Stderr output

<core_client_version>8.0.3</core_client_version>
<![CDATA[
<stderr_txt>
10:57:11 (2137989): wrapper (7.7.26015): starting
10:57:11 (2137989): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 10:57:11] Arguments: --nthreads 4
[2025-07-26 10:57:11] Threads: 4
[2025-07-26 10:57:11] Checking for CVMFS
[2025-07-26 10:57:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-26 10:57:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-26 10:57:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-26 10:57:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-26 10:57:11] 2.12.7.0 1958 6071 60960 148770 0 57 3221892 4096000 917 130560 0 5846382 99.991 228356 3176 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-07-26 10:57:11] CVMFS is ok
[2025-07-26 10:57:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 10:57:11] Checking for apptainer binary...
[2025-07-26 10:57:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-26 10:57:11] Running /usr/bin/apptainer --version
[2025-07-26 10:57:11] apptainer version 1.4.1
[2025-07-26 10:57:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 10:57:12] TC-910
[2025-07-26 10:57:12] apptainer works
[2025-07-26 10:57:12] Set ATHENA_PROC_NUMBER=4
[2025-07-26 10:57:12] Set ATHENA_CORE_NUMBER=4
[2025-07-26 10:57:12] Starting ATLAS job with PandaID=6741919611
[2025-07-26 10:57:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 14:04:05]  *** The last 200 lines of the pilot log: ***
[2025-07-26 14:04:05] 2025-07-26 12:03:49,714 | INFO     | intersect: -5565038285.162343
[2025-07-26 14:04:05] 2025-07-26 12:03:49,714 | INFO     | chi2: 1.1614410057117728
[2025-07-26 14:04:05] 2025-07-26 12:03:49,714 | INFO     | current chi2=1.1614410057117728 (change=0.055839834429895686 %)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,714 | INFO     | right removable region: 177
[2025-07-26 14:04:05] 2025-07-26 12:03:49,714 | INFO     | sum of square deviations: 1748737904.5
[2025-07-26 14:04:05] 2025-07-26 12:03:49,715 | INFO     | sum of deviations: -5694836078.499999
[2025-07-26 14:04:05] 2025-07-26 12:03:49,716 | INFO     | mean x: 1753525960.5
[2025-07-26 14:04:05] 2025-07-26 12:03:49,716 | INFO     | mean y: 2417229.162921348
[2025-07-26 14:04:05] 2025-07-26 12:03:49,716 | INFO     | -- intersect: 5712845806.678646
[2025-07-26 14:04:05] 2025-07-26 12:03:49,716 | INFO     | intersect: 5712845806.678646
[2025-07-26 14:04:05] 2025-07-26 12:03:49,716 | INFO     | chi2: 0.10415622466745124
[2025-07-26 14:04:05] 2025-07-26 12:03:49,717 | INFO     | current chi2=0.10415622466745124 (change=91.03716301627792 %)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,717 | INFO     | sum of square deviations: 1605470102.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,717 | INFO     | sum of deviations: 1189078855.9999986
[2025-07-26 14:04:05] 2025-07-26 12:03:49,718 | INFO     | mean x: 1753526113.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,718 | INFO     | mean y: 2409925.8670520233
[2025-07-26 14:04:05] 2025-07-26 12:03:49,718 | INFO     | -- intersect: -1296325455.012787
[2025-07-26 14:04:05] 2025-07-26 12:03:49,718 | INFO     | intersect: -1296325455.012787
[2025-07-26 14:04:05] 2025-07-26 12:03:49,718 | INFO     | chi2: 0.04967856979010507
[2025-07-26 14:04:05] 2025-07-26 12:03:49,718 | INFO     | current chi2=0.04967856979010507 (change=52.303791781318665 %)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,718 | INFO     | sum of square deviations: 1470248962.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,719 | INFO     | sum of deviations: 6244913460.499999
[2025-07-26 14:04:05] 2025-07-26 12:03:49,719 | INFO     | mean x: 1753526265.5
[2025-07-26 14:04:05] 2025-07-26 12:03:49,719 | INFO     | mean y: 2404221.863095238
[2025-07-26 14:04:05] 2025-07-26 12:03:49,719 | INFO     | -- intersect: -7445735557.038681
[2025-07-26 14:04:05] 2025-07-26 12:03:49,719 | INFO     | intersect: -7445735557.038681
[2025-07-26 14:04:05] 2025-07-26 12:03:49,719 | INFO     | chi2: 0.012790252886795478
[2025-07-26 14:04:05] 2025-07-26 12:03:49,720 | INFO     | current chi2=0.012790252886795478 (change=74.2539832752129 %)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,720 | INFO     | sum of square deviations: 1342841922.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,720 | INFO     | sum of deviations: 6184074409.000001
[2025-07-26 14:04:05] 2025-07-26 12:03:49,720 | INFO     | mean x: 1753526418.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,721 | INFO     | mean y: 2404329.656441718
[2025-07-26 14:04:05] 2025-07-26 12:03:49,721 | INFO     | -- intersect: -8072960066.853097
[2025-07-26 14:04:05] 2025-07-26 12:03:49,721 | INFO     | intersect: -8072960066.853097
[2025-07-26 14:04:05] 2025-07-26 12:03:49,721 | INFO     | chi2: 0.0033096003999080288
[2025-07-26 14:04:05] 2025-07-26 12:03:49,721 | INFO     | current chi2=0.0033096003999080288 (change=74.12404250955174 %)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,721 | INFO     | sum of square deviations: 1223016419.5
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | sum of deviations: 5186010221.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | mean x: 1753526570.5
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | mean y: 2405596.6329113925
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | -- intersect: -7433150110.072854
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | intersect: -7433150110.072854
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | chi2: 0.0029498656692780135
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | current chi2=0.0029498656692780135 (change=10.869430963327536 %)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | left removable region: 50
[2025-07-26 14:04:05] 2025-07-26 12:03:49,722 | INFO     | sum of square deviations: 635130048.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | sum of deviations: 2560662636.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | mean x: 1753527150.0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | mean y: 2407455.2677165354
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | -- intersect: -7067312310.559781
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | intersect: -7067312310.559781
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | chi2: 0.00266658579411475
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | -- intersect: -7067312310.559781
[2025-07-26 14:04:05] 2025-07-26 12:03:49,723 | INFO     | current memory leak: 4.03 B/s (using 127 data points, chi2=0.00)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | could have reported an average CPU frequency of 4006 MHz (10 samples)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | ..............................
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . Timing measurements:
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . get job = 0 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . initial setup = 1 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . payload setup = 3 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . stage-in = 0 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . payload execution = 11161 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . stage-out = 0 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | . log creation = 0 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,724 | INFO     | ..............................
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | 
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | job summary report
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | --------------------------------------------------
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | PanDA job id: 6741919611
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | task id: 45697472
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | errors: (none)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | pilot state: finished 
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | transexitcode: 0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | exeerrorcode: 0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | exeerrordiag: 
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | exitcode: 0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | exitmsg: OK
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | cpuconsumptiontime: 42643 s
