Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
18:47:12 (2041326): wrapper (7.7.26015): starting
18:47:12 (2041326): wrapper: running run_atlas (--nthreads 3)
[2025-07-24 18:47:12] Arguments: --nthreads 3
[2025-07-24 18:47:12] Threads: 3
[2025-07-24 18:47:12] Checking for CVMFS
[2025-07-24 18:47:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 18:47:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 18:47:12] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 18:47:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 18:47:12] 2.9.2.0 1130292 3959 80328 148708 3 57 31640815 36864000 0 130560 0 2373639 99.987 154644 2472 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-07-24 18:47:12] CVMFS is ok
[2025-07-24 18:47:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 18:47:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 18:47:12] Further information can be found at the LHC@home message board.
[2025-07-24 18:47:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 18:47:12] Checking for apptainer binary...
[2025-07-24 18:47:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 18:47:12] Running /usr/bin/apptainer --version
[2025-07-24 18:47:12] apptainer version 1.3.6-6.1
[2025-07-24 18:47:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 18:47:12] atlasA215c
[2025-07-24 18:47:12] apptainer works
[2025-07-24 18:47:12] Set ATHENA_PROC_NUMBER=3
[2025-07-24 18:47:12] Set ATHENA_CORE_NUMBER=3
[2025-07-24 18:47:12] Starting ATLAS job with PandaID=6741693075
[2025-07-24 18:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 21:04:11]  *** The last 200 lines of the pilot log: ***
[2025-07-24 21:04:11] 2025-07-24 19:03:38,592 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6741693075/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,593 | INFO     | extracted standard info from prmon json
[2025-07-24 21:04:11] 2025-07-24 19:03:38,593 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 21:04:11] 2025-07-24 19:03:38,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 21:04:11] 2025-07-24 19:03:38,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 21:04:11] 2025-07-24 19:03:38,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 21:04:11] 2025-07-24 19:03:38,594 | INFO     | fitting pss+swap vs Time
[2025-07-24 21:04:11] 2025-07-24 19:03:38,594 | INFO     | sum of square deviations: 746051197.5
[2025-07-24 21:04:11] 2025-07-24 19:03:38,594 | INFO     | sum of deviations: -5396190814.500001
[2025-07-24 21:04:11] 2025-07-24 19:03:38,594 | INFO     | mean x: 1753379714.5
[2025-07-24 21:04:11] 2025-07-24 19:03:38,594 | INFO     | mean y: 2409907.8731343285
[2025-07-24 21:04:11] 2025-07-24 19:03:38,594 | INFO     | -- intersect: 12684611265.395296
[2025-07-24 21:04:11] 2025-07-24 19:03:38,594 | INFO     | intersect: 12684611265.395296
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | chi2: 1.6024023875596245
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | sum of square deviations: 665612480.0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | sum of deviations: -4892717219.000001
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | mean x: 1753379562.0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | mean y: 2410863.2945736432
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | -- intersect: 12890976856.58857
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | intersect: 12890976856.58857
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | chi2: 1.6019970095559732
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | current chi2=1.6019970095559732 (change=0.02529814026729125 %)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | right removable region: 128
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | sum of square deviations: 665612480.0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | sum of deviations: -21528371686.000008
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | mean x: 1753379867.0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | mean y: 2439743.6356589147
[2025-07-24 21:04:11] 2025-07-24 19:03:38,595 | INFO     | -- intersect: 56713235616.22095
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | intersect: 56713235616.22095
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | chi2: 0.15302172515639065
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | current chi2=0.15302172515639065 (change=90.45048070669473 %)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | sum of square deviations: 591173875.0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | sum of deviations: -15486424410.0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | mean x: 1753380019.5
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | mean y: 2427353.693548387
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | -- intersect: 45934069941.91022
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | intersect: 45934069941.91022
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | chi2: 0.12294934156566772
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | current chi2=0.12294934156566772 (change=19.652362146609224 %)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | left removable region: 20
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | sum of square deviations: 390582207.0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | sum of deviations: -4770507683.999999
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | mean x: 1753380141.5
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | mean y: 2404719.3703703703
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | -- intersect: 21417905190.437027
[2025-07-24 21:04:11] 2025-07-24 19:03:38,596 | INFO     | intersect: 21417905190.437027
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | chi2: 0.04394292095089975
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | -- intersect: 21417905190.437027
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | current memory leak: -12.21 B/s (using 108 data points, chi2=0.04)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | could have reported an average CPU frequency of 3771 MHz (8 samples)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | ..............................
