Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:57:45 (1981568): wrapper (7.7.26015): starting
03:57:45 (1981568): wrapper: running run_atlas (--nthreads 10)
[2025-07-24 03:57:45] Arguments: --nthreads 10
[2025-07-24 03:57:45] Threads: 10
[2025-07-24 03:57:45] Checking for CVMFS
[2025-07-24 03:57:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 03:57:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 03:57:46] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 03:57:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 03:57:46] 2.12.6.0 71612 22672 474216 148686 3 487 15713149 21042176 16585 16776704 0 60978015 99.083 133832051 30635 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 03:57:46] CVMFS is ok
[2025-07-24 03:57:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 03:57:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 03:57:46] Further information can be found at the LHC@home message board.
[2025-07-24 03:57:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 03:57:46] Checking for apptainer binary...
[2025-07-24 03:57:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 03:57:46] Running /usr/bin/apptainer --version
[2025-07-24 03:57:46] apptainer version 1.4.1-1.el9
[2025-07-24 03:57:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 03:57:46] c-16-16.aglt2.org
[2025-07-24 03:57:46] apptainer works
[2025-07-24 03:57:46] Set ATHENA_PROC_NUMBER=10
[2025-07-24 03:57:46] Set ATHENA_CORE_NUMBER=10
[2025-07-24 03:57:46] Starting ATLAS job with PandaID=6744423567
[2025-07-24 03:57:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 14:41:36]  *** The last 200 lines of the pilot log: ***
[2025-07-24 14:41:36] 2025-07-24 18:40:59,943 | INFO     | monitor loop #2072: job 0:6744423567 is in state 'finished'
[2025-07-24 14:41:36] 2025-07-24 18:40:59,944 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 14:41:36] 2025-07-24 18:41:01,919 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-24 14:41:36] 2025-07-24 18:41:01,928 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2949.85225
[2025-07-24 14:41:36] 2025-07-24 18:41:01,937 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6744423567/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 14:41:36] 2025-07-24 18:41:01,939 | INFO     | extracted standard info from prmon json
[2025-07-24 14:41:36] 2025-07-24 18:41:01,939 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 14:41:36] 2025-07-24 18:41:01,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 14:41:36] 2025-07-24 18:41:01,940 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 14:41:36] 2025-07-24 18:41:01,940 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 14:41:36] 2025-07-24 18:41:01,957 | INFO     | fitting pss+swap vs Time
[2025-07-24 14:41:36] 2025-07-24 18:41:01,959 | INFO     | sum of square deviations: 77164887834.05775
[2025-07-24 14:41:36] 2025-07-24 18:41:01,974 | INFO     | sum of deviations: 258552846500.83453
[2025-07-24 14:41:36] 2025-07-24 18:41:01,974 | INFO     | mean x: 1753363237.880763
[2025-07-24 14:41:36] 2025-07-24 18:41:01,975 | INFO     | mean y: 2187467.011128776
[2025-07-24 14:41:36] 2025-07-24 18:41:01,975 | INFO     | -- intersect: -5872726225.326344
[2025-07-24 14:41:36] 2025-07-24 18:41:01,975 | INFO     | intersect: -5872726225.326344
[2025-07-24 14:41:36] 2025-07-24 18:41:01,976 | INFO     | chi2: 3.858557449073192
[2025-07-24 14:41:36] 2025-07-24 18:41:01,977 | INFO     | sum of square deviations: 75339422570.14743
[2025-07-24 14:41:36] 2025-07-24 18:41:01,990 | INFO     | sum of deviations: 286844041576.87836
[2025-07-24 14:41:36] 2025-07-24 18:41:01,991 | INFO     | mean x: 1753363085.3878205
[2025-07-24 14:41:36] 2025-07-24 18:41:01,991 | INFO     | mean y: 2189821.983974359
[2025-07-24 14:41:36] 2025-07-24 18:41:01,991 | INFO     | -- intersect: -6673488549.40341
