| Name | XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n_0 |
| Workunit | 233762407 |
| Created | 24 Jul 2025, 7:49:49 UTC |
| Sent | 24 Jul 2025, 7:59:38 UTC |
| Report deadline | 1 Aug 2025, 7:59:38 UTC |
| Received | 26 Jul 2025, 0:55:32 UTC |
| Server state | Over |
| Outcome | Computation error |
| Client state | Compute error |
| Exit status | 195 (0x000000C3) EXIT_CHILD_FAILED |
| Computer ID | 10854769 |
| Run time | 4 hours 45 min 23 sec |
| CPU time | 15 hours 31 min 32 sec |
| Validate state | Invalid |
| Credit | 0.00 |
| Device peak FLOPS | 16.28 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 2.51 GB |
| Peak swap size | 34.51 GB |
| Peak disk usage | 858.82 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<message>
process exited with code 195 (0xc3, -61)</message>
<stderr_txt>
cdata/boinc/project/lhcathome
[2025-07-25 02:45:51] + export BOINC_APP=ATLAS
[2025-07-25 02:45:51] + BOINC_APP=ATLAS
[2025-07-25 02:45:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 02:45:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 02:45:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 02:45:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 02:45:51] + '[' -z 1 ']'
[2025-07-25 02:45:51] + '[' 1 == 1 ']'
[2025-07-25 02:45:51] + shift
[2025-07-25 02:45:51] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 02:45:51] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 02:45:51] + '[' 0 -ne 0 ']'
[2025-07-25 02:45:51] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-25 02:45:51] + '[' -f /etc/os-release ']'
[2025-07-25 02:45:51] +++ cat /etc/os-release
[2025-07-25 02:45:51] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-25 02:45:51] +++ NAME='CentOS Linux'
[2025-07-25 02:45:51] +++ VERSION='7 (Core)'
[2025-07-25 02:45:51] +++ ID=centos
[2025-07-25 02:45:51] +++ ID_LIKE='rhel fedora'
[2025-07-25 02:45:51] +++ VERSION_ID=7
[2025-07-25 02:45:51] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-25 02:45:51] +++ ANSI_COLOR='0;31'
[2025-07-25 02:45:51] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-25 02:45:51] +++ HOME_URL=https://www.centos.org/
[2025-07-25 02:45:51] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-25 02:45:51] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-25 02:45:51] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-25 02:45:51] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-25 02:45:51] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-25 02:45:51] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-25 02:45:51] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-25 02:45:51] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-25 02:45:51] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-25 02:45:51] + HOME=/scratch/boinc/var/slot8/slots/0
[2025-07-25 02:45:51] + export HOME
[2025-07-25 02:45:51] + cd /scratch/boinc/var/slot8/slots/0
[2025-07-25 02:45:51] + '[' '!' -z '' ']'
[2025-07-25 02:45:51] + '[' -z '' ']'
[2025-07-25 02:45:51] ++ /bin/hostname -f
[2025-07-25 02:45:51] + nodename=skurut31.grid.cesnet.cz
[2025-07-25 02:45:51] + echo nodename=skurut31.grid.cesnet.cz
[2025-07-25 02:45:51] + echo Processors=2
[2025-07-25 02:45:51] + echo Nodecount=1
[2025-07-25 02:45:51] + echo Benchmark=HEPSPEC:1.0
[2025-07-25 02:45:51] + executable=./runpilot2-wrapper.sh
[2025-07-25 02:45:51] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-25 02:45:51] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-25 02:45:51] ++ head -n 1
[2025-07-25 02:45:51] ++ tr -d '\0'
[2025-07-25 02:45:51] + line1='#!/bin/bash'
[2025-07-25 02:45:51] ++ echo '#!/bin/bash'
[2025-07-25 02:45:51] ++ sed -n 's/^#! *//p'
[2025-07-25 02:45:51] + shebang=/bin/bash
[2025-07-25 02:45:51] ++ echo /bin/bash
[2025-07-25 02:45:51] ++ awk '{print $1}'
[2025-07-25 02:45:51] + interpreter=/bin/bash
[2025-07-25 02:45:51] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-25 02:45:51] + '[' x/bin/bash = x ']'
[2025-07-25 02:45:51] + type /bin/bash
[2025-07-25 02:45:51] + '[' xgnutime = xgnutime ']'
[2025-07-25 02:45:51] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-25 02:45:51] + RESULT=2
[2025-07-25 02:45:51] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 02:45:51] ++ grep domain_name init_data.xml
[2025-07-25 02:45:51] ++ awk -F '>' '{print $2}'
[2025-07-25 02:45:51] ++ awk -F '<' '{print $1}'
[2025-07-25 02:45:51] ++ sed -e 's# #_#g'
[2025-07-25 02:45:51] + hostname=skurut31.grid.cesnet.cz
[2025-07-25 02:45:51] ++ grep user_name init_data.xml
[2025-07-25 02:45:51] ++ awk -F '>' '{print $2}'
[2025-07-25 02:45:51] ++ awk -F '<' '{print $1}'
[2025-07-25 02:45:51] ++ sed -e 's# #_#g'
[2025-07-25 02:45:51] + username=praguelcg2
[2025-07-25 02:45:51] + nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-25 02:45:51] + echo nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-25 02:45:51] + '[' -n 4 ']'
[2025-07-25 02:45:51] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 02:45:51] + echo exitcode=2
[2025-07-25 02:45:51] + runtimeenvironments=
[2025-07-25 02:45:51] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-25 02:45:51] + RTE_function_0 2
[2025-07-25 02:45:51] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 02:45:51] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 02:45:51] + export BOINC_APP=ATLAS
[2025-07-25 02:45:51] + BOINC_APP=ATLAS
[2025-07-25 02:45:51] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 02:45:51] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 02:45:51] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 02:45:51] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 02:45:51] + '[' -z 2 ']'
[2025-07-25 02:45:51] + '[' 2 == 1 ']'
[2025-07-25 02:45:51] + '[' 0 -ne 0 ']'
[2025-07-25 02:45:51] + echo 'zip all output files'
[2025-07-25 02:45:51] + flist='*.diag '
[2025-07-25 02:45:51] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 02:45:51] + '[' -e ./heartbeat.json ']'
[2025-07-25 02:45:51] + flist='*.diag ./heartbeat.json'
[2025-07-25 02:45:51] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 02:45:51] + '[' -e ./output.list ']'
[2025-07-25 02:45:51] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 02:45:51] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-25 02:45:51] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1'
[2025-07-25 02:45:51] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 02:45:51] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-25 02:45:51] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1'
[2025-07-25 02:45:51] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 02:45:51] + '[' -e ./gmlog/ ']'
[2025-07-25 02:45:51] + '[' -f output.list ']'
[2025-07-25 02:45:51] + tar cvf result.tar.gz XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1
[2025-07-25 02:45:51] + '[' xgnutime = xcgroup ']'
[2025-07-25 02:45:51] + '[' -n '' ']'
[2025-07-25 02:45:51] + '[' -n '' ']'
[2025-07-25 02:45:51] ++ date +%s
[2025-07-25 02:45:51] + ACCOUNTING_ENDTIME=1753404351
[2025-07-25 02:45:51] ++ date -d '1970-01-01 UTC 1753404163 seconds' +%Y%m%d%H%M%SZ
[2025-07-25 02:45:51] + echo LRMSStartTime=20250725024243Z
[2025-07-25 02:45:51] ++ date -d '1970-01-01 UTC 1753404351 seconds' +%Y%m%d%H%M%SZ
[2025-07-25 02:45:51] + echo LRMSEndTime=20250725024551Z
[2025-07-25 02:45:51] + echo walltime=188
[2025-07-25 02:45:51] + echo exitcode=2
[2025-07-25 02:45:51] + exit 2
[2025-07-25 02:45:51] ./runtime_log
[2025-07-25 02:45:51] ./log.45668900._001067.job.log.1
[2025-07-25 02:45:51] ./pilotlog.txt
[2025-07-25 02:45:51] ./runtime_log.err
[2025-07-25 02:45:51] ./PanDA_Pilot-6744423615/log.EVNTtoHITS
[2025-07-25 02:45:51] ./PanDA_Pilot-6744423615/PoolFileCatalog.xml
[2025-07-25 02:45:51] ./PanDA_Pilot-6744423615/prmon.log
[2025-07-25 02:45:51] ./PanDA_Pilot-6744423615/pilotlog.txt
[2025-07-25 02:45:51] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-25 02:45:51] ./pilot3/pilot/util/realtimelogger.py
[2025-07-25 02:45:51] ./pilot3/pilot/util/loggingsupport.py
[2025-07-25 02:45:51] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-25 02:45:51] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-25 02:45:51] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
03:19:50 (4011110): wrapper (7.7.26015): starting
03:19:50 (4011110): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 03:19:50] Arguments: --nthreads 4
[2025-07-25 03:19:50] Threads: 4
[2025-07-25 03:19:50] This job has been restarted, cleaning up previous attempt
[2025-07-25 03:19:50] Checking for CVMFS
[2025-07-25 03:19:50] No cvmfs_config command found, will try listing directly
[2025-07-25 03:19:50] CVMFS is ok
[2025-07-25 03:19:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 03:19:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 03:19:50] Further information can be found at the LHC@home message board.
