Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:11:18 (19940): wrapper (7.7.26015): starting
00:11:18 (19940): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 00:11:18] Arguments: --nthreads 8
[2025-07-25 00:11:18] Threads: 8
[2025-07-25 00:11:18] Checking for CVMFS
[2025-07-25 00:11:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 00:11:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 00:11:20] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 00:11:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 00:11:21] 2.11.2.0 20313 105972 107232 148717 1 109 16970444 25165824 4097 130560 0 71913942 99.854 51560339 5410 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-25 00:11:21] CVMFS is ok
[2025-07-25 00:11:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 00:11:21] Checking for apptainer binary...
[2025-07-25 00:11:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 00:11:21] Running /usr/bin/apptainer --version
[2025-07-25 00:11:21] apptainer version 1.3.2-1.el7
[2025-07-25 00:11:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 00:11:23] cg-vwn236.simple-grid.lan
[2025-07-25 00:11:23] apptainer works
[2025-07-25 00:11:23] Set ATHENA_PROC_NUMBER=8
[2025-07-25 00:11:23] Set ATHENA_CORE_NUMBER=8
[2025-07-25 00:11:23] Starting ATLAS job with PandaID=6744791725
[2025-07-25 00:11:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 07:31:24]  *** The last 200 lines of the pilot log: ***
[2025-07-25 07:31:24] 2025-07-25 04:14:23,474 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 07:31:24] 2025-07-25 04:14:23,474 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 07:31:24] 2025-07-25 04:14:23,481 | INFO     | fitting pss+swap vs Time
[2025-07-25 07:31:24] 2025-07-25 04:14:23,482 | INFO     | sum of square deviations: 13872669410.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,486 | INFO     | sum of deviations: 59070366443.000015
[2025-07-25 07:31:24] 2025-07-25 04:14:23,486 | INFO     | mean x: 1753405956.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,486 | INFO     | mean y: 2531434.0507042254
[2025-07-25 07:31:24] 2025-07-25 04:14:23,487 | INFO     | -- intersect: -7463539390.760998
[2025-07-25 07:31:24] 2025-07-25 04:14:23,487 | INFO     | intersect: -7463539390.760998
[2025-07-25 07:31:24] 2025-07-25 04:14:23,487 | INFO     | chi2: 2.5655382357111116
[2025-07-25 07:31:24] 2025-07-25 04:14:23,488 | INFO     | sum of square deviations: 13294714387.5
[2025-07-25 07:31:24] 2025-07-25 04:14:23,491 | INFO     | sum of deviations: 81553069373.50002
[2025-07-25 07:31:24] 2025-07-25 04:14:23,492 | INFO     | mean x: 1753405803.5
[2025-07-25 07:31:24] 2025-07-25 04:14:23,492 | INFO     | mean y: 2537294.1057142857
[2025-07-25 07:31:24] 2025-07-25 04:14:23,492 | INFO     | -- intersect: -10753287988.397598
[2025-07-25 07:31:24] 2025-07-25 04:14:23,492 | INFO     | intersect: -10753287988.397598
[2025-07-25 07:31:24] 2025-07-25 04:14:23,493 | INFO     | chi2: 1.7927730240818707
[2025-07-25 07:31:24] 2025-07-25 04:14:23,493 | INFO     | current chi2=1.7927730240818707 (change=30.120978158606444 %)
[2025-07-25 07:31:24] 2025-07-25 04:14:23,493 | INFO     | sum of square deviations: 12733038740.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,497 | INFO     | sum of deviations: 79785747696.99997
[2025-07-25 07:31:24] 2025-07-25 04:14:23,497 | INFO     | mean x: 1753405651.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,497 | INFO     | mean y: 2536814.231884058
[2025-07-25 07:31:24] 2025-07-25 04:14:23,498 | INFO     | -- intersect: -10984375558.986889
