Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-25 06:34:08 (4328): Detected: vboxwrapper 26206
2025-07-25 06:34:08 (4328): Detected: BOINC client v8.0.2
2025-07-25 06:34:08 (4328): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-07-25 06:34:09 (4328): Successfully copied 'init_data.xml' to the shared directory.
2025-07-25 06:34:09 (4328): Create VM. (boinc_3a617aa907dec7b8, slot#9)
2025-07-25 06:34:10 (4328): Setting Memory Size for VM. (4800MB)
2025-07-25 06:34:10 (4328): Setting CPU Count for VM. (8)
2025-07-25 06:34:10 (4328): Setting Chipset Options for VM.
2025-07-25 06:34:10 (4328): Setting Graphics Controller Options for VM.
2025-07-25 06:34:11 (4328): Setting Boot Options for VM.
2025-07-25 06:34:11 (4328): Setting Network Configuration for NAT.
2025-07-25 06:34:11 (4328): Enabling VM Network Access.
2025-07-25 06:34:11 (4328): Disabling USB Support for VM.
2025-07-25 06:34:12 (4328): Disabling COM Port Support for VM.
2025-07-25 06:34:12 (4328): Disabling LPT Port Support for VM.
2025-07-25 06:34:12 (4328): Disabling Audio Support for VM.
2025-07-25 06:34:12 (4328): Disabling Clipboard Support for VM.
2025-07-25 06:34:13 (4328): Disabling Drag and Drop Support for VM.
2025-07-25 06:34:13 (4328): Adding storage controller(s) to VM.
2025-07-25 06:34:13 (4328): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-25 06:34:16 (4328): Adding VirtualBox Guest Additions to VM.
2025-07-25 06:34:16 (4328): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-25 06:34:17 (4328): forwarding host port 51284 to guest port 80
2025-07-25 06:34:17 (4328): Enabling remote desktop for VM.
2025-07-25 06:34:17 (4328): Required extension pack not installed, remote desktop not enabled.
2025-07-25 06:34:17 (4328): Enabling shared directory for VM.
2025-07-25 06:34:18 (4328): Starting VM using VBoxManage interface. (boinc_3a617aa907dec7b8, slot#9)
2025-07-25 06:34:23 (4328): Successfully started VM. (PID = '10692')
2025-07-25 06:34:23 (4328): Reporting VM Process ID to BOINC.
2025-07-25 06:34:23 (4328): Guest Log: BIOS: VirtualBox 7.0.12
2025-07-25 06:34:23 (4328): Guest Log: CPUID EDX: 0x178bfbff
2025-07-25 06:34:23 (4328): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-25 06:34:23 (4328): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-25 06:34:23 (4328): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-25 06:34:23 (4328): Detected: Web Application Enabled (http://localhost:51284)
2025-07-25 06:34:23 (4328): Preference change detected
2025-07-25 06:34:23 (4328): Setting CPU throttle for VM. (100%)
2025-07-25 06:34:24 (4328): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-25 06:34:25 (4328): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-25 06:34:25 (4328): Guest Log: BIOS: Booting from Hard Disk...
2025-07-25 06:34:30 (4328): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-25 06:34:30 (4328): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-25 06:34:30 (4328): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-25 06:34:37 (4328): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-25 06:34:37 (4328): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-25 06:34:43 (4328): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.000160 main     Log opened 2025-07-25T06:34:40.642134000Z
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.000267 main     OS Product: Linux
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.000299 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.000324 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.000348 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.000349 main     Process ID: 1366
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.000350 main     Package type: LINUX_64BITS_GENERIC
2025-07-25 06:34:43 (4328): Guest Log: 00:00:00.001136 main     5.2.32 r132073 started. Verbose level = 0
2025-07-25 06:34:43 (4328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-25 06:34:43 (4328): Guest Log: [INFO] Mounting shared directory
2025-07-25 06:34:43 (4328): Guest Log: [INFO] Checking for init_data.xml
2025-07-25 06:34:53 (4328): Guest Log: 00:00:10.014225 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 287 711 000ns (GuestNow=1 753 414 492 356 695 000 ns GuestLast=1 753 425 280 644 406 000 ns fSetTimeLastLoop=true )
2025-07-25 06:35:14 (4328): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-25 06:35:14 (4328): Guest Log: [INFO] Detected branch: prod
2025-07-25 06:35:14 (4328): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-25 06:35:14 (4328): Guest Log: Copying input files
2025-07-25 06:35:15 (4328): Guest Log: Copied input files into RunAtlas.