[2025-07-25 03:19:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 03:19:50] Checking for apptainer binary...
[2025-07-25 03:19:50] which: no apptainer in ((null))
[2025-07-25 03:19:50] apptainer is not installed, using version from CVMFS
[2025-07-25 03:19:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 03:19:50] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-25 03:19:50] apptainer works
[2025-07-25 03:19:50] Set ATHENA_PROC_NUMBER=4
[2025-07-25 03:19:50] Set ATHENA_CORE_NUMBER=4
[2025-07-25 03:19:50] Starting ATLAS job with PandaID=6744423615
[2025-07-25 03:19:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
03:59:46 (4083291): wrapper (7.7.26015): starting
03:59:46 (4083291): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 03:59:46] Arguments: --nthreads 4
[2025-07-25 03:59:46] Threads: 4
[2025-07-25 03:59:46] This job has been restarted, cleaning up previous attempt
[2025-07-25 03:59:46] Checking for CVMFS
[2025-07-25 03:59:46] No cvmfs_config command found, will try listing directly
[2025-07-25 03:59:46] CVMFS is ok
[2025-07-25 03:59:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 03:59:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 03:59:46] Further information can be found at the LHC@home message board.
[2025-07-25 03:59:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 03:59:46] Checking for apptainer binary...
[2025-07-25 03:59:46] which: no apptainer in ((null))
[2025-07-25 03:59:46] apptainer is not installed, using version from CVMFS
[2025-07-25 03:59:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 03:59:46] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-25 03:59:46] apptainer works
[2025-07-25 03:59:46] Set ATHENA_PROC_NUMBER=4
[2025-07-25 03:59:46] Set ATHENA_CORE_NUMBER=4
[2025-07-25 03:59:46] Starting ATLAS job with PandaID=6744423615
[2025-07-25 03:59:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:12:03 (4181633): wrapper (7.7.26015): starting
05:12:03 (4181633): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 05:12:03] Arguments: --nthreads 4
[2025-07-25 05:12:03] Threads: 4
[2025-07-25 05:12:03] This job has been restarted, cleaning up previous attempt
[2025-07-25 05:12:03] Checking for CVMFS
[2025-07-25 05:12:03] No cvmfs_config command found, will try listing directly
[2025-07-25 05:12:03] CVMFS is ok
[2025-07-25 05:12:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 05:12:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 05:12:03] Further information can be found at the LHC@home message board.
[2025-07-25 05:12:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 05:12:03] Checking for apptainer binary...
[2025-07-25 05:12:03] which: no apptainer in ((null))
[2025-07-25 05:12:03] apptainer is not installed, using version from CVMFS
[2025-07-25 05:12:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 05:12:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-25 05:12:03] apptainer works
[2025-07-25 05:12:03] Set ATHENA_PROC_NUMBER=4
[2025-07-25 05:12:03] Set ATHENA_CORE_NUMBER=4
[2025-07-25 05:12:04] Starting ATLAS job with PandaID=6744423615
[2025-07-25 05:12:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:05:48 (158830): wrapper (7.7.26015): starting
07:05:48 (158830): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 07:05:48] Arguments: --nthreads 4
[2025-07-25 07:05:48] Threads: 4
[2025-07-25 07:05:48] This job has been restarted, cleaning up previous attempt
[2025-07-25 07:05:48] Checking for CVMFS
[2025-07-25 07:05:48] No cvmfs_config command found, will try listing directly
[2025-07-25 07:05:48] CVMFS is ok
[2025-07-25 07:05:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 07:05:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 07:05:48] Further information can be found at the LHC@home message board.
[2025-07-25 07:05:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 07:05:48] Checking for apptainer binary...
[2025-07-25 07:05:48] which: no apptainer in ((null))
[2025-07-25 07:05:48] apptainer is not installed, using version from CVMFS
[2025-07-25 07:05:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 07:05:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-25 07:05:48] apptainer works
[2025-07-25 07:05:48] Set ATHENA_PROC_NUMBER=4
[2025-07-25 07:05:48] Set ATHENA_CORE_NUMBER=4
[2025-07-25 07:05:48] Starting ATLAS job with PandaID=6744423615
[2025-07-25 07:05:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 07:08:54] Job failed
[2025-07-25 07:08:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-25 07:08:54] ++ pwd
[2025-07-25 07:08:54] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 07:08:54] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 07:08:54] + mv ATLAS.root_0 EVNT.45668898._000043.pool.root.1
[2025-07-25 07:08:54] mv: 'ATLAS.root_0' and 'EVNT.45668898._000043.pool.root.1' are the same file
[2025-07-25 07:08:54] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-25 07:08:54] + umask 077
[2025-07-25 07:08:54] ++ date +%s
[2025-07-25 07:08:54] + ACCOUNTING_STARTTIME=1753419948
[2025-07-25 07:08:54] + echo 'Detecting resource accounting method available for the job.'
[2025-07-25 07:08:54] Detecting resource accounting method available for the job.
