Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:56:18 (10772): wrapper (7.7.26015): starting
08:56:18 (10772): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 08:56:18] Arguments: --nthreads 8
[2025-07-24 08:56:18] Threads: 8
[2025-07-24 08:56:18] Checking for CVMFS
[2025-07-24 08:56:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 08:56:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 08:56:18] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 08:56:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 08:56:18] 2.11.2.0 5073 41443 382796 148699 1 188 12918521 18432001 917 130560 0 99349284 99.445 139567246 66794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 08:56:18] CVMFS is ok
[2025-07-24 08:56:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 08:56:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 08:56:18] Further information can be found at the LHC@home message board.
[2025-07-24 08:56:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 08:56:18] Checking for apptainer binary...
[2025-07-24 08:56:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 08:56:18] Running /usr/bin/apptainer --version
[2025-07-24 08:56:18] apptainer version 1.3.2-1.el7
[2025-07-24 08:56:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 08:56:18] c-211-39.aglt2.org
[2025-07-24 08:56:18] apptainer works
[2025-07-24 08:56:18] Set ATHENA_PROC_NUMBER=8
[2025-07-24 08:56:18] Set ATHENA_CORE_NUMBER=8
[2025-07-24 08:56:18] Starting ATLAS job with PandaID=6741708302
[2025-07-24 08:56:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 10:06:24]  *** The last 200 lines of the pilot log: ***
[2025-07-24 10:06:24]  is_tar=False
[2025-07-24 10:06:24]  lfn=log.45697453._000619.job.log.tgz.1
[2025-07-24 10:06:24]  mtime=0
[2025-07-24 10:06:24]  protocol_id=None
[2025-07-24 10:06:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 10:06:24]  replicas=None
[2025-07-24 10:06:24]  scope=mc23_13p6TeV
[2025-07-24 10:06:24]  status=None
[2025-07-24 10:06:24]  status_code=0
[2025-07-24 10:06:24]  storage_token=
[2025-07-24 10:06:24]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6741708302/log.45697453._000619.job.log.tgz.1
[2025-07-24 10:06:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/1e/log.45697453._000619.job.log.tgz.1
[2025-07-24 10:06:24]  workdir=None
[2025-07-24 10:06:24] ]
[2025-07-24 10:06:24] 2025-07-24 14:05:47,458 | INFO     | transferring file log.45697453._000619.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6741708302/log.45697453._000619.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-24 10:06:24] 2025-07-24 14:05:47,458 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6741708302/log.45697453._000619.job.log.tgz.1 /tmp/boinchome/slots/1/log.45697453._000619.job
[2025-07-24 10:06:24] 2025-07-24 14:05:47,473 | INFO     | adding to output.list: log.45697453._000619.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9f/1e/log.45697453._000619.job.log.tg
[2025-07-24 10:06:24] 2025-07-24 14:05:47,473 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 10:06:24] 2025-07-24 14:05:47,473 | INFO     | summary of transferred files:
[2025-07-24 10:06:24] 2025-07-24 14:05:47,473 | INFO     |  -- lfn=log.45697453._000619.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 10:06:24] 2025-07-24 14:05:47,473 | INFO     | stage-out finished correctly
[2025-07-24 10:06:24] 2025-07-24 14:05:49,270 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 10:06:24] 2025-07-24 14:05:50,258 | INFO     | job 6741708302 has state=finished
[2025-07-24 10:06:24] 2025-07-24 14:05:50,258 | INFO     | preparing for final server update for job 6741708302 in state='finished'
[2025-07-24 10:06:24] 2025-07-24 14:05:50,259 | INFO     | this job has now completed (state=finished)
[2025-07-24 10:06:24] 2025-07-24 14:05:50,259 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 10:06:24] 2025-07-24 14:05:50,259 | INFO     | log transfer has been attempted: DONE
[2025-07-24 10:06:24] 2025-07-24 14:05:50,259 | INFO     | job 6741708302 has finished - writing final server update
[2025-07-24 10:06:24] 2025-07-24 14:05:50,259 | INFO     | total number of processed events: 400 (read)
[2025-07-24 10:06:24] 2025-07-24 14:05:50,259 | INFO     | executing command: lscpu
[2025-07-24 10:06:24] 2025-07-24 14:05:50,283 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 10:06:24] 2025-07-24 14:05:52,226 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 10:06:24] 2025-07-24 14:05:52,228 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2994.348999999997
[2025-07-24 10:06:24] 2025-07-24 14:05:52,235 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6741708302/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 10:06:24] 2025-07-24 14:05:52,235 | INFO     | extracted standard info from prmon json
[2025-07-24 10:06:24] 2025-07-24 14:05:52,235 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 10:06:24] 2025-07-24 14:05:52,235 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 10:06:24] 2025-07-24 14:05:52,236 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 10:06:24] 2025-07-24 14:05:52,236 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | fitting pss+swap vs Time
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | sum of square deviations: 70364110.0
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | sum of deviations: 472634527.00000024
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | mean x: 1753363941.0
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | mean y: 2548831.131147541
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | -- intersect: -11774766861.675758
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | intersect: -11774766861.675758
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | chi2: 0.0003586689219321003
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | -- intersect: -11774766861.675758
[2025-07-24 10:06:24] 2025-07-24 14:05:52,237 | INFO     | current memory leak: 6.72 B/s (using 61 data points, chi2=0.00)
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | could have reported an average CPU frequency of 2994 MHz (6 samples)
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | ..............................
