Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:17:59 (2224310): wrapper (7.7.26015): starting
14:17:59 (2224310): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 14:17:59] Arguments: --nthreads 8
[2025-07-24 14:17:59] Threads: 8
[2025-07-24 14:17:59] Checking for CVMFS
[2025-07-24 14:17:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 14:17:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 14:17:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 14:17:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 14:17:59] 2.13.1.0 3153527 4401 97248 148711 3 188 21147417 40960001 8929 16776704 0 49187114 99.998 163750 57395 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 14:17:59] CVMFS is ok
[2025-07-24 14:17:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 14:17:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 14:17:59] Further information can be found at the LHC@home message board.
[2025-07-24 14:17:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 14:17:59] Checking for apptainer binary...
[2025-07-24 14:17:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 14:17:59] Running /usr/bin/apptainer --version
[2025-07-24 14:17:59] apptainer version 1.4.1-1.el9
[2025-07-24 14:17:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 14:17:59] c-208-37.aglt2.org
[2025-07-24 14:17:59] apptainer works
[2025-07-24 14:17:59] Set ATHENA_PROC_NUMBER=8
[2025-07-24 14:17:59] Set ATHENA_CORE_NUMBER=8
[2025-07-24 14:17:59] Starting ATLAS job with PandaID=6744843021
[2025-07-24 14:17:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 15:12:23]  *** The last 200 lines of the pilot log: ***
[2025-07-24 15:12:23]  scope=mc23_13p6TeV
[2025-07-24 15:12:23]  status=None
[2025-07-24 15:12:23]  status_code=0
[2025-07-24 15:12:23]  storage_token=
[2025-07-24 15:12:23]  surl=/tmp/boinchome/slots/12/PanDA_Pilot-6744843021/log.45743349._002780.job.log.tgz.1
[2025-07-24 15:12:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/8a/log.45743349._002780.job.log.tgz.1
[2025-07-24 15:12:23]  workdir=None
[2025-07-24 15:12:23] ]
[2025-07-24 15:12:23] 2025-07-24 19:11:26,359 | INFO     | transferring file log.45743349._002780.job.log.tgz.1 from /tmp/boinchome/slots/12/PanDA_Pilot-6744843021/log.45743349._002780.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-24 15:12:23] 2025-07-24 19:11:26,360 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/12/PanDA_Pilot-6744843021/log.45743349._002780.job.log.tgz.1 /tmp/boinchome/slots/12/log.45743349._002780.j
[2025-07-24 15:12:23] 2025-07-24 19:11:26,374 | INFO     | adding to output.list: log.45743349._002780.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cb/8a/log.45743349._002780.job.log.tg
[2025-07-24 15:12:23] 2025-07-24 19:11:26,375 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 15:12:23] 2025-07-24 19:11:26,375 | INFO     | summary of transferred files:
[2025-07-24 15:12:23] 2025-07-24 19:11:26,375 | INFO     |  -- lfn=log.45743349._002780.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 15:12:23] 2025-07-24 19:11:26,375 | INFO     | stage-out finished correctly
[2025-07-24 15:12:23] 2025-07-24 19:11:26,430 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 15:12:23] 2025-07-24 19:11:28,791 | INFO     | job 6744843021 has state=finished
[2025-07-24 15:12:23] 2025-07-24 19:11:28,791 | INFO     | preparing for final server update for job 6744843021 in state='finished'
[2025-07-24 15:12:23] 2025-07-24 19:11:28,791 | INFO     | this job has now completed (state=finished)
[2025-07-24 15:12:23] 2025-07-24 19:11:28,791 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 15:12:23] 2025-07-24 19:11:28,791 | INFO     | log transfer has been attempted: DONE
[2025-07-24 15:12:23] 2025-07-24 19:11:28,792 | INFO     | job 6744843021 has finished - writing final server update
[2025-07-24 15:12:23] 2025-07-24 19:11:28,792 | INFO     | total number of processed events: 400 (read)
[2025-07-24 15:12:23] 2025-07-24 19:11:28,792 | INFO     | executing command: lscpu
[2025-07-24 15:12:23] 2025-07-24 19:11:28,829 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 15:12:23] 2025-07-24 19:11:31,128 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-24 15:12:23] 2025-07-24 19:11:31,131 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3614.9810625000005
[2025-07-24 15:12:23] 2025-07-24 19:11:31,139 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6744843021/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | INFO     | extracted standard info from prmon json
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | INFO     | fitting pss+swap vs Time
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | INFO     | sum of square deviations: 30168007.5
[2025-07-24 15:12:23] 2025-07-24 19:11:31,140 | INFO     | sum of deviations: -442640400.0
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | mean x: 1753382783.5
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | mean y: 2545770.1304347827
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | -- intersect: 25729072675.878304
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | intersect: 25729072675.878304
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | chi2: 0.0010280493865818196
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | -- intersect: 25729072675.878304
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | current memory leak: -14.67 B/s (using 46 data points, chi2=0.00)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | could have reported an average CPU frequency of 3634 MHz (5 samples)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | ..............................