[2025-07-25 07:08:54] + JOB_ACCOUNTING=
[2025-07-25 07:08:54] + command -v arc-job-cgroup
[2025-07-25 07:08:54] + '[' -z '' ']'
[2025-07-25 07:08:54] + GNU_TIME=/usr/bin/time
[2025-07-25 07:08:54] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-25 07:08:54] Looking for /usr/bin/time tool for accounting measurements
[2025-07-25 07:08:54] + '[' '!' -z /usr/bin/time ']'
[2025-07-25 07:08:54] + /usr/bin/time --version
[2025-07-25 07:08:54] + echo 'GNU time found and will be used for job accounting.'
[2025-07-25 07:08:54] GNU time found and will be used for job accounting.
[2025-07-25 07:08:54] + JOB_ACCOUNTING=gnutime
[2025-07-25 07:08:54] + '[' -z gnutime ']'
[2025-07-25 07:08:54] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-25 07:08:54] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-25 07:08:54] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-24/BOINC_MCORE/6744423615.out
[2025-07-25 07:08:54] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-24/BOINC_MCORE/6744423615.out
[2025-07-25 07:08:54] + export PILOT_NOKILL=YES
[2025-07-25 07:08:54] + PILOT_NOKILL=YES
[2025-07-25 07:08:54] + export GRID_GLOBAL_JOBID=XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 07:08:54] + GRID_GLOBAL_JOBID=XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 07:08:54] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 07:08:54] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 07:08:54] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-25 07:08:54] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-25 07:08:54] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-25 07:08:54] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-25 07:08:54] ++ pwd
[2025-07-25 07:08:54] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/0
[2025-07-25 07:08:54] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-25 07:08:54] ++ pwd
[2025-07-25 07:08:54] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/0/log.45668900._001067.job.log.1
[2025-07-25 07:08:54] ++ pwd
[2025-07-25 07:08:54] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/0/log.45668900._001067.job.log.1
[2025-07-25 07:08:54] ++ pwd
[2025-07-25 07:08:54] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/0.diag
[2025-07-25 07:08:54] + '[' '!' -z '' ']'
[2025-07-25 07:08:54] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-25 07:08:54] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-25 07:08:54] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-25 07:08:54] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-25 07:08:54] + '[' '!' -z '' ']'
[2025-07-25 07:08:54] + '[' -z yes ']'
[2025-07-25 07:08:54] ++ pwd
[2025-07-25 07:08:54] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 07:08:54] + runtimeenvironments=
[2025-07-25 07:08:54] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-25 07:08:54] + RTE_function_0 1
[2025-07-25 07:08:54] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 07:08:54] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 07:08:54] + export BOINC_APP=ATLAS
[2025-07-25 07:08:54] + BOINC_APP=ATLAS
[2025-07-25 07:08:54] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 07:08:54] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 07:08:54] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 07:08:54] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 07:08:54] + '[' -z 1 ']'
[2025-07-25 07:08:54] + '[' 1 == 1 ']'
[2025-07-25 07:08:54] + shift
[2025-07-25 07:08:54] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 07:08:54] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 07:08:54] + '[' 0 -ne 0 ']'
[2025-07-25 07:08:54] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-25 07:08:54] + '[' -f /etc/os-release ']'
[2025-07-25 07:08:54] +++ cat /etc/os-release
[2025-07-25 07:08:54] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-25 07:08:54] +++ NAME='CentOS Linux'
[2025-07-25 07:08:54] +++ VERSION='7 (Core)'
[2025-07-25 07:08:54] +++ ID=centos
[2025-07-25 07:08:54] +++ ID_LIKE='rhel fedora'
[2025-07-25 07:08:54] +++ VERSION_ID=7
[2025-07-25 07:08:54] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-25 07:08:54] +++ ANSI_COLOR='0;31'
[2025-07-25 07:08:54] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-25 07:08:54] +++ HOME_URL=https://www.centos.org/
[2025-07-25 07:08:54] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-25 07:08:54] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-25 07:08:54] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-25 07:08:54] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-25 07:08:54] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-25 07:08:54] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-25 07:08:54] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-25 07:08:54] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-25 07:08:54] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-25 07:08:54] + HOME=/scratch/boinc/var/slot8/slots/0
[2025-07-25 07:08:54] + export HOME
[2025-07-25 07:08:54] + cd /scratch/boinc/var/slot8/slots/0
[2025-07-25 07:08:54] + '[' '!' -z '' ']'
[2025-07-25 07:08:54] + '[' -z '' ']'
[2025-07-25 07:08:54] ++ /bin/hostname -f
[2025-07-25 07:08:54] + nodename=skurut31.grid.cesnet.cz
[2025-07-25 07:08:54] + echo nodename=skurut31.grid.cesnet.cz
[2025-07-25 07:08:54] + echo Processors=2
[2025-07-25 07:08:54] + echo Nodecount=1
[2025-07-25 07:08:54] + echo Benchmark=HEPSPEC:1.0
[2025-07-25 07:08:54] + executable=./runpilot2-wrapper.sh
[2025-07-25 07:08:54] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-25 07:08:54] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-25 07:08:54] ++ head -n 1
[2025-07-25 07:08:54] ++ tr -d '\0'
[2025-07-25 07:08:54] + line1='#!/bin/bash'
[2025-07-25 07:08:54] ++ echo '#!/bin/bash'
[2025-07-25 07:08:54] ++ sed -n 's/^#! *//p'
[2025-07-25 07:08:54] + shebang=/bin/bash
[2025-07-25 07:08:54] ++ echo /bin/bash
[2025-07-25 07:08:54] ++ awk '{print $1}'
[2025-07-25 07:08:54] + interpreter=/bin/bash
[2025-07-25 07:08:54] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-25 07:08:54] + '[' x/bin/bash = x ']'
[2025-07-25 07:08:54] + type /bin/bash
[2025-07-25 07:08:54] + '[' xgnutime = xgnutime ']'
[2025-07-25 07:08:54] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-25 07:08:54] + RESULT=2
[2025-07-25 07:08:54] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 07:08:54] ++ grep domain_name init_data.xml
[2025-07-25 07:08:54] ++ awk -F '>' '{print $2}'
[2025-07-25 07:08:54] ++ awk -F '<' '{print $1}'
[2025-07-25 07:08:54] ++ sed -e 's# #_#g'
[2025-07-25 07:08:54] + hostname=skurut31.grid.cesnet.cz
[2025-07-25 07:08:54] ++ grep user_name init_data.xml
[2025-07-25 07:08:54] ++ awk -F '>' '{print $2}'
[2025-07-25 07:08:54] ++ sed -e 's# #_#g'
[2025-07-25 07:08:54] ++ awk -F '<' '{print $1}'
[2025-07-25 07:08:54] + username=praguelcg2
[2025-07-25 07:08:54] + nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-25 07:08:54] + echo nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-25 07:08:54] + '[' -n 4 ']'
[2025-07-25 07:08:54] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 07:08:54] + echo exitcode=2
