Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-07-24 07:15:39 (29156): Detected: vboxwrapper 26206
2025-07-24 07:15:39 (29156): Detected: BOINC client v8.0.2
2025-07-24 07:15:39 (29156): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-07-24 07:15:39 (29156): Successfully copied 'init_data.xml' to the shared directory.
2025-07-24 07:15:40 (29156): Create VM. (boinc_710990a06764eefd, slot#0)
2025-07-24 07:15:40 (29156): Setting Memory Size for VM. (4800MB)
2025-07-24 07:15:41 (29156): Setting CPU Count for VM. (8)
2025-07-24 07:15:41 (29156): Setting Chipset Options for VM.
2025-07-24 07:15:41 (29156): Setting Graphics Controller Options for VM.
2025-07-24 07:15:41 (29156): Setting Boot Options for VM.
2025-07-24 07:15:42 (29156): Setting Network Configuration for NAT.
2025-07-24 07:15:42 (29156): Enabling VM Network Access.
2025-07-24 07:15:42 (29156): Disabling USB Support for VM.
2025-07-24 07:15:42 (29156): Disabling COM Port Support for VM.
2025-07-24 07:15:43 (29156): Disabling LPT Port Support for VM.
2025-07-24 07:15:43 (29156): Disabling Audio Support for VM.
2025-07-24 07:15:43 (29156): Disabling Clipboard Support for VM.
2025-07-24 07:15:43 (29156): Disabling Drag and Drop Support for VM.
2025-07-24 07:15:44 (29156): Adding storage controller(s) to VM.
2025-07-24 07:15:44 (29156): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-07-24 07:15:47 (29156): Adding VirtualBox Guest Additions to VM.
2025-07-24 07:15:47 (29156): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-07-24 07:15:47 (29156): forwarding host port 61717 to guest port 80
2025-07-24 07:15:48 (29156): Enabling remote desktop for VM.
2025-07-24 07:15:48 (29156): Required extension pack not installed, remote desktop not enabled.
2025-07-24 07:15:48 (29156): Enabling shared directory for VM.
2025-07-24 07:15:48 (29156): Starting VM using VBoxManage interface. (boinc_710990a06764eefd, slot#0)
2025-07-24 07:15:55 (29156): Successfully started VM. (PID = '33608')
2025-07-24 07:15:55 (29156): Reporting VM Process ID to BOINC.
2025-07-24 07:15:55 (29156): Guest Log: BIOS: VirtualBox 7.1.4
2025-07-24 07:15:55 (29156): Guest Log: CPUID EDX: 0x178bfbff
2025-07-24 07:15:55 (29156): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-07-24 07:15:55 (29156): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-07-24 07:15:55 (29156): VM state change detected. (old = 'poweredoff', new = 'running')
2025-07-24 07:15:55 (29156): Detected: Web Application Enabled (http://localhost:61717)
2025-07-24 07:15:55 (29156): Preference change detected
2025-07-24 07:15:55 (29156): Setting CPU throttle for VM. (100%)
2025-07-24 07:15:55 (29156): Setting network throttle for VM. (1024KB)
2025-07-24 07:15:55 (29156): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-07-24 07:15:57 (29156): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-07-24 07:15:57 (29156): Guest Log: BIOS: Booting from Hard Disk...
2025-07-24 07:16:00 (29156): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-07-24 07:16:00 (29156): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-07-24 07:16:00 (29156): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-07-24 07:16:05 (29156): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-07-24 07:16:05 (29156): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-07-24 07:16:12 (29156): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.000185 main     Log opened 2025-07-24T07:16:11.164796000Z
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.000456 main     OS Product: Linux
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.000494 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.000521 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.000576 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.000577 main     Process ID: 1373
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.000577 main     Package type: LINUX_64BITS_GENERIC
2025-07-24 07:16:12 (29156): Guest Log: 00:00:00.002152 main     5.2.32 r132073 started. Verbose level = 0
2025-07-24 07:16:12 (29156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-07-24 07:16:12 (29156): Guest Log: [INFO] Mounting shared directory
2025-07-24 07:16:13 (29156): Guest Log: [INFO] Checking for init_data.xml
2025-07-24 07:16:16 (29156): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-07-24 07:16:16 (29156): Guest Log: [INFO] Detected branch: prod
2025-07-24 07:16:17 (29156): Guest Log: This is the prod version of the ATLAS job wrapper
2025-07-24 07:16:17 (29156): Guest Log: Copying input files
2025-07-24 07:16:19 (29156): Guest Log: Copied input files into RunAtlas.
