Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:28:10 (935523): wrapper (7.7.26015): starting
03:28:10 (935523): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 03:28:10] Arguments: --nthreads 12
[2025-07-24 03:28:10] Threads: 12
[2025-07-24 03:28:10] Checking for CVMFS
[2025-07-24 03:28:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 03:28:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 03:28:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 03:28:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 03:28:11] 2.12.6.0 2624825 13744 326616 148686 3 173 25645609 40960000 17168 16776704 0 32438444 99.760 41002383 32208 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-24 03:28:11] CVMFS is ok
[2025-07-24 03:28:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 03:28:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 03:28:11] Further information can be found at the LHC@home message board.
[2025-07-24 03:28:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 03:28:11] Checking for apptainer binary...
[2025-07-24 03:28:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 03:28:11] Running /usr/bin/apptainer --version
[2025-07-24 03:28:11] apptainer version 1.4.1-1.el9
[2025-07-24 03:28:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 03:28:12] c6-8-12-1.aglt2.org
[2025-07-24 03:28:12] apptainer works
[2025-07-24 03:28:12] Set ATHENA_PROC_NUMBER=12
[2025-07-24 03:28:12] Set ATHENA_CORE_NUMBER=12
[2025-07-24 03:28:12] Starting ATLAS job with PandaID=6743233134
[2025-07-24 03:28:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 05:14:06]  *** The last 200 lines of the pilot log: ***
[2025-07-24 05:14:06] 2025-07-24 09:13:44,671 | INFO     | monitor loop #416: job 0:6743233134 is in state 'finished'
[2025-07-24 05:14:06] 2025-07-24 09:13:44,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,163 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-24 05:14:06] 2025-07-24 09:13:45,171 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3011.313642857143
[2025-07-24 05:14:06] 2025-07-24 09:13:45,179 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743233134/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,180 | INFO     | extracted standard info from prmon json
[2025-07-24 05:14:06] 2025-07-24 09:13:45,180 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 05:14:06] 2025-07-24 09:13:45,180 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 05:14:06] 2025-07-24 09:13:45,181 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 05:14:06] 2025-07-24 09:13:45,181 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 05:14:06] 2025-07-24 09:13:45,183 | INFO     | fitting pss+swap vs Time
[2025-07-24 05:14:06] 2025-07-24 09:13:45,183 | INFO     | sum of square deviations: 338781565.0291265
[2025-07-24 05:14:06] 2025-07-24 09:13:45,184 | INFO     | sum of deviations: -11647662727.592232
[2025-07-24 05:14:06] 2025-07-24 09:13:45,184 | INFO     | mean x: 1753345268.0970874
[2025-07-24 05:14:06] 2025-07-24 09:13:45,184 | INFO     | mean y: 2505601.359223301
[2025-07-24 05:14:06] 2025-07-24 09:13:45,184 | INFO     | -- intersect: 60284340376.10222
[2025-07-24 05:14:06] 2025-07-24 09:13:45,184 | INFO     | intersect: 60284340376.10222
[2025-07-24 05:14:06] 2025-07-24 09:13:45,184 | INFO     | chi2: 1.8326669551453352
[2025-07-24 05:14:06] 2025-07-24 09:13:45,184 | INFO     | sum of square deviations: 291797687.4795911
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | sum of deviations: -8749981252.469395
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | mean x: 1753345115.6020408
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | mean y: 2514934.3469387754
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | -- intersect: 52579137535.92144
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | intersect: 52579137535.92144
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | chi2: 1.8330042769710526
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | current chi2=1.8330042769710526 (change=-0.018406062529276627 %)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | right removable region: 97
[2025-07-24 05:14:06] 2025-07-24 09:13:45,185 | INFO     | sum of square deviations: 291791587.4795911
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | sum of deviations: -27643500193.357132
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | mean x: 1753345420.6020408
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | mean y: 2556488.785714286
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | -- intersect: 166109485383.1097