[2025-07-25 07:08:54] + runtimeenvironments=
[2025-07-25 07:08:54] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-25 07:08:54] + RTE_function_0 2
[2025-07-25 07:08:54] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 07:08:54] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 07:08:54] + export BOINC_APP=ATLAS
[2025-07-25 07:08:54] + BOINC_APP=ATLAS
[2025-07-25 07:08:54] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 07:08:54] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 07:08:54] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 07:08:54] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 07:08:54] + '[' -z 2 ']'
[2025-07-25 07:08:54] + '[' 2 == 1 ']'
[2025-07-25 07:08:54] + '[' 0 -ne 0 ']'
[2025-07-25 07:08:54] + echo 'zip all output files'
[2025-07-25 07:08:54] + flist='*.diag '
[2025-07-25 07:08:54] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 07:08:54] + '[' -e ./heartbeat.json ']'
[2025-07-25 07:08:54] + flist='*.diag ./heartbeat.json'
[2025-07-25 07:08:54] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 07:08:54] + '[' -e ./output.list ']'
[2025-07-25 07:08:54] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 07:08:54] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-25 07:08:54] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1'
[2025-07-25 07:08:54] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 07:08:54] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-25 07:08:54] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1'
[2025-07-25 07:08:54] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 07:08:54] + '[' -e ./gmlog/ ']'
[2025-07-25 07:08:54] + '[' -f output.list ']'
[2025-07-25 07:08:54] + tar cvf result.tar.gz XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1
[2025-07-25 07:08:54] + '[' xgnutime = xcgroup ']'
[2025-07-25 07:08:54] + '[' -n '' ']'
[2025-07-25 07:08:54] + '[' -n '' ']'
[2025-07-25 07:08:54] ++ date +%s
[2025-07-25 07:08:54] + ACCOUNTING_ENDTIME=1753420134
[2025-07-25 07:08:54] ++ date -d '1970-01-01 UTC 1753419948 seconds' +%Y%m%d%H%M%SZ
[2025-07-25 07:08:54] + echo LRMSStartTime=20250725070548Z
[2025-07-25 07:08:54] ++ date -d '1970-01-01 UTC 1753420134 seconds' +%Y%m%d%H%M%SZ
[2025-07-25 07:08:54] + echo LRMSEndTime=20250725070854Z
[2025-07-25 07:08:54] + echo walltime=186
[2025-07-25 07:08:54] + echo exitcode=2
[2025-07-25 07:08:54] + exit 2
[2025-07-25 07:08:54] ./runtime_log
[2025-07-25 07:08:54] ./log.45668900._001067.job.log.1
[2025-07-25 07:08:54] ./pilotlog.txt
[2025-07-25 07:08:54] ./runtime_log.err
[2025-07-25 07:08:54] ./PanDA_Pilot-6744423615/log.EVNTtoHITS
[2025-07-25 07:08:54] ./PanDA_Pilot-6744423615/PoolFileCatalog.xml
[2025-07-25 07:08:54] ./PanDA_Pilot-6744423615/prmon.log
[2025-07-25 07:08:54] ./PanDA_Pilot-6744423615/pilotlog.txt
[2025-07-25 07:08:54] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-25 07:08:54] ./pilot3/pilot/util/realtimelogger.py
[2025-07-25 07:08:54] ./pilot3/pilot/util/loggingsupport.py
[2025-07-25 07:08:54] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-25 07:08:54] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-25 07:08:54] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
07:52:41 (276820): wrapper (7.7.26015): starting
07:52:41 (276820): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 07:52:41] Arguments: --nthreads 4
[2025-07-25 07:52:41] Threads: 4
[2025-07-25 07:52:41] This job has been restarted, cleaning up previous attempt
[2025-07-25 07:52:41] Checking for CVMFS
[2025-07-25 07:52:41] No cvmfs_config command found, will try listing directly
[2025-07-25 07:52:41] CVMFS is ok
[2025-07-25 07:52:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 07:52:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 07:52:41] Further information can be found at the LHC@home message board.
[2025-07-25 07:52:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 07:52:41] Checking for apptainer binary...
[2025-07-25 07:52:41] which: no apptainer in ((null))
[2025-07-25 07:52:41] apptainer is not installed, using version from CVMFS
[2025-07-25 07:52:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 07:52:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-25 07:52:42] apptainer works
[2025-07-25 07:52:42] Set ATHENA_PROC_NUMBER=4
[2025-07-25 07:52:42] Set ATHENA_CORE_NUMBER=4
[2025-07-25 07:52:42] Starting ATLAS job with PandaID=6744423615
[2025-07-25 07:52:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
20:53:40 (1264196): wrapper (7.7.26015): starting
20:53:40 (1264196): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 20:53:40] Arguments: --nthreads 4
[2025-07-25 20:53:40] Threads: 4
[2025-07-25 20:53:40] This job has been restarted, cleaning up previous attempt
[2025-07-25 20:53:40] Checking for CVMFS
[2025-07-25 20:53:40] No cvmfs_config command found, will try listing directly
[2025-07-25 20:53:40] CVMFS is ok
[2025-07-25 20:53:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 20:53:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 20:53:40] Further information can be found at the LHC@home message board.
[2025-07-25 20:53:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 20:53:40] Checking for apptainer binary...
[2025-07-25 20:53:40] which: no apptainer in ((null))
[2025-07-25 20:53:40] apptainer is not installed, using version from CVMFS
[2025-07-25 20:53:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 20:53:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-25 20:53:40] apptainer works
[2025-07-25 20:53:40] Set ATHENA_PROC_NUMBER=4
[2025-07-25 20:53:40] Set ATHENA_CORE_NUMBER=4
[2025-07-25 20:53:40] Starting ATLAS job with PandaID=6744423615
[2025-07-25 20:53:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 20:57:21] Job failed
[2025-07-25 20:57:21] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-25 20:57:21] ++ pwd
[2025-07-25 20:57:21] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 20:57:21] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 20:57:21] + mv ATLAS.root_0 EVNT.45668898._000043.pool.root.1
[2025-07-25 20:57:21] mv: 'ATLAS.root_0' and 'EVNT.45668898._000043.pool.root.1' are the same file
[2025-07-25 20:57:21] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-25 20:57:21] + umask 077
[2025-07-25 20:57:21] ++ date +%s
[2025-07-25 20:57:21] + ACCOUNTING_STARTTIME=1753469620
[2025-07-25 20:57:21] + echo 'Detecting resource accounting method available for the job.'
[2025-07-25 20:57:21] Detecting resource accounting method available for the job.
[2025-07-25 20:57:21] + JOB_ACCOUNTING=
[2025-07-25 20:57:21] + command -v arc-job-cgroup
[2025-07-25 20:57:21] + '[' -z '' ']'
[2025-07-25 20:57:21] + GNU_TIME=/usr/bin/time
[2025-07-25 20:57:21] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-25 20:57:21] Looking for /usr/bin/time tool for accounting measurements
[2025-07-25 20:57:21] + '[' '!' -z /usr/bin/time ']'
[2025-07-25 20:57:21] + /usr/bin/time --version
[2025-07-25 20:57:21] + echo 'GNU time found and will be used for job accounting.'
[2025-07-25 20:57:21] GNU time found and will be used for job accounting.
