Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:56:30 (16682): wrapper (7.7.26015): starting
08:56:30 (16682): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 08:56:30] Arguments: --nthreads 8
[2025-07-24 08:56:30] Threads: 8
[2025-07-24 08:56:30] Checking for CVMFS
[2025-07-24 08:56:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 08:56:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 08:56:30] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 08:56:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 08:56:31] 2.11.2.0 5073 41443 383012 148699 1 188 12918521 18432001 1009 130560 0 99367402 99.445 139567246 66794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 08:56:31] CVMFS is ok
[2025-07-24 08:56:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 08:56:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 08:56:31] Further information can be found at the LHC@home message board.
[2025-07-24 08:56:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 08:56:31] Checking for apptainer binary...
[2025-07-24 08:56:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 08:56:31] Running /usr/bin/apptainer --version
[2025-07-24 08:56:31] apptainer version 1.3.2-1.el7
[2025-07-24 08:56:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 08:56:31] c-211-39.aglt2.org
[2025-07-24 08:56:31] apptainer works
[2025-07-24 08:56:31] Set ATHENA_PROC_NUMBER=8
[2025-07-24 08:56:31] Set ATHENA_CORE_NUMBER=8
[2025-07-24 08:56:31] Starting ATLAS job with PandaID=6741690817
[2025-07-24 08:56:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 10:09:44]  *** The last 200 lines of the pilot log: ***
[2025-07-24 10:09:44]  lfn=log.45697532._000110.job.log.tgz.1
[2025-07-24 10:09:44]  mtime=0
[2025-07-24 10:09:44]  protocol_id=None
[2025-07-24 10:09:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 10:09:44]  replicas=None
[2025-07-24 10:09:44]  scope=mc23_13p6TeV
[2025-07-24 10:09:44]  status=None
[2025-07-24 10:09:44]  status_code=0
[2025-07-24 10:09:44]  storage_token=
[2025-07-24 10:09:44]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6741690817/log.45697532._000110.job.log.tgz.1
[2025-07-24 10:09:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/a3/log.45697532._000110.job.log.tgz.1
[2025-07-24 10:09:44]  workdir=None
[2025-07-24 10:09:44] ]
[2025-07-24 10:09:44] 2025-07-24 14:09:09,957 | INFO     | transferring file log.45697532._000110.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6741690817/log.45697532._000110.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-24 10:09:44] 2025-07-24 14:09:09,957 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6741690817/log.45697532._000110.job.log.tgz.1 /tmp/boinchome/slots/2/log.45697532._000110.job
[2025-07-24 10:09:44] 2025-07-24 14:09:09,969 | INFO     | adding to output.list: log.45697532._000110.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9b/a3/log.45697532._000110.job.log.tg
[2025-07-24 10:09:44] 2025-07-24 14:09:09,969 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 10:09:44] 2025-07-24 14:09:09,969 | INFO     | summary of transferred files:
[2025-07-24 10:09:44] 2025-07-24 14:09:09,969 | INFO     |  -- lfn=log.45697532._000110.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 10:09:44] 2025-07-24 14:09:09,970 | INFO     | stage-out finished correctly
[2025-07-24 10:09:44] 2025-07-24 14:09:10,028 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 10:09:44] 2025-07-24 14:09:10,086 | INFO     | job 6741690817 has state=finished
[2025-07-24 10:09:44] 2025-07-24 14:09:10,087 | INFO     | preparing for final server update for job 6741690817 in state='finished'
[2025-07-24 10:09:44] 2025-07-24 14:09:10,087 | INFO     | this job has now completed (state=finished)
[2025-07-24 10:09:44] 2025-07-24 14:09:10,087 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 10:09:44] 2025-07-24 14:09:10,087 | INFO     | log transfer has been attempted: DONE
[2025-07-24 10:09:44] 2025-07-24 14:09:10,088 | INFO     | job 6741690817 has finished - writing final server update
[2025-07-24 10:09:44] 2025-07-24 14:09:10,088 | INFO     | total number of processed events: 400 (read)
[2025-07-24 10:09:44] 2025-07-24 14:09:10,088 | INFO     | executing command: lscpu
[2025-07-24 10:09:44] 2025-07-24 14:09:10,112 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 10:09:44] 2025-07-24 14:09:10,546 | INFO     | PID=20266 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 10:09:44] 2025-07-24 14:09:10,546 | INFO     | .. there are 2 such processes running
[2025-07-24 10:09:44] 2025-07-24 14:09:11,996 | INFO     | monitor loop #332: job 0:6741690817 is in state 'finished'
[2025-07-24 10:09:44] 2025-07-24 14:09:11,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 10:09:44] 2025-07-24 14:09:12,090 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 10:09:44] 2025-07-24 14:09:12,092 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2994.348999999997
[2025-07-24 10:09:44] 2025-07-24 14:09:12,098 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6741690817/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 10:09:44] 2025-07-24 14:09:12,099 | INFO     | extracted standard info from prmon json
[2025-07-24 10:09:44] 2025-07-24 14:09:12,099 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 10:09:44] 2025-07-24 14:09:12,099 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 10:09:44] 2025-07-24 14:09:12,099 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 10:09:44] 2025-07-24 14:09:12,099 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 10:09:44] 2025-07-24 14:09:12,100 | INFO     | fitting pss+swap vs Time
[2025-07-24 10:09:44] 2025-07-24 14:09:12,100 | INFO     | sum of square deviations: 81266640.0
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | sum of deviations: 736481517.5
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | mean x: 1753364043.5
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | mean y: 2549574.703125
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | -- intersect: -15887368003.860674
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | intersect: -15887368003.860674
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | chi2: 0.0004508492548122389
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | -- intersect: -15887368003.860674
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | current memory leak: 9.06 B/s (using 64 data points, chi2=0.00)
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | could have reported an average CPU frequency of 2994 MHz (6 samples)
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | ..............................