2025-07-24 07:16:19 (29156): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.3:3128 - will set in /etc/cvmfs/default.local
2025-07-24 07:16:22 (29156): Guest Log: 00:00:10.017241 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 410 590 906 000ns (GuestNow=1 753 355 781 759 347 000 ns GuestLast=1 753 341 371 168 441 000 ns fSetTimeLastLoop=true )
2025-07-24 07:16:33 (29156): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-07-24 07:16:33 (29156): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-07-24 07:16:33 (29156): Guest Log: 2.6.3.0 1653 0 29580 148697 4 1 3117619 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.3:3128 1
2025-07-24 07:16:34 (29156): Guest Log: copied the webapp to /var/www
2025-07-24 07:16:34 (29156): Guest Log: ATHENA_PROC_NUMBER=8
2025-07-24 07:16:34 (29156): Guest Log: ATHENA_CORE_NUMBER=8
2025-07-24 07:16:34 (29156): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-07-24 07:16:34 (29156): Guest Log:  *** Starting ATLAS job. (PandaID=6743950685 taskID=45697490) ***
2025-07-24 08:55:58 (29156): Status Report: Elapsed Time: '6000.000000'
2025-07-24 08:55:58 (29156): Status Report: CPU Time: '43375.250000'
2025-07-24 09:20:47 (29156): Guest Log:  *** Job finished ***
2025-07-24 09:20:47 (29156): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:31,194 | INFO     | all workflow threads have been joined
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:31,194 | INFO     | end of generic workflow (traces error code: 0)
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:31,194 | INFO     | traces error code: 0
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:31,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:42,948 | INFO     | PID=6013 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:42,948 | INFO     | found 0 job(s) in 20 queues
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:42,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:42,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:42,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:42,948 | INFO     | [monitor] control thread has ended
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,046 [wrapper] ==== pilot stdout END ====
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,051 [wrapper] ==== wrapper stdout RESUME ====
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,057 [wrapper] pilotpid: 6013
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,064 [wrapper] Pilot exit status: 0
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,171 [wrapper] pandaids: 6743950685
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,210 [wrapper] cleanup supervisor_pilot  5260 6014
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,216 [wrapper] Test setup, not cleaning
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,224 [wrapper] apfmon messages muted
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,230 [wrapper] ==== wrapper stdout END ====
2025-07-24 09:20:47 (29156): Guest Log: 2025-07-24 13:20:43,237 [wrapper] ==== wrapper stderr END ====
2025-07-24 09:20:47 (29156): Guest Log:  *** Error codes and diagnostics ***
2025-07-24 09:20:47 (29156): Guest Log:     "exeErrorCode": 0,
2025-07-24 09:20:47 (29156): Guest Log:     "exeErrorDiag": "",
2025-07-24 09:20:47 (29156): Guest Log:     "pilotErrorCode": 0,
2025-07-24 09:20:47 (29156): Guest Log:     "pilotErrorDiag": "",
2025-07-24 09:20:47 (29156): Guest Log:  *** Listing of results directory ***
2025-07-24 09:20:47 (29156): Guest Log: total 309532
2025-07-24 09:20:47 (29156): Guest Log: -rw-r--r--. 1 atlas atlas    530466 Jul 23 20:45 pilot3.tar.gz
2025-07-24 09:20:47 (29156): Guest Log: -rwx------. 1 atlas atlas     36292 Jul 23 21:35 runpilot2-wrapper.sh
2025-07-24 09:20:47 (29156): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jul 23 21:35 queuedata.json
2025-07-24 09:20:47 (29156): Guest Log: -rwxr-xr-x. 1 atlas atlas    542908 Jul 24 11:16 input.tar.gz
