Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:23:14 (19843): wrapper (7.7.26015): starting
05:23:14 (19843): wrapper: running run_atlas (--nthreads 8)
[2025-07-25 05:23:14] Arguments: --nthreads 8
[2025-07-25 05:23:14] Threads: 8
[2025-07-25 05:23:14] Checking for CVMFS
[2025-07-25 05:23:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 05:23:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 05:23:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 05:23:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 05:23:16] 2.11.2.0 32728 106091 109940 148725 3 109 22933588 25165824 4353 130560 0 80524809 99.888 45408411 3389 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-25 05:23:16] CVMFS is ok
[2025-07-25 05:23:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 05:23:16] Checking for apptainer binary...
[2025-07-25 05:23:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-25 05:23:16] Running /usr/bin/apptainer --version
[2025-07-25 05:23:16] apptainer version 1.3.2-1.el7
[2025-07-25 05:23:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 05:23:17] cg-vwn337.simple-grid.lan
[2025-07-25 05:23:17] apptainer works
[2025-07-25 05:23:17] Set ATHENA_PROC_NUMBER=8
[2025-07-25 05:23:17] Set ATHENA_CORE_NUMBER=8
[2025-07-25 05:23:18] Starting ATLAS job with PandaID=6741673718
[2025-07-25 05:23:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 12:30:38]  *** The last 200 lines of the pilot log: ***
[2025-07-25 12:30:38] 2025-07-25 08:59:16,485 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 12:30:38] 2025-07-25 08:59:16,485 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 12:30:38] 2025-07-25 08:59:16,492 | INFO     | fitting pss+swap vs Time
[2025-07-25 12:30:38] 2025-07-25 08:59:16,492 | INFO     | sum of square deviations: 10941980042.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,504 | INFO     | sum of deviations: -21709585941.500015
[2025-07-25 12:30:38] 2025-07-25 08:59:16,504 | INFO     | mean x: 1753423844.5
[2025-07-25 12:30:38] 2025-07-25 08:59:16,504 | INFO     | mean y: 2556212.1798780486
[2025-07-25 12:30:38] 2025-07-25 08:59:16,505 | INFO     | -- intersect: 3481460898.3458295
[2025-07-25 12:30:38] 2025-07-25 08:59:16,505 | INFO     | intersect: 3481460898.3458295
[2025-07-25 12:30:38] 2025-07-25 08:59:16,505 | INFO     | chi2: 2.589715545189076
[2025-07-25 12:30:38] 2025-07-25 08:59:16,506 | INFO     | sum of square deviations: 10449170802.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,509 | INFO     | sum of deviations: 675273293.9999974
[2025-07-25 12:30:38] 2025-07-25 08:59:16,509 | INFO     | mean x: 1753423692.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,509 | INFO     | mean y: 2563053.9690402476
[2025-07-25 12:30:38] 2025-07-25 08:59:16,509 | INFO     | -- intersect: -110751218.97287092
[2025-07-25 12:30:38] 2025-07-25 08:59:16,509 | INFO     | intersect: -110751218.97287092
[2025-07-25 12:30:38] 2025-07-25 08:59:16,510 | INFO     | chi2: 1.8193421433464558
[2025-07-25 12:30:38] 2025-07-25 08:59:16,510 | INFO     | current chi2=1.8193421433464558 (change=29.747413891604644 %)
[2025-07-25 12:30:38] 2025-07-25 08:59:16,511 | INFO     | sum of square deviations: 9971385099.5
[2025-07-25 12:30:38] 2025-07-25 08:59:16,514 | INFO     | sum of deviations: 416323505.4999802
[2025-07-25 12:30:38] 2025-07-25 08:59:16,514 | INFO     | mean x: 1753423539.5
[2025-07-25 12:30:38] 2025-07-25 08:59:16,514 | INFO     | mean y: 2562971.317610063
[2025-07-25 12:30:38] 2025-07-25 08:59:16,514 | INFO     | -- intersect: -70645657.9055685