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . Timing measurements:
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . get job = 0 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . initial setup = 1 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . payload setup = 3 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . stage-in = 0 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . payload execution = 8156 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . stage-out = 0 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | . log creation = 0 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,597 | INFO     | ..............................
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | 
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | job summary report
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | --------------------------------------------------
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | PanDA job id: 6741693075
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | task id: 45697541
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | errors: (none)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | pilot state: finished 
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | transexitcode: 0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | exeerrorcode: 0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | exeerrordiag: 
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | exitcode: 0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | exitmsg: OK
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | cpuconsumptiontime: 23763 s
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | nevents: 400
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | neventsw: 0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | pid: 2051460
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | pgrp: 2051460
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | corecount: 3
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | event service: False
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | sizes: {0: 2397514, 3: 2397776, 11: 2397804, 8161: 2425771, 8162: 2434831, 8167: 2434969}
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | --------------------------------------------------
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | 
[2025-07-24 21:04:11] 2025-07-24 19:03:38,629 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-07-24 21:04:11] 2025-07-24 19:03:38,642 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,642 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,642 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,642 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | job 6741693075 has completed (purged errors)
[2025-07-24 21:04:11] 2025-07-24 19:03:38,643 | INFO     | overall cleanup function is called
[2025-07-24 21:04:11] 2025-07-24 19:03:38,867 | INFO     | PID=2044966 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 21:04:11] 2025-07-24 19:03:39,649 | INFO     | --- collectZombieJob: --- 10, [2051460]
[2025-07-24 21:04:11] 2025-07-24 19:03:39,650 | INFO     | zombie collector waiting for pid 2051460
[2025-07-24 21:04:11] 2025-07-24 19:03:39,650 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 21:04:11] 2025-07-24 19:03:39,650 | INFO     | collected zombie processes
[2025-07-24 21:04:11] 2025-07-24 19:03:39,650 | INFO     | will attempt to kill all subprocesses of pid=2051460
[2025-07-24 21:04:11] 2025-07-24 19:03:39,692 | INFO     | process IDs to be killed: [2051460] (in reverse order)
[2025-07-24 21:04:11] 2025-07-24 19:03:39,715 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 21:04:11] 2025-07-24 19:03:39,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 21:04:11] 2025-07-24 19:03:39,717 | INFO     | did not find any defunct processes belonging to 2051460
[2025-07-24 21:04:11] 2025-07-24 19:03:39,718 | INFO     | did not find any defunct processes belonging to 2051460
[2025-07-24 21:04:11] 2025-07-24 19:03:39,718 | INFO     | ready for new job
[2025-07-24 21:04:11] 2025-07-24 19:03:39,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 21:04:11] 2025-07-24 19:03:39,718 | INFO     | ***************************************
[2025-07-24 21:04:11] 2025-07-24 19:03:39,718 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 21:04:11] 2025-07-24 19:03:39,718 | INFO     | ***************************************
[2025-07-24 21:04:11] 2025-07-24 19:03:39,719 | INFO     | 
[2025-07-24 21:04:11] 2025-07-24 19:03:39,719 | INFO     | architecture information:
[2025-07-24 21:04:11] 2025-07-24 19:03:39,719 | INFO     | executing command: cat /etc/os-release
[2025-07-24 21:04:11] 2025-07-24 19:03:39,728 | INFO     | cat /etc/os-release:
[2025-07-24 21:04:11] NAME="CentOS Linux"
[2025-07-24 21:04:11] VERSION="7 (Core)"
