Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:37:20 (2031810): wrapper (7.7.26015): starting
08:37:20 (2031810): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 08:37:20] Arguments: --nthreads 8
[2025-07-24 08:37:20] Threads: 8
[2025-07-24 08:37:20] Checking for CVMFS
[2025-07-24 08:37:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 08:37:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 08:37:21] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 08:37:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 08:37:21] 2.12.6.0 2720467 14052 146008 148699 0 572 36741930 40960000 27258 16776704 0 135992963 99.719 128361356 28658 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 08:37:21] CVMFS is ok
[2025-07-24 08:37:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 08:37:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 08:37:21] Further information can be found at the LHC@home message board.
[2025-07-24 08:37:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 08:37:21] Checking for apptainer binary...
[2025-07-24 08:37:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 08:37:21] Running /usr/bin/apptainer --version
[2025-07-24 08:37:21] apptainer version 1.4.1-1.el9
[2025-07-24 08:37:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 08:37:22] c8-16-1.aglt2.org
[2025-07-24 08:37:22] apptainer works
[2025-07-24 08:37:22] Set ATHENA_PROC_NUMBER=8
[2025-07-24 08:37:22] Set ATHENA_CORE_NUMBER=8
[2025-07-24 08:37:22] Starting ATLAS job with PandaID=6741692509
[2025-07-24 08:37:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 10:02:58]  *** The last 200 lines of the pilot log: ***
[2025-07-24 10:02:58]  mtime=0
[2025-07-24 10:02:58]  protocol_id=None
[2025-07-24 10:02:58]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 10:02:58]  replicas=None
[2025-07-24 10:02:58]  scope=mc23_13p6TeV
[2025-07-24 10:02:58]  status=None
[2025-07-24 10:02:58]  status_code=0
[2025-07-24 10:02:58]  storage_token=
[2025-07-24 10:02:58]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6741692509/log.45697532._001418.job.log.tgz.1
[2025-07-24 10:02:58]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/93/log.45697532._001418.job.log.tgz.1
[2025-07-24 10:02:58]  workdir=None
[2025-07-24 10:02:58] ]
[2025-07-24 10:02:58] 2025-07-24 14:02:16,492 | INFO     | transferring file log.45697532._001418.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6741692509/log.45697532._001418.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-24 10:02:58] 2025-07-24 14:02:16,492 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6741692509/log.45697532._001418.job.log.tgz.1 /tmp/boinchome/slots/0/log.45697532._001418.job
[2025-07-24 10:02:58] 2025-07-24 14:02:16,509 | INFO     | adding to output.list: log.45697532._001418.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/93/log.45697532._001418.job.log.tg
[2025-07-24 10:02:58] 2025-07-24 14:02:16,510 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 10:02:58] 2025-07-24 14:02:16,510 | INFO     | summary of transferred files:
[2025-07-24 10:02:58] 2025-07-24 14:02:16,510 | INFO     |  -- lfn=log.45697532._001418.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 10:02:58] 2025-07-24 14:02:16,510 | INFO     | stage-out finished correctly
[2025-07-24 10:02:58] 2025-07-24 14:02:16,652 | INFO     | monitor loop #356: job 0:6741692509 is in state 'finished'
[2025-07-24 10:02:58] 2025-07-24 14:02:16,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 10:02:58] 2025-07-24 14:02:19,155 | INFO     | monitor loop #357: job 0:6741692509 is in state 'finished'
[2025-07-24 10:02:58] 2025-07-24 14:02:19,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 10:02:58] 2025-07-24 14:02:19,525 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 10:02:58] 2025-07-24 14:02:21,658 | INFO     | monitor loop #358: job 0:6741692509 is in state 'finished'
[2025-07-24 10:02:58] 2025-07-24 14:02:21,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 10:02:58] 2025-07-24 14:02:21,684 | INFO     | job 6741692509 has state=finished
[2025-07-24 10:02:58] 2025-07-24 14:02:21,684 | INFO     | preparing for final server update for job 6741692509 in state='finished'
[2025-07-24 10:02:58] 2025-07-24 14:02:21,684 | INFO     | this job has now completed (state=finished)
[2025-07-24 10:02:58] 2025-07-24 14:02:21,685 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 10:02:58] 2025-07-24 14:02:21,685 | INFO     | log transfer has been attempted: DONE
[2025-07-24 10:02:58] 2025-07-24 14:02:21,685 | INFO     | job 6741692509 has finished - writing final server update
[2025-07-24 10:02:58] 2025-07-24 14:02:21,685 | INFO     | total number of processed events: 400 (read)
[2025-07-24 10:02:58] 2025-07-24 14:02:21,686 | INFO     | executing command: lscpu
[2025-07-24 10:02:58] 2025-07-24 14:02:21,751 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 10:02:58] 2025-07-24 14:02:24,161 | INFO     | monitor loop #359: job 0:6741692509 is in state 'finished'
[2025-07-24 10:02:58] 2025-07-24 14:02:24,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 10:02:58] 2025-07-24 14:02:25,778 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-24 10:02:58] 2025-07-24 14:02:25,783 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3753.8252187499997