[2025-07-25 20:57:21] + JOB_ACCOUNTING=gnutime
[2025-07-25 20:57:21] + '[' -z gnutime ']'
[2025-07-25 20:57:21] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-25 20:57:21] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-25 20:57:21] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-24/BOINC_MCORE/6744423615.out
[2025-07-25 20:57:21] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-24/BOINC_MCORE/6744423615.out
[2025-07-25 20:57:21] + export PILOT_NOKILL=YES
[2025-07-25 20:57:21] + PILOT_NOKILL=YES
[2025-07-25 20:57:21] + export GRID_GLOBAL_JOBID=XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 20:57:21] + GRID_GLOBAL_JOBID=XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 20:57:21] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 20:57:21] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-25 20:57:21] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-25 20:57:21] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-25 20:57:21] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-25 20:57:21] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-25 20:57:21] ++ pwd
[2025-07-25 20:57:21] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/0
[2025-07-25 20:57:21] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-25 20:57:21] ++ pwd
[2025-07-25 20:57:21] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/0/log.45668900._001067.job.log.1
[2025-07-25 20:57:21] ++ pwd
[2025-07-25 20:57:21] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/0/log.45668900._001067.job.log.1
[2025-07-25 20:57:21] ++ pwd
[2025-07-25 20:57:21] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/0.diag
[2025-07-25 20:57:21] + '[' '!' -z '' ']'
[2025-07-25 20:57:21] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-25 20:57:21] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-25 20:57:21] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-25 20:57:21] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-25 20:57:21] + '[' '!' -z '' ']'
[2025-07-25 20:57:21] + '[' -z yes ']'
[2025-07-25 20:57:21] ++ pwd
[2025-07-25 20:57:21] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 20:57:21] + runtimeenvironments=
[2025-07-25 20:57:21] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-25 20:57:21] + RTE_function_0 1
[2025-07-25 20:57:21] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 20:57:21] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 20:57:21] + export BOINC_APP=ATLAS
[2025-07-25 20:57:21] + BOINC_APP=ATLAS
[2025-07-25 20:57:21] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 20:57:21] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 20:57:21] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 20:57:21] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 20:57:21] + '[' -z 1 ']'
[2025-07-25 20:57:21] + '[' 1 == 1 ']'
[2025-07-25 20:57:21] + shift
[2025-07-25 20:57:21] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 20:57:21] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-25 20:57:21] + '[' 0 -ne 0 ']'
[2025-07-25 20:57:21] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-25 20:57:21] + '[' -f /etc/os-release ']'
[2025-07-25 20:57:21] +++ cat /etc/os-release
[2025-07-25 20:57:21] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-25 20:57:21] +++ NAME='CentOS Linux'
[2025-07-25 20:57:21] +++ VERSION='7 (Core)'
[2025-07-25 20:57:21] +++ ID=centos
[2025-07-25 20:57:21] +++ ID_LIKE='rhel fedora'
[2025-07-25 20:57:21] +++ VERSION_ID=7
[2025-07-25 20:57:21] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-25 20:57:21] +++ ANSI_COLOR='0;31'
[2025-07-25 20:57:21] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-25 20:57:21] +++ HOME_URL=https://www.centos.org/
[2025-07-25 20:57:21] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-25 20:57:21] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-25 20:57:21] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-25 20:57:21] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-25 20:57:21] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-25 20:57:21] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-25 20:57:21] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-25 20:57:21] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-25 20:57:21] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-25 20:57:21] + HOME=/scratch/boinc/var/slot8/slots/0
[2025-07-25 20:57:21] + export HOME
[2025-07-25 20:57:21] + cd /scratch/boinc/var/slot8/slots/0
[2025-07-25 20:57:21] + '[' '!' -z '' ']'
[2025-07-25 20:57:21] + '[' -z '' ']'
[2025-07-25 20:57:21] ++ /bin/hostname -f
[2025-07-25 20:57:21] + nodename=skurut31.grid.cesnet.cz
[2025-07-25 20:57:21] + echo nodename=skurut31.grid.cesnet.cz
[2025-07-25 20:57:21] + echo Processors=2
[2025-07-25 20:57:21] + echo Nodecount=1
[2025-07-25 20:57:21] + echo Benchmark=HEPSPEC:1.0
[2025-07-25 20:57:21] + executable=./runpilot2-wrapper.sh
[2025-07-25 20:57:21] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-25 20:57:21] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-25 20:57:21] ++ head -n 1
[2025-07-25 20:57:21] ++ tr -d '\0'
[2025-07-25 20:57:21] + line1='#!/bin/bash'
[2025-07-25 20:57:21] ++ echo '#!/bin/bash'
[2025-07-25 20:57:21] ++ sed -n 's/^#! *//p'
[2025-07-25 20:57:21] + shebang=/bin/bash
[2025-07-25 20:57:21] ++ echo /bin/bash
[2025-07-25 20:57:21] ++ awk '{print $1}'
[2025-07-25 20:57:21] + interpreter=/bin/bash
[2025-07-25 20:57:21] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-25 20:57:21] + '[' x/bin/bash = x ']'
[2025-07-25 20:57:21] + type /bin/bash
[2025-07-25 20:57:21] + '[' xgnutime = xgnutime ']'
[2025-07-25 20:57:21] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-25 20:57:21] + RESULT=2
[2025-07-25 20:57:21] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 20:57:21] ++ grep domain_name init_data.xml
[2025-07-25 20:57:21] ++ awk -F '>' '{print $2}'
[2025-07-25 20:57:21] ++ awk -F '<' '{print $1}'
[2025-07-25 20:57:21] ++ sed -e 's# #_#g'
[2025-07-25 20:57:21] + hostname=skurut31.grid.cesnet.cz
[2025-07-25 20:57:21] ++ grep user_name init_data.xml
[2025-07-25 20:57:21] ++ awk -F '>' '{print $2}'
[2025-07-25 20:57:21] ++ awk -F '<' '{print $1}'
[2025-07-25 20:57:21] ++ sed -e 's# #_#g'
[2025-07-25 20:57:21] + username=praguelcg2
[2025-07-25 20:57:21] + nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-25 20:57:21] + echo nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-25 20:57:21] + '[' -n 4 ']'
[2025-07-25 20:57:21] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-25 20:57:21] + echo exitcode=2
[2025-07-25 20:57:21] + runtimeenvironments=
[2025-07-25 20:57:21] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-25 20:57:21] + RTE_function_0 2
[2025-07-25 20:57:21] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 20:57:21] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-25 20:57:21] + export BOINC_APP=ATLAS
[2025-07-25 20:57:21] + BOINC_APP=ATLAS