[2025-07-24 14:41:36] 2025-07-24 18:41:01,991 | INFO     | intersect: -6673488549.40341
[2025-07-24 14:41:36] 2025-07-24 18:41:01,992 | INFO     | chi2: 3.6630342428068148
[2025-07-24 14:41:36] 2025-07-24 18:41:01,993 | INFO     | current chi2=3.6630342428068148 (change=5.067261764194834 %)
[2025-07-24 14:41:36] 2025-07-24 18:41:01,993 | INFO     | right removable region: 623
[2025-07-24 14:41:36] 2025-07-24 18:41:01,994 | INFO     | sum of square deviations: 75339084630.14742
[2025-07-24 14:41:36] 2025-07-24 18:41:02,010 | INFO     | sum of deviations: 106946896796.82031
[2025-07-24 14:41:36] 2025-07-24 18:41:02,011 | INFO     | mean x: 1753363390.3878205
[2025-07-24 14:41:36] 2025-07-24 18:41:02,011 | INFO     | mean y: 2200115.8974358975
[2025-07-24 14:41:36] 2025-07-24 18:41:02,012 | INFO     | -- intersect: -2486770575.4732046
[2025-07-24 14:41:36] 2025-07-24 18:41:02,012 | INFO     | intersect: -2486770575.4732046
[2025-07-24 14:41:36] 2025-07-24 18:41:02,013 | INFO     | chi2: 1.026146212652351
[2025-07-24 14:41:36] 2025-07-24 18:41:02,013 | INFO     | current chi2=1.026146212652351 (change=73.40596255995031 %)
[2025-07-24 14:41:36] 2025-07-24 18:41:02,014 | INFO     | sum of square deviations: 73542305226.17477
[2025-07-24 14:41:36] 2025-07-24 18:41:02,030 | INFO     | sum of deviations: 66008417410.12926
[2025-07-24 14:41:36] 2025-07-24 18:41:02,030 | INFO     | mean x: 1753363542.8949919
[2025-07-24 14:41:36] 2025-07-24 18:41:02,031 | INFO     | mean y: 2203584.8481421648
[2025-07-24 14:41:36] 2025-07-24 18:41:02,031 | INFO     | -- intersect: -1571540292.980742
[2025-07-24 14:41:36] 2025-07-24 18:41:02,031 | INFO     | intersect: -1571540292.980742
[2025-07-24 14:41:36] 2025-07-24 18:41:02,032 | INFO     | chi2: 0.8105660449372338
[2025-07-24 14:41:36] 2025-07-24 18:41:02,032 | INFO     | current chi2=0.8105660449372338 (change=21.00871835387788 %)
[2025-07-24 14:41:36] 2025-07-24 18:41:02,032 | INFO     | left removable region: 20
[2025-07-24 14:41:36] 2025-07-24 18:41:02,033 | INFO     | sum of square deviations: 67985384675.85404
[2025-07-24 14:41:36] 2025-07-24 18:41:02,048 | INFO     | sum of deviations: 42805606923.545586
[2025-07-24 14:41:36] 2025-07-24 18:41:02,048 | INFO     | mean x: 1753363664.9170814
[2025-07-24 14:41:36] 2025-07-24 18:41:02,048 | INFO     | mean y: 2210899.150912106
[2025-07-24 14:41:36] 2025-07-24 18:41:02,048 | INFO     | -- intersect: -1101758670.0780501
[2025-07-24 14:41:36] 2025-07-24 18:41:02,049 | INFO     | intersect: -1101758670.0780501
[2025-07-24 14:41:36] 2025-07-24 18:41:02,050 | INFO     | chi2: 0.3232960867795556
[2025-07-24 14:41:36] 2025-07-24 18:41:02,050 | INFO     | -- intersect: -1101758670.0780501
[2025-07-24 14:41:36] 2025-07-24 18:41:02,050 | INFO     | current memory leak: 0.63 B/s (using 603 data points, chi2=0.32)
[2025-07-24 14:41:36] 2025-07-24 18:41:02,052 | INFO     | could have reported an average CPU frequency of 2902 MHz (24 samples)
[2025-07-24 14:41:36] 2025-07-24 18:41:02,052 | INFO     | ..............................
[2025-07-24 14:41:36] 2025-07-24 18:41:02,052 | INFO     | . Timing measurements:
[2025-07-24 14:41:36] 2025-07-24 18:41:02,052 | INFO     | . get job = 0 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,053 | INFO     | . initial setup = 4 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,053 | INFO     | . payload setup = 55 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,053 | INFO     | . stage-in = 0 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,053 | INFO     | . payload execution = 38406 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,053 | INFO     | . stage-out = 2 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,054 | INFO     | . log creation = 0 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,054 | INFO     | ..............................