[2025-07-24 10:02:58] 2025-07-24 14:02:25,796 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741692509/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 10:02:58] 2025-07-24 14:02:25,797 | INFO     | extracted standard info from prmon json
[2025-07-24 10:02:58] 2025-07-24 14:02:25,797 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 10:02:58] 2025-07-24 14:02:25,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 10:02:58] 2025-07-24 14:02:25,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 10:02:58] 2025-07-24 14:02:25,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 10:02:58] 2025-07-24 14:02:25,798 | INFO     | fitting pss+swap vs Time
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | sum of square deviations: 136095575.0
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | sum of deviations: -9699362949.999998
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | mean x: 1753363293.5
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | mean y: 2626914.6842105263
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | -- intersect: 124962655680.23276
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | intersect: 124962655680.23276
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | chi2: 0.14446253104458356
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | -- intersect: 124962655680.23276
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | current memory leak: -71.27 B/s (using 76 data points, chi2=0.14)
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | could have reported an average CPU frequency of 3741 MHz (6 samples)
[2025-07-24 10:02:58] 2025-07-24 14:02:25,799 | INFO     | ..............................
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . Timing measurements:
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . get job = 0 s
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . initial setup = 3 s
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . payload setup = 9 s
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . stage-in = 0 s
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . payload execution = 5035 s
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . stage-out = 0 s
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | . log creation = 0 s
[2025-07-24 10:02:58] 2025-07-24 14:02:25,800 | INFO     | ..............................
[2025-07-24 10:02:58] 2025-07-24 14:02:26,319 | INFO     | 
[2025-07-24 10:02:58] 2025-07-24 14:02:26,319 | INFO     | job summary report
[2025-07-24 10:02:58] 2025-07-24 14:02:26,319 | INFO     | --------------------------------------------------
[2025-07-24 10:02:58] 2025-07-24 14:02:26,319 | INFO     | PanDA job id: 6741692509
[2025-07-24 10:02:58] 2025-07-24 14:02:26,319 | INFO     | task id: 45697532
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | errors: (none)
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | pilot state: finished 
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | transexitcode: 0
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | exeerrorcode: 0
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | exeerrordiag: 
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | exitcode: 0
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | exitmsg: OK
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | cpuconsumptiontime: 35625 s
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | nevents: 400
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | neventsw: 0
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | pid: 2048931
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | pgrp: 2048931
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | corecount: 8
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | event service: False
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | sizes: {0: 2397481, 8: 2397743, 11: 2397771, 5049: 2424106, 5051: 2433104, 5054: 2433160, 5060: 2433482}
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | --------------------------------------------------
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | 
[2025-07-24 10:02:58] 2025-07-24 14:02:26,320 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 10:02:58] 2025-07-24 14:02:26,338 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,338 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,338 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,338 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,338 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | job 6741692509 has completed (purged errors)
[2025-07-24 10:02:58] 2025-07-24 14:02:26,339 | INFO     | overall cleanup function is called
[2025-07-24 10:02:58] 2025-07-24 14:02:27,348 | INFO     | --- collectZombieJob: --- 10, [2048931]
[2025-07-24 10:02:58] 2025-07-24 14:02:27,348 | INFO     | zombie collector waiting for pid 2048931
[2025-07-24 10:02:58] 2025-07-24 14:02:27,348 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 10:02:58] 2025-07-24 14:02:27,348 | INFO     | collected zombie processes
[2025-07-24 10:02:58] 2025-07-24 14:02:27,348 | INFO     | will attempt to kill all subprocesses of pid=2048931
[2025-07-24 10:02:58] 2025-07-24 14:02:27,764 | INFO     | process IDs to be killed: [2048931] (in reverse order)
[2025-07-24 10:02:58] 2025-07-24 14:02:27,924 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 10:02:58] 2025-07-24 14:02:27,925 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 10:02:58] 2025-07-24 14:02:27,951 | INFO     | did not find any defunct processes belonging to 2048931