[2025-07-24 21:04:11] ID="centos"
[2025-07-24 21:04:11] ID_LIKE="rhel fedora"
[2025-07-24 21:04:11] VERSION_ID="7"
[2025-07-24 21:04:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 21:04:11] ANSI_COLOR="0;31"
[2025-07-24 21:04:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 21:04:11] HOME_URL="https://www.centos.org/"
[2025-07-24 21:04:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 21:04:11] 
[2025-07-24 21:04:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 21:04:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 21:04:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 21:04:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 21:04:11] 
[2025-07-24 21:04:11] 2025-07-24 19:03:39,728 | INFO     | ***************************************
[2025-07-24 21:04:11] 2025-07-24 19:03:39,820 | WARNING  | process 2051460 can no longer be monitored (due to stat problems) - aborting
[2025-07-24 21:04:11] 2025-07-24 19:03:39,849 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 21:04:11] 2025-07-24 19:03:39,887 | INFO     | number of running child processes to parent process 2051460: 1
[2025-07-24 21:04:11] 2025-07-24 19:03:39,887 | INFO     | maximum number of monitored processes: 6
[2025-07-24 21:04:11] 2025-07-24 19:03:39,887 | INFO     | aborting job monitoring since job object (job id=6741693075) has expired
[2025-07-24 21:04:11] 2025-07-24 19:03:40,231 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | INFO     | sufficient remaining disk space (328529346560 B)
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | INFO     | update_server=False
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:04:11] 2025-07-24 19:03:40,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:04:11] 2025-07-24 19:03:40,245 | INFO     | will abort loop
[2025-07-24 21:04:11] 2025-07-24 19:03:40,846 | INFO     | job.realtimelogging is not enabled
[2025-07-24 21:04:11] 2025-07-24 19:03:41,068 | INFO     | all payload control threads have been joined
[2025-07-24 21:04:11] 2025-07-24 19:03:41,109 | INFO     | all data control threads have been joined
[2025-07-24 21:04:11] 2025-07-24 19:03:41,250 | INFO     | [job] retrieve thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:41,250 | INFO     | [job] queue monitor thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:41,250 | INFO     | [job] job monitor thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:41,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 21:04:11] 2025-07-24 19:03:41,622 | INFO     | all job control threads have been joined
[2025-07-24 21:04:11] 2025-07-24 19:03:41,713 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:41,813 | INFO     | [data] copytool_in thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:41,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,073 | INFO     | [payload] control thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,115 | INFO     | [data] control thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,350 | INFO     | [payload] validate_post thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,367 | INFO     | [job] validate thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,377 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,400 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,569 | INFO     | [payload] failed_post thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:42,628 | INFO     | [job] control thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:43,352 | INFO     | [data] copytool_out thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:44,251 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 21:04:11] 2025-07-24 19:03:45,846 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139720853010240)>', '<ExcThread(monitor, started 139720352839424)>']
[2025-07-24 21:04:11] 2025-07-24 19:03:50,871 | INFO     | all workflow threads have been joined
[2025-07-24 21:04:11] 2025-07-24 19:03:50,872 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 21:04:11] 2025-07-24 19:03:50,872 | INFO     | traces error code: 0
[2025-07-24 21:04:11] 2025-07-24 19:03:50,872 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 21:04:11] 2025-07-24 19:04:10,968 | INFO     | PID=2044966 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 21:04:11] 2025-07-24 19:04:10,969 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 21:04:11] 2025-07-24 19:04:10,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 21:04:11] 2025-07-24 19:04:10,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 21:04:11] 2025-07-24 19:04:10,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 21:04:11] 2025-07-24 19:04:10,969 | INFO     | [monitor] control thread has ended
[2025-07-24 21:04:11] 2025-07-24 19:04:11,016 [wrapper] ==== pilot stdout END ====
[2025-07-24 21:04:11] 2025-07-24 19:04:11,018 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 21:04:11] 2025-07-24 19:04:11,021 [wrapper] pilotpid: 2044966