[2025-07-24 14:41:36] 2025-07-24 18:41:02,221 | INFO     | 
[2025-07-24 14:41:36] 2025-07-24 18:41:02,222 | INFO     | job summary report
[2025-07-24 14:41:36] 2025-07-24 18:41:02,222 | INFO     | --------------------------------------------------
[2025-07-24 14:41:36] 2025-07-24 18:41:02,222 | INFO     | PanDA job id: 6744423567
[2025-07-24 14:41:36] 2025-07-24 18:41:02,222 | INFO     | task id: 45668900
[2025-07-24 14:41:36] 2025-07-24 18:41:02,222 | INFO     | errors: (none)
[2025-07-24 14:41:36] 2025-07-24 18:41:02,222 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 14:41:36] 2025-07-24 18:41:02,222 | INFO     | pilot state: finished 
[2025-07-24 14:41:36] 2025-07-24 18:41:02,223 | INFO     | transexitcode: 0
[2025-07-24 14:41:36] 2025-07-24 18:41:02,223 | INFO     | exeerrorcode: 0
[2025-07-24 14:41:36] 2025-07-24 18:41:02,223 | INFO     | exeerrordiag: 
[2025-07-24 14:41:36] 2025-07-24 18:41:02,223 | INFO     | exitcode: 0
[2025-07-24 14:41:36] 2025-07-24 18:41:02,223 | INFO     | exitmsg: OK
[2025-07-24 14:41:36] 2025-07-24 18:41:02,223 | INFO     | cpuconsumptiontime: 114961 s
[2025-07-24 14:41:36] 2025-07-24 18:41:02,223 | INFO     | nevents: 400
[2025-07-24 14:41:36] 2025-07-24 18:41:02,224 | INFO     | neventsw: 0
[2025-07-24 14:41:36] 2025-07-24 18:41:02,224 | INFO     | pid: 1994245
[2025-07-24 14:41:36] 2025-07-24 18:41:02,224 | INFO     | pgrp: 1994245
[2025-07-24 14:41:36] 2025-07-24 18:41:02,224 | INFO     | corecount: 10
[2025-07-24 14:41:36] 2025-07-24 18:41:02,224 | INFO     | event service: False
[2025-07-24 14:41:36] 2025-07-24 18:41:02,224 | INFO     | sizes: {0: 2397261, 1: 2397460, 12: 2397460, 24: 2397488, 26: 2397778, 35: 2397806, 38465: 2438903, 38466: 2438902, 38468: 2447967, 38472: 2448023, 38479: 2448217}
[2025-07-24 14:41:36] 2025-07-24 18:41:02,225 | INFO     | --------------------------------------------------
[2025-07-24 14:41:36] 2025-07-24 18:41:02,225 | INFO     | 
[2025-07-24 14:41:36] 2025-07-24 18:41:02,225 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 14:41:36] 2025-07-24 18:41:02,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,248 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,248 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,248 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,248 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,248 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,249 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,249 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,249 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 14:41:36] 2025-07-24 18:41:02,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,250 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 14:41:36] 2025-07-24 18:41:02,250 | INFO     | job 6744423567 has completed (purged errors)
[2025-07-24 14:41:36] 2025-07-24 18:41:02,250 | INFO     | overall cleanup function is called
[2025-07-24 14:41:36] 2025-07-24 18:41:03,259 | INFO     | --- collectZombieJob: --- 10, [1994245]
[2025-07-24 14:41:36] 2025-07-24 18:41:03,260 | INFO     | zombie collector waiting for pid 1994245
[2025-07-24 14:41:36] 2025-07-24 18:41:03,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 14:41:36] 2025-07-24 18:41:03,260 | INFO     | collected zombie processes
[2025-07-24 14:41:36] 2025-07-24 18:41:03,261 | INFO     | will attempt to kill all subprocesses of pid=1994245
[2025-07-24 14:41:36] 2025-07-24 18:41:03,730 | INFO     | process IDs to be killed: [1994245] (in reverse order)
[2025-07-24 14:41:36] 2025-07-24 18:41:03,869 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 14:41:36] 2025-07-24 18:41:03,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 14:41:36] 2025-07-24 18:41:03,888 | INFO     | did not find any defunct processes belonging to 1994245
[2025-07-24 14:41:36] 2025-07-24 18:41:03,907 | INFO     | did not find any defunct processes belonging to 1994245
[2025-07-24 14:41:36] 2025-07-24 18:41:03,907 | INFO     | ready for new job
[2025-07-24 14:41:36] 2025-07-24 18:41:03,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 14:41:36] 2025-07-24 18:41:03,911 | INFO     | ***************************************
[2025-07-24 14:41:36] 2025-07-24 18:41:03,912 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 14:41:36] 2025-07-24 18:41:03,912 | INFO     | ***************************************
[2025-07-24 14:41:36] 2025-07-24 18:41:03,912 | INFO     | 
[2025-07-24 14:41:36] 2025-07-24 18:41:03,927 | INFO     | architecture information:
[2025-07-24 14:41:36] 2025-07-24 18:41:03,927 | INFO     | executing command: cat /etc/os-release
[2025-07-24 14:41:36] 2025-07-24 18:41:03,946 | INFO     | cat /etc/os-release:
[2025-07-24 14:41:36] NAME="CentOS Linux"
[2025-07-24 14:41:36] VERSION="7 (Core)"
[2025-07-24 14:41:36] ID="centos"
[2025-07-24 14:41:36] ID_LIKE="rhel fedora"
[2025-07-24 14:41:36] VERSION_ID="7"