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | intersect: 166109485383.1097
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | chi2: 0.2163787809766726
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | current chi2=0.2163787809766726 (change=88.19322952437295 %)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | sum of square deviations: 249371911.3118274
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | sum of deviations: -26112907378.07527
[2025-07-24 05:14:06] 2025-07-24 09:13:45,186 | INFO     | mean x: 1753345573.0860214
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | mean y: 2550941.634408602
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | -- intersect: 183603624177.59216
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | intersect: 183603624177.59216
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | chi2: 0.1931217270107256
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | current chi2=0.1931217270107256 (change=10.748306216058353 %)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | left removable region: 20
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | sum of square deviations: 141525496.36363658
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | sum of deviations: -16977033943.000004
[2025-07-24 05:14:06] 2025-07-24 09:13:45,187 | INFO     | mean x: 1753345695.090909
[2025-07-24 05:14:06] 2025-07-24 09:13:45,188 | INFO     | mean y: 2539165.714285714
[2025-07-24 05:14:06] 2025-07-24 09:13:45,188 | INFO     | -- intersect: 210329371744.97455
[2025-07-24 05:14:06] 2025-07-24 09:13:45,188 | INFO     | intersect: 210329371744.97455
[2025-07-24 05:14:06] 2025-07-24 09:13:45,188 | INFO     | chi2: 0.175296908143681
[2025-07-24 05:14:06] 2025-07-24 09:13:45,188 | INFO     | -- intersect: 210329371744.97455
[2025-07-24 05:14:06] 2025-07-24 09:13:45,188 | INFO     | current memory leak: -119.96 B/s (using 77 data points, chi2=0.18)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,188 | INFO     | could have reported an average CPU frequency of 2831 MHz (7 samples)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | ..............................
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . Timing measurements:
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . get job = 0 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . initial setup = 3 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . payload setup = 12 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . stage-in = 0 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . payload execution = 6267 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . stage-out = 1 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | . log creation = 0 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,189 | INFO     | ..............................
[2025-07-24 05:14:06] 2025-07-24 09:13:45,269 | INFO     | 
[2025-07-24 05:14:06] 2025-07-24 09:13:45,269 | INFO     | job summary report
[2025-07-24 05:14:06] 2025-07-24 09:13:45,269 | INFO     | --------------------------------------------------
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | PanDA job id: 6743233134
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | task id: 45668900
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | errors: (none)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | pilot state: finished 
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | transexitcode: 0
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | exeerrorcode: 0
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | exeerrordiag: 
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | exitcode: 0
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | exitmsg: OK
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | cpuconsumptiontime: 55143 s
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | nevents: 400
[2025-07-24 05:14:06] 2025-07-24 09:13:45,270 | INFO     | neventsw: 0
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | pid: 946277
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | pgrp: 946277
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | corecount: 12
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | event service: False
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | sizes: {0: 2397421, 8: 2397683, 11: 2397711, 6283: 2424609, 6285: 2433663, 6290: 2433801}
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | --------------------------------------------------
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | 
[2025-07-24 05:14:06] 2025-07-24 09:13:45,271 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,291 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | job 6743233134 has completed (purged errors)