[2025-07-25 12:30:38] 2025-07-25 08:59:16,514 | INFO     | intersect: -70645657.9055685
[2025-07-25 12:30:38] 2025-07-25 08:59:16,515 | INFO     | chi2: 1.8191242796758602
[2025-07-25 12:30:38] 2025-07-25 08:59:16,515 | INFO     | current chi2=1.8191242796758602 (change=0.011974859780628509 %)
[2025-07-25 12:30:38] 2025-07-25 08:59:16,515 | INFO     | right removable region: 317
[2025-07-25 12:30:38] 2025-07-25 08:59:16,516 | INFO     | sum of square deviations: 10449170802.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,519 | INFO     | sum of deviations: -78711109843.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,519 | INFO     | mean x: 1753423997.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,519 | INFO     | mean y: 2573748.26625387
[2025-07-25 12:30:38] 2025-07-25 08:59:16,519 | INFO     | -- intersect: 13210698243.925074
[2025-07-25 12:30:38] 2025-07-25 08:59:16,520 | INFO     | intersect: 13210698243.925074
[2025-07-25 12:30:38] 2025-07-25 08:59:16,520 | INFO     | chi2: 1.0301964389504574
[2025-07-25 12:30:38] 2025-07-25 08:59:16,520 | INFO     | current chi2=1.0301964389504574 (change=60.21970672168003 %)
[2025-07-25 12:30:38] 2025-07-25 08:59:16,521 | INFO     | sum of square deviations: 9971385099.5
[2025-07-25 12:30:38] 2025-07-25 08:59:16,540 | INFO     | sum of deviations: -77210913540.99998
[2025-07-25 12:30:38] 2025-07-25 08:59:16,540 | INFO     | mean x: 1753424149.5
[2025-07-25 12:30:38] 2025-07-25 08:59:16,540 | INFO     | mean y: 2573250.742138365
[2025-07-25 12:30:38] 2025-07-25 08:59:16,541 | INFO     | -- intersect: 13579772311.536062
[2025-07-25 12:30:38] 2025-07-25 08:59:16,541 | INFO     | intersect: 13579772311.536062
[2025-07-25 12:30:38] 2025-07-25 08:59:16,541 | INFO     | chi2: 1.0128537340418402
[2025-07-25 12:30:38] 2025-07-25 08:59:16,541 | INFO     | current chi2=1.0128537340418402 (change=1.6834366974016732 %)
[2025-07-25 12:30:38] 2025-07-25 08:59:16,541 | INFO     | left removable region: 20
[2025-07-25 12:30:38] 2025-07-25 08:59:16,542 | INFO     | sum of square deviations: 8123493708.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,545 | INFO     | sum of deviations: -35158492225.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,545 | INFO     | mean x: 1753424119.0
[2025-07-25 12:30:38] 2025-07-25 08:59:16,545 | INFO     | mean y: 2574047.797979798
[2025-07-25 12:30:38] 2025-07-25 08:59:16,545 | INFO     | -- intersect: 7591396107.729951
[2025-07-25 12:30:38] 2025-07-25 08:59:16,545 | INFO     | intersect: 7591396107.729951
[2025-07-25 12:30:38] 2025-07-25 08:59:16,546 | INFO     | chi2: 0.1902369031529607
[2025-07-25 12:30:38] 2025-07-25 08:59:16,546 | INFO     | -- intersect: 7591396107.729951
[2025-07-25 12:30:38] 2025-07-25 08:59:16,546 | INFO     | current memory leak: -4.33 B/s (using 297 data points, chi2=0.19)
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | ..............................
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | . Timing measurements:
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | . get job = 0 s
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | . initial setup = 2 s
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | . payload setup = 11 s
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | . stage-in = 0 s
[2025-07-25 12:30:38] 2025-07-25 08:59:16,547 | INFO     | . payload execution = 19997 s
[2025-07-25 12:30:38] 2025-07-25 08:59:16,548 | INFO     | . stage-out = 5 s
[2025-07-25 12:30:38] 2025-07-25 08:59:16,548 | INFO     | . log creation = 1 s
[2025-07-25 12:30:38] 2025-07-25 08:59:16,548 | INFO     | ..............................
