Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:28:03 (547): wrapper (7.7.26015): starting
15:28:03 (547): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 15:28:03] Arguments: --nthreads 8
[2025-07-24 15:28:03] Threads: 8
[2025-07-24 15:28:03] Checking for CVMFS
[2025-07-24 15:28:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 15:28:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 15:28:04] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 15:28:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 15:28:05] 2.11.2.0 25395 105287 136668 148703 3 158 15775707 25165825 3801 130560 0 82156608 99.865 48471571 3578 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-24 15:28:05] CVMFS is ok
[2025-07-24 15:28:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 15:28:05] Checking for apptainer binary...
[2025-07-24 15:28:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 15:28:05] Running /usr/bin/apptainer --version
[2025-07-24 15:28:06] apptainer version 1.3.2-1.el7
[2025-07-24 15:28:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 15:28:17] cg-vwn454.simple-grid.lan
[2025-07-24 15:28:17] apptainer works
[2025-07-24 15:28:17] Set ATHENA_PROC_NUMBER=8
[2025-07-24 15:28:17] Set ATHENA_CORE_NUMBER=8
[2025-07-24 15:28:17] Starting ATLAS job with PandaID=6744422290
[2025-07-24 15:28:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 22:29:08]  *** The last 200 lines of the pilot log: ***
[2025-07-24 22:29:08] 2025-07-24 18:30:11,323 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 22:29:08] 2025-07-24 18:30:11,323 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 22:29:08] 2025-07-24 18:30:11,335 | INFO     | fitting pss+swap vs Time
[2025-07-24 22:29:08] 2025-07-24 18:30:11,336 | INFO     | sum of square deviations: 7960484140.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,338 | INFO     | sum of deviations: -25144355550.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,339 | INFO     | mean x: 1753372728.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,339 | INFO     | mean y: 2511990.9830508474
[2025-07-24 22:29:08] 2025-07-24 18:30:11,339 | INFO     | -- intersect: 5540796661.75754
[2025-07-24 22:29:08] 2025-07-24 18:30:11,339 | INFO     | intersect: 5540796661.75754
[2025-07-24 22:29:08] 2025-07-24 18:30:11,339 | INFO     | chi2: 2.4747197461142085
[2025-07-24 22:29:08] 2025-07-24 18:30:11,340 | INFO     | sum of square deviations: 7562532492.5
[2025-07-24 22:29:08] 2025-07-24 18:30:11,342 | INFO     | sum of deviations: -5160549064.999998
[2025-07-24 22:29:08] 2025-07-24 18:30:11,343 | INFO     | mean x: 1753372575.5
[2025-07-24 22:29:08] 2025-07-24 18:30:11,343 | INFO     | mean y: 2519545.731034483
[2025-07-24 22:29:08] 2025-07-24 18:30:11,343 | INFO     | -- intersect: 1198992448.699281
[2025-07-24 22:29:08] 2025-07-24 18:30:11,343 | INFO     | intersect: 1198992448.699281
[2025-07-24 22:29:08] 2025-07-24 18:30:11,343 | INFO     | chi2: 1.7058450698370857
[2025-07-24 22:29:08] 2025-07-24 18:30:11,343 | INFO     | current chi2=1.7058450698370857 (change=31.069161568068694 %)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,344 | INFO     | sum of square deviations: 7178069470.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,346 | INFO     | sum of deviations: -5117425785.999996
[2025-07-24 22:29:08] 2025-07-24 18:30:11,346 | INFO     | mean x: 1753372423.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,346 | INFO     | mean y: 2519562.852631579
[2025-07-24 22:29:08] 2025-07-24 18:30:11,347 | INFO     | -- intersect: 1252542746.3035843