[2025-07-24 10:02:58] 2025-07-24 14:02:27,976 | INFO     | did not find any defunct processes belonging to 2048931
[2025-07-24 10:02:58] 2025-07-24 14:02:27,976 | INFO     | ready for new job
[2025-07-24 10:02:58] 2025-07-24 14:02:27,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 10:02:58] 2025-07-24 14:02:27,977 | INFO     | ***************************************
[2025-07-24 10:02:58] 2025-07-24 14:02:27,977 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 10:02:58] 2025-07-24 14:02:27,977 | INFO     | ***************************************
[2025-07-24 10:02:58] 2025-07-24 14:02:27,977 | INFO     | 
[2025-07-24 10:02:58] 2025-07-24 14:02:27,995 | INFO     | architecture information:
[2025-07-24 10:02:58] 2025-07-24 14:02:27,995 | INFO     | executing command: cat /etc/os-release
[2025-07-24 10:02:58] 2025-07-24 14:02:28,011 | INFO     | cat /etc/os-release:
[2025-07-24 10:02:58] NAME="CentOS Linux"
[2025-07-24 10:02:58] VERSION="7 (Core)"
[2025-07-24 10:02:58] ID="centos"
[2025-07-24 10:02:58] ID_LIKE="rhel fedora"
[2025-07-24 10:02:58] VERSION_ID="7"
[2025-07-24 10:02:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 10:02:58] ANSI_COLOR="0;31"
[2025-07-24 10:02:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 10:02:58] HOME_URL="https://www.centos.org/"
[2025-07-24 10:02:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 10:02:58] 
[2025-07-24 10:02:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 10:02:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 10:02:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 10:02:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 10:02:58] 
[2025-07-24 10:02:58] 2025-07-24 14:02:28,011 | INFO     | ***************************************
[2025-07-24 10:02:58] 2025-07-24 14:02:28,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 10:02:58] 2025-07-24 14:02:28,532 | INFO     | sufficient remaining disk space (173406158848 B)
[2025-07-24 10:02:58] 2025-07-24 14:02:28,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 10:02:58] 2025-07-24 14:02:28,532 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 10:02:58] 2025-07-24 14:02:28,532 | INFO     | update_server=False
[2025-07-24 10:02:58] 2025-07-24 14:02:28,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 10:02:58] 2025-07-24 14:02:28,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 10:02:58] 2025-07-24 14:02:28,533 | INFO     | aborting loop
[2025-07-24 10:02:58] 2025-07-24 14:02:28,911 | INFO     | all data control threads have been joined
[2025-07-24 10:02:58] 2025-07-24 14:02:29,538 | INFO     | [job] retrieve thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:29,539 | INFO     | [job] job monitor thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:29,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 10:02:58] 2025-07-24 14:02:29,812 | INFO     | all payload control threads have been joined
[2025-07-24 10:02:58] 2025-07-24 14:02:29,836 | INFO     | [job] validate thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:29,916 | INFO     | [data] control thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:29,940 | INFO     | [data] copytool_in thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:30,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 10:02:58] 2025-07-24 14:02:30,113 | INFO     | all job control threads have been joined
[2025-07-24 10:02:58] 2025-07-24 14:02:30,173 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:30,180 | INFO     | [payload] validate_post thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:30,241 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:30,277 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:30,509 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:30,818 | INFO     | [payload] control thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:30,867 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 10:02:58] 2025-07-24 14:02:31,118 | INFO     | [job] control thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:31,130 | INFO     | [payload] failed_post thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:31,590 | INFO     | [data] copytool_out thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:31,872 | INFO     | [job] queue monitor thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:34,097 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 10:02:58] 2025-07-24 14:02:36,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139941980383040)>', '<ExcThread(monitor, started 139941501724416)>']
[2025-07-24 10:02:58] 2025-07-24 14:02:41,215 | INFO     | all workflow threads have been joined
[2025-07-24 10:02:58] 2025-07-24 14:02:41,215 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 10:02:58] 2025-07-24 14:02:41,215 | INFO     | traces error code: 0
[2025-07-24 10:02:58] 2025-07-24 14:02:41,215 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 10:02:58] 2025-07-24 14:02:58,392 | INFO     | PID=2038164 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 10:02:58] 2025-07-24 14:02:58,395 | INFO     | .. there are 29 such processes running