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . Timing measurements:
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . get job = 0 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . initial setup = 2 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . payload setup = 3 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . stage-in = 0 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . payload execution = 3179 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . stage-out = 0 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | . log creation = 0 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,141 | INFO     | ..............................
[2025-07-24 15:12:23] 2025-07-24 19:11:31,172 | INFO     | 
[2025-07-24 15:12:23] 2025-07-24 19:11:31,172 | INFO     | job summary report
[2025-07-24 15:12:23] 2025-07-24 19:11:31,172 | INFO     | --------------------------------------------------
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | PanDA job id: 6744843021
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | task id: 45743349
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | errors: (none)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | pilot state: finished 
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | transexitcode: 0
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | exeerrorcode: 0
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | exeerrordiag: 
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | exitcode: 0
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | exitmsg: OK
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | cpuconsumptiontime: 23769 s
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | nevents: 400
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | neventsw: 0
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | pid: 2252876
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | pgrp: 2252876
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | corecount: 8
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | event service: False
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | sizes: {0: 2397354, 3: 2397730, 11: 2397758, 3187: 2423283, 3188: 2432339, 3192: 2432509}
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | --------------------------------------------------
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | 
[2025-07-24 15:12:23] 2025-07-24 19:11:31,173 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-07-24 15:12:23] 2025-07-24 19:11:31,185 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | job 6744843021 has completed (purged errors)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,186 | INFO     | overall cleanup function is called
[2025-07-24 15:12:23] 2025-07-24 19:11:31,594 | WARNING  | process 2252876 can no longer be monitored (due to stat problems) - aborting
[2025-07-24 15:12:23] 2025-07-24 19:11:31,823 | INFO     | using path: /tmp/boinchome/slots/12/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,823 | INFO     | using path: /tmp/boinchome/slots/12/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,824 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/12/PanDA_Pilot-6744843021/payload.stdout) since it has not been created yet
[2025-07-24 15:12:23] 2025-07-24 19:11:31,824 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-07-24 15:12:23] 2025-07-24 19:11:31,837 | INFO     | sufficient remaining disk space (164214341632 B)
[2025-07-24 15:12:23] 2025-07-24 19:11:31,837 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-07-24 15:12:23] 2025-07-24 19:11:31,837 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/12/PanDA_Pilot-6744843021/HITS.45743349._002780.pool.root.1 since it does not exist
[2025-07-24 15:12:23] 2025-07-24 19:11:32,050 | INFO     | number of running child processes to parent process 2252876: 1
[2025-07-24 15:12:23] 2025-07-24 19:11:32,050 | INFO     | maximum number of monitored processes: 6
[2025-07-24 15:12:23] 2025-07-24 19:11:32,050 | INFO     | aborting job monitoring since job object (job id=6744843021) has expired
[2025-07-24 15:12:23] 2025-07-24 19:11:32,192 | INFO     | --- collectZombieJob: --- 10, [2252876]
[2025-07-24 15:12:23] 2025-07-24 19:11:32,192 | INFO     | zombie collector waiting for pid 2252876
[2025-07-24 15:12:23] 2025-07-24 19:11:32,192 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 15:12:23] 2025-07-24 19:11:32,192 | INFO     | collected zombie processes
[2025-07-24 15:12:23] 2025-07-24 19:11:32,192 | INFO     | will attempt to kill all subprocesses of pid=2252876
[2025-07-24 15:12:23] 2025-07-24 19:11:32,416 | INFO     | process IDs to be killed: [2252876] (in reverse order)
[2025-07-24 15:12:23] 2025-07-24 19:11:32,497 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 15:12:23] 2025-07-24 19:11:32,498 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 15:12:23] 2025-07-24 19:11:32,513 | INFO     | did not find any defunct processes belonging to 2252876
[2025-07-24 15:12:23] 2025-07-24 19:11:32,526 | INFO     | did not find any defunct processes belonging to 2252876
[2025-07-24 15:12:23] 2025-07-24 19:11:32,526 | INFO     | ready for new job
[2025-07-24 15:12:23] 2025-07-24 19:11:32,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 15:12:23] 2025-07-24 19:11:32,527 | INFO     | ***************************************
[2025-07-24 15:12:23] 2025-07-24 19:11:32,527 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 15:12:23] 2025-07-24 19:11:32,527 | INFO     | ***************************************
[2025-07-24 15:12:23] 2025-07-24 19:11:32,527 | INFO     | 
[2025-07-24 15:12:23] 2025-07-24 19:11:32,531 | INFO     | architecture information:
[2025-07-24 15:12:23] 2025-07-24 19:11:32,532 | INFO     | executing command: cat /etc/os-release
[2025-07-24 15:12:23] 2025-07-24 19:11:32,541 | INFO     | cat /etc/os-release:
[2025-07-24 15:12:23] NAME="CentOS Linux"
[2025-07-24 15:12:23] VERSION="7 (Core)"
[2025-07-24 15:12:23] ID="centos"
[2025-07-24 15:12:23] ID_LIKE="rhel fedora"
[2025-07-24 15:12:23] VERSION_ID="7"
[2025-07-24 15:12:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 15:12:23] ANSI_COLOR="0;31"
[2025-07-24 15:12:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 15:12:23] HOME_URL="https://www.centos.org/"
[2025-07-24 15:12:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 15:12:23] 
[2025-07-24 15:12:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 15:12:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 15:12:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 15:12:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 15:12:23] 
[2025-07-24 15:12:23] 2025-07-24 19:11:32,541 | INFO     | ***************************************
[2025-07-24 15:12:23] 2025-07-24 19:11:33,043 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-07-24 15:12:23] 2025-07-24 19:11:33,053 | INFO     | sufficient remaining disk space (164207001600 B)
[2025-07-24 15:12:23] 2025-07-24 19:11:33,053 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 15:12:23] 2025-07-24 19:11:33,053 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 15:12:23] 2025-07-24 19:11:33,053 | INFO     | update_server=False
[2025-07-24 15:12:23] 2025-07-24 19:11:33,053 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 15:12:23] 2025-07-24 19:11:33,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 15:12:23] 2025-07-24 19:11:33,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 15:12:23] 2025-07-24 19:11:33,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 15:12:23] 2025-07-24 19:11:33,054 | INFO     | aborting loop
[2025-07-24 15:12:23] 2025-07-24 19:11:33,435 | INFO     | all data control threads have been joined
[2025-07-24 15:12:23] 2025-07-24 19:11:33,918 | INFO     | all job control threads have been joined
[2025-07-24 15:12:23] 2025-07-24 19:11:33,930 | INFO     | all payload control threads have been joined
[2025-07-24 15:12:23] 2025-07-24 19:11:34,058 | INFO     | [job] retrieve thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,059 | INFO     | [job] queue monitor thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,059 | INFO     | [job] job monitor thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,283 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,440 | INFO     | [data] control thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 15:12:23] 2025-07-24 19:11:34,467 | INFO     | [payload] failed_post thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,600 | INFO     | [data] copytool_in thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,924 | INFO     | [job] control thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,935 | INFO     | [payload] control thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:34,995 | INFO     | [job] validate thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:35,003 | INFO     | [payload] validate_post thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:35,098 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:35,164 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:36,446 | INFO     | [data] copytool_out thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:37,059 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:43,846 | INFO     | job.realtimelogging is not enabled
[2025-07-24 15:12:23] 2025-07-24 19:11:44,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 15:12:23] 2025-07-24 19:11:45,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140703374026560)>', '<ExcThread(monitor, started 140703019542272)>']
[2025-07-24 15:12:23] 2025-07-24 19:11:50,154 | INFO     | all workflow threads have been joined
[2025-07-24 15:12:23] 2025-07-24 19:11:50,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 15:12:23] 2025-07-24 19:11:50,155 | INFO     | traces error code: 0
[2025-07-24 15:12:23] 2025-07-24 19:11:50,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 15:12:23] 2025-07-24 19:12:03,069 | INFO     | PID=2233725 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 15:12:23] 2025-07-24 19:12:03,069 | INFO     | .. there are 14 such processes running
[2025-07-24 15:12:23] 2025-07-24 19:12:03,069 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 15:12:23] 2025-07-24 19:12:03,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 15:12:23] 2025-07-24 19:12:03,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 15:12:23] 2025-07-24 19:12:03,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 15:12:23] 2025-07-24 19:12:03,070 | INFO     | [monitor] control thread has ended
[2025-07-24 15:12:23] 2025-07-24 19:12:03,142 [wrapper] ==== pilot stdout END ====
[2025-07-24 15:12:23] 2025-07-24 19:12:03,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 15:12:23] 2025-07-24 19:12:03,144 [wrapper] pilotpid: 2233725
[2025-07-24 15:12:23] 2025-07-24 19:12:03,145 [wrapper] Pilot exit status: 0
[2025-07-24 15:12:23] 2025-07-24 19:12:03,151 [wrapper] pandaids: 6744843021
[2025-07-24 15:12:23] 2025-07-24 19:12:03,206 [wrapper] cleanup supervisor_pilot 2410593 2233726
[2025-07-24 15:12:23] 2025-07-24 19:12:03,208 [wrapper] Test setup, not cleaning
[2025-07-24 15:12:23] 2025-07-24 19:12:03,209 [wrapper] apfmon messages muted
[2025-07-24 15:12:23] 2025-07-24 19:12:03,211 [wrapper] ==== wrapper stdout END ====
[2025-07-24 15:12:23] 2025-07-24 19:12:03,212 [wrapper] ==== wrapper stderr END ====
[2025-07-24 15:12:23]  *** Error codes and diagnostics ***
[2025-07-24 15:12:23]     "exeErrorCode": 0,
[2025-07-24 15:12:23]     "exeErrorDiag": "",
[2025-07-24 15:12:23]     "pilotErrorCode": 0,
[2025-07-24 15:12:23]     "pilotErrorDiag": "",
[2025-07-24 15:12:23]  *** Listing of results directory ***
[2025-07-24 15:12:23] total 435328
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 13:03 pilot3.tar.gz
[2025-07-24 15:12:23] -rwx------. 1 boincer umatlas     36292 Jul 24 13:17 runpilot2-wrapper.sh
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 13:17 queuedata.json
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas       100 Jul 24 14:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 15:12:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 14:17 run_atlas
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas       105 Jul 24 14:17 job.xml
[2025-07-24 15:12:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 14:17 start_atlas.sh
[2025-07-24 15:12:23] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 14:17 shared
[2025-07-24 15:12:23] -rw-r--r--. 2 boincer umatlas    542881 Jul 24 14:17 input.tar.gz
[2025-07-24 15:12:23] -rw-r--r--. 2 boincer umatlas 232217131 Jul 24 14:17 EVNT.45743347._000158.pool.root.1
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas         0 Jul 24 14:17 boinc_lockfile
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas      2559 Jul 24 14:17 pandaJob.out
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas    979693 Jul 24 14:18 agis_schedconf.cvmfs.json
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas   1593052 Jul 24 14:18 agis_ddmendpoints.agis.ALL.json
[2025-07-24 15:12:23] drwx------. 4 boincer umatlas      4096 Jul 24 14:18 pilot3
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas 208460385 Jul 24 15:11 HITS.45743349._002780.pool.root.1
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas       529 Jul 24 15:11 boinc_task_state.xml
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas        95 Jul 24 15:11 pilot_heartbeat.json
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas      1026 Jul 24 15:11 memory_monitor_summary.json
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas    278203 Jul 24 15:11 log.45743349._002780.job.log.tgz.1
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas      7761 Jul 24 15:11 heartbeat.json
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas      7173 Jul 24 15:11 init_data.xml
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas       823 Jul 24 15:12 pilotlog.txt
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas    333271 Jul 24 15:12 log.45743349._002780.job.log.1
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas       357 Jul 24 15:12 output.list
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas       620 Jul 24 15:12 runtime_log
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas    634880 Jul 24 15:12 result.tar.gz
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas      8674 Jul 24 15:12 runtime_log.err
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas       651 Jul 24 15:12 HHxNDmgkEz7n9Rq4apOajLDm4fhM0noT9bVof3QYDml0wKDm9fQaKn.diag
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas        27 Jul 24 15:12 wrapper_checkpoint.txt
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 15:12 boinc_mmap_file
[2025-07-24 15:12:23] -rw-r--r--. 1 boincer umatlas     22077 Jul 24 15:12 stderr.txt
[2025-07-24 15:12:23] HITS file was successfully produced:
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas 208460385 Jul 24 15:11 shared/HITS.pool.root.1
[2025-07-24 15:12:23]  *** Contents of shared directory: ***
[2025-07-24 15:12:23] total 431524
[2025-07-24 15:12:23] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 14:17 start_atlas.sh
[2025-07-24 15:12:23] -rw-r--r--. 2 boincer umatlas    542881 Jul 24 14:17 input.tar.gz
[2025-07-24 15:12:23] -rw-r--r--. 2 boincer umatlas 232217131 Jul 24 14:17 ATLAS.root_0
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas 208460385 Jul 24 15:11 HITS.pool.root.1
[2025-07-24 15:12:23] -rw-------. 1 boincer umatlas    634880 Jul 24 15:12 result.tar.gz
15:12:24 (2224310): run_atlas exited; CPU time 23830.034068
15:12:24 (2224310): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN