Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:18:54 (2134636): wrapper (7.7.26015): starting
06:18:54 (2134636): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 06:18:54] Arguments: --nthreads 8
[2025-07-24 06:18:54] Threads: 8
[2025-07-24 06:18:54] Checking for CVMFS
[2025-07-24 06:18:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 06:18:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 06:18:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 06:18:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 06:18:55] 2.13.1.0 116762 3944 185252 148693 2 9 33496013 40960000 113 16776704 0 46313492 99.998 167442 42326 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 06:18:55] CVMFS is ok
[2025-07-24 06:18:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 06:18:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 06:18:55] Further information can be found at the LHC@home message board.
[2025-07-24 06:18:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 06:18:55] Checking for apptainer binary...
[2025-07-24 06:18:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 06:18:55] Running /usr/bin/apptainer --version
[2025-07-24 06:18:55] apptainer version 1.4.1-1.el9
[2025-07-24 06:18:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 06:18:55] c-208-39.aglt2.org
[2025-07-24 06:18:55] apptainer works
[2025-07-24 06:18:55] Set ATHENA_PROC_NUMBER=8
[2025-07-24 06:18:55] Set ATHENA_CORE_NUMBER=8
[2025-07-24 06:18:55] Starting ATLAS job with PandaID=6744423559
[2025-07-24 06:18:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 07:09:54]  *** The last 200 lines of the pilot log: ***
[2025-07-24 07:09:54]  lfn=log.45668900._001011.job.log.tgz.1
[2025-07-24 07:09:54]  mtime=0
[2025-07-24 07:09:54]  protocol_id=None
[2025-07-24 07:09:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 07:09:54]  replicas=None
[2025-07-24 07:09:54]  scope=mc23_13p6TeV
[2025-07-24 07:09:54]  status=None
[2025-07-24 07:09:54]  status_code=0
[2025-07-24 07:09:54]  storage_token=
[2025-07-24 07:09:54]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6744423559/log.45668900._001011.job.log.tgz.1
[2025-07-24 07:09:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/b3/log.45668900._001011.job.log.tgz.1
[2025-07-24 07:09:54]  workdir=None
[2025-07-24 07:09:54] ]
[2025-07-24 07:09:54] 2025-07-24 11:09:18,672 | INFO     | transferring file log.45668900._001011.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6744423559/log.45668900._001011.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-24 07:09:54] 2025-07-24 11:09:18,673 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6744423559/log.45668900._001011.job.log.tgz.1 /tmp/boinchome/slots/0/log.45668900._001011.job
[2025-07-24 07:09:54] 2025-07-24 11:09:18,684 | INFO     | adding to output.list: log.45668900._001011.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/10/b3/log.45668900._001011.job.log.tg
[2025-07-24 07:09:54] 2025-07-24 11:09:18,684 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 07:09:54] 2025-07-24 11:09:18,684 | INFO     | summary of transferred files:
[2025-07-24 07:09:54] 2025-07-24 11:09:18,685 | INFO     |  -- lfn=log.45668900._001011.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 07:09:54] 2025-07-24 11:09:18,685 | INFO     | stage-out finished correctly
[2025-07-24 07:09:54] 2025-07-24 11:09:19,049 | WARNING  | process 2144682 can no longer be monitored (due to stat problems) - aborting
[2025-07-24 07:09:54] 2025-07-24 11:09:19,049 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744423559/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 07:09:54] 2025-07-24 11:09:19,220 | INFO     | number of running child processes to parent process 2144682: 1
[2025-07-24 07:09:54] 2025-07-24 11:09:19,220 | INFO     | maximum number of monitored processes: 6
[2025-07-24 07:09:54] 2025-07-24 11:09:20,297 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 07:09:54] 2025-07-24 11:09:20,326 | INFO     | job 6744423559 has state=finished
[2025-07-24 07:09:54] 2025-07-24 11:09:20,326 | INFO     | preparing for final server update for job 6744423559 in state='finished'
[2025-07-24 07:09:54] 2025-07-24 11:09:20,326 | INFO     | this job has now completed (state=finished)
[2025-07-24 07:09:54] 2025-07-24 11:09:20,326 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 07:09:54] 2025-07-24 11:09:20,326 | INFO     | log transfer has been attempted: DONE
[2025-07-24 07:09:54] 2025-07-24 11:09:20,327 | INFO     | job 6744423559 has finished - writing final server update
[2025-07-24 07:09:54] 2025-07-24 11:09:20,327 | INFO     | total number of processed events: 400 (read)
[2025-07-24 07:09:54] 2025-07-24 11:09:20,327 | INFO     | executing command: lscpu
[2025-07-24 07:09:54] 2025-07-24 11:09:20,366 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 07:09:54] 2025-07-24 11:09:21,723 | INFO     | monitor loop #230: job 0:6744423559 is in state 'finished'
[2025-07-24 07:09:54] 2025-07-24 11:09:21,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 07:09:54] 2025-07-24 11:09:22,673 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-24 07:09:54] 2025-07-24 11:09:22,676 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3348.155281250004
[2025-07-24 07:09:54] 2025-07-24 11:09:22,684 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744423559/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 07:09:54] 2025-07-24 11:09:22,684 | INFO     | extracted standard info from prmon json
[2025-07-24 07:09:54] 2025-07-24 11:09:22,684 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 07:09:54] 2025-07-24 11:09:22,684 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | INFO     | fitting pss+swap vs Time
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | INFO     | sum of square deviations: 24640462.0
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | INFO     | sum of deviations: -264703948.99999994
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | INFO     | mean x: 1753353947.0
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | INFO     | mean y: 2574892.3488372094
[2025-07-24 07:09:54] 2025-07-24 11:09:22,685 | INFO     | -- intersect: 18838249067.84265
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | intersect: 18838249067.84265
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | chi2: 0.02236740744165741
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | -- intersect: 18838249067.84265
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | current memory leak: -10.74 B/s (using 43 data points, chi2=0.02)
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | could have reported an average CPU frequency of 3348 MHz (5 samples)
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | ..............................