[2025-07-25 07:31:24] 2025-07-25 04:14:23,498 | INFO     | intersect: -10984375558.986889
[2025-07-25 07:31:24] 2025-07-25 04:14:23,498 | INFO     | chi2: 1.7931867642862034
[2025-07-25 07:31:24] 2025-07-25 04:14:23,498 | INFO     | current chi2=1.7931867642862034 (change=-0.023078225674697507 %)
[2025-07-25 07:31:24] 2025-07-25 04:14:23,498 | INFO     | right removable region: 344
[2025-07-25 07:31:24] 2025-07-25 04:14:23,499 | INFO     | sum of square deviations: 13294714387.5
[2025-07-25 07:31:24] 2025-07-25 04:14:23,503 | INFO     | sum of deviations: -7724262860.000004
[2025-07-25 07:31:24] 2025-07-25 04:14:23,503 | INFO     | mean x: 1753406108.5
[2025-07-25 07:31:24] 2025-07-25 04:14:23,503 | INFO     | mean y: 2548971.9257142856
[2025-07-25 07:31:24] 2025-07-25 04:14:23,503 | INFO     | -- intersect: 1021282378.8741068
[2025-07-25 07:31:24] 2025-07-25 04:14:23,503 | INFO     | intersect: 1021282378.8741068
[2025-07-25 07:31:24] 2025-07-25 04:14:23,504 | INFO     | chi2: 0.883252365310547
[2025-07-25 07:31:24] 2025-07-25 04:14:23,504 | INFO     | current chi2=0.883252365310547 (change=65.57243415763287 %)
[2025-07-25 07:31:24] 2025-07-25 04:14:23,505 | INFO     | sum of square deviations: 12733038740.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,508 | INFO     | sum of deviations: -23925876036.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,509 | INFO     | mean x: 1753406261.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,509 | INFO     | mean y: 2553361.2579710144
[2025-07-25 07:31:24] 2025-07-25 04:14:23,509 | INFO     | -- intersect: 3297272061.016852
[2025-07-25 07:31:24] 2025-07-25 04:14:23,509 | INFO     | intersect: 3297272061.016852
[2025-07-25 07:31:24] 2025-07-25 04:14:23,509 | INFO     | chi2: 0.8006930842475998
[2025-07-25 07:31:24] 2025-07-25 04:14:23,510 | INFO     | current chi2=0.8006930842475998 (change=9.347190486596633 %)
[2025-07-25 07:31:24] 2025-07-25 04:14:23,510 | INFO     | left removable region: 20
[2025-07-25 07:31:24] 2025-07-25 04:14:23,510 | INFO     | sum of square deviations: 10546523325.0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,513 | INFO     | sum of deviations: -4451655376.999999
[2025-07-25 07:31:24] 2025-07-25 04:14:23,514 | INFO     | mean x: 1753406230.5
[2025-07-25 07:31:24] 2025-07-25 04:14:23,514 | INFO     | mean y: 2560383.4197530863
[2025-07-25 07:31:24] 2025-07-25 04:14:23,514 | INFO     | -- intersect: 742667813.4737823
[2025-07-25 07:31:24] 2025-07-25 04:14:23,514 | INFO     | intersect: 742667813.4737823
[2025-07-25 07:31:24] 2025-07-25 04:14:23,515 | INFO     | chi2: 0.01190053346640685
[2025-07-25 07:31:24] 2025-07-25 04:14:23,515 | INFO     | -- intersect: 742667813.4737823
[2025-07-25 07:31:24] 2025-07-25 04:14:23,515 | INFO     | current memory leak: -0.42 B/s (using 324 data points, chi2=0.01)
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | ..............................
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | . Timing measurements:
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | . get job = 0 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | . initial setup = 2 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | . payload setup = 13 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | . stage-in = 0 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | . payload execution = 21625 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,516 | INFO     | . stage-out = 3 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,517 | INFO     | . log creation = 1 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,517 | INFO     | ..............................