[2025-07-25 12:30:38] 2025-07-25 08:59:17,144 | INFO     | 
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | job summary report
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | --------------------------------------------------
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | PanDA job id: 6741673718
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | task id: 45697453
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | errors: (none)
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | pilot state: finished 
[2025-07-25 12:30:38] 2025-07-25 08:59:17,145 | INFO     | transexitcode: 0
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | exeerrorcode: 0
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | exeerrordiag: 
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | exitcode: 0
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | exitmsg: OK
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | cpuconsumptiontime: 76554 s
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | nevents: 400
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | neventsw: 0
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | pid: 30409
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | pgrp: 30409
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | corecount: 8
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | event service: False
[2025-07-25 12:30:38] 2025-07-25 08:59:17,146 | INFO     | sizes: {0: 2397385, 1: 2397584, 10: 2397846, 12: 2397874, 20013: 2430358, 20019: 2439356, 20020: 2439540, 20118: 2439734}
[2025-07-25 12:30:38] 2025-07-25 08:59:17,147 | INFO     | --------------------------------------------------
[2025-07-25 12:30:38] 2025-07-25 08:59:17,147 | INFO     | 
[2025-07-25 12:30:38] 2025-07-25 08:59:17,147 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-07-25 12:30:38] 2025-07-25 08:59:17,681 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 12:30:38] 2025-07-25 08:59:17,684 | INFO     | job 6741673718 has completed (purged errors)
[2025-07-25 12:30:38] 2025-07-25 08:59:17,684 | INFO     | overall cleanup function is called
[2025-07-25 12:30:38] 2025-07-25 08:59:18,692 | INFO     | --- collectZombieJob: --- 10, [30409]
[2025-07-25 12:30:38] 2025-07-25 08:59:18,693 | INFO     | zombie collector waiting for pid 30409
[2025-07-25 12:30:38] 2025-07-25 08:59:18,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 12:30:38] 2025-07-25 08:59:18,693 | INFO     | collected zombie processes
[2025-07-25 12:30:38] 2025-07-25 08:59:18,693 | INFO     | will attempt to kill all subprocesses of pid=30409
[2025-07-25 12:30:38] 2025-07-25 08:59:18,796 | INFO     | process IDs to be killed: [30409] (in reverse order)
[2025-07-25 12:30:38] 2025-07-25 08:59:19,330 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 12:30:38] 2025-07-25 08:59:19,331 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 12:30:38] 2025-07-25 08:59:19,334 | INFO     | did not find any defunct processes belonging to 30409
[2025-07-25 12:30:38] 2025-07-25 08:59:19,342 | INFO     | did not find any defunct processes belonging to 30409
[2025-07-25 12:30:38] 2025-07-25 08:59:19,342 | INFO     | ready for new job
[2025-07-25 12:30:38] 2025-07-25 08:59:19,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 12:30:38] 2025-07-25 08:59:19,345 | INFO     | ***************************************
[2025-07-25 12:30:38] 2025-07-25 08:59:19,345 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 12:30:38] 2025-07-25 08:59:19,345 | INFO     | ***************************************
[2025-07-25 12:30:38] 2025-07-25 08:59:19,345 | INFO     | 
[2025-07-25 12:30:38] 2025-07-25 08:59:19,346 | INFO     | pilot is running in a VM
[2025-07-25 12:30:38] 2025-07-25 08:59:19,346 | INFO     | architecture information:
[2025-07-25 12:30:38] 2025-07-25 08:59:19,356 | INFO     | executing command: cat /etc/os-release
[2025-07-25 12:30:38] 2025-07-25 08:59:19,580 | INFO     | cat /etc/os-release:
[2025-07-25 12:30:38] NAME="CentOS Linux"
[2025-07-25 12:30:38] VERSION="7 (Core)"
[2025-07-25 12:30:38] ID="centos"
[2025-07-25 12:30:38] ID_LIKE="rhel fedora"
[2025-07-25 12:30:38] VERSION_ID="7"
[2025-07-25 12:30:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 12:30:38] ANSI_COLOR="0;31"
[2025-07-25 12:30:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 12:30:38] HOME_URL="https://www.centos.org/"
[2025-07-25 12:30:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 12:30:38] 