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . Timing measurements:
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . get job = 0 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . initial setup = 1 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . payload setup = 3 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . stage-in = 0 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . payload execution = 2996 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . stage-out = 0 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | . log creation = 0 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,686 | INFO     | ..............................
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | 
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | job summary report
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | --------------------------------------------------
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | PanDA job id: 6744423559
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | task id: 45668900
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | errors: (none)
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | pilot state: finished 
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | transexitcode: 0
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | exeerrorcode: 0
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | exeerrordiag: 
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | exitcode: 0
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | exitmsg: OK
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | cpuconsumptiontime: 22384 s
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | nevents: 400
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | neventsw: 0
[2025-07-24 07:09:54] 2025-07-24 11:09:22,717 | INFO     | pid: 2144682
[2025-07-24 07:09:54] 2025-07-24 11:09:22,718 | INFO     | pgrp: 2144682
[2025-07-24 07:09:54] 2025-07-24 11:09:22,718 | INFO     | corecount: 8
[2025-07-24 07:09:54] 2025-07-24 11:09:22,718 | INFO     | event service: False
[2025-07-24 07:09:54] 2025-07-24 11:09:22,718 | INFO     | sizes: {0: 2397428, 2: 2397690, 10: 2397718, 3003: 2423170, 3004: 2432168, 3005: 2432224, 3008: 2432578}
[2025-07-24 07:09:54] 2025-07-24 11:09:22,718 | INFO     | --------------------------------------------------
[2025-07-24 07:09:54] 2025-07-24 11:09:22,718 | INFO     | 
[2025-07-24 07:09:54] 2025-07-24 11:09:22,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | job 6744423559 has completed (purged errors)
[2025-07-24 07:09:54] 2025-07-24 11:09:22,730 | INFO     | overall cleanup function is called
[2025-07-24 07:09:54] 2025-07-24 11:09:23,737 | INFO     | --- collectZombieJob: --- 10, [2144682]
[2025-07-24 07:09:54] 2025-07-24 11:09:23,738 | INFO     | zombie collector waiting for pid 2144682
[2025-07-24 07:09:54] 2025-07-24 11:09:23,738 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 07:09:54] 2025-07-24 11:09:23,738 | INFO     | collected zombie processes
[2025-07-24 07:09:54] 2025-07-24 11:09:23,738 | INFO     | will attempt to kill all subprocesses of pid=2144682
[2025-07-24 07:09:54] 2025-07-24 11:09:23,909 | INFO     | process IDs to be killed: [2144682] (in reverse order)
[2025-07-24 07:09:54] 2025-07-24 11:09:23,975 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 07:09:54] 2025-07-24 11:09:23,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 07:09:54] 2025-07-24 11:09:23,983 | INFO     | did not find any defunct processes belonging to 2144682
[2025-07-24 07:09:54] 2025-07-24 11:09:23,989 | INFO     | did not find any defunct processes belonging to 2144682
[2025-07-24 07:09:54] 2025-07-24 11:09:23,989 | INFO     | ready for new job
[2025-07-24 07:09:54] 2025-07-24 11:09:23,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 07:09:54] 2025-07-24 11:09:23,989 | INFO     | ***************************************
[2025-07-24 07:09:54] 2025-07-24 11:09:23,990 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 07:09:54] 2025-07-24 11:09:23,990 | INFO     | ***************************************
[2025-07-24 07:09:54] 2025-07-24 11:09:23,990 | INFO     | 
[2025-07-24 07:09:54] 2025-07-24 11:09:23,993 | INFO     | architecture information:
[2025-07-24 07:09:54] 2025-07-24 11:09:23,993 | INFO     | executing command: cat /etc/os-release
[2025-07-24 07:09:54] 2025-07-24 11:09:24,002 | INFO     | cat /etc/os-release:
[2025-07-24 07:09:54] NAME="CentOS Linux"
[2025-07-24 07:09:54] VERSION="7 (Core)"
[2025-07-24 07:09:54] ID="centos"
[2025-07-24 07:09:54] ID_LIKE="rhel fedora"
[2025-07-24 07:09:54] VERSION_ID="7"
[2025-07-24 07:09:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 07:09:54] ANSI_COLOR="0;31"