[2025-07-25 07:31:24] 2025-07-25 04:14:23,668 | INFO     | 
[2025-07-25 07:31:24] 2025-07-25 04:14:23,668 | INFO     | job summary report
[2025-07-25 07:31:24] 2025-07-25 04:14:23,668 | INFO     | --------------------------------------------------
[2025-07-25 07:31:24] 2025-07-25 04:14:23,668 | INFO     | PanDA job id: 6744791725
[2025-07-25 07:31:24] 2025-07-25 04:14:23,668 | INFO     | task id: 45697472
[2025-07-25 07:31:24] 2025-07-25 04:14:23,668 | INFO     | errors: (none)
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | pilot state: finished 
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | transexitcode: 0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | exeerrorcode: 0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | exeerrordiag: 
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | exitcode: 0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | exitmsg: OK
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | cpuconsumptiontime: 82955 s
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | nevents: 400
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | neventsw: 0
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | pid: 30574
[2025-07-25 07:31:24] 2025-07-25 04:14:23,669 | INFO     | pgrp: 30574
[2025-07-25 07:31:24] 2025-07-25 04:14:23,670 | INFO     | corecount: 8
[2025-07-25 07:31:24] 2025-07-25 04:14:23,670 | INFO     | event service: False
[2025-07-25 07:31:24] 2025-07-25 04:14:23,670 | INFO     | sizes: {0: 2397491, 1: 2397491, 8: 2397781, 12: 2397809, 21644: 2431113, 21648: 2440297, 21739: 2440435}
[2025-07-25 07:31:24] 2025-07-25 04:14:23,670 | INFO     | --------------------------------------------------
[2025-07-25 07:31:24] 2025-07-25 04:14:23,670 | INFO     | 
[2025-07-25 07:31:24] 2025-07-25 04:14:23,670 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-07-25 07:31:24] 2025-07-25 04:14:24,055 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,057 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 07:31:24] 2025-07-25 04:14:24,058 | INFO     | job 6744791725 has completed (purged errors)
[2025-07-25 07:31:24] 2025-07-25 04:14:24,058 | INFO     | overall cleanup function is called
[2025-07-25 07:31:24] 2025-07-25 04:14:25,068 | INFO     | --- collectZombieJob: --- 10, [30574]
[2025-07-25 07:31:24] 2025-07-25 04:14:25,068 | INFO     | zombie collector waiting for pid 30574
[2025-07-25 07:31:24] 2025-07-25 04:14:25,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 07:31:24] 2025-07-25 04:14:25,068 | INFO     | collected zombie processes
[2025-07-25 07:31:24] 2025-07-25 04:14:25,068 | INFO     | will attempt to kill all subprocesses of pid=30574
[2025-07-25 07:31:24] 2025-07-25 04:14:25,191 | INFO     | process IDs to be killed: [30574] (in reverse order)
[2025-07-25 07:31:24] 2025-07-25 04:14:26,212 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 07:31:24] 2025-07-25 04:14:26,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 07:31:24] 2025-07-25 04:14:26,216 | INFO     | did not find any defunct processes belonging to 30574
[2025-07-25 07:31:24] 2025-07-25 04:14:26,219 | INFO     | did not find any defunct processes belonging to 30574
[2025-07-25 07:31:24] 2025-07-25 04:14:26,219 | INFO     | ready for new job
[2025-07-25 07:31:24] 2025-07-25 04:14:26,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 07:31:24] 2025-07-25 04:14:26,222 | INFO     | ***************************************
[2025-07-25 07:31:24] 2025-07-25 04:14:26,222 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 07:31:24] 2025-07-25 04:14:26,222 | INFO     | ***************************************
[2025-07-25 07:31:24] 2025-07-25 04:14:26,222 | INFO     | 
[2025-07-25 07:31:24] 2025-07-25 04:14:26,223 | INFO     | pilot is running in a VM
[2025-07-25 07:31:24] 2025-07-25 04:14:26,223 | INFO     | architecture information:
[2025-07-25 07:31:24] 2025-07-25 04:14:26,243 | INFO     | executing command: cat /etc/os-release
[2025-07-25 07:31:24] 2025-07-25 04:14:26,557 | INFO     | cat /etc/os-release:
[2025-07-25 07:31:24] NAME="CentOS Linux"
[2025-07-25 07:31:24] VERSION="7 (Core)"
[2025-07-25 07:31:24] ID="centos"
[2025-07-25 07:31:24] ID_LIKE="rhel fedora"
[2025-07-25 07:31:24] VERSION_ID="7"
[2025-07-25 07:31:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 07:31:24] ANSI_COLOR="0;31"
[2025-07-25 07:31:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 07:31:24] HOME_URL="https://www.centos.org/"
[2025-07-25 07:31:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 07:31:24] 
[2025-07-25 07:31:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 07:31:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 07:31:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 07:31:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 07:31:24] 
[2025-07-25 07:31:24] 2025-07-25 04:14:26,558 | INFO     | ***************************************
[2025-07-25 07:31:24] 2025-07-25 04:14:27,061 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-07-25 07:31:24] 2025-07-25 04:14:27,220 | INFO     | sufficient remaining disk space (496173580288 B)
[2025-07-25 07:31:24] 2025-07-25 04:14:27,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 07:31:24] 2025-07-25 04:14:27,221 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 07:31:24] 2025-07-25 04:14:27,221 | INFO     | update_server=False
[2025-07-25 07:31:24] 2025-07-25 04:14:27,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 07:31:24] 2025-07-25 04:14:27,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 07:31:24] 2025-07-25 04:14:27,223 | INFO     | aborting loop
[2025-07-25 07:31:24] 2025-07-25 04:14:27,594 | INFO     | all data control threads have been joined
[2025-07-25 07:31:24] 2025-07-25 04:14:28,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 07:31:24] 2025-07-25 04:14:28,227 | INFO     | [job] retrieve thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,229 | INFO     | [job] job monitor thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,428 | INFO     | all job control threads have been joined
[2025-07-25 07:31:24] 2025-07-25 04:14:28,536 | INFO     | [job] validate thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,569 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,578 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,600 | INFO     | [data] control thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,657 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,661 | INFO     | all payload control threads have been joined
[2025-07-25 07:31:24] 2025-07-25 04:14:28,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 07:31:24] 2025-07-25 04:14:28,760 | INFO     | [data] copytool_in thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:28,967 | INFO     | [payload] validate_post thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:29,156 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:29,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 07:31:24] 2025-07-25 04:14:29,434 | INFO     | [job] control thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:29,502 | INFO     | [payload] failed_post thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:29,667 | INFO     | [payload] control thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:29,688 | INFO     | [job] queue monitor thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:30,093 | INFO     | [data] copytool_out thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:33,175 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 07:31:24] 2025-07-25 04:14:34,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187463677760)>', '<ExcThread(monitor, started 140187153704704)>']
[2025-07-25 07:31:24] 2025-07-25 04:14:39,458 | INFO     | all workflow threads have been joined
[2025-07-25 07:31:24] 2025-07-25 04:14:39,458 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 07:31:24] 2025-07-25 04:14:39,458 | INFO     | traces error code: 0
[2025-07-25 07:31:24] 2025-07-25 04:14:39,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 07:31:24] 2025-07-25 04:14:57,187 | INFO     | PID=23993 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 07:31:24] 2025-07-25 04:14:57,188 | INFO     | .. there are 9 such processes running
[2025-07-25 07:31:24] 2025-07-25 04:14:57,189 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 07:31:24] 2025-07-25 04:14:57,189 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 07:31:24] 2025-07-25 04:14:57,189 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 07:31:24] 2025-07-25 04:14:57,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 07:31:24] 2025-07-25 04:14:57,189 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 07:31:24] 2025-07-25 04:14:57,189 | INFO     | [monitor] control thread has ended
[2025-07-25 07:31:24] 2025-07-25 04:14:57,592 [wrapper] ==== pilot stdout END ====
[2025-07-25 07:31:24] 2025-07-25 04:14:57,707 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 07:31:24] 2025-07-25 04:14:57,817 [wrapper] pilotpid: 23993
[2025-07-25 07:31:24] 2025-07-25 04:14:57,926 [wrapper] Pilot exit status: 0
[2025-07-25 07:31:24] 2025-07-25 04:14:58,323 [wrapper] pandaids: 6744791725
[2025-07-25 07:31:24] 2025-07-25 04:14:59,346 [wrapper] cleanup supervisor_pilot 17090 23994