[2025-07-24 21:04:11] 2025-07-24 19:04:11,023 [wrapper] Pilot exit status: 0
[2025-07-24 21:04:11] 2025-07-24 19:04:11,030 [wrapper] pandaids: 6741693075
[2025-07-24 21:04:11] 2025-07-24 19:04:11,046 [wrapper] cleanup supervisor_pilot 2068755 2044967
[2025-07-24 21:04:11] 2025-07-24 19:04:11,048 [wrapper] Test setup, not cleaning
[2025-07-24 21:04:11] 2025-07-24 19:04:11,050 [wrapper] apfmon messages muted
[2025-07-24 21:04:11] 2025-07-24 19:04:11,053 [wrapper] ==== wrapper stdout END ====
[2025-07-24 21:04:11] 2025-07-24 19:04:11,055 [wrapper] ==== wrapper stderr END ====
[2025-07-24 21:04:11]  *** Error codes and diagnostics ***
[2025-07-24 21:04:11]     "exeErrorCode": 0,
[2025-07-24 21:04:11]     "exeErrorDiag": "",
[2025-07-24 21:04:11]     "pilotErrorCode": 0,
[2025-07-24 21:04:11]     "pilotErrorDiag": "",
[2025-07-24 21:04:11]  *** Listing of results directory ***
[2025-07-24 21:04:11] total 641896
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc    530466 Jul 21 23:26 pilot3.tar.gz
[2025-07-24 21:04:11] -rwx------ 1 boinc boinc     36292 Jul 21 23:43 runpilot2-wrapper.sh
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc      5112 Jul 21 23:43 queuedata.json
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc       100 Jul 24 18:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 21:04:11] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 18:47 run_atlas
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc       105 Jul 24 18:47 job.xml
[2025-07-24 21:04:11] -rw-r--r-- 2 boinc boinc 344494527 Jul 24 18:47 EVNT.45697539._000019.pool.root.1
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc      6925 Jul 24 18:47 init_data.xml
[2025-07-24 21:04:11] drwxrwx--x 2 boinc boinc      4096 Jul 24 18:47 shared
[2025-07-24 21:04:11] -rw-r--r-- 2 boinc boinc    542894 Jul 24 18:47 input.tar.gz
[2025-07-24 21:04:11] -rw-r--r-- 2 boinc boinc     15095 Jul 24 18:47 start_atlas.sh
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc         0 Jul 24 18:47 boinc_lockfile
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc      2589 Jul 24 18:47 pandaJob.out
[2025-07-24 21:04:11] -rw------- 1 boinc boinc    979669 Jul 24 18:47 agis_schedconf.cvmfs.json
[2025-07-24 21:04:11] -rw------- 1 boinc boinc   1593052 Jul 24 18:47 agis_ddmendpoints.agis.ALL.json
[2025-07-24 21:04:11] drwx------ 4 boinc boinc      4096 Jul 24 18:47 pilot3
[2025-07-24 21:04:11] -rw------- 1 boinc boinc 306859700 Jul 24 21:03 HITS.45697541._000467.pool.root.1
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc       530 Jul 24 21:03 boinc_task_state.xml
[2025-07-24 21:04:11] -rw------- 1 boinc boinc      1020 Jul 24 21:03 memory_monitor_summary.json
[2025-07-24 21:04:11] -rw------- 1 boinc boinc    265463 Jul 24 21:03 log.45697541._000467.job.log.tgz.1
[2025-07-24 21:04:11] -rw------- 1 boinc boinc      7762 Jul 24 21:03 heartbeat.json
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc      8192 Jul 24 21:03 boinc_mmap_file
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc        27 Jul 24 21:03 wrapper_checkpoint.txt
[2025-07-24 21:04:11] -rw------- 1 boinc boinc       747 Jul 24 21:04 pilotlog.txt
[2025-07-24 21:04:11] -rw------- 1 boinc boinc        95 Jul 24 21:04 pilot_heartbeat.json
[2025-07-24 21:04:11] -rw------- 1 boinc boinc    768133 Jul 24 21:04 log.45697541._000467.job.log.1
[2025-07-24 21:04:11] -rw------- 1 boinc boinc       357 Jul 24 21:04 output.list
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc       620 Jul 24 21:04 runtime_log
[2025-07-24 21:04:11] -rw------- 1 boinc boinc   1054720 Jul 24 21:04 result.tar.gz
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc      8754 Jul 24 21:04 runtime_log.err
[2025-07-24 21:04:11] -rw------- 1 boinc boinc       663 Jul 24 21:04 aYLLDmpTDy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmYWtKDmJ8Oj5n.diag
[2025-07-24 21:04:11] -rw-r--r-- 1 boinc boinc     21247 Jul 24 21:04 stderr.txt
[2025-07-24 21:04:11] HITS file was successfully produced:
[2025-07-24 21:04:11] -rw------- 1 boinc boinc 306859700 Jul 24 21:03 shared/HITS.pool.root.1
[2025-07-24 21:04:11]  *** Contents of shared directory: ***
[2025-07-24 21:04:11] total 637680
[2025-07-24 21:04:11] -rw-r--r-- 2 boinc boinc 344494527 Jul 24 18:47 ATLAS.root_0
[2025-07-24 21:04:11] -rw-r--r-- 2 boinc boinc    542894 Jul 24 18:47 input.tar.gz
[2025-07-24 21:04:11] -rw-r--r-- 2 boinc boinc     15095 Jul 24 18:47 start_atlas.sh
[2025-07-24 21:04:11] -rw------- 1 boinc boinc 306859700 Jul 24 21:03 HITS.pool.root.1
[2025-07-24 21:04:11] -rw------- 1 boinc boinc   1054720 Jul 24 21:04 result.tar.gz
21:04:12 (2041326): run_atlas exited; CPU time 23790.755756
21:04:12 (2041326): called boinc_finish(0)

</stderr_txt>
]]>

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