[2025-07-25 12:30:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 12:30:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 12:30:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 12:30:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 12:30:38] 
[2025-07-25 12:30:38] 2025-07-25 08:59:19,580 | INFO     | ***************************************
[2025-07-25 12:30:38] 2025-07-25 08:59:20,084 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-07-25 12:30:38] 2025-07-25 08:59:20,330 | INFO     | sufficient remaining disk space (495920873472 B)
[2025-07-25 12:30:38] 2025-07-25 08:59:20,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 12:30:38] 2025-07-25 08:59:20,331 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 12:30:38] 2025-07-25 08:59:20,331 | INFO     | update_server=False
[2025-07-25 12:30:38] 2025-07-25 08:59:20,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 12:30:38] 2025-07-25 08:59:20,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:30:38] 2025-07-25 08:59:20,331 | INFO     | aborting loop
[2025-07-25 12:30:38] 2025-07-25 08:59:20,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 12:30:38] 2025-07-25 08:59:20,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 12:30:38] 2025-07-25 08:59:20,829 | INFO     | all payload control threads have been joined
[2025-07-25 12:30:38] 2025-07-25 08:59:21,337 | INFO     | [job] retrieve thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:21,337 | INFO     | [job] job monitor thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:21,348 | INFO     | [job] validate thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:21,356 | INFO     | all data control threads have been joined
[2025-07-25 12:30:38] 2025-07-25 08:59:21,589 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:21,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 12:30:38] 2025-07-25 08:59:21,835 | INFO     | [payload] control thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,031 | INFO     | [payload] failed_post thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,038 | INFO     | all job control threads have been joined
[2025-07-25 12:30:38] 2025-07-25 08:59:22,299 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,365 | INFO     | [data] control thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,475 | INFO     | [payload] validate_post thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,705 | INFO     | [data] copytool_in thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,730 | INFO     | [job] queue monitor thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,808 | INFO     | [data] copytool_out thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:22,840 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:23,045 | INFO     | [job] control thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:24,348 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 12:30:38] 2025-07-25 08:59:25,615 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140535905519424)>', '<ExcThread(monitor, started 140535473886976)>']
[2025-07-25 12:30:38] 2025-07-25 08:59:30,640 | INFO     | all workflow threads have been joined
[2025-07-25 12:30:38] 2025-07-25 08:59:30,641 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 12:30:38] 2025-07-25 08:59:30,641 | INFO     | traces error code: 0
[2025-07-25 12:30:38] 2025-07-25 08:59:30,641 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 12:30:38] 2025-07-25 08:59:49,786 | INFO     | PID=23853 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 12:30:38] 2025-07-25 08:59:49,787 | INFO     | .. there are 9 such processes running
[2025-07-25 12:30:38] 2025-07-25 08:59:49,787 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 12:30:38] 2025-07-25 08:59:49,787 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 12:30:38] 2025-07-25 08:59:49,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 12:30:38] 2025-07-25 08:59:49,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 12:30:38] 2025-07-25 08:59:49,787 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 12:30:38] 2025-07-25 08:59:49,787 | INFO     | [monitor] control thread has ended
[2025-07-25 12:30:38] 2025-07-25 08:59:50,129 [wrapper] ==== pilot stdout END ====
[2025-07-25 12:30:38] 2025-07-25 08:59:50,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 12:30:38] 2025-07-25 08:59:50,382 [wrapper] pilotpid: 23853
[2025-07-25 12:30:38] 2025-07-25 08:59:50,471 [wrapper] Pilot exit status: 0
[2025-07-25 12:30:38] 2025-07-25 08:59:50,901 [wrapper] pandaids: 6741673718
[2025-07-25 12:30:38] 2025-07-25 08:59:51,701 [wrapper] cleanup supervisor_pilot  4139 23854
[2025-07-25 12:30:38] 2025-07-25 08:59:51,721 [wrapper] Test setup, not cleaning