[2025-07-24 22:29:08] 2025-07-24 18:30:11,347 | INFO     | intersect: 1252542746.3035843
[2025-07-24 22:29:08] 2025-07-24 18:30:11,347 | INFO     | chi2: 1.7055959963168206
[2025-07-24 22:29:08] 2025-07-24 18:30:11,347 | INFO     | current chi2=1.7055959963168206 (change=0.014601180650534708 %)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,347 | INFO     | right removable region: 284
[2025-07-24 22:29:08] 2025-07-24 18:30:11,348 | INFO     | sum of square deviations: 7562532492.5
[2025-07-24 22:29:08] 2025-07-24 18:30:11,350 | INFO     | sum of deviations: -70705573878.5
[2025-07-24 22:29:08] 2025-07-24 18:30:11,350 | INFO     | mean x: 1753372880.5
[2025-07-24 22:29:08] 2025-07-24 18:30:11,351 | INFO     | mean y: 2529316.6862068963
[2025-07-24 22:29:08] 2025-07-24 18:30:11,351 | INFO     | -- intersect: 16395614022.331997
[2025-07-24 22:29:08] 2025-07-24 18:30:11,351 | INFO     | intersect: 16395614022.331997
[2025-07-24 22:29:08] 2025-07-24 18:30:11,351 | INFO     | chi2: 1.012537972251937
[2025-07-24 22:29:08] 2025-07-24 18:30:11,351 | INFO     | current chi2=1.012537972251937 (change=59.08474186453563 %)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,352 | INFO     | sum of square deviations: 7178069470.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,354 | INFO     | sum of deviations: -68331514115.99999
[2025-07-24 22:29:08] 2025-07-24 18:30:11,355 | INFO     | mean x: 1753373033.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,355 | INFO     | mean y: 2528353.585964912
[2025-07-24 22:29:08] 2025-07-24 18:30:11,355 | INFO     | -- intersect: 16693734067.850697
[2025-07-24 22:29:08] 2025-07-24 18:30:11,355 | INFO     | intersect: 16693734067.850697
[2025-07-24 22:29:08] 2025-07-24 18:30:11,355 | INFO     | chi2: 0.9985855968390058
[2025-07-24 22:29:08] 2025-07-24 18:30:11,356 | INFO     | current chi2=0.9985855968390058 (change=1.3779607081698224 %)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,356 | INFO     | left removable region: 20
[2025-07-24 22:29:08] 2025-07-24 18:30:11,356 | INFO     | sum of square deviations: 5705372090.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,359 | INFO     | sum of deviations: -29675441284.0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,359 | INFO     | mean x: 1753373002.5
[2025-07-24 22:29:08] 2025-07-24 18:30:11,359 | INFO     | mean y: 2528827.106060606
[2025-07-24 22:29:08] 2025-07-24 18:30:11,359 | INFO     | -- intersect: 9122375309.307983
[2025-07-24 22:29:08] 2025-07-24 18:30:11,359 | INFO     | intersect: 9122375309.307983
[2025-07-24 22:29:08] 2025-07-24 18:30:11,359 | INFO     | chi2: 0.17226274272686376
[2025-07-24 22:29:08] 2025-07-24 18:30:11,360 | INFO     | -- intersect: 9122375309.307983
[2025-07-24 22:29:08] 2025-07-24 18:30:11,360 | INFO     | current memory leak: -5.20 B/s (using 264 data points, chi2=0.17)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | ..............................
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . Timing measurements:
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . get job = 0 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . initial setup = 2 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . payload setup = 10 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . stage-in = 0 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . payload execution = 17966 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . stage-out = 3 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | . log creation = 1 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,361 | INFO     | ..............................
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | 
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | job summary report
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | --------------------------------------------------
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | PanDA job id: 6744422290
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | task id: 45668900
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | errors: (none)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | pilot state: finished 
[2025-07-24 22:29:08] 2025-07-24 18:30:11,565 | INFO     | transexitcode: 0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | exeerrorcode: 0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | exeerrordiag: 
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | exitcode: 0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | exitmsg: OK
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | cpuconsumptiontime: 69153 s
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | nevents: 400
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | neventsw: 0
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | pid: 10936
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | pgrp: 10936
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | corecount: 8
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | event service: False
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | sizes: {0: 2396600, 1: 2397456, 2: 2397456, 10: 2397746, 12: 2397774, 17980: 2429724, 17981: 2429851, 17984: 2438916, 17987: 2438972, 18079: 2439166}
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | --------------------------------------------------
[2025-07-24 22:29:08] 2025-07-24 18:30:11,566 | INFO     | 
[2025-07-24 22:29:08] 2025-07-24 18:30:11,567 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-07-24 22:29:08] 2025-07-24 18:30:11,853 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 22:29:08] 2025-07-24 18:30:11,856 | INFO     | job 6744422290 has completed (purged errors)
[2025-07-24 22:29:08] 2025-07-24 18:30:11,856 | INFO     | overall cleanup function is called
[2025-07-24 22:29:08] 2025-07-24 18:30:12,865 | INFO     | --- collectZombieJob: --- 10, [10936]
[2025-07-24 22:29:08] 2025-07-24 18:30:12,865 | INFO     | zombie collector waiting for pid 10936
[2025-07-24 22:29:08] 2025-07-24 18:30:12,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 22:29:08] 2025-07-24 18:30:12,865 | INFO     | collected zombie processes
[2025-07-24 22:29:08] 2025-07-24 18:30:12,865 | INFO     | will attempt to kill all subprocesses of pid=10936
[2025-07-24 22:29:08] 2025-07-24 18:30:12,999 | INFO     | process IDs to be killed: [10936] (in reverse order)
[2025-07-24 22:29:08] 2025-07-24 18:30:13,841 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 22:29:08] 2025-07-24 18:30:13,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 22:29:08] 2025-07-24 18:30:13,844 | INFO     | did not find any defunct processes belonging to 10936
[2025-07-24 22:29:08] 2025-07-24 18:30:13,847 | INFO     | did not find any defunct processes belonging to 10936
[2025-07-24 22:29:08] 2025-07-24 18:30:13,847 | INFO     | ready for new job
[2025-07-24 22:29:08] 2025-07-24 18:30:13,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 22:29:08] 2025-07-24 18:30:13,850 | INFO     | ***************************************
[2025-07-24 22:29:08] 2025-07-24 18:30:13,850 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 22:29:08] 2025-07-24 18:30:13,850 | INFO     | ***************************************
[2025-07-24 22:29:08] 2025-07-24 18:30:13,850 | INFO     | 
[2025-07-24 22:29:08] 2025-07-24 18:30:13,851 | INFO     | pilot is running in a VM
[2025-07-24 22:29:08] 2025-07-24 18:30:13,851 | INFO     | architecture information:
[2025-07-24 22:29:08] 2025-07-24 18:30:13,863 | INFO     | executing command: cat /etc/os-release
[2025-07-24 22:29:08] 2025-07-24 18:30:14,078 | INFO     | cat /etc/os-release:
[2025-07-24 22:29:08] NAME="CentOS Linux"
[2025-07-24 22:29:08] VERSION="7 (Core)"
[2025-07-24 22:29:08] ID="centos"
[2025-07-24 22:29:08] ID_LIKE="rhel fedora"
[2025-07-24 22:29:08] VERSION_ID="7"
[2025-07-24 22:29:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 22:29:08] ANSI_COLOR="0;31"
[2025-07-24 22:29:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 22:29:08] HOME_URL="https://www.centos.org/"
[2025-07-24 22:29:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 22:29:08] 
[2025-07-24 22:29:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 22:29:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 22:29:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 22:29:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 22:29:08] 