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | nevents: 400
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | neventsw: 0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | pid: 2148082
[2025-07-26 14:04:05] 2025-07-26 12:03:49,792 | INFO     | pgrp: 2148082
[2025-07-26 14:04:05] 2025-07-26 12:03:49,793 | INFO     | corecount: 4
[2025-07-26 14:04:05] 2025-07-26 12:03:49,793 | INFO     | event service: False
[2025-07-26 14:04:05] 2025-07-26 12:03:49,793 | INFO     | sizes: {0: 2397492, 2: 2397754, 11: 2397782, 11169: 2427165, 11170: 2436163, 11174: 2436219, 11179: 2436541}
[2025-07-26 14:04:05] 2025-07-26 12:03:49,793 | INFO     | --------------------------------------------------
[2025-07-26 14:04:05] 2025-07-26 12:03:49,793 | INFO     | 
[2025-07-26 14:04:05] 2025-07-26 12:03:49,793 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,804 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | job 6741919611 has completed (purged errors)
[2025-07-26 14:04:05] 2025-07-26 12:03:49,805 | INFO     | overall cleanup function is called
[2025-07-26 14:04:05] 2025-07-26 12:03:50,811 | INFO     | --- collectZombieJob: --- 10, [2148082]
[2025-07-26 14:04:05] 2025-07-26 12:03:50,812 | INFO     | zombie collector waiting for pid 2148082
[2025-07-26 14:04:05] 2025-07-26 12:03:50,812 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 14:04:05] 2025-07-26 12:03:50,812 | INFO     | collected zombie processes
[2025-07-26 14:04:05] 2025-07-26 12:03:50,812 | INFO     | will attempt to kill all subprocesses of pid=2148082
[2025-07-26 14:04:05] 2025-07-26 12:03:50,888 | INFO     | process IDs to be killed: [2148082] (in reverse order)
[2025-07-26 14:04:05] 2025-07-26 12:03:50,916 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 14:04:05] 2025-07-26 12:03:50,916 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 14:04:05] 2025-07-26 12:03:50,918 | INFO     | did not find any defunct processes belonging to 2148082
[2025-07-26 14:04:05] 2025-07-26 12:03:50,919 | INFO     | did not find any defunct processes belonging to 2148082
[2025-07-26 14:04:05] 2025-07-26 12:03:50,919 | INFO     | ready for new job
[2025-07-26 14:04:05] 2025-07-26 12:03:50,919 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 14:04:05] 2025-07-26 12:03:50,920 | INFO     | ***************************************
[2025-07-26 14:04:05] 2025-07-26 12:03:50,920 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 14:04:05] 2025-07-26 12:03:50,920 | INFO     | ***************************************
[2025-07-26 14:04:05] 2025-07-26 12:03:50,920 | INFO     | 
[2025-07-26 14:04:05] 2025-07-26 12:03:50,921 | INFO     | architecture information:
[2025-07-26 14:04:05] 2025-07-26 12:03:50,921 | INFO     | executing command: cat /etc/os-release
[2025-07-26 14:04:05] 2025-07-26 12:03:50,930 | INFO     | cat /etc/os-release:
[2025-07-26 14:04:05] NAME="CentOS Linux"
[2025-07-26 14:04:05] VERSION="7 (Core)"
[2025-07-26 14:04:05] ID="centos"
[2025-07-26 14:04:05] ID_LIKE="rhel fedora"
[2025-07-26 14:04:05] VERSION_ID="7"
[2025-07-26 14:04:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 14:04:05] ANSI_COLOR="0;31"
[2025-07-26 14:04:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 14:04:05] HOME_URL="https://www.centos.org/"
[2025-07-26 14:04:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 14:04:05] 
[2025-07-26 14:04:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 14:04:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 14:04:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 14:04:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 14:04:05] 
[2025-07-26 14:04:05] 2025-07-26 12:03:50,930 | INFO     | ***************************************
[2025-07-26 14:04:05] 2025-07-26 12:03:51,433 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-07-26 14:04:05] 2025-07-26 12:03:51,442 | INFO     | sufficient remaining disk space (165680250880 B)
[2025-07-26 14:04:05] 2025-07-26 12:03:51,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 14:04:05] 2025-07-26 12:03:51,442 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 14:04:05] 2025-07-26 12:03:51,442 | INFO     | update_server=False