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . Timing measurements:
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . get job = 0 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . initial setup = 2 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . payload setup = 3 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . stage-in = 0 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . payload execution = 4140 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . stage-out = 0 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | . log creation = 0 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,238 | INFO     | ..............................
[2025-07-24 10:06:24] 2025-07-24 14:05:52,292 | INFO     | 
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | job summary report
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | --------------------------------------------------
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | PanDA job id: 6741708302
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | task id: 45697453
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | errors: (none)
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | pilot state: finished 
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | transexitcode: 0
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | exeerrorcode: 0
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | exeerrordiag: 
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | exitcode: 0
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | exitmsg: OK
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | cpuconsumptiontime: 31311 s
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | nevents: 400
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | neventsw: 0
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | pid: 26660
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | pgrp: 26660
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | corecount: 8
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | event service: False
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | sizes: {0: 2397546, 1: 2397546, 3: 2397836, 11: 2397864, 4147: 2423987, 4148: 2433168, 4150: 2433168, 4153: 2433362}
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | --------------------------------------------------
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | 
[2025-07-24 10:06:24] 2025-07-24 14:05:52,293 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,307 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | job 6741708302 has completed (purged errors)
[2025-07-24 10:06:24] 2025-07-24 14:05:52,308 | INFO     | overall cleanup function is called
[2025-07-24 10:06:24] 2025-07-24 14:05:53,315 | INFO     | --- collectZombieJob: --- 10, [26660]
[2025-07-24 10:06:24] 2025-07-24 14:05:53,315 | INFO     | zombie collector waiting for pid 26660
[2025-07-24 10:06:24] 2025-07-24 14:05:53,315 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 10:06:24] 2025-07-24 14:05:53,315 | INFO     | collected zombie processes
[2025-07-24 10:06:24] 2025-07-24 14:05:53,316 | INFO     | will attempt to kill all subprocesses of pid=26660
[2025-07-24 10:06:24] 2025-07-24 14:05:53,442 | WARNING  | process 26660 can no longer be monitored (due to stat problems) - aborting
[2025-07-24 10:06:24] 2025-07-24 14:05:53,547 | INFO     | process IDs to be killed: [26660] (in reverse order)
[2025-07-24 10:06:24] 2025-07-24 14:05:53,583 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 10:06:24] 2025-07-24 14:05:53,594 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 10:06:24] 2025-07-24 14:05:53,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 10:06:24] 2025-07-24 14:05:53,603 | INFO     | did not find any defunct processes belonging to 26660
[2025-07-24 10:06:24] 2025-07-24 14:05:53,607 | INFO     | did not find any defunct processes belonging to 26660
[2025-07-24 10:06:24] 2025-07-24 14:05:53,607 | INFO     | ready for new job
[2025-07-24 10:06:24] 2025-07-24 14:05:53,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 10:06:24] 2025-07-24 14:05:53,608 | INFO     | ***************************************
[2025-07-24 10:06:24] 2025-07-24 14:05:53,608 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 10:06:24] 2025-07-24 14:05:53,608 | INFO     | ***************************************
[2025-07-24 10:06:24] 2025-07-24 14:05:53,608 | INFO     | 
[2025-07-24 10:06:24] 2025-07-24 14:05:53,611 | INFO     | architecture information:
[2025-07-24 10:06:24] 2025-07-24 14:05:53,611 | INFO     | executing command: cat /etc/os-release
[2025-07-24 10:06:24] 2025-07-24 14:05:53,620 | INFO     | cat /etc/os-release:
[2025-07-24 10:06:24] NAME="CentOS Linux"
[2025-07-24 10:06:24] VERSION="7 (Core)"
[2025-07-24 10:06:24] ID="centos"
[2025-07-24 10:06:24] ID_LIKE="rhel fedora"
[2025-07-24 10:06:24] VERSION_ID="7"
[2025-07-24 10:06:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 10:06:24] ANSI_COLOR="0;31"