[2025-07-24 22:29:08] 2025-07-24 18:30:14,079 | INFO     | ***************************************
[2025-07-24 22:29:08] 2025-07-24 18:30:14,582 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-07-24 22:29:08] 2025-07-24 18:30:14,774 | INFO     | sufficient remaining disk space (496610836480 B)
[2025-07-24 22:29:08] 2025-07-24 18:30:14,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 22:29:08] 2025-07-24 18:30:14,774 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 22:29:08] 2025-07-24 18:30:14,774 | INFO     | update_server=False
[2025-07-24 22:29:08] 2025-07-24 18:30:14,774 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 22:29:08] 2025-07-24 18:30:14,820 | INFO     | all job control threads have been joined
[2025-07-24 22:29:08] 2025-07-24 18:30:14,903 | INFO     | all payload control threads have been joined
[2025-07-24 22:29:08] 2025-07-24 18:30:15,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 22:29:08] 2025-07-24 18:30:15,433 | INFO     | all data control threads have been joined
[2025-07-24 22:29:08] 2025-07-24 18:30:15,772 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 22:29:08] 2025-07-24 18:30:15,772 | INFO     | aborting loop
[2025-07-24 22:29:08] 2025-07-24 18:30:15,781 | INFO     | [job] retrieve thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:15,797 | INFO     | [data] copytool_in thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:15,804 | INFO     | [payload] failed_post thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:15,826 | INFO     | [job] control thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:15,910 | INFO     | [payload] control thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:15,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 22:29:08] 2025-07-24 18:30:16,273 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:16,439 | INFO     | [data] control thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:16,477 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:16,522 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 22:29:08] 2025-07-24 18:30:16,778 | INFO     | [job] job monitor thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:16,893 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:16,919 | INFO     | [payload] validate_post thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:17,032 | INFO     | [data] copytool_out thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:17,039 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:17,115 | INFO     | [job] validate thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:17,528 | INFO     | [job] queue monitor thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:19,978 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 22:29:08] 2025-07-24 18:30:20,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460111963968)>', '<ExcThread(monitor, started 140459431151360)>']
[2025-07-24 22:29:08] 2025-07-24 18:30:25,129 | INFO     | all workflow threads have been joined
[2025-07-24 22:29:08] 2025-07-24 18:30:25,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 22:29:08] 2025-07-24 18:30:25,129 | INFO     | traces error code: 0
[2025-07-24 22:29:08] 2025-07-24 18:30:25,129 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 22:29:08] 2025-07-24 18:30:43,603 | INFO     | PID=4322 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-24 22:29:08] 2025-07-24 18:30:43,603 | INFO     | .. there are 9 such processes running
[2025-07-24 22:29:08] 2025-07-24 18:30:43,603 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 22:29:08] 2025-07-24 18:30:43,603 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 22:29:08] 2025-07-24 18:30:43,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 22:29:08] 2025-07-24 18:30:43,604 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 22:29:08] 2025-07-24 18:30:43,604 | CRITICAL | thread 'MainThread' is not alive
[2025-07-24 22:29:08] 2025-07-24 18:30:43,604 | INFO     | [monitor] control thread has ended
[2025-07-24 22:29:08] 2025-07-24 18:30:43,861 [wrapper] ==== pilot stdout END ====
[2025-07-24 22:29:08] 2025-07-24 18:30:43,870 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 22:29:08] 2025-07-24 18:30:43,878 [wrapper] pilotpid: 4322
[2025-07-24 22:29:08] 2025-07-24 18:30:43,881 [wrapper] Pilot exit status: 0
[2025-07-24 22:29:08] 2025-07-24 18:30:44,219 [wrapper] pandaids: 6744422290
[2025-07-24 22:29:08] 2025-07-24 18:30:45,103 [wrapper] cleanup supervisor_pilot 16811 4323