[2025-07-26 14:04:05] 2025-07-26 12:03:51,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 14:04:05] 2025-07-26 12:03:51,442 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-26 14:04:05] 2025-07-26 12:03:51,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 14:04:05] 2025-07-26 12:03:51,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:04:05] 2025-07-26 12:03:51,443 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 14:04:05] 2025-07-26 12:03:51,443 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 14:04:05] 2025-07-26 12:03:51,443 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 14:04:05] 2025-07-26 12:03:51,559 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-26 14:04:05] 2025-07-26 12:03:51,559 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-26 14:04:05] 2025-07-26 12:03:51,559 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 14:04:05] 2025-07-26 12:03:51,559 | INFO     | will abort loop
[2025-07-26 14:04:05] 2025-07-26 12:03:51,759 | INFO     | all payload control threads have been joined
[2025-07-26 14:04:05] 2025-07-26 12:03:51,834 | INFO     | all job control threads have been joined
[2025-07-26 14:04:05] 2025-07-26 12:03:52,027 | INFO     | all data control threads have been joined
[2025-07-26 14:04:05] 2025-07-26 12:03:52,447 | INFO     | [job] queue monitor thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:52,447 | INFO     | [job] retrieve thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:52,527 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:52,564 | INFO     | [job] job monitor thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:52,668 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:52,764 | INFO     | [payload] control thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:52,838 | INFO     | [job] control thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,030 | INFO     | [data] control thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,034 | INFO     | [payload] validate_post thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,150 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,190 | INFO     | [payload] failed_post thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,447 | INFO     | [data] copytool_out thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,607 | INFO     | [data] copytool_in thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,684 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:53,727 | INFO     | [job] validate thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:03:54,684 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 14:04:05] 2025-07-26 12:03:58,687 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 14:04:05] 2025-07-26 12:04:00,257 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139622077118272)>', '<ExcThread(monitor, started 139621576984320)>']
[2025-07-26 14:04:05] 2025-07-26 12:04:00,477 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 14:04:05] 2025-07-26 12:04:00,477 | INFO     | [monitor] control thread has ended
[2025-07-26 14:04:05] 2025-07-26 12:04:05,280 | INFO     | all workflow threads have been joined
[2025-07-26 14:04:05] 2025-07-26 12:04:05,281 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 14:04:05] 2025-07-26 12:04:05,281 | INFO     | traces error code: 0
[2025-07-26 14:04:05] 2025-07-26 12:04:05,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 14:04:05] 2025-07-26 12:04:05,354 [wrapper] ==== pilot stdout END ====
[2025-07-26 14:04:05] 2025-07-26 12:04:05,356 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 14:04:05] 2025-07-26 12:04:05,357 [wrapper] pilotpid: 2141615
[2025-07-26 14:04:05] 2025-07-26 12:04:05,359 [wrapper] Pilot exit status: 0
[2025-07-26 14:04:05] 2025-07-26 12:04:05,366 [wrapper] pandaids: 6741919611
[2025-07-26 14:04:05] 2025-07-26 12:04:05,385 [wrapper] cleanup supervisor_pilot 2202877 2141616
[2025-07-26 14:04:05] 2025-07-26 12:04:05,387 [wrapper] Test setup, not cleaning
[2025-07-26 14:04:05] 2025-07-26 12:04:05,389 [wrapper] apfmon messages muted
[2025-07-26 14:04:05] 2025-07-26 12:04:05,390 [wrapper] ==== wrapper stdout END ====
[2025-07-26 14:04:05] 2025-07-26 12:04:05,392 [wrapper] ==== wrapper stderr END ====