[2025-07-24 10:02:58] 2025-07-24 14:02:58,395 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 10:02:58] 2025-07-24 14:02:58,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 10:02:58] 2025-07-24 14:02:58,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 10:02:58] 2025-07-24 14:02:58,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 10:02:58] 2025-07-24 14:02:58,395 | INFO     | [monitor] control thread has ended
[2025-07-24 10:02:58] 2025-07-24 14:02:58,620 [wrapper] ==== pilot stdout END ====
[2025-07-24 10:02:58] 2025-07-24 14:02:58,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 10:02:58] 2025-07-24 14:02:58,626 [wrapper] pilotpid: 2038164
[2025-07-24 10:02:58] 2025-07-24 14:02:58,628 [wrapper] Pilot exit status: 0
[2025-07-24 10:02:58] 2025-07-24 14:02:58,642 [wrapper] pandaids: 6741692509
[2025-07-24 10:02:58] 2025-07-24 14:02:58,763 [wrapper] cleanup supervisor_pilot 2906040 2038165
[2025-07-24 10:02:58] 2025-07-24 14:02:58,767 [wrapper] Test setup, not cleaning
[2025-07-24 10:02:58] 2025-07-24 14:02:58,769 [wrapper] apfmon messages muted
[2025-07-24 10:02:58] 2025-07-24 14:02:58,773 [wrapper] ==== wrapper stdout END ====
[2025-07-24 10:02:58] 2025-07-24 14:02:58,776 [wrapper] ==== wrapper stderr END ====
[2025-07-24 10:02:58]  *** Error codes and diagnostics ***
[2025-07-24 10:02:58]     "exeErrorCode": 0,
[2025-07-24 10:02:58]     "exeErrorDiag": "",
[2025-07-24 10:02:58]     "pilotErrorCode": 0,
[2025-07-24 10:02:58]     "pilotErrorDiag": "",
[2025-07-24 10:02:58]  *** Listing of results directory ***
[2025-07-24 10:02:58] total 616188
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas    530466 Jul 21 17:11 pilot3.tar.gz
[2025-07-24 10:02:58] -rwx------. 1 boincer umatlas     36292 Jul 21 17:24 runpilot2-wrapper.sh
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas      5112 Jul 21 17:24 queuedata.json
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas       100 Jul 24 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 10:02:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 08:37 run_atlas
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas       105 Jul 24 08:37 job.xml
[2025-07-24 10:02:58] -rw-r--r--. 2 boincer umatlas 330041537 Jul 24 08:37 EVNT.45697530._000057.pool.root.1
[2025-07-24 10:02:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 08:37 start_atlas.sh
[2025-07-24 10:02:58] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 08:37 shared
[2025-07-24 10:02:58] -rw-r--r--. 2 boincer umatlas    542892 Jul 24 08:37 input.tar.gz
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas         0 Jul 24 08:37 boinc_lockfile
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas      2610 Jul 24 08:37 pandaJob.out
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas    979599 Jul 24 08:37 agis_schedconf.cvmfs.json
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas   1593041 Jul 24 08:37 agis_ddmendpoints.agis.ALL.json
[2025-07-24 10:02:58] drwx------. 4 boincer umatlas      4096 Jul 24 08:37 pilot3
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas      7162 Jul 24 09:56 init_data.xml
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas 295459620 Jul 24 10:01 HITS.45697532._001418.pool.root.1
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas       529 Jul 24 10:01 boinc_task_state.xml
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas        95 Jul 24 10:02 pilot_heartbeat.json
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas      1046 Jul 24 10:02 memory_monitor_summary.json
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas    316609 Jul 24 10:02 log.45697532._001418.job.log.tgz.1
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas      7784 Jul 24 10:02 heartbeat.json
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 10:02 boinc_mmap_file
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas        27 Jul 24 10:02 wrapper_checkpoint.txt
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas       823 Jul 24 10:02 pilotlog.txt
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas    487401 Jul 24 10:02 log.45697532._001418.job.log.1
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas       357 Jul 24 10:02 output.list
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas       620 Jul 24 10:02 runtime_log
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas    819200 Jul 24 10:02 result.tar.gz
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas      8655 Jul 24 10:02 runtime_log.err
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas       656 Jul 24 10:02 r3MNDmgADy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJmGLDmSXiEOm.diag
[2025-07-24 10:02:58] -rw-r--r--. 1 boincer umatlas     21766 Jul 24 10:02 stderr.txt
[2025-07-24 10:02:58] HITS file was successfully produced:
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas 295459620 Jul 24 10:01 shared/HITS.pool.root.1
[2025-07-24 10:02:58]  *** Contents of shared directory: ***
[2025-07-24 10:02:58] total 612196
[2025-07-24 10:02:58] -rw-r--r--. 2 boincer umatlas 330041537 Jul 24 08:37 ATLAS.root_0
[2025-07-24 10:02:58] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 08:37 start_atlas.sh
[2025-07-24 10:02:58] -rw-r--r--. 2 boincer umatlas    542892 Jul 24 08:37 input.tar.gz
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas 295459620 Jul 24 10:01 HITS.pool.root.1
[2025-07-24 10:02:58] -rw-------. 1 boincer umatlas    819200 Jul 24 10:02 result.tar.gz
10:03:00 (2031810): run_atlas exited; CPU time 35725.026885
10:03:00 (2031810): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN