Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:26:06 (2286758): wrapper (7.7.26015): starting
10:26:06 (2286758): wrapper: running run_atlas (--nthreads 10)
[2025-07-24 10:26:06] Arguments: --nthreads 10
[2025-07-24 10:26:06] Threads: 10
[2025-07-24 10:26:06] Checking for CVMFS
[2025-07-24 10:26:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 10:26:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 10:26:07] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 10:26:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 10:26:08] 2.13.0.0 1969590 14180 290356 148705 1 324 29452463 32935936 13060 16776704 0 46709335 99.498 64535069 27936 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 10:26:08] CVMFS is ok
[2025-07-24 10:26:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 10:26:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 10:26:08] Further information can be found at the LHC@home message board.
[2025-07-24 10:26:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 10:26:08] Checking for apptainer binary...
[2025-07-24 10:26:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 10:26:08] Running /usr/bin/apptainer --version
[2025-07-24 10:26:08] apptainer version 1.4.1-1.el9
[2025-07-24 10:26:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 10:26:09] c-8-36.aglt2.org
[2025-07-24 10:26:09] apptainer works
[2025-07-24 10:26:09] Set ATHENA_PROC_NUMBER=10
[2025-07-24 10:26:09] Set ATHENA_CORE_NUMBER=10
[2025-07-24 10:26:09] Starting ATLAS job with PandaID=6744717410
[2025-07-24 10:26:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 15:48:49]  *** The last 200 lines of the pilot log: ***
[2025-07-24 15:48:49] 2025-07-24 19:48:11,517 | INFO     | monitor loop #1045: job 0:6744717410 is in state 'finished'
[2025-07-24 15:48:49] 2025-07-24 19:48:11,517 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,026 | INFO     | monitor loop #1046: job 0:6744717410 is in state 'finished'
[2025-07-24 15:48:49] 2025-07-24 19:48:14,026 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,334 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 15:48:49] 2025-07-24 19:48:14,347 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.105675
[2025-07-24 15:48:49] 2025-07-24 19:48:14,370 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744717410/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,371 | INFO     | extracted standard info from prmon json
[2025-07-24 15:48:49] 2025-07-24 19:48:14,372 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 15:48:49] 2025-07-24 19:48:14,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 15:48:49] 2025-07-24 19:48:14,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 15:48:49] 2025-07-24 19:48:14,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 15:48:49] 2025-07-24 19:48:14,396 | INFO     | fitting pss+swap vs Time
[2025-07-24 15:48:49] 2025-07-24 19:48:14,411 | INFO     | sum of square deviations: 9417070915.384573
[2025-07-24 15:48:49] 2025-07-24 19:48:14,414 | INFO     | sum of deviations: -5517401366.538464
[2025-07-24 15:48:49] 2025-07-24 19:48:14,427 | INFO     | mean x: 1753376918.7692308
[2025-07-24 15:48:49] 2025-07-24 19:48:14,427 | INFO     | mean y: 2271624.5897435895
[2025-07-24 15:48:49] 2025-07-24 19:48:14,428 | INFO     | -- intersect: 1029563899.9266429
[2025-07-24 15:48:49] 2025-07-24 19:48:14,428 | INFO     | intersect: 1029563899.9266429
[2025-07-24 15:48:49] 2025-07-24 19:48:14,428 | INFO     | chi2: 2.895763381340895
[2025-07-24 15:48:49] 2025-07-24 19:48:14,429 | INFO     | sum of square deviations: 8971601452.345339
[2025-07-24 15:48:49] 2025-07-24 19:48:14,431 | INFO     | sum of deviations: 158113667.71658918
[2025-07-24 15:48:49] 2025-07-24 19:48:14,432 | INFO     | mean x: 1753376766.2833877
[2025-07-24 15:48:49] 2025-07-24 19:48:14,432 | INFO     | mean y: 2273564.003257329