[2025-07-24 05:14:06] 2025-07-24 09:13:45,292 | INFO     | overall cleanup function is called
[2025-07-24 05:14:06] 2025-07-24 09:13:46,299 | INFO     | --- collectZombieJob: --- 10, [946277]
[2025-07-24 05:14:06] 2025-07-24 09:13:46,299 | INFO     | zombie collector waiting for pid 946277
[2025-07-24 05:14:06] 2025-07-24 09:13:46,299 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 05:14:06] 2025-07-24 09:13:46,299 | INFO     | collected zombie processes
[2025-07-24 05:14:06] 2025-07-24 09:13:46,299 | INFO     | will attempt to kill all subprocesses of pid=946277
[2025-07-24 05:14:06] 2025-07-24 09:13:46,878 | INFO     | PID=939334 has CPU usage=13.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 05:14:06] 2025-07-24 09:13:46,878 | INFO     | .. there are 20 such processes running
[2025-07-24 05:14:06] 2025-07-24 09:13:46,967 | INFO     | process IDs to be killed: [946277] (in reverse order)
[2025-07-24 05:14:06] 2025-07-24 09:13:47,074 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 05:14:06] 2025-07-24 09:13:47,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 05:14:06] 2025-07-24 09:13:47,086 | INFO     | did not find any defunct processes belonging to 946277
[2025-07-24 05:14:06] 2025-07-24 09:13:47,097 | INFO     | did not find any defunct processes belonging to 946277
[2025-07-24 05:14:06] 2025-07-24 09:13:47,097 | INFO     | ready for new job
[2025-07-24 05:14:06] 2025-07-24 09:13:47,098 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 05:14:06] 2025-07-24 09:13:47,100 | INFO     | ***************************************
[2025-07-24 05:14:06] 2025-07-24 09:13:47,100 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 05:14:06] 2025-07-24 09:13:47,100 | INFO     | ***************************************
[2025-07-24 05:14:06] 2025-07-24 09:13:47,100 | INFO     | 
[2025-07-24 05:14:06] 2025-07-24 09:13:47,115 | INFO     | architecture information:
[2025-07-24 05:14:06] 2025-07-24 09:13:47,116 | INFO     | executing command: cat /etc/os-release
[2025-07-24 05:14:06] 2025-07-24 09:13:47,131 | INFO     | cat /etc/os-release:
[2025-07-24 05:14:06] NAME="CentOS Linux"
[2025-07-24 05:14:06] VERSION="7 (Core)"
[2025-07-24 05:14:06] ID="centos"
[2025-07-24 05:14:06] ID_LIKE="rhel fedora"
[2025-07-24 05:14:06] VERSION_ID="7"
[2025-07-24 05:14:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 05:14:06] ANSI_COLOR="0;31"
[2025-07-24 05:14:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 05:14:06] HOME_URL="https://www.centos.org/"
[2025-07-24 05:14:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 05:14:06] 
[2025-07-24 05:14:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 05:14:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 05:14:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 05:14:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 05:14:06] 
[2025-07-24 05:14:06] 2025-07-24 09:13:47,131 | INFO     | ***************************************
[2025-07-24 05:14:06] 2025-07-24 09:13:47,634 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 05:14:06] 2025-07-24 09:13:47,655 | INFO     | sufficient remaining disk space (58446577664 B)
[2025-07-24 05:14:06] 2025-07-24 09:13:47,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 05:14:06] 2025-07-24 09:13:47,655 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 05:14:06] 2025-07-24 09:13:47,656 | INFO     | update_server=False
[2025-07-24 05:14:06] 2025-07-24 09:13:47,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 05:14:06] 2025-07-24 09:13:47,657 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-07-24 05:14:06] 2025-07-24 09:13:47,658 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 05:14:06] 2025-07-24 09:13:47,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 05:14:06] 2025-07-24 09:13:47,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 05:14:06] 2025-07-24 09:13:47,863 | INFO     | all data control threads have been joined
[2025-07-24 05:14:06] 2025-07-24 09:13:47,985 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 05:14:06] 2025-07-24 09:13:48,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:14:06] 2025-07-24 09:13:48,180 | INFO     | aborting loop
[2025-07-24 05:14:06] 2025-07-24 09:13:48,363 | INFO     | all job control threads have been joined
[2025-07-24 05:14:06] 2025-07-24 09:13:48,511 | INFO     | all payload control threads have been joined