[2025-07-24 22:29:08] 2025-07-24 18:30:45,169 [wrapper] Test setup, not cleaning
[2025-07-24 22:29:08] 2025-07-24 18:30:45,267 [wrapper] apfmon messages muted
[2025-07-24 22:29:08] 2025-07-24 18:30:45,346 [wrapper] ==== wrapper stdout END ====
[2025-07-24 22:29:08] 2025-07-24 18:30:45,449 [wrapper] ==== wrapper stderr END ====
[2025-07-24 22:29:08]  *** Error codes and diagnostics ***
[2025-07-24 22:29:08]     "exeErrorCode": 0,
[2025-07-24 22:29:08]     "exeErrorDiag": "",
[2025-07-24 22:29:08]     "pilotErrorCode": 0,
[2025-07-24 22:29:08]     "pilotErrorDiag": "",
[2025-07-24 22:29:08]  *** Listing of results directory ***
[2025-07-24 22:29:08] total 475344
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc    530466 Jul 24 09:22 pilot3.tar.gz
[2025-07-24 22:29:08] -rwx------. 1 boinc boinc     36292 Jul 24 09:45 runpilot2-wrapper.sh
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc      5112 Jul 24 09:45 queuedata.json
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc       100 Jul 24 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 22:29:08] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 15:28 run_atlas
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc       105 Jul 24 15:28 job.xml
[2025-07-24 22:29:08] -rw-r--r--. 2 boinc boinc 279570944 Jul 24 15:28 EVNT.45668898._000024.pool.root.1
[2025-07-24 22:29:08] -rw-r--r--. 2 boinc boinc     15095 Jul 24 15:28 start_atlas.sh
[2025-07-24 22:29:08] drwxrwx--x. 2 boinc boinc        68 Jul 24 15:28 shared
[2025-07-24 22:29:08] -rw-r--r--. 2 boinc boinc    542871 Jul 24 15:28 input.tar.gz
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc      6390 Jul 24 15:28 init_data.xml
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc         0 Jul 24 15:28 boinc_lockfile
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc      2537 Jul 24 15:28 pandaJob.out
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc    979653 Jul 24 15:28 agis_schedconf.cvmfs.json
[2025-07-24 22:29:08] drwx------. 4 boinc boinc      4096 Jul 24 15:28 pilot3
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc 199399690 Jul 24 20:27 HITS.45668900._000592.pool.root.1
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc       531 Jul 24 20:27 boinc_task_state.xml
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc      1032 Jul 24 20:28 memory_monitor_summary.json
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc   1593052 Jul 24 20:28 agis_ddmendpoints.agis.ALL.json
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc    411563 Jul 24 20:28 log.45668900._000592.job.log.tgz.1
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc        95 Jul 24 20:29 pilot_heartbeat.json
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc      7771 Jul 24 20:30 heartbeat.json
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc       889 Jul 24 20:30 pilotlog.txt
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc   1550505 Jul 24 20:30 log.45668900._000592.job.log.1
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc       357 Jul 24 20:30 output.list
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc       620 Jul 24 20:30 runtime_log
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc   1976320 Jul 24 20:30 result.tar.gz
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc      8660 Jul 24 20:30 runtime_log.err
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc       657 Jul 24 20:30 m7MNDmQp5y7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm28LLDmypnuEm.diag
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc      8192 Jul 24 22:29 boinc_mmap_file
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc        28 Jul 24 22:29 wrapper_checkpoint.txt
[2025-07-24 22:29:08] -rw-r--r--. 1 boinc boinc     20583 Jul 24 22:29 stderr.txt
[2025-07-24 22:29:08] HITS file was successfully produced:
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc 199399690 Jul 24 20:27 shared/HITS.pool.root.1
[2025-07-24 22:29:08]  *** Contents of shared directory: ***
[2025-07-24 22:29:08] total 470228
[2025-07-24 22:29:08] -rw-r--r--. 2 boinc boinc 279570944 Jul 24 15:28 ATLAS.root_0
[2025-07-24 22:29:08] -rw-r--r--. 2 boinc boinc     15095 Jul 24 15:28 start_atlas.sh
[2025-07-24 22:29:08] -rw-r--r--. 2 boinc boinc    542871 Jul 24 15:28 input.tar.gz
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc 199399690 Jul 24 20:27 HITS.pool.root.1
[2025-07-24 22:29:08] -rw-------. 1 boinc boinc   1976320 Jul 24 20:30 result.tar.gz
22:29:10 (547): run_atlas exited; CPU time 69369.063468
22:29:10 (547): called boinc_finish(0)

</stderr_txt>
]]>

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