[2025-07-25 20:57:21] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 20:57:21] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-25 20:57:21] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 20:57:21] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-25 20:57:21] + '[' -z 2 ']'
[2025-07-25 20:57:21] + '[' 2 == 1 ']'
[2025-07-25 20:57:21] + '[' 0 -ne 0 ']'
[2025-07-25 20:57:21] + echo 'zip all output files'
[2025-07-25 20:57:21] + flist='*.diag '
[2025-07-25 20:57:21] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 20:57:21] + '[' -e ./heartbeat.json ']'
[2025-07-25 20:57:21] + flist='*.diag ./heartbeat.json'
[2025-07-25 20:57:21] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 20:57:21] + '[' -e ./output.list ']'
[2025-07-25 20:57:21] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 20:57:21] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-25 20:57:21] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1'
[2025-07-25 20:57:21] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 20:57:21] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-25 20:57:21] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1'
[2025-07-25 20:57:21] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-25 20:57:21] + '[' -e ./gmlog/ ']'
[2025-07-25 20:57:21] + '[' -f output.list ']'
[2025-07-25 20:57:21] + tar cvf result.tar.gz XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1
[2025-07-25 20:57:21] + '[' xgnutime = xcgroup ']'
[2025-07-25 20:57:21] + '[' -n '' ']'
[2025-07-25 20:57:21] + '[' -n '' ']'
[2025-07-25 20:57:21] ++ date +%s
[2025-07-25 20:57:21] + ACCOUNTING_ENDTIME=1753469809
[2025-07-25 20:57:21] ++ date -d '1970-01-01 UTC 1753469620 seconds' +%Y%m%d%H%M%SZ
[2025-07-25 20:57:21] + echo LRMSStartTime=20250725205340Z
[2025-07-25 20:57:21] ++ date -d '1970-01-01 UTC 1753469809 seconds' +%Y%m%d%H%M%SZ
[2025-07-25 20:57:21] + echo LRMSEndTime=20250725205649Z
[2025-07-25 20:57:21] + echo walltime=189
[2025-07-25 20:57:21] + echo exitcode=2
[2025-07-25 20:57:21] + exit 2
[2025-07-25 20:57:21] ./runtime_log
[2025-07-25 20:57:21] ./log.45668900._001067.job.log.1
[2025-07-25 20:57:21] ./pilotlog.txt
[2025-07-25 20:57:21] ./runtime_log.err
[2025-07-25 20:57:21] ./PanDA_Pilot-6744423615/log.EVNTtoHITS
[2025-07-25 20:57:21] ./PanDA_Pilot-6744423615/PoolFileCatalog.xml
[2025-07-25 20:57:21] ./PanDA_Pilot-6744423615/prmon.log
[2025-07-25 20:57:21] ./PanDA_Pilot-6744423615/pilotlog.txt
[2025-07-25 20:57:21] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-25 20:57:21] ./pilot3/pilot/util/realtimelogger.py
[2025-07-25 20:57:21] ./pilot3/pilot/util/loggingsupport.py
[2025-07-25 20:57:21] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-25 20:57:21] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-25 20:57:21] ./pilot3/pilot/util/__pycache__/realtimelogger.cpython-39.pyc
21:28:09 (1329228): wrapper (7.7.26015): starting
21:28:09 (1329228): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 21:28:09] Arguments: --nthreads 4
[2025-07-25 21:28:09] Threads: 4
[2025-07-25 21:28:09] This job has been restarted, cleaning up previous attempt
[2025-07-25 21:28:09] Checking for CVMFS
[2025-07-25 21:28:09] No cvmfs_config command found, will try listing directly
[2025-07-25 21:28:09] CVMFS is ok
[2025-07-25 21:28:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 21:28:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 21:28:09] Further information can be found at the LHC@home message board.
[2025-07-25 21:28:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 21:28:09] Checking for apptainer binary...
[2025-07-25 21:28:09] which: no apptainer in ((null))
[2025-07-25 21:28:09] apptainer is not installed, using version from CVMFS
[2025-07-25 21:28:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 21:28:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-25 21:28:09] apptainer works
[2025-07-25 21:28:09] Set ATHENA_PROC_NUMBER=4
[2025-07-25 21:28:09] Set ATHENA_CORE_NUMBER=4
[2025-07-25 21:28:09] Starting ATLAS job with PandaID=6744423615
[2025-07-25 21:28:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:29:02 (1827059): wrapper (7.7.26015): starting
02:29:02 (1827059): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 02:29:02] Arguments: --nthreads 4
[2025-07-26 02:29:02] Threads: 4
[2025-07-26 02:29:02] This job has been restarted, cleaning up previous attempt
[2025-07-26 02:29:02] Checking for CVMFS
[2025-07-26 02:29:02] No cvmfs_config command found, will try listing directly
[2025-07-26 02:29:02] CVMFS is ok
[2025-07-26 02:29:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 02:29:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 02:29:02] Further information can be found at the LHC@home message board.
[2025-07-26 02:29:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 02:29:02] Checking for apptainer binary...
[2025-07-26 02:29:02] which: no apptainer in ((null))
[2025-07-26 02:29:02] apptainer is not installed, using version from CVMFS
[2025-07-26 02:29:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 02:29:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut31.grid.cesnet.cz
[2025-07-26 02:29:02] apptainer works
[2025-07-26 02:29:02] Set ATHENA_PROC_NUMBER=4
[2025-07-26 02:29:02] Set ATHENA_CORE_NUMBER=4
[2025-07-26 02:29:02] Starting ATLAS job with PandaID=6744423615
[2025-07-26 02:29:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot8/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 02:32:11] Job failed
[2025-07-26 02:32:11] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot8/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment
[2025-07-26 02:32:11] ++ pwd
[2025-07-26 02:32:11] + export RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/0/
[2025-07-26 02:32:11] + RUNTIME_CONFIG_DIR=/scratch/boinc/var/slot8/slots/0/
[2025-07-26 02:32:11] + mv ATLAS.root_0 EVNT.45668898._000043.pool.root.1
[2025-07-26 02:32:11] mv: 'ATLAS.root_0' and 'EVNT.45668898._000043.pool.root.1' are the same file
[2025-07-26 02:32:11] + tar --strip-components=5 -xvf input.tar.gz
[2025-07-26 02:32:11] + umask 077
[2025-07-26 02:32:11] ++ date +%s
[2025-07-26 02:32:11] + ACCOUNTING_STARTTIME=1753489743
[2025-07-26 02:32:11] + echo 'Detecting resource accounting method available for the job.'
[2025-07-26 02:32:11] Detecting resource accounting method available for the job.
[2025-07-26 02:32:11] + JOB_ACCOUNTING=
[2025-07-26 02:32:11] + command -v arc-job-cgroup
[2025-07-26 02:32:11] + '[' -z '' ']'
[2025-07-26 02:32:11] + GNU_TIME=/usr/bin/time
[2025-07-26 02:32:11] + echo 'Looking for /usr/bin/time tool for accounting measurements'
[2025-07-26 02:32:11] Looking for /usr/bin/time tool for accounting measurements
[2025-07-26 02:32:11] + '[' '!' -z /usr/bin/time ']'
[2025-07-26 02:32:11] + /usr/bin/time --version
[2025-07-26 02:32:11] + echo 'GNU time found and will be used for job accounting.'
[2025-07-26 02:32:11] GNU time found and will be used for job accounting.