[2025-07-24 10:06:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 10:06:24] HOME_URL="https://www.centos.org/"
[2025-07-24 10:06:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 10:06:24] 
[2025-07-24 10:06:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 10:06:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 10:06:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 10:06:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 10:06:24] 
[2025-07-24 10:06:24] 2025-07-24 14:05:53,620 | INFO     | ***************************************
[2025-07-24 10:06:24] 2025-07-24 14:05:53,690 | INFO     | number of running child processes to parent process 26660: 1
[2025-07-24 10:06:24] 2025-07-24 14:05:53,690 | INFO     | maximum number of monitored processes: 6
[2025-07-24 10:06:24] 2025-07-24 14:05:53,690 | INFO     | aborting job monitoring since job object (job id=6741708302) has expired
[2025-07-24 10:06:24] 2025-07-24 14:05:54,122 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-07-24 10:06:24] 2025-07-24 14:05:54,134 | INFO     | sufficient remaining disk space (74499227648 B)
[2025-07-24 10:06:24] 2025-07-24 14:05:54,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 10:06:24] 2025-07-24 14:05:54,134 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 10:06:24] 2025-07-24 14:05:54,134 | INFO     | update_server=False
[2025-07-24 10:06:24] 2025-07-24 14:05:54,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 10:06:24] 2025-07-24 14:05:54,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 10:06:24] 2025-07-24 14:05:54,134 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 10:06:24] 2025-07-24 14:05:54,135 | INFO     | will abort loop
[2025-07-24 10:06:24] 2025-07-24 14:05:54,992 | INFO     | all data control threads have been joined
[2025-07-24 10:06:24] 2025-07-24 14:05:55,140 | INFO     | [job] retrieve thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:55,140 | INFO     | [job] queue monitor thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:55,140 | INFO     | [job] job monitor thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:55,231 | INFO     | all payload control threads have been joined
[2025-07-24 10:06:24] 2025-07-24 14:05:55,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 10:06:24] 2025-07-24 14:05:55,444 | INFO     | all job control threads have been joined
[2025-07-24 10:06:24] 2025-07-24 14:05:55,542 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 10:06:24] 2025-07-24 14:05:55,664 | INFO     | [payload] validate_post thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:55,711 | INFO     | [job] validate thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:55,739 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:55,850 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:55,997 | INFO     | [data] control thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:56,236 | INFO     | [payload] control thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:56,449 | INFO     | [job] control thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:56,466 | INFO     | [data] copytool_in thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:56,613 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:56,657 | INFO     | [payload] failed_post thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:57,548 | INFO     | [data] copytool_out thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:05:59,347 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:06:04,196 | INFO     | job.realtimelogging is not enabled
[2025-07-24 10:06:24] 2025-07-24 14:06:05,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 10:06:24] 2025-07-24 14:06:05,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628849071936)>', '<ExcThread(monitor, started 139628405303040)>']
[2025-07-24 10:06:24] 2025-07-24 14:06:10,571 | INFO     | all workflow threads have been joined
[2025-07-24 10:06:24] 2025-07-24 14:06:10,571 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 10:06:24] 2025-07-24 14:06:10,571 | INFO     | traces error code: 0
[2025-07-24 10:06:24] 2025-07-24 14:06:10,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 10:06:24] 2025-07-24 14:06:23,968 | INFO     | PID=14646 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-24 10:06:24] 2025-07-24 14:06:23,969 | INFO     | .. there are 3 such processes running
[2025-07-24 10:06:24] 2025-07-24 14:06:23,969 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 10:06:24] 2025-07-24 14:06:23,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 10:06:24] 2025-07-24 14:06:23,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 10:06:24] 2025-07-24 14:06:23,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 10:06:24] 2025-07-24 14:06:23,969 | INFO     | [monitor] control thread has ended
[2025-07-24 10:06:24] 2025-07-24 14:06:24,071 [wrapper] ==== pilot stdout END ====
[2025-07-24 10:06:24] 2025-07-24 14:06:24,073 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 10:06:24] 2025-07-24 14:06:24,074 [wrapper] pilotpid: 14646
