Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:53:47 (454504): wrapper (7.7.26015): starting
19:53:47 (454504): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 19:53:47] Arguments: --nthreads 4
[2025-07-26 19:53:47] Threads: 4
[2025-07-26 19:53:47] Checking for CVMFS
[2025-07-26 19:53:47] No cvmfs_config command found, will try listing directly
[2025-07-26 19:53:47] CVMFS is ok
[2025-07-26 19:53:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 19:53:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 19:53:47] Further information can be found at the LHC@home message board.
[2025-07-26 19:53:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 19:53:47] Checking for apptainer binary...
[2025-07-26 19:53:47] which: no apptainer in ((null))
[2025-07-26 19:53:47] apptainer is not installed, using version from CVMFS
[2025-07-26 19:53:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 19:53:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-07-26 19:53:48] apptainer works
[2025-07-26 19:53:48] Set ATHENA_PROC_NUMBER=4
[2025-07-26 19:53:48] Set ATHENA_CORE_NUMBER=4
[2025-07-26 19:53:48] Starting ATLAS job with PandaID=6744844061
[2025-07-26 19:53:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 23:13:14]  *** The last 200 lines of the pilot log: ***
[2025-07-26 23:13:14] 2025-07-26 21:12:41,946 | INFO     | intersect: -3838662251.0111966
[2025-07-26 23:13:14] 2025-07-26 21:12:41,946 | INFO     | chi2: 0.002035407087326183
[2025-07-26 23:13:14] 2025-07-26 21:12:41,946 | INFO     | current chi2=0.002035407087326183 (change=62.95020857899879 %)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,946 | INFO     | sum of square deviations: 1808350185.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,948 | INFO     | sum of deviations: 4083168864.5
[2025-07-26 23:13:14] 2025-07-26 21:12:41,948 | INFO     | mean x: 1753558839.5
[2025-07-26 23:13:14] 2025-07-26 21:12:41,948 | INFO     | mean y: 2335388.85
[2025-07-26 23:13:14] 2025-07-26 21:12:41,948 | INFO     | -- intersect: -3957117218.7848163
[2025-07-26 23:13:14] 2025-07-26 21:12:41,948 | INFO     | intersect: -3957117218.7848163
[2025-07-26 23:13:14] 2025-07-26 21:12:41,948 | INFO     | chi2: 0.0005531978763379627
[2025-07-26 23:13:14] 2025-07-26 21:12:41,948 | INFO     | current chi2=0.0005531978763379627 (change=72.82126608566189 %)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,949 | INFO     | sum of square deviations: 1661798600.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,950 | INFO     | sum of deviations: 3437852396.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,950 | INFO     | mean x: 1753558992.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,950 | INFO     | mean y: 2336059.5085714287
[2025-07-26 23:13:14] 2025-07-26 21:12:41,950 | INFO     | -- intersect: -3625346008.688227
[2025-07-26 23:13:14] 2025-07-26 21:12:41,950 | INFO     | intersect: -3625346008.688227
[2025-07-26 23:13:14] 2025-07-26 21:12:41,950 | INFO     | chi2: 0.000413389629890175
[2025-07-26 23:13:14] 2025-07-26 21:12:41,950 | INFO     | current chi2=0.000413389629890175 (change=25.27273737442463 %)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,951 | INFO     | sum of square deviations: 1523386702.5
[2025-07-26 23:13:14] 2025-07-26 21:12:41,952 | INFO     | sum of deviations: 2842767109.5000005
[2025-07-26 23:13:14] 2025-07-26 21:12:41,952 | INFO     | mean x: 1753559144.5
[2025-07-26 23:13:14] 2025-07-26 21:12:41,952 | INFO     | mean y: 2336715.7
[2025-07-26 23:13:14] 2025-07-26 21:12:41,952 | INFO     | -- intersect: -3269951438.2971687
[2025-07-26 23:13:14] 2025-07-26 21:12:41,952 | INFO     | intersect: -3269951438.2971687