[2025-07-24 15:48:49] 2025-07-24 19:48:14,432 | INFO     | -- intersect: -28627589.250005554
[2025-07-24 15:48:49] 2025-07-24 19:48:14,432 | INFO     | intersect: -28627589.250005554
[2025-07-24 15:48:49] 2025-07-24 19:48:14,433 | INFO     | chi2: 2.8844719147553923
[2025-07-24 15:48:49] 2025-07-24 19:48:14,433 | INFO     | current chi2=2.8844719147553923 (change=0.3899305674717822 %)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,433 | INFO     | right removable region: 306
[2025-07-24 15:48:49] 2025-07-24 19:48:14,433 | INFO     | sum of square deviations: 8971397587.198753
[2025-07-24 15:48:49] 2025-07-24 19:48:14,436 | INFO     | sum of deviations: -66185731231.83385
[2025-07-24 15:48:49] 2025-07-24 19:48:14,437 | INFO     | mean x: 1753377071.2899022
[2025-07-24 15:48:49] 2025-07-24 19:48:14,437 | INFO     | mean y: 2292301.5374592836
[2025-07-24 15:48:49] 2025-07-24 19:48:14,437 | INFO     | -- intersect: 12937684191.207201
[2025-07-24 15:48:49] 2025-07-24 19:48:14,437 | INFO     | intersect: 12937684191.207201
[2025-07-24 15:48:49] 2025-07-24 19:48:14,438 | INFO     | chi2: 0.8205425550810576
[2025-07-24 15:48:49] 2025-07-24 19:48:14,438 | INFO     | current chi2=0.8205425550810576 (change=71.66403303639049 %)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,438 | INFO     | sum of square deviations: 8540003596.241754
[2025-07-24 15:48:49] 2025-07-24 19:48:14,441 | INFO     | sum of deviations: -80999677910.60599
[2025-07-24 15:48:49] 2025-07-24 19:48:14,441 | INFO     | mean x: 1753377223.8112583
[2025-07-24 15:48:49] 2025-07-24 19:48:14,441 | INFO     | mean y: 2297529.8841059604
[2025-07-24 15:48:49] 2025-07-24 19:48:14,442 | INFO     | -- intersect: 16632617269.67968
[2025-07-24 15:48:49] 2025-07-24 19:48:14,442 | INFO     | intersect: 16632617269.67968
[2025-07-24 15:48:49] 2025-07-24 19:48:14,442 | INFO     | chi2: 0.6594243518776707
[2025-07-24 15:48:49] 2025-07-24 19:48:14,442 | INFO     | current chi2=0.6594243518776707 (change=19.63556944191283 %)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,443 | INFO     | left removable region: 20
[2025-07-24 15:48:49] 2025-07-24 19:48:14,443 | INFO     | sum of square deviations: 7253280625.258766
[2025-07-24 15:48:49] 2025-07-24 19:48:14,446 | INFO     | sum of deviations: -59446230420.18179
[2025-07-24 15:48:49] 2025-07-24 19:48:14,446 | INFO     | mean x: 1753377345.8251748
[2025-07-24 15:48:49] 2025-07-24 19:48:14,446 | INFO     | mean y: 2294059.6363636362
[2025-07-24 15:48:49] 2025-07-24 19:48:14,446 | INFO     | -- intersect: 14372574088.575901
[2025-07-24 15:48:49] 2025-07-24 19:48:14,446 | INFO     | intersect: 14372574088.575901
[2025-07-24 15:48:49] 2025-07-24 19:48:14,447 | INFO     | chi2: 0.5783315079882071
[2025-07-24 15:48:49] 2025-07-24 19:48:14,447 | INFO     | -- intersect: 14372574088.575901
[2025-07-24 15:48:49] 2025-07-24 19:48:14,447 | INFO     | current memory leak: -8.20 B/s (using 286 data points, chi2=0.58)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,448 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,449 | INFO     | ..............................
[2025-07-24 15:48:49] 2025-07-24 19:48:14,449 | INFO     | . Timing measurements:
[2025-07-24 15:48:49] 2025-07-24 19:48:14,449 | INFO     | . get job = 0 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,449 | INFO     | . initial setup = 6 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,449 | INFO     | . payload setup = 44 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,449 | INFO     | . stage-in = 0 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,450 | INFO     | . payload execution = 19053 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,450 | INFO     | . stage-out = 5 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,450 | INFO     | . log creation = 0 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,450 | INFO     | ..............................
