Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:48:40 (21960): wrapper (7.7.26015): starting
03:48:40 (21960): wrapper: running run_atlas (--nthreads 4)
[2025-07-24 03:48:40] Arguments: --nthreads 4
[2025-07-24 03:48:40] Threads: 4
[2025-07-24 03:48:40] Checking for CVMFS
[2025-07-24 03:48:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 03:48:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 03:48:41] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 03:48:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 03:48:41] 2.11.2.0 26179 521460 96376 148686 2 1 14037128 20275201 1 130560 0 61517817 99.975 22593813 20748 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-24 03:48:41] CVMFS is ok
[2025-07-24 03:48:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 03:48:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 03:48:41] Further information can be found at the LHC@home message board.
[2025-07-24 03:48:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 03:48:41] Checking for apptainer binary...
[2025-07-24 03:48:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 03:48:41] Running /usr/bin/apptainer --version
[2025-07-24 03:48:41] apptainer version 1.3.2-1.el7
[2025-07-24 03:48:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 03:48:42] c-205-33.aglt2.org
[2025-07-24 03:48:42] apptainer works
[2025-07-24 03:48:42] Set ATHENA_PROC_NUMBER=4
[2025-07-24 03:48:42] Set ATHENA_CORE_NUMBER=4
[2025-07-24 03:48:42] Starting ATLAS job with PandaID=6744422909
[2025-07-24 03:48:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 06:11:37]  *** The last 200 lines of the pilot log: ***
[2025-07-24 06:11:37] 2025-07-24 10:11:22,050 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 06:11:37] 2025-07-24 10:11:22,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 06:11:37] 2025-07-24 10:11:22,050 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 06:11:37] 2025-07-24 10:11:22,050 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 06:11:37] 2025-07-24 10:11:22,051 | INFO     | fitting pss+swap vs Time
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | sum of square deviations: 850825255.0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | sum of deviations: -9228816483.500006
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | mean x: 1753347591.5
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | mean y: 2356401.807142857
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | -- intersect: 19020742443.650997
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | intersect: 19020742443.650997
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | chi2: 1.2106483632231184
[2025-07-24 06:11:37] 2025-07-24 10:11:22,052 | INFO     | sum of square deviations: 762879420.0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,053 | INFO     | sum of deviations: -8740116050.999998
[2025-07-24 06:11:37] 2025-07-24 10:11:22,053 | INFO     | mean x: 1753347439.0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,053 | INFO     | mean y: 2357249.6148148146
[2025-07-24 06:11:37] 2025-07-24 10:11:22,053 | INFO     | sufficient remaining disk space (18492686336 B)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,053 | INFO     | -- intersect: 20090014214.569565
[2025-07-24 06:11:37] 2025-07-24 10:11:22,053 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,053 | INFO     | intersect: 20090014214.569565
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | chi2: 1.208558447347018
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | current chi2=1.208558447347018 (change=0.17262781990110854 %)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | right removable region: 134
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | sum of square deviations: 762879420.0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | sum of deviations: -19267564676.0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | mean x: 1753347744.0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | mean y: 2373241.7333333334
[2025-07-24 06:11:37] 2025-07-24 10:11:22,054 | INFO     | -- intersect: 44285572095.14937
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | intersect: 44285572095.14937
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | chi2: 0.15158692495008433
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | current chi2=0.15158692495008433 (change=87.47886425530587 %)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | sum of square deviations: 681212772.5
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | sum of deviations: -14928213623.5
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | mean x: 1753347896.5
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | mean y: 2365130.346153846
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | -- intersect: 38425531888.08097
[2025-07-24 06:11:37] 2025-07-24 10:11:22,055 | INFO     | intersect: 38425531888.08097
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | chi2: 0.14047590676679947
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | current chi2=0.14047590676679947 (change=7.329799840549295 %)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | left removable region: 20
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | sum of square deviations: 459366752.5
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | sum of deviations: -4859326093.499999
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | mean x: 1753348018.5
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | mean y: 2345026.00877193
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | -- intersect: 18549812231.493065
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | intersect: 18549812231.493065
[2025-07-24 06:11:37] 2025-07-24 10:11:22,056 | INFO     | chi2: 0.07623283223127311
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | -- intersect: 18549812231.493065
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | current memory leak: -10.58 B/s (using 114 data points, chi2=0.08)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | could have reported an average CPU frequency of 3059 MHz (8 samples)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | ..............................