[2025-07-26 23:13:14] 2025-07-26 21:12:41,952 | INFO     | chi2: 0.00027339698602223567
[2025-07-26 23:13:14] 2025-07-26 21:12:41,953 | INFO     | current chi2=0.00027339698602223567 (change=33.86457563174265 %)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,953 | INFO     | sum of square deviations: 1392881930.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,954 | INFO     | sum of deviations: 2437081272.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,954 | INFO     | mean x: 1753559297.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,954 | INFO     | mean y: 2337186.9696969697
[2025-07-26 23:13:14] 2025-07-26 21:12:41,954 | INFO     | -- intersect: -3065809818.182553
[2025-07-26 23:13:14] 2025-07-26 21:12:41,954 | INFO     | intersect: -3065809818.182553
[2025-07-26 23:13:14] 2025-07-26 21:12:41,955 | INFO     | chi2: 0.00020268377079940927
[2025-07-26 23:13:14] 2025-07-26 21:12:41,955 | INFO     | current chi2=0.00020268377079940927 (change=25.86466524436199 %)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,955 | INFO     | sum of square deviations: 1270051720.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,956 | INFO     | sum of deviations: 2195861469.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,956 | INFO     | mean x: 1753559449.5
[2025-07-26 23:13:14] 2025-07-26 21:12:41,956 | INFO     | mean y: 2337486.8125
[2025-07-26 23:13:14] 2025-07-26 21:12:41,956 | INFO     | -- intersect: -3029486783.1140046
[2025-07-26 23:13:14] 2025-07-26 21:12:41,956 | INFO     | intersect: -3029486783.1140046
[2025-07-26 23:13:14] 2025-07-26 21:12:41,956 | INFO     | chi2: 0.00020074010640210133
[2025-07-26 23:13:14] 2025-07-26 21:12:41,957 | INFO     | current chi2=0.00020074010640210133 (change=0.9589640007396218 %)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,957 | INFO     | left removable region: 70
[2025-07-26 23:13:14] 2025-07-26 21:12:41,957 | INFO     | sum of square deviations: 522502820.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,957 | INFO     | sum of deviations: 929156758.0000001
[2025-07-26 23:13:14] 2025-07-26 21:12:41,958 | INFO     | mean x: 1753560334.0
[2025-07-26 23:13:14] 2025-07-26 21:12:41,958 | INFO     | mean y: 2339240.4537815126
[2025-07-26 23:13:14] 2025-07-26 21:12:41,958 | INFO     | -- intersect: -3115983517.8747525
[2025-07-26 23:13:14] 2025-07-26 21:12:41,958 | INFO     | intersect: -3115983517.8747525
[2025-07-26 23:13:14] 2025-07-26 21:12:41,958 | INFO     | chi2: 0.00017734761180101445
[2025-07-26 23:13:14] 2025-07-26 21:12:41,958 | INFO     | -- intersect: -3115983517.8747525
[2025-07-26 23:13:14] 2025-07-26 21:12:41,958 | INFO     | current memory leak: 1.78 B/s (using 119 data points, chi2=0.00)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,959 | INFO     | could have reported an average CPU frequency of 2590 MHz (10 samples)
[2025-07-26 23:13:14] 2025-07-26 21:12:41,959 | INFO     | ..............................
[2025-07-26 23:13:14] 2025-07-26 21:12:41,959 | INFO     | . Timing measurements:
[2025-07-26 23:13:14] 2025-07-26 21:12:41,959 | INFO     | . get job = 0 s
[2025-07-26 23:13:14] 2025-07-26 21:12:41,960 | INFO     | . initial setup = 1 s
[2025-07-26 23:13:14] 2025-07-26 21:12:41,960 | INFO     | . payload setup = 7 s
[2025-07-26 23:13:14] 2025-07-26 21:12:41,960 | INFO     | . stage-in = 0 s
[2025-07-26 23:13:14] 2025-07-26 21:12:41,960 | INFO     | . payload execution = 11890 s
[2025-07-26 23:13:14] 2025-07-26 21:12:41,960 | INFO     | . stage-out = 1 s
[2025-07-26 23:13:14] 2025-07-26 21:12:41,960 | INFO     | . log creation = 0 s
[2025-07-26 23:13:14] 2025-07-26 21:12:41,960 | INFO     | ..............................
[2025-07-26 23:13:14] 2025-07-26 21:12:42,424 | INFO     | 
[2025-07-26 23:13:14] 2025-07-26 21:12:42,424 | INFO     | job summary report
[2025-07-26 23:13:14] 2025-07-26 21:12:42,424 | INFO     | --------------------------------------------------
[2025-07-26 23:13:14] 2025-07-26 21:12:42,424 | INFO     | PanDA job id: 6744844061
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | task id: 45743349
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | errors: (none)
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | pilot state: finished 
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | transexitcode: 0
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | exeerrorcode: 0
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | exeerrordiag: 
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | exitcode: 0
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | exitmsg: OK
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | cpuconsumptiontime: 46012 s
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | nevents: 400
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | neventsw: 0
[2025-07-26 23:13:14] 2025-07-26 21:12:42,425 | INFO     | pid: 465598
[2025-07-26 23:13:14] 2025-07-26 21:12:42,426 | INFO     | pgrp: 465598
[2025-07-26 23:13:14] 2025-07-26 21:12:42,426 | INFO     | corecount: 4
[2025-07-26 23:13:14] 2025-07-26 21:12:42,426 | INFO     | event service: False
[2025-07-26 23:13:14] 2025-07-26 21:12:42,426 | INFO     | sizes: {0: 2397480, 1: 2397480, 5: 2397770, 11: 2397826, 11901: 2427265, 11903: 2436285, 11905: 2436469, 11909: 2436663}
[2025-07-26 23:13:14] 2025-07-26 21:12:42,426 | INFO     | --------------------------------------------------
[2025-07-26 23:13:14] 2025-07-26 21:12:42,426 | INFO     | 
[2025-07-26 23:13:14] 2025-07-26 21:12:42,426 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-07-26 23:13:14] 2025-07-26 21:12:42,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,451 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | job 6744844061 has completed (purged errors)
[2025-07-26 23:13:14] 2025-07-26 21:12:42,452 | INFO     | overall cleanup function is called
[2025-07-26 23:13:14] 2025-07-26 21:12:43,461 | INFO     | --- collectZombieJob: --- 10, [465598]
[2025-07-26 23:13:14] 2025-07-26 21:12:43,461 | INFO     | zombie collector waiting for pid 465598
[2025-07-26 23:13:14] 2025-07-26 21:12:43,461 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 23:13:14] 2025-07-26 21:12:43,461 | INFO     | collected zombie processes
[2025-07-26 23:13:14] 2025-07-26 21:12:43,461 | INFO     | will attempt to kill all subprocesses of pid=465598
[2025-07-26 23:13:14] 2025-07-26 21:12:43,804 | INFO     | process IDs to be killed: [465598] (in reverse order)
[2025-07-26 23:13:14] 2025-07-26 21:12:43,918 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 23:13:14] 2025-07-26 21:12:43,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 23:13:14] 2025-07-26 21:12:43,928 | INFO     | did not find any defunct processes belonging to 465598
[2025-07-26 23:13:14] 2025-07-26 21:12:43,938 | INFO     | did not find any defunct processes belonging to 465598
[2025-07-26 23:13:14] 2025-07-26 21:12:43,938 | INFO     | ready for new job
[2025-07-26 23:13:14] 2025-07-26 21:12:43,938 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 23:13:14] 2025-07-26 21:12:43,940 | INFO     | ***************************************
[2025-07-26 23:13:14] 2025-07-26 21:12:43,941 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 23:13:14] 2025-07-26 21:12:43,941 | INFO     | ***************************************
[2025-07-26 23:13:14] 2025-07-26 21:12:43,941 | INFO     | 
[2025-07-26 23:13:14] 2025-07-26 21:12:43,944 | INFO     | architecture information:
[2025-07-26 23:13:14] 2025-07-26 21:12:43,945 | INFO     | executing command: cat /etc/os-release
[2025-07-26 23:13:14] 2025-07-26 21:12:43,962 | INFO     | cat /etc/os-release:
[2025-07-26 23:13:14] NAME="CentOS Linux"
[2025-07-26 23:13:14] VERSION="7 (Core)"
[2025-07-26 23:13:14] ID="centos"
[2025-07-26 23:13:14] ID_LIKE="rhel fedora"
[2025-07-26 23:13:14] VERSION_ID="7"
[2025-07-26 23:13:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 23:13:14] ANSI_COLOR="0;31"
[2025-07-26 23:13:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 23:13:14] HOME_URL="https://www.centos.org/"
[2025-07-26 23:13:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 23:13:14] 
[2025-07-26 23:13:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 23:13:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 23:13:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 23:13:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 23:13:14] 
[2025-07-26 23:13:14] 2025-07-26 21:12:43,963 | INFO     | ***************************************
[2025-07-26 23:13:14] 2025-07-26 21:12:44,466 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-07-26 23:13:14] 2025-07-26 21:12:44,483 | INFO     | sufficient remaining disk space (667015970816 B)
[2025-07-26 23:13:14] 2025-07-26 21:12:44,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 23:13:14] 2025-07-26 21:12:44,484 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 23:13:14] 2025-07-26 21:12:44,484 | INFO     | update_server=False
[2025-07-26 23:13:14] 2025-07-26 21:12:44,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 23:13:14] 2025-07-26 21:12:44,484 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 23:13:14] 2025-07-26 21:12:44,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 23:13:14] 2025-07-26 21:12:44,820 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 23:13:14] 2025-07-26 21:12:44,821 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 23:13:14] 2025-07-26 21:12:44,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:13:14] 2025-07-26 21:12:44,821 | INFO     | will abort loop
[2025-07-26 23:13:14] 2025-07-26 21:12:45,395 | INFO     | all payload control threads have been joined
[2025-07-26 23:13:14] 2025-07-26 21:12:45,490 | INFO     | [job] retrieve thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:45,516 | INFO     | all data control threads have been joined
[2025-07-26 23:13:14] 2025-07-26 21:12:45,779 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:45,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:45,825 | INFO     | [job] job monitor thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:45,847 | INFO     | all job control threads have been joined
[2025-07-26 23:13:14] 2025-07-26 21:12:46,359 | INFO     | [job] validate thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,400 | INFO     | [payload] control thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,490 | INFO     | [data] copytool_out thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,522 | INFO     | [data] control thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,571 | INFO     | [payload] validate_post thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,684 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,852 | INFO     | [job] control thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,870 | INFO     | [payload] failed_post thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,936 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:46,970 | INFO     | [data] copytool_in thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:47,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 23:13:14] 2025-07-26 21:12:48,076 | INFO     | [job] queue monitor thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:48,490 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 23:13:14] 2025-07-26 21:12:49,589 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22707872180032)>', '<ExcThread(monitor, started 22707632568064)>']
[2025-07-26 23:13:14] 2025-07-26 21:12:54,614 | INFO     | all workflow threads have been joined
[2025-07-26 23:13:14] 2025-07-26 21:12:54,615 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 23:13:14] 2025-07-26 21:12:54,615 | INFO     | traces error code: 0
[2025-07-26 23:13:14] 2025-07-26 21:12:54,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 23:13:14] 2025-07-26 21:13:14,220 | INFO     | PID=458174 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-26 23:13:14] 2025-07-26 21:13:14,220 | INFO     | .. there are 12 such processes running
[2025-07-26 23:13:14] 2025-07-26 21:13:14,221 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 23:13:14] 2025-07-26 21:13:14,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 23:13:14] 2025-07-26 21:13:14,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 23:13:14] 2025-07-26 21:13:14,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 23:13:14] 2025-07-26 21:13:14,221 | INFO     | [monitor] control thread has ended
[2025-07-26 23:13:14] 2025-07-26 21:13:14,400 [wrapper] ==== pilot stdout END ====
[2025-07-26 23:13:14] 2025-07-26 21:13:14,403 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 23:13:14] 2025-07-26 21:13:14,407 [wrapper] pilotpid: 458174
[2025-07-26 23:13:14] 2025-07-26 21:13:14,410 [wrapper] Pilot exit status: 0
[2025-07-26 23:13:14] 2025-07-26 21:13:14,421 [wrapper] pandaids: 6744844061
[2025-07-26 23:13:14] 2025-07-26 21:13:14,496 [wrapper] cleanup supervisor_pilot  923400 458175
[2025-07-26 23:13:14] 2025-07-26 21:13:14,499 [wrapper] Test setup, not cleaning
[2025-07-26 23:13:14] 2025-07-26 21:13:14,502 [wrapper] apfmon messages muted
[2025-07-26 23:13:14] 2025-07-26 21:13:14,505 [wrapper] ==== wrapper stdout END ====
[2025-07-26 23:13:14] 2025-07-26 21:13:14,508 [wrapper] ==== wrapper stderr END ====
[2025-07-26 23:13:14]  *** Error codes and diagnostics ***
[2025-07-26 23:13:14]     "exeErrorCode": 0,
[2025-07-26 23:13:14]     "exeErrorDiag": "",
[2025-07-26 23:13:14]     "pilotErrorCode": 0,
[2025-07-26 23:13:14]     "pilotErrorDiag": "",
[2025-07-26 23:13:14]  *** Listing of results directory ***
[2025-07-26 23:13:14] total 352964
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc    530466 Jul 24 19:03 pilot3.tar.gz
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc      5112 Jul 24 19:21 queuedata.json
[2025-07-26 23:13:14] -rwx------ 1 boinc boinc     36292 Jul 24 19:21 runpilot2-wrapper.sh
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc       100 Jul 26 19:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 23:13:14] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 19:41 run_atlas
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc       105 Jul 26 19:41 job.xml
[2025-07-26 23:13:14] -rw-r--r-- 2 boinc boinc 144414020 Jul 26 19:53 EVNT.45743347._000199.pool.root.1
[2025-07-26 23:13:14] -rw-r--r-- 2 boinc boinc     15095 Jul 26 19:53 start_atlas.sh
[2025-07-26 23:13:14] drwxrwx--x 2 boinc boinc      4096 Jul 26 19:53 shared
[2025-07-26 23:13:14] -rw-r--r-- 2 boinc boinc    542880 Jul 26 19:53 input.tar.gz
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc         0 Jul 26 19:53 boinc_lockfile
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc      2560 Jul 26 19:53 pandaJob.out
[2025-07-26 23:13:14] -rw------- 1 boinc boinc    980125 Jul 26 19:53 agis_schedconf.cvmfs.json
[2025-07-26 23:13:14] drwx------ 4 boinc boinc      4096 Jul 26 19:53 pilot3
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc      6640 Jul 26 20:41 init_data.xml
[2025-07-26 23:13:14] -rw------- 1 boinc boinc 210268498 Jul 26 23:12 HITS.45743349._003531.pool.root.1
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc       530 Jul 26 23:12 boinc_task_state.xml
[2025-07-26 23:13:14] -rw------- 1 boinc boinc      1035 Jul 26 23:12 memory_monitor_summary.json
[2025-07-26 23:13:14] -rw------- 1 boinc boinc   1593052 Jul 26 23:12 agis_ddmendpoints.agis.ALL.json
[2025-07-26 23:13:14] -rw------- 1 boinc boinc    310576 Jul 26 23:12 log.45743349._003531.job.log.tgz.1
[2025-07-26 23:13:14] -rw------- 1 boinc boinc      7825 Jul 26 23:12 heartbeat.json
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc      8192 Jul 26 23:13 boinc_mmap_file
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc        28 Jul 26 23:13 wrapper_checkpoint.txt
[2025-07-26 23:13:14] -rw------- 1 boinc boinc        95 Jul 26 23:13 pilot_heartbeat.json
[2025-07-26 23:13:14] -rw------- 1 boinc boinc       822 Jul 26 23:13 pilotlog.txt
[2025-07-26 23:13:14] -rw------- 1 boinc boinc   1129153 Jul 26 23:13 log.45743349._003531.job.log.1
[2025-07-26 23:13:14] -rw------- 1 boinc boinc       357 Jul 26 23:13 output.list
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc       620 Jul 26 23:13 runtime_log
[2025-07-26 23:13:14] -rw------- 1 boinc boinc   1454080 Jul 26 23:13 result.tar.gz
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc      9027 Jul 26 23:13 runtime_log.err
[2025-07-26 23:13:14] -rw------- 1 boinc boinc       664 Jul 26 23:13 99fMDmmoEz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm4lMLDmcQwQAo.diag
[2025-07-26 23:13:14] -rw-r--r-- 1 boinc boinc     20761 Jul 26 23:13 stderr.txt
[2025-07-26 23:13:14] HITS file was successfully produced:
[2025-07-26 23:13:14] -rw------- 1 boinc boinc 210268498 Jul 26 23:12 shared/HITS.pool.root.1
[2025-07-26 23:13:14]  *** Contents of shared directory: ***
[2025-07-26 23:13:14] total 348352
[2025-07-26 23:13:14] -rw-r--r-- 2 boinc boinc 144414020 Jul 26 19:53 ATLAS.root_0
[2025-07-26 23:13:14] -rw-r--r-- 2 boinc boinc     15095 Jul 26 19:53 start_atlas.sh
[2025-07-26 23:13:14] -rw-r--r-- 2 boinc boinc    542880 Jul 26 19:53 input.tar.gz
[2025-07-26 23:13:14] -rw------- 1 boinc boinc 210268498 Jul 26 23:12 HITS.pool.root.1
[2025-07-26 23:13:14] -rw------- 1 boinc boinc   1454080 Jul 26 23:13 result.tar.gz
23:13:16 (454504): run_atlas exited; CPU time 46433.682689
23:13:16 (454504): called boinc_finish(0)

</stderr_txt>
]]>

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