[2025-07-24 15:48:49] 2025-07-24 19:48:14,644 | INFO     | 
[2025-07-24 15:48:49] 2025-07-24 19:48:14,645 | INFO     | job summary report
[2025-07-24 15:48:49] 2025-07-24 19:48:14,645 | INFO     | --------------------------------------------------
[2025-07-24 15:48:49] 2025-07-24 19:48:14,645 | INFO     | PanDA job id: 6744717410
[2025-07-24 15:48:49] 2025-07-24 19:48:14,645 | INFO     | task id: 45743349
[2025-07-24 15:48:49] 2025-07-24 19:48:14,645 | INFO     | errors: (none)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,645 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 15:48:49] 2025-07-24 19:48:14,645 | INFO     | pilot state: finished 
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | transexitcode: 0
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | exeerrorcode: 0
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | exeerrordiag: 
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | exitcode: 0
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | exitmsg: OK
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | cpuconsumptiontime: 56667 s
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | nevents: 400
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | neventsw: 0
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | pid: 2303169
[2025-07-24 15:48:49] 2025-07-24 19:48:14,646 | INFO     | pgrp: 2303169
[2025-07-24 15:48:49] 2025-07-24 19:48:14,647 | INFO     | corecount: 10
[2025-07-24 15:48:49] 2025-07-24 19:48:14,647 | INFO     | event service: False
[2025-07-24 15:48:49] 2025-07-24 19:48:14,647 | INFO     | sizes: {0: 2397233, 1: 2397289, 2: 2397345, 3: 2397516, 4: 2397544, 15: 2397572, 26: 2397728, 37: 2397756, 48: 2397784, 50: 2398074, 59: 2398102, 19100: 2430814, 1
[2025-07-24 15:48:49] 2025-07-24 19:48:14,647 | INFO     | --------------------------------------------------
[2025-07-24 15:48:49] 2025-07-24 19:48:14,647 | INFO     | 
[2025-07-24 15:48:49] 2025-07-24 19:48:14,647 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 15:48:49] 2025-07-24 19:48:14,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,810 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 15:48:49] 2025-07-24 19:48:14,812 | INFO     | job 6744717410 has completed (purged errors)
[2025-07-24 15:48:49] 2025-07-24 19:48:14,813 | INFO     | overall cleanup function is called
[2025-07-24 15:48:49] 2025-07-24 19:48:15,830 | INFO     | --- collectZombieJob: --- 10, [2303169]
[2025-07-24 15:48:49] 2025-07-24 19:48:15,831 | INFO     | zombie collector waiting for pid 2303169
[2025-07-24 15:48:49] 2025-07-24 19:48:15,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 15:48:49] 2025-07-24 19:48:15,831 | INFO     | collected zombie processes
[2025-07-24 15:48:49] 2025-07-24 19:48:15,831 | INFO     | will attempt to kill all subprocesses of pid=2303169
[2025-07-24 15:48:49] 2025-07-24 19:48:16,620 | INFO     | process IDs to be killed: [2303169] (in reverse order)
[2025-07-24 15:48:49] 2025-07-24 19:48:16,785 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 15:48:49] 2025-07-24 19:48:16,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 15:48:49] 2025-07-24 19:48:16,811 | INFO     | did not find any defunct processes belonging to 2303169
[2025-07-24 15:48:49] 2025-07-24 19:48:16,824 | INFO     | did not find any defunct processes belonging to 2303169
[2025-07-24 15:48:49] 2025-07-24 19:48:16,824 | INFO     | ready for new job
[2025-07-24 15:48:49] 2025-07-24 19:48:16,825 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 15:48:49] 2025-07-24 19:48:16,827 | INFO     | ***************************************
[2025-07-24 15:48:49] 2025-07-24 19:48:16,827 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 15:48:49] 2025-07-24 19:48:16,827 | INFO     | ***************************************
[2025-07-24 15:48:49] 2025-07-24 19:48:16,827 | INFO     | 
[2025-07-24 15:48:49] 2025-07-24 19:48:16,842 | INFO     | architecture information:
[2025-07-24 15:48:49] 2025-07-24 19:48:16,846 | INFO     | executing command: cat /etc/os-release
[2025-07-24 15:48:49] 2025-07-24 19:48:16,895 | INFO     | cat /etc/os-release:
[2025-07-24 15:48:49] NAME="CentOS Linux"
[2025-07-24 15:48:49] VERSION="7 (Core)"
[2025-07-24 15:48:49] ID="centos"
[2025-07-24 15:48:49] ID_LIKE="rhel fedora"
[2025-07-24 15:48:49] VERSION_ID="7"
[2025-07-24 15:48:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 15:48:49] ANSI_COLOR="0;31"
[2025-07-24 15:48:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 15:48:49] HOME_URL="https://www.centos.org/"
[2025-07-24 15:48:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 15:48:49] 