[2025-07-24 14:41:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 14:41:36] ANSI_COLOR="0;31"
[2025-07-24 14:41:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 14:41:36] HOME_URL="https://www.centos.org/"
[2025-07-24 14:41:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 14:41:36] 
[2025-07-24 14:41:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 14:41:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 14:41:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 14:41:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 14:41:36] 
[2025-07-24 14:41:36] 2025-07-24 18:41:03,946 | INFO     | ***************************************
[2025-07-24 14:41:36] 2025-07-24 18:41:04,449 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 14:41:36] 2025-07-24 18:41:04,467 | INFO     | sufficient remaining disk space (53732179968 B)
[2025-07-24 14:41:36] 2025-07-24 18:41:04,468 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 14:41:36] 2025-07-24 18:41:04,468 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 14:41:36] 2025-07-24 18:41:04,468 | INFO     | update_server=False
[2025-07-24 14:41:36] 2025-07-24 18:41:04,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 14:41:36] 2025-07-24 18:41:04,513 | INFO     | all data control threads have been joined
[2025-07-24 14:41:36] 2025-07-24 18:41:04,636 | INFO     | all job control threads have been joined
[2025-07-24 14:41:36] 2025-07-24 18:41:04,662 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 14:41:36] 2025-07-24 18:41:04,965 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-24 14:41:36] 2025-07-24 18:41:04,966 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-24 14:41:36] 2025-07-24 18:41:04,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 14:41:36] 2025-07-24 18:41:04,968 | INFO     | will abort loop
[2025-07-24 14:41:36] 2025-07-24 18:41:05,118 | INFO     | all payload control threads have been joined
[2025-07-24 14:41:36] 2025-07-24 18:41:05,474 | INFO     | [job] retrieve thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:05,519 | INFO     | [data] control thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:05,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 14:41:36] 2025-07-24 18:41:05,589 | INFO     | [job] validate thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:05,622 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:05,642 | INFO     | [job] control thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:05,741 | INFO     | [payload] failed_post thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:05,929 | INFO     | [payload] validate_post thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:05,973 | INFO     | [job] job monitor thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:06,124 | INFO     | [payload] control thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:06,333 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:06,338 | INFO     | [data] copytool_in thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:06,649 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:06,667 | INFO     | [data] copytool_out thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:06,966 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:07,231 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 14:41:36] 2025-07-24 18:41:08,237 | INFO     | [job] queue monitor thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:09,543 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 14:41:36] 2025-07-24 18:41:11,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546467424064)>', '<ExcThread(monitor, started 140545758328576)>']
[2025-07-24 14:41:36] 2025-07-24 18:41:16,475 | INFO     | all workflow threads have been joined
[2025-07-24 14:41:36] 2025-07-24 18:41:16,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 14:41:36] 2025-07-24 18:41:16,476 | INFO     | traces error code: 0
[2025-07-24 14:41:36] 2025-07-24 18:41:16,477 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 14:41:36] 2025-07-24 18:41:35,119 | INFO     | PID=1985596 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 14:41:36] 2025-07-24 18:41:35,120 | INFO     | .. there are 24 such processes running
[2025-07-24 14:41:36] 2025-07-24 18:41:35,121 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 14:41:36] 2025-07-24 18:41:35,121 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 14:41:36] 2025-07-24 18:41:35,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 14:41:36] 2025-07-24 18:41:35,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 14:41:36] 2025-07-24 18:41:35,122 | INFO     | [monitor] control thread has ended
[2025-07-24 14:41:36] 2025-07-24 18:41:35,401 [wrapper] ==== pilot stdout END ====
[2025-07-24 14:41:36] 2025-07-24 18:41:35,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 14:41:36] 2025-07-24 18:41:35,447 [wrapper] pilotpid: 1985596
[2025-07-24 14:41:36] 2025-07-24 18:41:35,470 [wrapper] Pilot exit status: 0