[2025-07-24 07:09:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 07:09:54] HOME_URL="https://www.centos.org/"
[2025-07-24 07:09:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 07:09:54] 
[2025-07-24 07:09:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 07:09:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 07:09:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 07:09:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 07:09:54] 
[2025-07-24 07:09:54] 2025-07-24 11:09:24,002 | INFO     | ***************************************
[2025-07-24 07:09:54] 2025-07-24 11:09:24,505 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 07:09:54] 2025-07-24 11:09:24,514 | INFO     | sufficient remaining disk space (172922765312 B)
[2025-07-24 07:09:54] 2025-07-24 11:09:24,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 07:09:54] 2025-07-24 11:09:24,515 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 07:09:54] 2025-07-24 11:09:24,515 | INFO     | update_server=False
[2025-07-24 07:09:54] 2025-07-24 11:09:24,515 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 07:09:54] 2025-07-24 11:09:24,515 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 07:09:54] 2025-07-24 11:09:24,515 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 07:09:54] 2025-07-24 11:09:24,638 | INFO     | all data control threads have been joined
[2025-07-24 07:09:54] 2025-07-24 11:09:24,965 | INFO     | all job control threads have been joined
[2025-07-24 07:09:54] 2025-07-24 11:09:25,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 07:09:54] 2025-07-24 11:09:25,232 | INFO     | aborting loop
[2025-07-24 07:09:54] 2025-07-24 11:09:25,520 | INFO     | [job] retrieve thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:25,521 | INFO     | [job] queue monitor thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:25,592 | INFO     | all payload control threads have been joined
[2025-07-24 07:09:54] 2025-07-24 11:09:25,599 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:25,643 | INFO     | [data] control thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:25,743 | INFO     | [job] validate thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:25,785 | INFO     | [payload] validate_post thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:25,807 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:25,970 | INFO     | [job] control thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:26,237 | INFO     | [job] job monitor thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:26,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 07:09:54] 2025-07-24 11:09:26,521 | INFO     | [data] copytool_out thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:26,590 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:26,598 | INFO     | [payload] control thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:26,798 | INFO     | [data] copytool_in thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:26,928 | INFO     | [payload] failed_post thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:30,337 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:35,047 | INFO     | job.realtimelogging is not enabled
[2025-07-24 07:09:54] 2025-07-24 11:09:36,053 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 07:09:54] 2025-07-24 11:09:37,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456320673600)>', '<ExcThread(monitor, started 140455681447680)>']
[2025-07-24 07:09:54] 2025-07-24 11:09:42,940 | INFO     | all workflow threads have been joined
[2025-07-24 07:09:54] 2025-07-24 11:09:42,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 07:09:54] 2025-07-24 11:09:42,940 | INFO     | traces error code: 0
[2025-07-24 07:09:54] 2025-07-24 11:09:42,940 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 07:09:54] 2025-07-24 11:09:54,641 | INFO     | PID=2138248 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 07:09:54] 2025-07-24 11:09:54,641 | INFO     | .. there are 2 such processes running
[2025-07-24 07:09:54] 2025-07-24 11:09:54,641 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 07:09:54] 2025-07-24 11:09:54,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 07:09:54] 2025-07-24 11:09:54,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 07:09:54] 2025-07-24 11:09:54,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 07:09:54] 2025-07-24 11:09:54,641 | INFO     | [monitor] control thread has ended
[2025-07-24 07:09:54] 2025-07-24 11:09:54,695 [wrapper] ==== pilot stdout END ====
[2025-07-24 07:09:54] 2025-07-24 11:09:54,697 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 07:09:54] 2025-07-24 11:09:54,699 [wrapper] pilotpid: 2138248
[2025-07-24 07:09:54] 2025-07-24 11:09:54,701 [wrapper] Pilot exit status: 0
[2025-07-24 07:09:54] 2025-07-24 11:09:54,707 [wrapper] pandaids: 6744423559