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | . Timing measurements:
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | . get job = 0 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | . initial setup = 1 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | . payload setup = 3 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | . stage-in = 0 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,101 | INFO     | . payload execution = 4331 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,102 | INFO     | . stage-out = 0 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,102 | INFO     | . log creation = 0 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,102 | INFO     | ..............................
[2025-07-24 10:09:44] 2025-07-24 14:09:12,346 | INFO     | 
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | job summary report
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | --------------------------------------------------
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | PanDA job id: 6741690817
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | task id: 45697532
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | errors: (none)
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | pilot state: finished 
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | transexitcode: 0
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | exeerrorcode: 0
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | exeerrordiag: 
[2025-07-24 10:09:44] 2025-07-24 14:09:12,347 | INFO     | exitcode: 0
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | exitmsg: OK
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | cpuconsumptiontime: 32694 s
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | nevents: 400
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | neventsw: 0
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | pid: 41012
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | pgrp: 41012
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | corecount: 8
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | event service: False
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | sizes: {0: 2397526, 2: 2397788, 11: 2397816, 4338: 2424091, 4339: 2433145, 4341: 2433283}
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | --------------------------------------------------
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | 
[2025-07-24 10:09:44] 2025-07-24 14:09:12,348 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,364 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 10:09:44] 2025-07-24 14:09:12,365 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,365 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 10:09:44] 2025-07-24 14:09:12,365 | INFO     | job 6741690817 has completed (purged errors)
[2025-07-24 10:09:44] 2025-07-24 14:09:12,365 | INFO     | overall cleanup function is called
[2025-07-24 10:09:44] 2025-07-24 14:09:13,371 | INFO     | --- collectZombieJob: --- 10, [41012]
[2025-07-24 10:09:44] 2025-07-24 14:09:13,372 | INFO     | zombie collector waiting for pid 41012
[2025-07-24 10:09:44] 2025-07-24 14:09:13,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 10:09:44] 2025-07-24 14:09:13,372 | INFO     | collected zombie processes
[2025-07-24 10:09:44] 2025-07-24 14:09:13,372 | INFO     | will attempt to kill all subprocesses of pid=41012
[2025-07-24 10:09:44] 2025-07-24 14:09:13,464 | INFO     | process IDs to be killed: [41012] (in reverse order)
[2025-07-24 10:09:44] 2025-07-24 14:09:13,506 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 10:09:44] 2025-07-24 14:09:13,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 10:09:44] 2025-07-24 14:09:13,510 | INFO     | did not find any defunct processes belonging to 41012
[2025-07-24 10:09:44] 2025-07-24 14:09:13,512 | INFO     | did not find any defunct processes belonging to 41012
[2025-07-24 10:09:44] 2025-07-24 14:09:13,512 | INFO     | ready for new job
[2025-07-24 10:09:44] 2025-07-24 14:09:13,512 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 10:09:44] 2025-07-24 14:09:13,513 | INFO     | ***************************************
[2025-07-24 10:09:44] 2025-07-24 14:09:13,513 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 10:09:44] 2025-07-24 14:09:13,513 | INFO     | ***************************************
[2025-07-24 10:09:44] 2025-07-24 14:09:13,513 | INFO     | 
[2025-07-24 10:09:44] 2025-07-24 14:09:13,515 | INFO     | architecture information:
[2025-07-24 10:09:44] 2025-07-24 14:09:13,516 | INFO     | executing command: cat /etc/os-release
[2025-07-24 10:09:44] 2025-07-24 14:09:13,521 | INFO     | cat /etc/os-release:
[2025-07-24 10:09:44] NAME="CentOS Linux"
[2025-07-24 10:09:44] VERSION="7 (Core)"
[2025-07-24 10:09:44] ID="centos"
[2025-07-24 10:09:44] ID_LIKE="rhel fedora"
[2025-07-24 10:09:44] VERSION_ID="7"