2025-07-25 06:35:15 (4328): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-07-25 06:35:15 (4328): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-07-25 06:35:15 (4328): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-07-25 06:35:15 (4328): Guest Log: Further information can be found at the LHC@home message board.
2025-07-25 06:35:26 (4328): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-25 06:35:26 (4328): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-25 06:35:26 (4328): Guest Log: 2.6.3.0 1669 0 32208 148725 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-07-25 06:35:27 (4328): Guest Log: copied the webapp to /var/www
2025-07-25 06:35:27 (4328): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-25 06:35:27 (4328): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-25 06:35:27 (4328): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-25 06:35:27 (4328): Guest Log:  *** Starting ATLAS job. (PandaID=6744844394 taskID=45743349) ***
2025-07-25 08:14:38 (4328): Status Report: Elapsed Time: '6000.000000'
2025-07-25 08:14:38 (4328): Status Report: CPU Time: '39633.281250'
2025-07-25 09:14:33 (4328): Guest Log:  *** Job finished ***
2025-07-25 09:14:33 (4328): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:20,680 | INFO     | [payload] validate_post thread has finished
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:21,081 | INFO     | [data] copytool_out thread has finished
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:24,190 | INFO     | [data] queue_monitor thread has finished
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:25,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444830361408)>', '<ExcThread(monitor, started 140444390373120)>']
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:25,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:25,760 | INFO     | [monitor] control thread has ended
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,727 | INFO     | all workflow threads have been joined
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,727 | INFO     | end of generic workflow (traces error code: 0)
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,727 | INFO     | traces error code: 0
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,728 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,830 [wrapper] ==== pilot stdout END ====
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,835 [wrapper] ==== wrapper stdout RESUME ====
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,842 [wrapper] pilotpid: 6031
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,846 [wrapper] Pilot exit status: 0
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,967 [wrapper] pandaids: 6744844394
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:30,995 [wrapper] cleanup supervisor_pilot  6298 6032
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:31,006 [wrapper] Test setup, not cleaning
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:31,012 [wrapper] apfmon messages muted
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:31,017 [wrapper] ==== wrapper stdout END ====
2025-07-25 09:14:33 (4328): Guest Log: 2025-07-25 06:14:31,021 [wrapper] ==== wrapper stderr END ====
2025-07-25 09:14:33 (4328): Guest Log:  *** Error codes and diagnostics ***
2025-07-25 09:14:33 (4328): Guest Log:     "exeErrorCode": 0,
2025-07-25 09:14:33 (4328): Guest Log:     "exeErrorDiag": "",
2025-07-25 09:14:33 (4328): Guest Log:     "pilotErrorCode": 0,
2025-07-25 09:14:33 (4328): Guest Log:     "pilotErrorDiag": "",
2025-07-25 09:14:33 (4328): Guest Log:  *** Listing of results directory ***
2025-07-25 09:14:33 (4328): Guest Log: total 208828
2025-07-25 09:14:33 (4328): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 24 17:03 pilot3.tar.gz
2025-07-25 09:14:33 (4328): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 24 17:22 runpilot2-wrapper.sh
2025-07-25 09:14:33 (4328): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 24 17:23 queuedata.json