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | . Timing measurements:
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | . get job = 0 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6744422909: 2764920 B (within 2537553920 B limit)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | . initial setup = 2 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | . payload setup = 4 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6744422909/HITS.45668900._000677.pool.root.1 does not exist (skip from workdir size calculation)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,057 | INFO     | . stage-in = 0 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,058 | INFO     | total size of present files: 0 B (workdir size: 2764920 B)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,058 | INFO     | . payload execution = 8521 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,058 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6744422909/HITS.45668900._000677.pool.root.1 since it does not exist
[2025-07-24 06:11:37] 2025-07-24 10:11:22,058 | INFO     | . stage-out = 0 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,058 | INFO     | . log creation = 0 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,058 | INFO     | ..............................
[2025-07-24 06:11:37] 2025-07-24 10:11:22,095 | INFO     | 
[2025-07-24 06:11:37] 2025-07-24 10:11:22,095 | INFO     | job summary report
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | --------------------------------------------------
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | PanDA job id: 6744422909
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | task id: 45668900
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | errors: (none)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | pilot state: finished 
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | transexitcode: 0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | exeerrorcode: 0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,096 | INFO     | exeerrordiag: 
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | exitcode: 0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | exitmsg: OK
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | cpuconsumptiontime: 33073 s
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | nevents: 400
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | neventsw: 0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | pid: 32337
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | pgrp: 32337
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | corecount: 4
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | event service: False
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | sizes: {0: 2397428, 3: 2397690, 11: 2397718, 8529: 2425751, 8530: 2434749, 8531: 2434805, 8537: 2435155}
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | --------------------------------------------------
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | 
[2025-07-24 06:11:37] 2025-07-24 10:11:22,097 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | job 6744422909 has completed (purged errors)
[2025-07-24 06:11:37] 2025-07-24 10:11:22,108 | INFO     | overall cleanup function is called
[2025-07-24 06:11:37] 2025-07-24 10:11:22,133 | INFO     | number of running child processes to parent process 32337: 1
[2025-07-24 06:11:37] 2025-07-24 10:11:22,133 | INFO     | maximum number of monitored processes: 6
[2025-07-24 06:11:37] 2025-07-24 10:11:22,133 | INFO     | aborting job monitoring since job object (job id=6744422909) has expired
[2025-07-24 06:11:37] 2025-07-24 10:11:23,114 | INFO     | --- collectZombieJob: --- 10, [32337]
[2025-07-24 06:11:37] 2025-07-24 10:11:23,115 | INFO     | zombie collector waiting for pid 32337
[2025-07-24 06:11:37] 2025-07-24 10:11:23,115 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 06:11:37] 2025-07-24 10:11:23,115 | INFO     | collected zombie processes
[2025-07-24 06:11:37] 2025-07-24 10:11:23,115 | INFO     | will attempt to kill all subprocesses of pid=32337
[2025-07-24 06:11:37] 2025-07-24 10:11:23,148 | INFO     | process IDs to be killed: [32337] (in reverse order)
[2025-07-24 06:11:37] 2025-07-24 10:11:23,170 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 06:11:37] 2025-07-24 10:11:23,170 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 06:11:37] 2025-07-24 10:11:23,171 | INFO     | did not find any defunct processes belonging to 32337
[2025-07-24 06:11:37] 2025-07-24 10:11:23,172 | INFO     | did not find any defunct processes belonging to 32337
[2025-07-24 06:11:37] 2025-07-24 10:11:23,172 | INFO     | ready for new job
[2025-07-24 06:11:37] 2025-07-24 10:11:23,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 06:11:37] 2025-07-24 10:11:23,173 | INFO     | ***************************************
[2025-07-24 06:11:37] 2025-07-24 10:11:23,173 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 06:11:37] 2025-07-24 10:11:23,173 | INFO     | ***************************************