[2025-07-26 14:04:05]  *** Error codes and diagnostics ***
[2025-07-26 14:04:05]     "exeErrorCode": 0,
[2025-07-26 14:04:05]     "exeErrorDiag": "",
[2025-07-26 14:04:05]     "pilotErrorCode": 0,
[2025-07-26 14:04:05]     "pilotErrorDiag": "",
[2025-07-26 14:04:05]  *** Listing of results directory ***
[2025-07-26 14:04:05] insgesamt 603328
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc    530466 23. Jul 12:29 pilot3.tar.gz
[2025-07-26 14:04:05] -rwx------ 1 boinc boinc     36292 23. Jul 12:30 runpilot2-wrapper.sh
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc      5112 23. Jul 12:30 queuedata.json
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc       100 26. Jul 10:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 14:04:05] -rwxr-xr-x 1 boinc boinc      7986 26. Jul 10:57 run_atlas
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc       105 26. Jul 10:57 job.xml
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc      9787 26. Jul 10:57 init_data.xml
[2025-07-26 14:04:05] -rw-r--r-- 2 boinc boinc 333725726 26. Jul 10:57 EVNT.45697470._000072.pool.root.1
[2025-07-26 14:04:05] drwxrwx--x 2 boinc boinc      4096 26. Jul 10:57 shared
[2025-07-26 14:04:05] -rw-r--r-- 2 boinc boinc    542898 26. Jul 10:57 input.tar.gz
[2025-07-26 14:04:05] -rw-r--r-- 2 boinc boinc     15095 26. Jul 10:57 start_atlas.sh
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc         0 26. Jul 10:57 boinc_lockfile
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc      2610 26. Jul 10:57 pandaJob.out
[2025-07-26 14:04:05] -rw------- 1 boinc boinc    980133 26. Jul 10:57 agis_schedconf.cvmfs.json
[2025-07-26 14:04:05] drwx------ 4 boinc boinc      4096 26. Jul 10:57 pilot3
[2025-07-26 14:04:05] -rw------- 1 boinc boinc        95 26. Jul 14:02 pilot_heartbeat.json
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc       530 26. Jul 14:03 boinc_task_state.xml
[2025-07-26 14:04:05] -rw------- 1 boinc boinc 277422903 26. Jul 14:03 HITS.45697472._005217.pool.root.1
[2025-07-26 14:04:05] -rw------- 1 boinc boinc      1024 26. Jul 14:03 memory_monitor_summary.json
[2025-07-26 14:04:05] -rw------- 1 boinc boinc   1593052 26. Jul 14:03 agis_ddmendpoints.agis.ALL.json
[2025-07-26 14:04:05] -rw------- 1 boinc boinc    311432 26. Jul 14:03 log.45697472._005217.job.log.tgz.1
[2025-07-26 14:04:05] -rw------- 1 boinc boinc      7752 26. Jul 14:03 heartbeat.json
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc      8192 26. Jul 14:03 boinc_mmap_file
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc        28 26. Jul 14:03 wrapper_checkpoint.txt
[2025-07-26 14:04:05] -rw------- 1 boinc boinc      4667 26. Jul 14:04 pilotlog.txt
[2025-07-26 14:04:05] -rw------- 1 boinc boinc   1072774 26. Jul 14:04 log.45697472._005217.job.log.1
[2025-07-26 14:04:05] -rw------- 1 boinc boinc       357 26. Jul 14:04 output.list
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc       620 26. Jul 14:04 runtime_log
[2025-07-26 14:04:05] -rw------- 1 boinc boinc   1402880 26. Jul 14:04 result.tar.gz
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc      8621 26. Jul 14:04 runtime_log.err
[2025-07-26 14:04:05] -rw------- 1 boinc boinc       646 26. Jul 14:04 eh8NDmMvly7n9Rq4apOajLDm4fhM0noT9bVof3QYDm47vKDmtCJsqn.diag
[2025-07-26 14:04:05] -rw-r--r-- 1 boinc boinc     20568 26. Jul 14:04 stderr.txt
[2025-07-26 14:04:05] HITS file was successfully produced:
[2025-07-26 14:04:05] -rw------- 1 boinc boinc 277422903 26. Jul 14:03 shared/HITS.pool.root.1
[2025-07-26 14:04:05]  *** Contents of shared directory: ***
[2025-07-26 14:04:05] insgesamt 598760
[2025-07-26 14:04:05] -rw-r--r-- 2 boinc boinc 333725726 26. Jul 10:57 ATLAS.root_0
[2025-07-26 14:04:05] -rw-r--r-- 2 boinc boinc    542898 26. Jul 10:57 input.tar.gz
[2025-07-26 14:04:05] -rw-r--r-- 2 boinc boinc     15095 26. Jul 10:57 start_atlas.sh
[2025-07-26 14:04:05] -rw------- 1 boinc boinc 277422903 26. Jul 14:03 HITS.pool.root.1
[2025-07-26 14:04:05] -rw------- 1 boinc boinc   1402880 26. Jul 14:04 result.tar.gz
14:04:06 (2137989): run_atlas exited; CPU time 42747.952313
14:04:06 (2137989): called boinc_finish(0)

</stderr_txt>
]]>

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