[2025-07-24 14:41:36] 2025-07-24 18:41:35,637 [wrapper] pandaids: 6744423567
[2025-07-24 14:41:36] 2025-07-24 18:41:35,802 [wrapper] cleanup supervisor_pilot 3455548 1985597
[2025-07-24 14:41:36] 2025-07-24 18:41:35,844 [wrapper] Test setup, not cleaning
[2025-07-24 14:41:36] 2025-07-24 18:41:35,883 [wrapper] apfmon messages muted
[2025-07-24 14:41:36] 2025-07-24 18:41:35,902 [wrapper] ==== wrapper stdout END ====
[2025-07-24 14:41:36] 2025-07-24 18:41:35,914 [wrapper] ==== wrapper stderr END ====
[2025-07-24 14:41:36]  *** Error codes and diagnostics ***
[2025-07-24 14:41:36]     "exeErrorCode": 0,
[2025-07-24 14:41:36]     "exeErrorDiag": "",
[2025-07-24 14:41:36]     "pilotErrorCode": 0,
[2025-07-24 14:41:36]     "pilotErrorDiag": "",
[2025-07-24 14:41:36]  *** Listing of results directory ***
[2025-07-24 14:41:36] total 467356
[2025-07-24 14:41:36] -rwx------. 1 boincer umatlas     36292 Jul 24 03:47 runpilot2-wrapper.sh
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas    530466 Jul 24 03:47 pilot3.tar.gz
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas      5112 Jul 24 03:47 queuedata.json
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas       100 Jul 24 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 14:41:36] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 03:57 run_atlas
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas       105 Jul 24 03:57 job.xml
[2025-07-24 14:41:36] -rw-r--r--. 2 boincer umatlas 276794050 Jul 24 03:57 EVNT.45668898._000041.pool.root.1
[2025-07-24 14:41:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 03:57 start_atlas.sh
[2025-07-24 14:41:36] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 03:57 shared
[2025-07-24 14:41:36] -rw-r--r--. 2 boincer umatlas    542883 Jul 24 03:57 input.tar.gz
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas         0 Jul 24 03:57 boinc_lockfile
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas      2539 Jul 24 03:57 pandaJob.out
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas    978866 Jul 24 03:58 agis_schedconf.cvmfs.json
[2025-07-24 14:41:36] drwx------. 4 boincer umatlas      4096 Jul 24 03:58 pilot3
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas      6524 Jul 24 14:38 init_data.xml
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas 191026945 Jul 24 14:40 HITS.45668900._001019.pool.root.1
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas       532 Jul 24 14:40 boinc_task_state.xml
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas      1039 Jul 24 14:40 memory_monitor_summary.json
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas   1593052 Jul 24 14:40 agis_ddmendpoints.agis.ALL.json
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas    605146 Jul 24 14:40 log.45668900._001019.job.log.tgz.1
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas      7818 Jul 24 14:41 heartbeat.json
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 14:41 boinc_mmap_file
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas        29 Jul 24 14:41 wrapper_checkpoint.txt
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas        95 Jul 24 14:41 pilot_heartbeat.json
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas       823 Jul 24 14:41 pilotlog.txt
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas   2834475 Jul 24 14:41 log.45668900._001019.job.log.1
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas       357 Jul 24 14:41 output.list
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas       620 Jul 24 14:41 runtime_log
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas   3461120 Jul 24 14:41 result.tar.gz
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas       661 Jul 24 14:41 tCKODmWq5y7n9Rq4apOajLDm4fhM0noT9bVof3QYDm3dwKDmhFdYmm.diag
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas      8658 Jul 24 14:41 runtime_log.err
[2025-07-24 14:41:36] -rw-r--r--. 1 boincer umatlas     21264 Jul 24 14:41 stderr.txt
[2025-07-24 14:41:36] HITS file was successfully produced:
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas 191026945 Jul 24 14:40 shared/HITS.pool.root.1
[2025-07-24 14:41:36]  *** Contents of shared directory: ***
[2025-07-24 14:41:36] total 460792
[2025-07-24 14:41:36] -rw-r--r--. 2 boincer umatlas 276794050 Jul 24 03:57 ATLAS.root_0
[2025-07-24 14:41:36] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 03:57 start_atlas.sh
[2025-07-24 14:41:36] -rw-r--r--. 2 boincer umatlas    542883 Jul 24 03:57 input.tar.gz
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas 191026945 Jul 24 14:40 HITS.pool.root.1
[2025-07-24 14:41:36] -rw-------. 1 boincer umatlas   3461120 Jul 24 14:41 result.tar.gz
14:41:37 (1981568): run_atlas exited; CPU time 116584.334527
14:41:37 (1981568): called boinc_finish(0)

</stderr_txt>
]]>

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