[2025-07-24 07:09:54] 2025-07-24 11:09:54,756 [wrapper] cleanup supervisor_pilot 2184741 2138249
[2025-07-24 07:09:54] 2025-07-24 11:09:54,758 [wrapper] Test setup, not cleaning
[2025-07-24 07:09:54] 2025-07-24 11:09:54,759 [wrapper] apfmon messages muted
[2025-07-24 07:09:54] 2025-07-24 11:09:54,761 [wrapper] ==== wrapper stdout END ====
[2025-07-24 07:09:54] 2025-07-24 11:09:54,762 [wrapper] ==== wrapper stderr END ====
[2025-07-24 07:09:54]  *** Error codes and diagnostics ***
[2025-07-24 07:09:54]     "exeErrorCode": 0,
[2025-07-24 07:09:54]     "exeErrorDiag": "",
[2025-07-24 07:09:54]     "pilotErrorCode": 0,
[2025-07-24 07:09:54]     "pilotErrorDiag": "",
[2025-07-24 07:09:54]  *** Listing of results directory ***
[2025-07-24 07:09:54] total 463460
[2025-07-24 07:09:54] -rwx------. 1 boincer umatlas     36292 Jul 24 03:47 runpilot2-wrapper.sh
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 03:47 pilot3.tar.gz
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 03:47 queuedata.json
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas       100 Jul 24 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 07:09:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 06:18 run_atlas
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas       105 Jul 24 06:18 job.xml
[2025-07-24 07:09:54] -rw-r--r--. 2 boincer umatlas 274342166 Jul 24 06:18 EVNT.45668898._000040.pool.root.1
[2025-07-24 07:09:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 06:18 start_atlas.sh
[2025-07-24 07:09:54] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 06:18 shared
[2025-07-24 07:09:54] -rw-r--r--. 2 boincer umatlas    542884 Jul 24 06:18 input.tar.gz
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas         0 Jul 24 06:18 boinc_lockfile
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas      2537 Jul 24 06:18 pandaJob.out
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas    978939 Jul 24 06:18 agis_schedconf.cvmfs.json
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas   1593041 Jul 24 06:19 agis_ddmendpoints.agis.ALL.json
[2025-07-24 07:09:54] drwx------. 4 boincer umatlas      4096 Jul 24 06:19 pilot3
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas      7173 Jul 24 07:02 init_data.xml
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas 195139107 Jul 24 07:08 HITS.45668900._001011.pool.root.1
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas       529 Jul 24 07:09 boinc_task_state.xml
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas      1013 Jul 24 07:09 memory_monitor_summary.json
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas    298377 Jul 24 07:09 log.45668900._001011.job.log.tgz.1
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas      7745 Jul 24 07:09 heartbeat.json
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 07:09 boinc_mmap_file
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas        27 Jul 24 07:09 wrapper_checkpoint.txt
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas       822 Jul 24 07:09 pilotlog.txt
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas        95 Jul 24 07:09 pilot_heartbeat.json
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas    320268 Jul 24 07:09 log.45668900._001011.job.log.1
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas       357 Jul 24 07:09 output.list
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas       620 Jul 24 07:09 runtime_log
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas    634880 Jul 24 07:09 result.tar.gz
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas      8660 Jul 24 07:09 runtime_log.err
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas       650 Jul 24 07:09 rRAODmWq5y7n9Rq4apOajLDm4fhM0noT9bVof3QYDmwdwKDm3J0mnn.diag
[2025-07-24 07:09:54] -rw-r--r--. 1 boincer umatlas     21657 Jul 24 07:09 stderr.txt
[2025-07-24 07:09:54] HITS file was successfully produced:
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas 195139107 Jul 24 07:08 shared/HITS.pool.root.1
[2025-07-24 07:09:54]  *** Contents of shared directory: ***
[2025-07-24 07:09:54] total 459652
[2025-07-24 07:09:54] -rw-r--r--. 2 boincer umatlas 274342166 Jul 24 06:18 ATLAS.root_0
[2025-07-24 07:09:54] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 06:18 start_atlas.sh
[2025-07-24 07:09:54] -rw-r--r--. 2 boincer umatlas    542884 Jul 24 06:18 input.tar.gz
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas 195139107 Jul 24 07:08 HITS.pool.root.1
[2025-07-24 07:09:54] -rw-------. 1 boincer umatlas    634880 Jul 24 07:09 result.tar.gz
07:09:55 (2134636): run_atlas exited; CPU time 22412.204096
07:09:55 (2134636): called boinc_finish(0)

</stderr_txt>
]]>

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