[2025-07-24 15:48:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 15:48:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 15:48:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 15:48:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 15:48:49] 
[2025-07-24 15:48:49] 2025-07-24 19:48:16,896 | INFO     | ***************************************
[2025-07-24 15:48:49] 2025-07-24 19:48:17,399 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 15:48:49] 2025-07-24 19:48:17,528 | INFO     | sufficient remaining disk space (76688654336 B)
[2025-07-24 15:48:49] 2025-07-24 19:48:17,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 15:48:49] 2025-07-24 19:48:17,529 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 15:48:49] 2025-07-24 19:48:17,530 | INFO     | update_server=False
[2025-07-24 15:48:49] 2025-07-24 19:48:17,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 15:48:49] 2025-07-24 19:48:17,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 15:48:49] 2025-07-24 19:48:17,557 | INFO     | aborting loop
[2025-07-24 15:48:49] 2025-07-24 19:48:18,376 | INFO     | all payload control threads have been joined
[2025-07-24 15:48:49] 2025-07-24 19:48:18,502 | INFO     | all job control threads have been joined
[2025-07-24 15:48:49] 2025-07-24 19:48:18,536 | INFO     | [job] retrieve thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:18,545 | INFO     | all data control threads have been joined
[2025-07-24 15:48:49] 2025-07-24 19:48:18,563 | INFO     | [job] job monitor thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:18,612 | INFO     | [job] validate thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:18,613 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:18,651 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 15:48:49] 2025-07-24 19:48:18,652 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 15:48:49] 2025-07-24 19:48:18,796 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:18,819 | INFO     | [payload] validate_post thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:18,911 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:19,175 | INFO     | [payload] failed_post thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:19,383 | INFO     | [payload] control thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:19,509 | INFO     | [job] control thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:19,552 | INFO     | [data] control thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:19,587 | INFO     | [data] copytool_in thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:19,607 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:19,663 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 15:48:49] 2025-07-24 19:48:20,660 | INFO     | [data] copytool_out thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:20,669 | INFO     | [job] queue monitor thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:22,659 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 15:48:49] 2025-07-24 19:48:24,300 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220113512256)>', '<ExcThread(monitor, started 140219365959424)>']
[2025-07-24 15:48:49] 2025-07-24 19:48:29,326 | INFO     | all workflow threads have been joined
[2025-07-24 15:48:49] 2025-07-24 19:48:29,326 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 15:48:49] 2025-07-24 19:48:29,327 | INFO     | traces error code: 0
[2025-07-24 15:48:49] 2025-07-24 19:48:29,327 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 15:48:49] 2025-07-24 19:48:47,049 | INFO     | PID=2291593 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 15:48:49] 2025-07-24 19:48:47,055 | INFO     | .. there are 25 such processes running
[2025-07-24 15:48:49] 2025-07-24 19:48:47,057 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 15:48:49] 2025-07-24 19:48:47,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 15:48:49] 2025-07-24 19:48:47,057 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 15:48:49] 2025-07-24 19:48:47,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 15:48:49] 2025-07-24 19:48:47,058 | INFO     | [monitor] control thread has ended
[2025-07-24 15:48:49] 2025-07-24 19:48:47,694 [wrapper] ==== pilot stdout END ====
[2025-07-24 15:48:49] 2025-07-24 19:48:47,749 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 15:48:49] 2025-07-24 19:48:47,792 [wrapper] pilotpid: 2291593
[2025-07-24 15:48:49] 2025-07-24 19:48:47,852 [wrapper] Pilot exit status: 0
[2025-07-24 15:48:49] 2025-07-24 19:48:48,009 [wrapper] pandaids: 6744717410
[2025-07-24 15:48:49] 2025-07-24 19:48:48,135 [wrapper] cleanup supervisor_pilot 3245344 2291594
