32] 2025-07-24 18:40:02,306 | INFO     | all data control threads have been joined
[2025-07-24 11:40:32] 2025-07-24 18:40:02,336 | INFO     | [job] retrieve thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:02,371 | INFO     | [payload] validate_post thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:02,428 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:02,464 | INFO     | [data] copytool_in thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:02,540 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:02,593 | INFO     | [job] control thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:02,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 11:40:32] 2025-07-24 18:40:02,951 | INFO     | [payload] failed_post thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:02,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:03,203 | INFO     | [job] job monitor thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:03,208 | INFO     | [payload] control thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:03,311 | INFO     | [data] control thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:03,574 | INFO     | [job] validate thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:03,778 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:03,952 | INFO     | [data] copytool_out thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:04,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 11:40:32] 2025-07-24 18:40:05,166 | INFO     | [job] queue monitor thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:06,759 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 11:40:32] 2025-07-24 18:40:08,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420142004032)>', '<ExcThread(monitor, started 140419744634624)>']
[2025-07-24 11:40:32] 2025-07-24 18:40:13,145 | INFO     | all workflow threads have been joined
[2025-07-24 11:40:32] 2025-07-24 18:40:13,145 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 11:40:32] 2025-07-24 18:40:13,146 | INFO     | traces error code: 0
[2025-07-24 11:40:32] 2025-07-24 18:40:13,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 11:40:32] 2025-07-24 18:40:32,327 | INFO     | PID=316766 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 11:40:32] 2025-07-24 18:40:32,327 | INFO     | .. there are 19 such processes running
[2025-07-24 11:40:32] 2025-07-24 18:40:32,328 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 11:40:32] 2025-07-24 18:40:32,328 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 11:40:32] 2025-07-24 18:40:32,328 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 11:40:32] 2025-07-24 18:40:32,328 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 11:40:32] 2025-07-24 18:40:32,328 | INFO     | [monitor] control thread has ended
[2025-07-24 11:40:32] 2025-07-24 18:40:32,442 [wrapper] ==== pilot stdout END ====
[2025-07-24 11:40:32] 2025-07-24 18:40:32,445 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 11:40:32] 2025-07-24 18:40:32,446 [wrapper] pilotpid: 316766
[2025-07-24 11:40:32] 2025-07-24 18:40:32,448 [wrapper] Pilot exit status: 0
[2025-07-24 11:40:32] 2025-07-24 18:40:32,456 [wrapper] pandaids: 6744915484
[2025-07-24 11:40:32] 2025-07-24 18:40:32,490 [wrapper] cleanup supervisor_pilot  316772 316767
[2025-07-24 11:40:32] 2025-07-24 18:40:32,493 [wrapper] Test setup, not cleaning
[2025-07-24 11:40:32] 2025-07-24 18:40:32,495 [wrapper] apfmon messages muted
[2025-07-24 11:40:32] 2025-07-24 18:40:32,496 [wrapper] ==== wrapper stdout END ====
[2025-07-24 11:40:32] 2025-07-24 18:40:32,498 [wrapper] ==== wrapper stderr END ====
[2025-07-24 11:40:32]  *** Error codes and diagnostics ***
[2025-07-24 11:40:32]     "exeErrorCode": 65,
[2025-07-24 11:40:32]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 11:40:32]     "pilotErrorCode": 1305,
[2025-07-24 11:40:32]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-24 11:40:32]  *** Listing of results directory ***
[2025-07-24 11:40:32] total 229568
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc    530466 Jul 24 11:18 pilot3.tar.gz
[2025-07-24 11:40:32] -rwx------. 1 boinc boinc     36292 Jul 24 11:21 runpilot2-wrapper.sh
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc      5112 Jul 24 11:21 queuedata.json
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc       100 Jul 24 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 11:40:32] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 11:37 run_atlas
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc       105 Jul 24 11:37 job.xml
[2025-07-24 11:40:32] -rw-r--r--. 2 boinc boinc 231011999 Jul 24 11:37 EVNT.45743347._000265.pool.root.1
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc      6448 Jul 24 11:37 init_data.xml
[2025-07-24 11:40:32] -rw-r--r--. 2 boinc boinc     15095 Jul 24 11:37 start_atlas.sh
[2025-07-24 11:40:32] drwxrwx--x. 2 boinc boinc      4096 Jul 24 11:37 shared
[2025-07-24 11:40:32] -rw-r--r--. 2 boinc boinc    542896 Jul 24 11:37 input.tar.gz
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc         0 Jul 24 11:37 boinc_lockfile
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc      2561 Jul 24 11:37 pandaJob.out
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc    979693 Jul 24 11:37 agis_schedconf.cvmfs.json
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc   1593052 Jul 24 11:37 agis_ddmendpoints.agis.ALL.json
[2025-07-24 11:40:32] drwx------. 4 boinc boinc      4096 Jul 24 11:37 pilot3
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc       980 Jul 24 11:37 memory_monitor_summary.json
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc     20213 Jul 24 11:37 log.45743349._004850.job.log.tgz.1
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc       523 Jul 24 11:38 boinc_task_state.xml
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc      8386 Jul 24 11:39 heartbeat.json
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc      8192 Jul 24 11:40 boinc_mmap_file
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc        22 Jul 24 11:40 wrapper_checkpoint.txt
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc        95 Jul 24 11:40 pilot_heartbeat.json
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc       822 Jul 24 11:40 pilotlog.txt
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc     74390 Jul 24 11:40 log.45743349._004850.job.log.1
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc       188 Jul 24 11:40 output.list
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc       620 Jul 24 11:40 runtime_log
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc    112640 Jul 24 11:40 result.tar.gz
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc      8648 Jul 24 11:40 runtime_log.err
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc       644 Jul 24 11:40 bJ4NDmckFz7n9Rq4apOajLDm4fhM0noT9bVof3QYDmIFxKDmg3go0n.diag
[2025-07-24 11:40:32] -rw-r--r--. 1 boinc boinc     21792 Jul 24 11:40 stderr.txt
[2025-07-24 11:40:32] No HITS result produced
[2025-07-24 11:40:32]  *** Contents of shared directory: ***
[2025-07-24 11:40:32] total 226264
[2025-07-24 11:40:32] -rw-r--r--. 2 boinc boinc 231011999 Jul 24 11:37 ATLAS.root_0
[2025-07-24 11:40:32] -rw-r--r--. 2 boinc boinc     15095 Jul 24 11:37 start_atlas.sh
[2025-07-24 11:40:32] -rw-r--r--. 2 boinc boinc    542896 Jul 24 11:37 input.tar.gz
[2025-07-24 11:40:32] -rw-------. 1 boinc boinc    112640 Jul 24 11:40 result.tar.gz
11:40:34 (313085): run_atlas exited; CPU time 20.696101
11:40:34 (313085): called boinc_finish(0)

</stderr_txt>
]]>

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