2025-07-25 09:14:33 (4328): Guest Log: -rwxr-xr-x. 1 atlas atlas      6294 Jul 25 03:35 init_data.xml
2025-07-25 09:14:33 (4328): Guest Log: -rwxr-xr-x. 1 atlas atlas    542881 Jul 25 03:35 input.tar.gz
2025-07-25 09:14:33 (4328): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 25 03:35 start_atlas.sh
2025-07-25 09:14:33 (4328): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 25 03:35 EVNT.45743347._000218.pool.root.1 -> /data/./ATLAS.root_0
2025-07-25 09:14:33 (4328): Guest Log: -rw-r--r--. 1 atlas atlas      2558 Jul 25 03:35 pandaJob.out
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas    979709 Jul 25 03:37 agis_schedconf.cvmfs.json
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas   1593052 Jul 25 03:37 agis_ddmendpoints.agis.ALL.json
2025-07-25 09:14:33 (4328): Guest Log: drwx------. 4 atlas atlas      4096 Jul 25 03:37 pilot3
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas        95 Jul 25 06:13 pilot_heartbeat.json
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas 207818984 Jul 25 06:13 HITS.45743349._003816.pool.root.1
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas      1032 Jul 25 06:14 memory_monitor_summary.json
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas    328902 Jul 25 06:14 log.45743349._003816.job.log.tgz.1
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas      7824 Jul 25 06:14 heartbeat.json
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas      4540 Jul 25 06:14 pilotlog.txt
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas    777459 Jul 25 06:14 log.45743349._003816.job.log.1
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas       357 Jul 25 06:14 output.list
2025-07-25 09:14:33 (4328): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 25 06:14 runtime_log
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas   1126400 Jul 25 06:14 result.tar.gz
2025-07-25 09:14:33 (4328): Guest Log: -rw-r--r--. 1 atlas atlas      8866 Jul 25 06:14 runtime_log.err
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas       743 Jul 25 06:14 5ITKDm1oEz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnmMLDm5AzbTo.diag
2025-07-25 09:14:33 (4328): Guest Log: Looking for outputfile HITS.45743349._003816.pool.root.1
2025-07-25 09:14:33 (4328): Guest Log: HITS file was successfully produced
2025-07-25 09:14:33 (4328): Guest Log: -rw-------. 1 atlas atlas 207818984 Jul 25 06:13 /home/atlas/RunAtlas/HITS.45743349._003816.pool.root.1
2025-07-25 09:14:34 (4328): Guest Log: Successfully finished the ATLAS job!
2025-07-25 09:14:34 (4328): Guest Log: Copying the results back to the shared directory!
2025-07-25 09:14:34 (4328): Guest Log:  *** Contents of shared directory: ***
2025-07-25 09:14:34 (4328): Guest Log: total 346088
2025-07-25 09:14:34 (4328): Guest Log: -rwxrwxrwx. 1 root root 144871536 Jul 25 03:34 ATLAS.root_0
2025-07-25 09:14:34 (4328): Guest Log: -rwxrwxrwx. 1 root root 207818984 Jul 25 06:14 HITS.pool.root.1
2025-07-25 09:14:34 (4328): Guest Log: -rwxrwxrwx. 1 root root      6294 Jul 25 03:34 init_data.xml
2025-07-25 09:14:34 (4328): Guest Log: -rwxrwxrwx. 1 root root    542881 Jul 24 17:59 input.tar.gz
2025-07-25 09:14:34 (4328): Guest Log: -rwxrwxrwx. 1 root root   1126400 Jul 25 06:14 result.tar.gz
2025-07-25 09:14:34 (4328): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 24 17:59 start_atlas.sh
2025-07-25 09:14:34 (4328): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-25 09:14:34 (4328): VM Completion File Detected.
2025-07-25 09:14:34 (4328): Powering off VM.
2025-07-25 09:14:35 (4328): Successfully stopped VM.
2025-07-25 09:14:35 (4328): Deregistering VM. (boinc_3a617aa907dec7b8, slot#9)
2025-07-25 09:14:35 (4328): Removing network bandwidth throttle group from VM.
2025-07-25 09:14:35 (4328): Removing VM from VirtualBox.
09:14:41 (4328): called boinc_finish(0)

</stderr_txt>
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