[2025-07-26 02:32:11] + JOB_ACCOUNTING=gnutime
[2025-07-26 02:32:11] + '[' -z gnutime ']'
[2025-07-26 02:32:11] + export PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-26 02:32:11] + PANDA_JSID=harvester-CERN_central_ACTA
[2025-07-26 02:32:11] + export GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-24/BOINC_MCORE/6744423615.out
[2025-07-26 02:32:11] + GTAG=http://aipanda403.cern.ch/data/jobs/2025-07-24/BOINC_MCORE/6744423615.out
[2025-07-26 02:32:11] + export PILOT_NOKILL=YES
[2025-07-26 02:32:11] + PILOT_NOKILL=YES
[2025-07-26 02:32:11] + export GRID_GLOBAL_JOBID=XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-26 02:32:11] + GRID_GLOBAL_JOBID=XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-26 02:32:11] + export GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-26 02:32:11] + GRID_GLOBAL_JOBURL=https://arc-boinc-01.cern.ch:443/arex/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n
[2025-07-26 02:32:11] + export GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-26 02:32:11] + GRID_GLOBAL_JOBINTERFACE=org.nordugrid.arcrest
[2025-07-26 02:32:11] + export GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-26 02:32:11] + GRID_GLOBAL_JOBHOST=arc-boinc-01.cern.ch
[2025-07-26 02:32:11] ++ pwd
[2025-07-26 02:32:11] + RUNTIME_JOB_DIR=/scratch/boinc/var/slot8/slots/0
[2025-07-26 02:32:11] + RUNTIME_JOB_STDIN=/dev/null
[2025-07-26 02:32:11] ++ pwd
[2025-07-26 02:32:11] + RUNTIME_JOB_STDOUT=/scratch/boinc/var/slot8/slots/0/log.45668900._001067.job.log.1
[2025-07-26 02:32:11] ++ pwd
[2025-07-26 02:32:11] + RUNTIME_JOB_STDERR=/scratch/boinc/var/slot8/slots/0/log.45668900._001067.job.log.1
[2025-07-26 02:32:11] ++ pwd
[2025-07-26 02:32:11] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/0.diag
[2025-07-26 02:32:11] + '[' '!' -z '' ']'
[2025-07-26 02:32:11] + RUNTIME_LOCAL_SCRATCH_DIR=
[2025-07-26 02:32:11] + RUNTIME_LOCAL_SCRATCH_MOVE_TOOL=mv
[2025-07-26 02:32:11] + RUNTIME_FRONTEND_SEES_NODE=
[2025-07-26 02:32:11] + RUNTIME_NODE_SEES_FRONTEND=yes
[2025-07-26 02:32:11] + '[' '!' -z '' ']'
[2025-07-26 02:32:11] + '[' -z yes ']'
[2025-07-26 02:32:11] ++ pwd
[2025-07-26 02:32:11] + RUNTIME_JOB_DIAG=/scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-26 02:32:11] + runtimeenvironments=
[2025-07-26 02:32:11] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-26 02:32:11] + RTE_function_0 1
[2025-07-26 02:32:11] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-26 02:32:11] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-26 02:32:11] + export BOINC_APP=ATLAS
[2025-07-26 02:32:11] + BOINC_APP=ATLAS
[2025-07-26 02:32:11] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-26 02:32:11] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-26 02:32:11] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-26 02:32:11] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-26 02:32:11] + '[' -z 1 ']'
[2025-07-26 02:32:11] + '[' 1 == 1 ']'
[2025-07-26 02:32:11] + shift
[2025-07-26 02:32:11] + export ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-26 02:32:11] + ATLAS_LOCAL_AREA=/scratch/boinc/var/slot8/slots/0/
[2025-07-26 02:32:11] + '[' 0 -ne 0 ']'
[2025-07-26 02:32:11] + echo 'runtimeenvironments=APPS/HEP/ATLAS-SITE;'
[2025-07-26 02:32:11] + '[' -f /etc/os-release ']'
[2025-07-26 02:32:11] +++ cat /etc/os-release
[2025-07-26 02:32:11] ++ eval 'NAME="CentOS' 'Linux"' 'VERSION="7' '(Core)"' 'ID="centos"' 'ID_LIKE="rhel' 'fedora"' 'VERSION_ID="7"' 'PRETTY_NAME="CentOS' Linux 7 '(Core)"' 'ANSI_COLOR="0;31"' 'CPE_NAME="cpe:/o:centos:centos:7"' 'HOME_URL="https://www.centos.org/"' 'BUG_REPORT_URL="https://bugs.centos.org/"' 'CENTOS_MANTISBT_PROJECT="CentOS-7"' 'CENTOS_MANTISBT_PROJECT_VERSION="7"' 'REDHAT_SUPPORT_PRODUCT="centos"' 'REDHAT_SUPPORT_PRODUCT_VERSION="7"'
[2025-07-26 02:32:11] +++ NAME='CentOS Linux'
[2025-07-26 02:32:11] +++ VERSION='7 (Core)'
[2025-07-26 02:32:11] +++ ID=centos
[2025-07-26 02:32:11] +++ ID_LIKE='rhel fedora'
[2025-07-26 02:32:11] +++ VERSION_ID=7
[2025-07-26 02:32:11] +++ PRETTY_NAME='CentOS Linux 7 (Core)'
[2025-07-26 02:32:11] +++ ANSI_COLOR='0;31'
[2025-07-26 02:32:11] +++ CPE_NAME=cpe:/o:centos:centos:7
[2025-07-26 02:32:11] +++ HOME_URL=https://www.centos.org/
[2025-07-26 02:32:11] +++ BUG_REPORT_URL=https://bugs.centos.org/
[2025-07-26 02:32:11] +++ CENTOS_MANTISBT_PROJECT=CentOS-7
[2025-07-26 02:32:11] +++ CENTOS_MANTISBT_PROJECT_VERSION=7
[2025-07-26 02:32:11] +++ REDHAT_SUPPORT_PRODUCT=centos
[2025-07-26 02:32:11] +++ REDHAT_SUPPORT_PRODUCT_VERSION=7
[2025-07-26 02:32:11] ++ echo 'CentOS Linux 7 (Core)'
[2025-07-26 02:32:11] + SYSTEM_SOFTWARE='CentOS Linux 7 (Core)'
[2025-07-26 02:32:11] + '[' -n 'CentOS Linux 7 (Core)' ']'
[2025-07-26 02:32:11] + echo 'systemsoftware=CentOS Linux 7 (Core)'
[2025-07-26 02:32:11] + HOME=/scratch/boinc/var/slot8/slots/0
[2025-07-26 02:32:11] + export HOME
[2025-07-26 02:32:11] + cd /scratch/boinc/var/slot8/slots/0
[2025-07-26 02:32:11] + '[' '!' -z '' ']'
[2025-07-26 02:32:11] + '[' -z '' ']'
[2025-07-26 02:32:11] ++ /bin/hostname -f
[2025-07-26 02:32:11] + nodename=skurut31.grid.cesnet.cz
[2025-07-26 02:32:11] + echo nodename=skurut31.grid.cesnet.cz
[2025-07-26 02:32:11] + echo Processors=2
[2025-07-26 02:32:11] + echo Nodecount=1
[2025-07-26 02:32:11] + echo Benchmark=HEPSPEC:1.0
[2025-07-26 02:32:11] + executable=./runpilot2-wrapper.sh
[2025-07-26 02:32:11] + '[' '!' -f ./runpilot2-wrapper.sh ']'
[2025-07-26 02:32:11] ++ dd if=./runpilot2-wrapper.sh count=1
[2025-07-26 02:32:11] ++ head -n 1
[2025-07-26 02:32:11] ++ tr -d '\0'