[2025-07-24 10:09:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 10:09:44] ANSI_COLOR="0;31"
[2025-07-24 10:09:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 10:09:44] HOME_URL="https://www.centos.org/"
[2025-07-24 10:09:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 10:09:44] 
[2025-07-24 10:09:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 10:09:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 10:09:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 10:09:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 10:09:44] 
[2025-07-24 10:09:44] 2025-07-24 14:09:13,522 | INFO     | ***************************************
[2025-07-24 10:09:44] 2025-07-24 14:09:14,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-24 10:09:44] 2025-07-24 14:09:14,036 | INFO     | sufficient remaining disk space (74804363264 B)
[2025-07-24 10:09:44] 2025-07-24 14:09:14,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 10:09:44] 2025-07-24 14:09:14,037 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 10:09:44] 2025-07-24 14:09:14,037 | INFO     | update_server=False
[2025-07-24 10:09:44] 2025-07-24 14:09:14,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 10:09:44] 2025-07-24 14:09:14,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 10:09:44] 2025-07-24 14:09:14,491 | INFO     | all job control threads have been joined
[2025-07-24 10:09:44] 2025-07-24 14:09:14,499 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-24 10:09:44] 2025-07-24 14:09:14,499 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-24 10:09:44] 2025-07-24 14:09:14,499 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 10:09:44] 2025-07-24 14:09:14,499 | INFO     | will abort loop
[2025-07-24 10:09:44] 2025-07-24 14:09:14,676 | INFO     | all payload control threads have been joined
[2025-07-24 10:09:44] 2025-07-24 14:09:14,788 | INFO     | job.realtimelogging is not enabled
[2025-07-24 10:09:44] 2025-07-24 14:09:15,003 | INFO     | all data control threads have been joined
[2025-07-24 10:09:44] 2025-07-24 14:09:15,042 | INFO     | [job] retrieve thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,042 | INFO     | [job] queue monitor thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,220 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,497 | INFO     | [job] control thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,504 | INFO     | [job] job monitor thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,536 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 10:09:44] 2025-07-24 14:09:15,622 | INFO     | [payload] failed_post thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,682 | INFO     | [payload] control thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,772 | INFO     | [data] copytool_in thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:15,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:16,009 | INFO     | [data] control thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:16,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 10:09:44] 2025-07-24 14:09:16,145 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:16,367 | INFO     | [job] validate thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:16,541 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:16,594 | INFO     | [payload] validate_post thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:17,541 | INFO     | [data] copytool_out thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:20,098 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 10:09:44] 2025-07-24 14:09:20,821 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715661449024)>', '<ExcThread(monitor, started 140714998490880)>']
[2025-07-24 10:09:44] 2025-07-24 14:09:25,847 | INFO     | all workflow threads have been joined
[2025-07-24 10:09:44] 2025-07-24 14:09:25,847 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 10:09:44] 2025-07-24 14:09:25,847 | INFO     | traces error code: 0
[2025-07-24 10:09:44] 2025-07-24 14:09:25,848 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 10:09:44] 2025-07-24 14:09:44,730 | INFO     | PID=20266 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 10:09:44] 2025-07-24 14:09:44,731 | INFO     | .. there are 2 such processes running
[2025-07-24 10:09:44] 2025-07-24 14:09:44,731 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 10:09:44] 2025-07-24 14:09:44,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 10:09:44] 2025-07-24 14:09:44,731 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 10:09:44] 2025-07-24 14:09:44,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 10:09:44] 2025-07-24 14:09:44,731 | INFO     | [monitor] control thread has ended
[2025-07-24 10:09:44] 2025-07-24 14:09:44,795 [wrapper] ==== pilot stdout END ====
[2025-07-24 10:09:44] 2025-07-24 14:09:44,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 10:09:44] 2025-07-24 14:09:44,798 [wrapper] pilotpid: 20266