[2025-07-25 12:30:38] 2025-07-25 08:59:51,737 [wrapper] apfmon messages muted
[2025-07-25 12:30:38] 2025-07-25 08:59:51,784 [wrapper] ==== wrapper stdout END ====
[2025-07-25 12:30:38] 2025-07-25 08:59:51,898 [wrapper] ==== wrapper stderr END ====
[2025-07-25 12:30:38]  *** Error codes and diagnostics ***
[2025-07-25 12:30:38]     "exeErrorCode": 0,
[2025-07-25 12:30:38]     "exeErrorDiag": "",
[2025-07-25 12:30:38]     "pilotErrorCode": 0,
[2025-07-25 12:30:38]     "pilotErrorDiag": "",
[2025-07-25 12:30:38]  *** Listing of results directory ***
[2025-07-25 12:30:38] total 576140
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc    530466 Jul 21 22:13 pilot3.tar.gz
[2025-07-25 12:30:38] -rwx------. 1 boinc boinc     36292 Jul 21 22:16 runpilot2-wrapper.sh
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc      5112 Jul 21 22:16 queuedata.json
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc       100 Jul 25 05:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 12:30:38] -rwxr-xr-x. 1 boinc boinc      7986 Jul 25 05:23 run_atlas
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc       105 Jul 25 05:23 job.xml
[2025-07-25 12:30:38] -rw-r--r--. 2 boinc boinc 320691060 Jul 25 05:23 EVNT.45697451._000010.pool.root.1
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc      6390 Jul 25 05:23 init_data.xml
[2025-07-25 12:30:38] -rw-r--r--. 2 boinc boinc     15095 Jul 25 05:23 start_atlas.sh
[2025-07-25 12:30:38] drwxrwx--x. 2 boinc boinc        68 Jul 25 05:23 shared
[2025-07-25 12:30:38] -rw-r--r--. 2 boinc boinc    542896 Jul 25 05:23 input.tar.gz
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc         0 Jul 25 05:23 boinc_lockfile
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc      2631 Jul 25 05:23 pandaJob.out
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc    979709 Jul 25 05:23 agis_schedconf.cvmfs.json
[2025-07-25 12:30:38] drwx------. 4 boinc boinc      4096 Jul 25 05:23 pilot3
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc 261119241 Jul 25 10:56 HITS.45697453._000233.pool.root.1
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc       531 Jul 25 10:56 boinc_task_state.xml
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc      1020 Jul 25 10:57 memory_monitor_summary.json
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc   1593052 Jul 25 10:57 agis_ddmendpoints.agis.ALL.json
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc    431791 Jul 25 10:57 log.45697453._000233.job.log.tgz.1
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc        95 Jul 25 10:58 pilot_heartbeat.json
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc      7768 Jul 25 10:59 heartbeat.json
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc       890 Jul 25 10:59 pilotlog.txt
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc   1716067 Jul 25 10:59 log.45697453._000233.job.log.1
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc       357 Jul 25 10:59 output.list
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc       620 Jul 25 10:59 runtime_log
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc   2170880 Jul 25 10:59 result.tar.gz
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc      8660 Jul 25 10:59 runtime_log.err
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc       658 Jul 25 10:59 2bkMDmp6By7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSvsKDmXPvbHo.diag
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc      8192 Jul 25 12:30 boinc_mmap_file
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc        28 Jul 25 12:30 wrapper_checkpoint.txt
[2025-07-25 12:30:38] -rw-r--r--. 1 boinc boinc     20572 Jul 25 12:30 stderr.txt
[2025-07-25 12:30:38] HITS file was successfully produced:
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc 261119241 Jul 25 10:56 shared/HITS.pool.root.1
[2025-07-25 12:30:38]  *** Contents of shared directory: ***
[2025-07-25 12:30:38] total 570844
[2025-07-25 12:30:38] -rw-r--r--. 2 boinc boinc 320691060 Jul 25 05:23 ATLAS.root_0
[2025-07-25 12:30:38] -rw-r--r--. 2 boinc boinc     15095 Jul 25 05:23 start_atlas.sh
[2025-07-25 12:30:38] -rw-r--r--. 2 boinc boinc    542896 Jul 25 05:23 input.tar.gz
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc 261119241 Jul 25 10:56 HITS.pool.root.1
[2025-07-25 12:30:38] -rw-------. 1 boinc boinc   2170880 Jul 25 10:59 result.tar.gz
12:30:40 (19843): run_atlas exited; CPU time 76801.156338
12:30:40 (19843): called boinc_finish(0)

</stderr_txt>
]]>

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