2025-07-24 09:20:47 (29156): Guest Log: -rwxr-xr-x. 1 atlas atlas      9304 Jul 24 11:16 init_data.xml
2025-07-24 09:20:47 (29156): Guest Log: -rwxr-xr-x. 1 atlas atlas     15095 Jul 24 11:16 start_atlas.sh
2025-07-24 09:20:47 (29156): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jul 24 11:16 EVNT.45697488._000076.pool.root.1 -> /data/./ATLAS.root_0
2025-07-24 09:20:47 (29156): Guest Log: -rw-r--r--. 1 atlas atlas      2590 Jul 24 11:16 pandaJob.out
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas    978907 Jul 24 11:17 agis_schedconf.cvmfs.json
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas   1593041 Jul 24 11:17 agis_ddmendpoints.agis.ALL.json
2025-07-24 09:20:47 (29156): Guest Log: drwx------. 4 atlas atlas      4096 Jul 24 11:17 pilot3
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas 311233009 Jul 24 13:19 HITS.45697490._006362.pool.root.1
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas        95 Jul 24 13:19 pilot_heartbeat.json
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas      1038 Jul 24 13:19 memory_monitor_summary.json
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas    320668 Jul 24 13:19 log.45697490._006362.job.log.tgz.1
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas      7781 Jul 24 13:20 heartbeat.json
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas       744 Jul 24 13:20 pilotlog.txt
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas    640690 Jul 24 13:20 log.45697490._006362.job.log.1
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas       357 Jul 24 13:20 output.list
2025-07-24 09:20:47 (29156): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jul 24 13:20 runtime_log
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas    983040 Jul 24 13:20 result.tar.gz
2025-07-24 09:20:47 (29156): Guest Log: -rw-r--r--. 1 atlas atlas      8592 Jul 24 13:20 runtime_log.err
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas       656 Jul 24 13:20 Q2zKDmPIwy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm12LLDmqQtszm.diag
2025-07-24 09:20:47 (29156): Guest Log: Looking for outputfile HITS.45697490._006362.pool.root.1
2025-07-24 09:20:47 (29156): Guest Log: HITS file was successfully produced
2025-07-24 09:20:47 (29156): Guest Log: -rw-------. 1 atlas atlas 311233009 Jul 24 13:19 /home/atlas/RunAtlas/HITS.45697490._006362.pool.root.1
2025-07-24 09:20:49 (29156): Guest Log: Successfully finished the ATLAS job!
2025-07-24 09:20:49 (29156): Guest Log: Copying the results back to the shared directory!
2025-07-24 09:20:49 (29156): Guest Log:  *** Contents of shared directory: ***
2025-07-24 09:20:49 (29156): Guest Log: total 643228
2025-07-24 09:20:49 (29156): Guest Log: -rwxrwxrwx. 1 root root 345873614 Jul 24 11:15 ATLAS.root_0
2025-07-24 09:20:49 (29156): Guest Log: -rwxrwxrwx. 1 root root 311233009 Jul 24  2025 HITS.pool.root.1
2025-07-24 09:20:49 (29156): Guest Log: -rwxrwxrwx. 1 root root      9304 Jul 24 11:15 init_data.xml
2025-07-24 09:20:49 (29156): Guest Log: -rwxrwxrwx. 1 root root    542908 Jul 24 05:35 input.tar.gz
2025-07-24 09:20:49 (29156): Guest Log: -rwxrwxrwx. 1 root root    983040 Jul 24  2025 result.tar.gz
2025-07-24 09:20:49 (29156): Guest Log: -rwxrwxrwx. 1 root root     15095 Jul 24 05:35 start_atlas.sh
2025-07-24 09:20:49 (29156): Guest Log:  *** Success! Shutting down the machine. ***
2025-07-24 09:20:49 (29156): VM Completion File Detected.
2025-07-24 09:20:49 (29156): Powering off VM.
2025-07-24 09:20:50 (29156): Successfully stopped VM.
2025-07-24 09:20:50 (29156): Deregistering VM. (boinc_710990a06764eefd, slot#0)
2025-07-24 09:20:50 (29156): Removing network bandwidth throttle group from VM.
2025-07-24 09:20:50 (29156): Removing VM from VirtualBox.
09:20:56 (29156): called boinc_finish(0)

</stderr_txt>
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