[2025-07-24 06:11:37] 2025-07-24 10:11:23,173 | INFO     | 
[2025-07-24 06:11:37] 2025-07-24 10:11:23,173 | INFO     | architecture information:
[2025-07-24 06:11:37] 2025-07-24 10:11:23,174 | INFO     | executing command: cat /etc/os-release
[2025-07-24 06:11:37] 2025-07-24 10:11:23,181 | INFO     | cat /etc/os-release:
[2025-07-24 06:11:37] NAME="CentOS Linux"
[2025-07-24 06:11:37] VERSION="7 (Core)"
[2025-07-24 06:11:37] ID="centos"
[2025-07-24 06:11:37] ID_LIKE="rhel fedora"
[2025-07-24 06:11:37] VERSION_ID="7"
[2025-07-24 06:11:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 06:11:37] ANSI_COLOR="0;31"
[2025-07-24 06:11:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 06:11:37] HOME_URL="https://www.centos.org/"
[2025-07-24 06:11:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 06:11:37] 
[2025-07-24 06:11:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 06:11:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 06:11:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 06:11:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 06:11:37] 
[2025-07-24 06:11:37] 2025-07-24 10:11:23,181 | INFO     | ***************************************
[2025-07-24 06:11:37] 2025-07-24 10:11:23,684 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 06:11:37] 2025-07-24 10:11:23,705 | INFO     | sufficient remaining disk space (18496880640 B)
[2025-07-24 06:11:37] 2025-07-24 10:11:23,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 06:11:37] 2025-07-24 10:11:23,706 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 06:11:37] 2025-07-24 10:11:23,706 | INFO     | update_server=False
[2025-07-24 06:11:37] 2025-07-24 10:11:23,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 06:11:37] 2025-07-24 10:11:23,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 06:11:37] 2025-07-24 10:11:23,707 | INFO     | aborting loop
[2025-07-24 06:11:37] 2025-07-24 10:11:23,707 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-24 06:11:37] 2025-07-24 10:11:23,708 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 06:11:37] 2025-07-24 10:11:23,708 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 06:11:37] 2025-07-24 10:11:23,709 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 06:11:37] 2025-07-24 10:11:23,709 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 06:11:37] 2025-07-24 10:11:23,979 | INFO     | all job control threads have been joined
[2025-07-24 06:11:37] 2025-07-24 10:11:24,369 | INFO     | all data control threads have been joined
[2025-07-24 06:11:37] 2025-07-24 10:11:24,539 | INFO     | all payload control threads have been joined
[2025-07-24 06:11:37] 2025-07-24 10:11:24,710 | INFO     | [job] retrieve thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:24,711 | INFO     | [job] job monitor thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:24,713 | INFO     | [job] queue monitor thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:24,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 06:11:37] 2025-07-24 10:11:24,984 | INFO     | [job] control thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,374 | INFO     | [data] control thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,451 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,511 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,518 | INFO     | [data] copytool_in thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,520 | INFO     | [job] validate thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,545 | INFO     | [payload] control thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,735 | INFO     | [payload] failed_post thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,767 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:25,784 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:26,189 | INFO     | [payload] validate_post thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:26,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 06:11:37] 2025-07-24 10:11:26,912 | INFO     | [data] copytool_out thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:30,398 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 06:11:37] 2025-07-24 10:11:32,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140701647902528)>', '<ExcThread(monitor, started 140700838520576)>']
[2025-07-24 06:11:37] 2025-07-24 10:11:32,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 06:11:37] 2025-07-24 10:11:32,740 | INFO     | [monitor] control thread has ended
[2025-07-24 06:11:37] 2025-07-24 10:11:37,383 | INFO     | all workflow threads have been joined
[2025-07-24 06:11:37] 2025-07-24 10:11:37,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 06:11:37] 2025-07-24 10:11:37,394 | INFO     | traces error code: 0
[2025-07-24 06:11:37] 2025-07-24 10:11:37,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 06:11:37] 2025-07-24 10:11:37,496 [wrapper] ==== pilot stdout END ====