[2025-07-24 10:09:44] 2025-07-24 14:09:44,799 [wrapper] Pilot exit status: 0
[2025-07-24 10:09:44] 2025-07-24 14:09:44,805 [wrapper] pandaids: 6741690817
[2025-07-24 10:09:44] 2025-07-24 14:09:44,835 [wrapper] cleanup supervisor_pilot 26895 20267
[2025-07-24 10:09:44] 2025-07-24 14:09:44,837 [wrapper] Test setup, not cleaning
[2025-07-24 10:09:44] 2025-07-24 14:09:44,839 [wrapper] apfmon messages muted
[2025-07-24 10:09:44] 2025-07-24 14:09:44,840 [wrapper] ==== wrapper stdout END ====
[2025-07-24 10:09:44] 2025-07-24 14:09:44,842 [wrapper] ==== wrapper stderr END ====
[2025-07-24 10:09:44]  *** Error codes and diagnostics ***
[2025-07-24 10:09:44]     "exeErrorCode": 0,
[2025-07-24 10:09:44]     "exeErrorDiag": "",
[2025-07-24 10:09:44]     "pilotErrorCode": 0,
[2025-07-24 10:09:44]     "pilotErrorDiag": "",
[2025-07-24 10:09:44]  *** Listing of results directory ***
[2025-07-24 10:09:44] total 596540
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas    530466 Jul 21 16:41 pilot3.tar.gz
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas      5112 Jul 21 16:54 queuedata.json
[2025-07-24 10:09:44] -rwx------ 1 boincer umatlas     36292 Jul 21 16:55 runpilot2-wrapper.sh
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas       100 Jul 24 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 10:09:44] -rwxr-xr-x 1 boincer umatlas      7986 Jul 24 08:56 run_atlas
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas       105 Jul 24 08:56 job.xml
[2025-07-24 10:09:44] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 08:56 start_atlas.sh
[2025-07-24 10:09:44] drwxrwx--x 2 boincer umatlas      4096 Jul 24 08:56 shared
[2025-07-24 10:09:44] -rw-r--r-- 2 boincer umatlas    542898 Jul 24 08:56 input.tar.gz
[2025-07-24 10:09:44] -rw-r--r-- 2 boincer umatlas 326797176 Jul 24 08:56 EVNT.45697530._000005.pool.root.1
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas         0 Jul 24 08:56 boinc_lockfile
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas      2608 Jul 24 08:56 pandaJob.out
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas    979599 Jul 24 08:56 agis_schedconf.cvmfs.json
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas   1593041 Jul 24 08:56 agis_ddmendpoints.agis.ALL.json
[2025-07-24 10:09:44] drwx------ 4 boincer umatlas      4096 Jul 24 08:56 pilot3
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas      6338 Jul 24 10:01 init_data.xml
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas 278707560 Jul 24 10:08 HITS.45697532._000110.pool.root.1
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas       529 Jul 24 10:09 boinc_task_state.xml
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas      1037 Jul 24 10:09 memory_monitor_summary.json
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas    299329 Jul 24 10:09 log.45697532._000110.job.log.tgz.1
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas      7782 Jul 24 10:09 heartbeat.json
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas      8192 Jul 24 10:09 boinc_mmap_file
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas        27 Jul 24 10:09 wrapper_checkpoint.txt
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas       820 Jul 24 10:09 pilotlog.txt
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas        95 Jul 24 10:09 pilot_heartbeat.json
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas    439402 Jul 24 10:09 log.45697532._000110.job.log.1
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas       357 Jul 24 10:09 output.list
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas       620 Jul 24 10:09 runtime_log
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas    757760 Jul 24 10:09 result.tar.gz
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas      8660 Jul 24 10:09 runtime_log.err
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas       658 Jul 24 10:09 QLpMDmliCy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmdMtKDm9uy8Rn.diag
[2025-07-24 10:09:44] -rw-r--r-- 1 boincer umatlas     21642 Jul 24 10:09 stderr.txt
[2025-07-24 10:09:44] HITS file was successfully produced:
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas 278707560 Jul 24 10:08 shared/HITS.pool.root.1
[2025-07-24 10:09:44]  *** Contents of shared directory: ***
[2025-07-24 10:09:44] total 592608
[2025-07-24 10:09:44] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 08:56 start_atlas.sh
[2025-07-24 10:09:44] -rw-r--r-- 2 boincer umatlas    542898 Jul 24 08:56 input.tar.gz
[2025-07-24 10:09:44] -rw-r--r-- 2 boincer umatlas 326797176 Jul 24 08:56 ATLAS.root_0
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas 278707560 Jul 24 10:08 HITS.pool.root.1
[2025-07-24 10:09:44] -rw------- 1 boincer umatlas    757760 Jul 24 10:09 result.tar.gz
10:09:46 (16682): run_atlas exited; CPU time 32312.019358
10:09:46 (16682): called boinc_finish(0)

</stderr_txt>
]]>

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