[2025-07-24 15:48:49] 2025-07-24 19:48:48,166 [wrapper] Test setup, not cleaning
[2025-07-24 15:48:49] 2025-07-24 19:48:48,209 [wrapper] apfmon messages muted
[2025-07-24 15:48:49] 2025-07-24 19:48:48,249 [wrapper] ==== wrapper stdout END ====
[2025-07-24 15:48:49] 2025-07-24 19:48:48,295 [wrapper] ==== wrapper stderr END ====
[2025-07-24 15:48:49]  *** Error codes and diagnostics ***
[2025-07-24 15:48:49]     "exeErrorCode": 0,
[2025-07-24 15:48:49]     "exeErrorDiag": "",
[2025-07-24 15:48:49]     "pilotErrorCode": 0,
[2025-07-24 15:48:49]     "pilotErrorDiag": "",
[2025-07-24 15:48:49]  *** Listing of results directory ***
[2025-07-24 15:48:49] total 352664
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 09:27 pilot3.tar.gz
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 10:20 queuedata.json
[2025-07-24 15:48:49] -rwx------. 1 boincer umatlas     36292 Jul 24 10:21 runpilot2-wrapper.sh
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas       100 Jul 24 10:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 15:48:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 10:26 run_atlas
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas       105 Jul 24 10:26 job.xml
[2025-07-24 15:48:49] -rw-r--r--. 2 boincer umatlas 144989310 Jul 24 10:26 EVNT.45743347._000025.pool.root.1
[2025-07-24 15:48:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 10:26 start_atlas.sh
[2025-07-24 15:48:49] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 10:26 shared
[2025-07-24 15:48:49] -rw-r--r--. 2 boincer umatlas    542872 Jul 24 10:26 input.tar.gz
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas         0 Jul 24 10:26 boinc_lockfile
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas      2558 Jul 24 10:26 pandaJob.out
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas    979685 Jul 24 10:27 agis_schedconf.cvmfs.json
[2025-07-24 15:48:49] drwx------. 4 boincer umatlas      4096 Jul 24 10:27 pilot3
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas      6660 Jul 24 15:37 init_data.xml
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas 208502087 Jul 24 15:46 HITS.45743349._000379.pool.root.1
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas       531 Jul 24 15:47 boinc_task_state.xml
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas      1042 Jul 24 15:47 memory_monitor_summary.json
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas   1593052 Jul 24 15:47 agis_ddmendpoints.agis.ALL.json
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas    452122 Jul 24 15:47 log.45743349._000379.job.log.tgz.1
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas      7817 Jul 24 15:48 heartbeat.json
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 15:48 boinc_mmap_file
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas        28 Jul 24 15:48 wrapper_checkpoint.txt
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas        95 Jul 24 15:48 pilot_heartbeat.json
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas       823 Jul 24 15:48 pilotlog.txt
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas   1429017 Jul 24 15:48 log.45743349._000379.job.log.1
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas       357 Jul 24 15:48 output.list
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas       620 Jul 24 15:48 runtime_log
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas   1904640 Jul 24 15:48 result.tar.gz
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas      8653 Jul 24 15:48 runtime_log.err
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas       656 Jul 24 15:48 NxELDmG0Bz7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfIMLDmfSDvon.diag
[2025-07-24 15:48:49] -rw-r--r--. 1 boincer umatlas     21297 Jul 24 15:48 stderr.txt
[2025-07-24 15:48:49] HITS file was successfully produced:
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas 208502087 Jul 24 15:46 shared/HITS.pool.root.1
[2025-07-24 15:48:49]  *** Contents of shared directory: ***
[2025-07-24 15:48:49] total 347620
[2025-07-24 15:48:49] -rw-r--r--. 2 boincer umatlas 144989310 Jul 24 10:26 ATLAS.root_0
[2025-07-24 15:48:49] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 10:26 start_atlas.sh
[2025-07-24 15:48:49] -rw-r--r--. 2 boincer umatlas    542872 Jul 24 10:26 input.tar.gz
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas 208502087 Jul 24 15:46 HITS.pool.root.1
[2025-07-24 15:48:49] -rw-------. 1 boincer umatlas   1904640 Jul 24 15:48 result.tar.gz
15:48:50 (2286758): run_atlas exited; CPU time 57247.281340
15:48:50 (2286758): called boinc_finish(0)

</stderr_txt>
]]>

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