[2025-07-24 06:11:37] 2025-07-24 10:11:37,498 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 06:11:37] 2025-07-24 10:11:37,500 [wrapper] pilotpid: 25894
[2025-07-24 06:11:37] 2025-07-24 10:11:37,502 [wrapper] Pilot exit status: 0
[2025-07-24 06:11:37] 2025-07-24 10:11:37,508 [wrapper] pandaids: 6744422909
[2025-07-24 06:11:37] 2025-07-24 10:11:37,523 [wrapper] cleanup supervisor_pilot 11667 25895
[2025-07-24 06:11:37] 2025-07-24 10:11:37,525 [wrapper] Test setup, not cleaning
[2025-07-24 06:11:37] 2025-07-24 10:11:37,527 [wrapper] apfmon messages muted
[2025-07-24 06:11:37] 2025-07-24 10:11:37,529 [wrapper] ==== wrapper stdout END ====
[2025-07-24 06:11:37] 2025-07-24 10:11:37,531 [wrapper] ==== wrapper stderr END ====
[2025-07-24 06:11:37]  *** Error codes and diagnostics ***
[2025-07-24 06:11:37]     "exeErrorCode": 0,
[2025-07-24 06:11:37]     "exeErrorDiag": "",
[2025-07-24 06:11:37]     "pilotErrorCode": 0,
[2025-07-24 06:11:37]     "pilotErrorDiag": "",
[2025-07-24 06:11:37]  *** Listing of results directory ***
[2025-07-24 06:11:37] total 462412
[2025-07-24 06:11:37] -rwx------ 1 boincer umatlas     36292 Jul 24 03:46 runpilot2-wrapper.sh
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas    530466 Jul 24 03:47 pilot3.tar.gz
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas      5112 Jul 24 03:47 queuedata.json
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas       100 Jul 24 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 06:11:37] -rwxr-xr-x 1 boincer umatlas      7986 Jul 24 03:48 run_atlas
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas       105 Jul 24 03:48 job.xml
[2025-07-24 06:11:37] -rw-r--r-- 2 boincer umatlas 277550502 Jul 24 03:48 EVNT.45668898._000027.pool.root.1
[2025-07-24 06:11:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 03:48 start_atlas.sh
[2025-07-24 06:11:37] drwxrwx--x 2 boincer umatlas      4096 Jul 24 03:48 shared
[2025-07-24 06:11:37] -rw-r--r-- 2 boincer umatlas    542880 Jul 24 03:48 input.tar.gz
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas         0 Jul 24 03:48 boinc_lockfile
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas      2537 Jul 24 03:48 pandaJob.out
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas    978866 Jul 24 03:48 agis_schedconf.cvmfs.json
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas   1593041 Jul 24 03:48 agis_ddmendpoints.agis.ALL.json
[2025-07-24 06:11:37] drwx------ 4 boincer umatlas      4096 Jul 24 03:48 pilot3
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas      6154 Jul 24 06:02 init_data.xml
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas 189953446 Jul 24 06:10 HITS.45668900._000677.pool.root.1
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas        95 Jul 24 06:10 pilot_heartbeat.json
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas      8192 Jul 24 06:11 boinc_mmap_file
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas        27 Jul 24 06:11 wrapper_checkpoint.txt
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas       530 Jul 24 06:11 boinc_task_state.xml
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas      1040 Jul 24 06:11 memory_monitor_summary.json
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas    281515 Jul 24 06:11 log.45668900._000677.job.log.tgz.1
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas      7824 Jul 24 06:11 heartbeat.json
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas      4480 Jul 24 06:11 pilotlog.txt
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas    787555 Jul 24 06:11 log.45668900._000677.job.log.1
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas       357 Jul 24 06:11 output.list
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas       620 Jul 24 06:11 runtime_log
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas   1085440 Jul 24 06:11 result.tar.gz
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas      8660 Jul 24 06:11 runtime_log.err
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas       657 Jul 24 06:11 lDoMDmRq5y7n9Rq4apOajLDm4fhM0noT9bVof3QYDmvcwKDmy11ezn.diag
[2025-07-24 06:11:37] -rw-r--r-- 1 boincer umatlas     21244 Jul 24 06:11 stderr.txt
[2025-07-24 06:11:37] HITS file was successfully produced:
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas 189953446 Jul 24 06:10 shared/HITS.pool.root.1
[2025-07-24 06:11:37]  *** Contents of shared directory: ***
[2025-07-24 06:11:37] total 458160
[2025-07-24 06:11:37] -rw-r--r-- 2 boincer umatlas 277550502 Jul 24 03:48 ATLAS.root_0
[2025-07-24 06:11:37] -rw-r--r-- 2 boincer umatlas     15095 Jul 24 03:48 start_atlas.sh
[2025-07-24 06:11:37] -rw-r--r-- 2 boincer umatlas    542880 Jul 24 03:48 input.tar.gz
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas 189953446 Jul 24 06:10 HITS.pool.root.1
[2025-07-24 06:11:37] -rw------- 1 boincer umatlas   1085440 Jul 24 06:11 result.tar.gz
06:11:39 (21960): run_atlas exited; CPU time 33095.087363
06:11:39 (21960): called boinc_finish(0)

</stderr_txt>
]]>

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