[2025-07-25 07:31:24] 2025-07-25 04:14:59,449 [wrapper] Test setup, not cleaning
[2025-07-25 07:31:24] 2025-07-25 04:14:59,555 [wrapper] apfmon messages muted
[2025-07-25 07:31:24] 2025-07-25 04:14:59,673 [wrapper] ==== wrapper stdout END ====
[2025-07-25 07:31:24] 2025-07-25 04:14:59,778 [wrapper] ==== wrapper stderr END ====
[2025-07-25 07:31:24]  *** Error codes and diagnostics ***
[2025-07-25 07:31:24]     "exeErrorCode": 0,
[2025-07-25 07:31:24]     "exeErrorDiag": "",
[2025-07-25 07:31:24]     "pilotErrorCode": 0,
[2025-07-25 07:31:24]     "pilotErrorDiag": "",
[2025-07-25 07:31:24]  *** Listing of results directory ***
[2025-07-25 07:31:24] total 603340
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc    530466 Jul 24 17:24 pilot3.tar.gz
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc      5112 Jul 24 17:49 queuedata.json
[2025-07-25 07:31:24] -rwx------. 1 boinc boinc     36292 Jul 24 17:50 runpilot2-wrapper.sh
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc       100 Jul 25 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 07:31:24] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 00:11 run_atlas
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc       105 Jul 25 00:11 job.xml
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc      6391 Jul 25 00:11 init_data.xml
[2025-07-25 07:31:24] -rw-r--r--. 2 boinc boinc 328690493 Jul 25 00:11 EVNT.45697470._000025.pool.root.1
[2025-07-25 07:31:24] -rw-r--r--. 2 boinc boinc     15095 Jul 25 00:11 start_atlas.sh
[2025-07-25 07:31:24] drwxrwx--x. 2 boinc boinc        68 Jul 25 00:11 shared
[2025-07-25 07:31:24] -rw-r--r--. 2 boinc boinc    542908 Jul 25 00:11 input.tar.gz
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc         0 Jul 25 00:11 boinc_lockfile
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc      2610 Jul 25 00:11 pandaJob.out
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc    979701 Jul 25 00:11 agis_schedconf.cvmfs.json
[2025-07-25 07:31:24] drwx------. 4 boinc boinc      4096 Jul 25 00:11 pilot3
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc 280654894 Jul 25 06:11 HITS.45697472._006480.pool.root.1
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc       531 Jul 25 06:11 boinc_task_state.xml
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc      1035 Jul 25 06:12 memory_monitor_summary.json
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc   1593052 Jul 25 06:12 agis_ddmendpoints.agis.ALL.json
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc    447150 Jul 25 06:12 log.45697472._006480.job.log.tgz.1
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc      7774 Jul 25 06:14 heartbeat.json
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc        95 Jul 25 06:14 pilot_heartbeat.json
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc       890 Jul 25 06:14 pilotlog.txt
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc   1858585 Jul 25 06:14 log.45697472._006480.job.log.1
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc       357 Jul 25 06:15 output.list
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc       620 Jul 25 06:15 runtime_log
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc   2324480 Jul 25 06:15 result.tar.gz
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc      8674 Jul 25 06:15 runtime_log.err
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc       658 Jul 25 06:15 oLLKDmVODz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmYaMLDmW26uDm.diag
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc      8192 Jul 25 07:31 boinc_mmap_file
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc        28 Jul 25 07:31 wrapper_checkpoint.txt
[2025-07-25 07:31:24] -rw-r--r--. 1 boinc boinc     20570 Jul 25 07:31 stderr.txt
[2025-07-25 07:31:24] HITS file was successfully produced:
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc 280654894 Jul 25 06:11 shared/HITS.pool.root.1
[2025-07-25 07:31:24]  *** Contents of shared directory: ***
[2025-07-25 07:31:24] total 597888
[2025-07-25 07:31:24] -rw-r--r--. 2 boinc boinc 328690493 Jul 25 00:11 ATLAS.root_0
[2025-07-25 07:31:24] -rw-r--r--. 2 boinc boinc     15095 Jul 25 00:11 start_atlas.sh
[2025-07-25 07:31:24] -rw-r--r--. 2 boinc boinc    542908 Jul 25 00:11 input.tar.gz
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc 280654894 Jul 25 06:11 HITS.pool.root.1
[2025-07-25 07:31:24] -rw-------. 1 boinc boinc   2324480 Jul 25 06:15 result.tar.gz
07:31:26 (19940): run_atlas exited; CPU time 83225.690287
07:31:26 (19940): called boinc_finish(0)

</stderr_txt>
]]>

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