[2025-07-24 10:06:24] 2025-07-24 14:06:24,076 [wrapper] Pilot exit status: 0
[2025-07-24 10:06:24] 2025-07-24 14:06:24,081 [wrapper] pandaids: 6741708302
[2025-07-24 10:06:24] 2025-07-24 14:06:24,113 [wrapper] cleanup supervisor_pilot 26858 14647
[2025-07-24 10:06:24] 2025-07-24 14:06:24,114 [wrapper] Test setup, not cleaning
[2025-07-24 10:06:24] 2025-07-24 14:06:24,116 [wrapper] apfmon messages muted
[2025-07-24 10:06:24] 2025-07-24 14:06:24,117 [wrapper] ==== wrapper stdout END ====
[2025-07-24 10:06:24] 2025-07-24 14:06:24,118 [wrapper] ==== wrapper stderr END ====
[2025-07-24 10:06:24]  *** Error codes and diagnostics ***
[2025-07-24 10:06:24]     "exeErrorCode": 0,
[2025-07-24 10:06:24]     "exeErrorDiag": "",
[2025-07-24 10:06:24]     "pilotErrorCode": 0,
[2025-07-24 10:06:24]     "pilotErrorDiag": "",
[2025-07-24 10:06:24]  *** Listing of results directory ***
[2025-07-24 10:06:24] total 571828
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas    530466 Jul 21 18:09 pilot3.tar.gz
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas      5112 Jul 21 18:20 queuedata.json
[2025-07-24 10:06:24] -rwx------ 1 boincer umatlas     36292 Jul 21 18:21 runpilot2-wrapper.sh
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas       100 Jul 24 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 10:06:24] -rwxr-xr-x 1 boincer umatlas      7986 Jul 24 08:56 run_atlas
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas       105 Jul 24 08:56 job.xml
[2025-07-24 10:06:24] -rw-r--r-- 2 boincer umatlas 320459676 Jul 24 08:56 EVNT.45697451._000025.pool.root.1
[2025-07-24 10:06:24] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 08:56 start_atlas.sh
[2025-07-24 10:06:24] drwxrwx--x 2 boincer umatlas      4096 Jul 24 08:56 shared
[2025-07-24 10:06:24] -rw-r--r-- 2 boincer umatlas    542904 Jul 24 08:56 input.tar.gz
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas         0 Jul 24 08:56 boinc_lockfile
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas      2631 Jul 24 08:56 pandaJob.out
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas    979599 Jul 24 08:56 agis_schedconf.cvmfs.json
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas   1593041 Jul 24 08:56 agis_ddmendpoints.agis.ALL.json
[2025-07-24 10:06:24] drwx------ 4 boincer umatlas      4096 Jul 24 08:56 pilot3
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas      6338 Jul 24 10:01 init_data.xml
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas 259743547 Jul 24 10:05 HITS.45697453._000619.pool.root.1
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas       529 Jul 24 10:05 boinc_task_state.xml
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas      1036 Jul 24 10:05 memory_monitor_summary.json
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas    310925 Jul 24 10:05 log.45697453._000619.job.log.tgz.1
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas      7780 Jul 24 10:05 heartbeat.json
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas      8192 Jul 24 10:06 boinc_mmap_file
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas        27 Jul 24 10:06 wrapper_checkpoint.txt
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas       820 Jul 24 10:06 pilotlog.txt
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas        95 Jul 24 10:06 pilot_heartbeat.json
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas    423039 Jul 24 10:06 log.45697453._000619.job.log.1
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas       357 Jul 24 10:06 output.list
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas       620 Jul 24 10:06 runtime_log
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas    757760 Jul 24 10:06 result.tar.gz
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas      8660 Jul 24 10:06 runtime_log.err
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas       657 Jul 24 10:06 iWgNDml3Dy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmActKDm62iVjm.diag
[2025-07-24 10:06:24] -rw-r--r-- 1 boincer umatlas     21534 Jul 24 10:06 stderr.txt
[2025-07-24 10:06:24] HITS file was successfully produced:
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas 259743547 Jul 24 10:05 shared/HITS.pool.root.1
[2025-07-24 10:06:24]  *** Contents of shared directory: ***
[2025-07-24 10:06:24] total 567904
[2025-07-24 10:06:24] -rw-r--r-- 2 boincer umatlas 320459676 Jul 24 08:56 ATLAS.root_0
[2025-07-24 10:06:24] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 08:56 start_atlas.sh
[2025-07-24 10:06:24] -rw-r--r-- 2 boincer umatlas    542904 Jul 24 08:56 input.tar.gz
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas 259743547 Jul 24 10:05 HITS.pool.root.1
[2025-07-24 10:06:24] -rw------- 1 boincer umatlas    757760 Jul 24 10:06 result.tar.gz
10:06:25 (10772): run_atlas exited; CPU time 30925.496426
10:06:25 (10772): called boinc_finish(0)

</stderr_txt>
]]>

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