[2025-07-26 02:32:11] + line1='#!/bin/bash'
[2025-07-26 02:32:11] ++ echo '#!/bin/bash'
[2025-07-26 02:32:11] ++ sed -n 's/^#! *//p'
[2025-07-26 02:32:11] + shebang=/bin/bash
[2025-07-26 02:32:11] ++ echo /bin/bash
[2025-07-26 02:32:11] ++ awk '{print $1}'
[2025-07-26 02:32:11] + interpreter=/bin/bash
[2025-07-26 02:32:11] + '[' /bin/bash = /usr/bin/env ']'
[2025-07-26 02:32:11] + '[' x/bin/bash = x ']'
[2025-07-26 02:32:11] + type /bin/bash
[2025-07-26 02:32:11] + '[' xgnutime = xgnutime ']'
[2025-07-26 02:32:11] + /usr/bin/time -o /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag -a -f 'WallTime=%es\nKernelTime=%Ss\nUserTime=%Us\nCPUUsage=%P\nMaxResidentMemory=%MkB\nAverageResidentMemory=%tkB\nAverageTotalMemory=%KkB\nAverageUnsharedMemory=%DkB\nAverageUnsharedStack=%pkB\nAverageSharedMemory=%XkB\nPageSize=%ZB\nMajorPageFaults=%F\nMinorPageFaults=%R\nSwaps=%W\nForcedSwitches=%c\nWaitSwitches=%w\nInputs=%I\nOutputs=%O\nSocketReceived=%r\nSocketSent=%s\nSignals=%k\n' ./runpilot2-wrapper.sh -q BOINC_MCORE -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE --pilotversion 3.10.4.12 -z -t --piloturl local --mute --container
[2025-07-26 02:32:11] + RESULT=2
[2025-07-26 02:32:11] + sed -i -e /nodename=/d /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-26 02:32:11] ++ grep domain_name init_data.xml
[2025-07-26 02:32:11] ++ awk -F '>' '{print $2}'
[2025-07-26 02:32:11] ++ awk -F '<' '{print $1}'
[2025-07-26 02:32:11] ++ sed -e 's# #_#g'
[2025-07-26 02:32:11] + hostname=skurut31.grid.cesnet.cz
[2025-07-26 02:32:11] ++ grep user_name init_data.xml
[2025-07-26 02:32:11] ++ awk -F '>' '{print $2}'
[2025-07-26 02:32:11] ++ awk -F '<' '{print $1}'
[2025-07-26 02:32:11] ++ sed -e 's# #_#g'
[2025-07-26 02:32:11] + username=praguelcg2
[2025-07-26 02:32:11] + nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-26 02:32:11] + echo nodename=praguelcg2@skurut31.grid.cesnet.cz
[2025-07-26 02:32:11] + '[' -n 4 ']'
[2025-07-26 02:32:11] + sed -i -e s/Processors=1/Processors=4/ /scratch/boinc/var/slot8/slots/0/XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag
[2025-07-26 02:32:11] + echo exitcode=2
[2025-07-26 02:32:11] + runtimeenvironments=
[2025-07-26 02:32:11] + runtimeenvironments='APPS/HEP/ATLAS-SITE;'
[2025-07-26 02:32:11] + RTE_function_0 2
[2025-07-26 02:32:11] + export PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-26 02:32:11] + PROJECT_ROOT=/boincdata/boinc/project/lhcathome
[2025-07-26 02:32:11] + export BOINC_APP=ATLAS
[2025-07-26 02:32:11] + BOINC_APP=ATLAS
[2025-07-26 02:32:11] + export WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-26 02:32:11] + WU_TEMPLATE=templates/ATLAS_IN_DYNAMIC
[2025-07-26 02:32:11] + export RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-26 02:32:11] + RESULT_TEMPLATE=templates/ATLAS_OUT_2
[2025-07-26 02:32:11] + '[' -z 2 ']'
[2025-07-26 02:32:11] + '[' 2 == 1 ']'
[2025-07-26 02:32:11] + '[' 0 -ne 0 ']'
[2025-07-26 02:32:11] + echo 'zip all output files'
[2025-07-26 02:32:11] + flist='*.diag '
[2025-07-26 02:32:11] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-26 02:32:11] + '[' -e ./heartbeat.json ']'
[2025-07-26 02:32:11] + flist='*.diag ./heartbeat.json'
[2025-07-26 02:32:11] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-26 02:32:11] + '[' -e ./output.list ']'
[2025-07-26 02:32:11] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-26 02:32:11] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-26 02:32:11] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1'
[2025-07-26 02:32:11] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-26 02:32:11] + '[' -e ./log.45668900._001067.job.log.1 ']'
[2025-07-26 02:32:11] + flist='*.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1'
[2025-07-26 02:32:11] + for f in ./heartbeat.json ./output.list ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1 ./gmlog/
[2025-07-26 02:32:11] + '[' -e ./gmlog/ ']'
[2025-07-26 02:32:11] + '[' -f output.list ']'
[2025-07-26 02:32:11] + tar cvf result.tar.gz XrIODmfq5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqDMLDmsHe26n.diag ./heartbeat.json ./log.45668900._001067.job.log.1 ./log.45668900._001067.job.log.1
[2025-07-26 02:32:11] + '[' xgnutime = xcgroup ']'
[2025-07-26 02:32:11] + '[' -n '' ']'
[2025-07-26 02:32:11] + '[' -n '' ']'
[2025-07-26 02:32:11] ++ date +%s
[2025-07-26 02:32:11] + ACCOUNTING_ENDTIME=1753489931
[2025-07-26 02:32:11] ++ date -d '1970-01-01 UTC 1753489743 seconds' +%Y%m%d%H%M%SZ
[2025-07-26 02:32:11] + echo LRMSStartTime=20250726022903Z
[2025-07-26 02:32:11] ++ date -d '1970-01-01 UTC 1753489931 seconds' +%Y%m%d%H%M%SZ
[2025-07-26 02:32:11] + echo LRMSEndTime=20250726023211Z
[2025-07-26 02:32:11] + echo walltime=188
[2025-07-26 02:32:11] + echo exitcode=2
[2025-07-26 02:32:11] + exit 2
[2025-07-26 02:32:11] ./runtime_log
[2025-07-26 02:32:11] ./log.45668900._001067.job.log.1
[2025-07-26 02:32:11] ./pilotlog.txt
[2025-07-26 02:32:11] ./runtime_log.err
[2025-07-26 02:32:11] ./PanDA_Pilot-6744423615/log.EVNTtoHITS
[2025-07-26 02:32:11] ./PanDA_Pilot-6744423615/PoolFileCatalog.xml
[2025-07-26 02:32:11] ./PanDA_Pilot-6744423615/prmon.log
[2025-07-26 02:32:11] ./PanDA_Pilot-6744423615/pilotlog.txt
[2025-07-26 02:32:11] ./pilot3/pilot/util/lokirealtimelogger.py
[2025-07-26 02:32:11] ./pilot3/pilot/util/realtimelogger.py
[2025-07-26 02:32:11] ./pilot3/pilot/util/loggingsupport.py
[2025-07-26 02:32:11] ./pilot3/pilot/util/__pycache__/lokirealtimelogger.cpython-39.pyc
[2025-07-26 02:32:11] ./pilot3/pilot/util/__pycache__/loggingsupport.cpython-39.pyc
[2025-07-26 02:32:11] ./p
©2025 CERN