[2025-07-24 05:14:06] 2025-07-24 09:13:48,663 | INFO     | [job] retrieve thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:48,711 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:48,866 | INFO     | [data] copytool_in thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:48,866 | INFO     | [data] control thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:48,876 | INFO     | [payload] validate_post thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:48,949 | INFO     | [job] validate thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:49,185 | INFO     | [job] job monitor thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:49,368 | INFO     | [job] control thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:49,505 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:49,516 | INFO     | [payload] control thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:49,667 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:49,767 | INFO     | [payload] failed_post thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:49,989 | INFO     | [data] copytool_out thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:50,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:14:06] 2025-07-24 09:13:50,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 05:14:06] 2025-07-24 09:13:51,285 | INFO     | [job] queue monitor thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:54,617 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:13:57,869 | INFO     | job.realtimelogging is not enabled
[2025-07-24 05:14:06] 2025-07-24 09:13:58,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 05:14:06] 2025-07-24 09:14:00,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139752381826880)>', '<ExcThread(monitor, started 139752011437824)>']
[2025-07-24 05:14:06] 2025-07-24 09:14:01,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 05:14:06] 2025-07-24 09:14:01,727 | INFO     | [monitor] control thread has ended
[2025-07-24 05:14:06] 2025-07-24 09:14:05,877 | INFO     | all workflow threads have been joined
[2025-07-24 05:14:06] 2025-07-24 09:14:05,877 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 05:14:06] 2025-07-24 09:14:05,878 | INFO     | traces error code: 0
[2025-07-24 05:14:06] 2025-07-24 09:14:05,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 05:14:06] 2025-07-24 09:14:06,082 [wrapper] ==== pilot stdout END ====
[2025-07-24 05:14:06] 2025-07-24 09:14:06,085 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 05:14:06] 2025-07-24 09:14:06,088 [wrapper] pilotpid: 939334
[2025-07-24 05:14:06] 2025-07-24 09:14:06,090 [wrapper] Pilot exit status: 0
[2025-07-24 05:14:06] 2025-07-24 09:14:06,103 [wrapper] pandaids: 6743233134
[2025-07-24 05:14:06] 2025-07-24 09:14:06,184 [wrapper] cleanup supervisor_pilot 1280286 939335
[2025-07-24 05:14:06] 2025-07-24 09:14:06,187 [wrapper] Test setup, not cleaning
[2025-07-24 05:14:06] 2025-07-24 09:14:06,190 [wrapper] apfmon messages muted
[2025-07-24 05:14:06] 2025-07-24 09:14:06,194 [wrapper] ==== wrapper stdout END ====
[2025-07-24 05:14:06] 2025-07-24 09:14:06,197 [wrapper] ==== wrapper stderr END ====
[2025-07-24 05:14:06]  *** Error codes and diagnostics ***
[2025-07-24 05:14:06]     "exeErrorCode": 0,
[2025-07-24 05:14:06]     "exeErrorDiag": "",
[2025-07-24 05:14:06]     "pilotErrorCode": 0,
[2025-07-24 05:14:06]     "pilotErrorDiag": "",
[2025-07-24 05:14:06]  *** Listing of results directory ***
[2025-07-24 05:14:06] total 465120
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 13:02 pilot3.tar.gz
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 13:05 queuedata.json
[2025-07-24 05:14:06] -rwx------. 1 boincer umatlas     36292 Jul 23 13:06 runpilot2-wrapper.sh
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas       100 Jul 24 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 05:14:06] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 24 03:28 run_atlas
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas       105 Jul 24 03:28 job.xml
[2025-07-24 05:14:06] -rw-r--r--. 2 boincer umatlas 276013301 Jul 24 03:28 EVNT.45668898._000018.pool.root.1
[2025-07-24 05:14:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 03:28 start_atlas.sh
[2025-07-24 05:14:06] drwxrwx--x. 2 boincer umatlas      4096 Jul 24 03:28 shared
[2025-07-24 05:14:06] -rw-r--r--. 2 boincer umatlas    542878 Jul 24 03:28 input.tar.gz
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas         0 Jul 24 03:28 boinc_lockfile
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas      2533 Jul 24 03:28 pandaJob.out
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas    978866 Jul 24 03:28 agis_schedconf.cvmfs.json
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas   1593041 Jul 24 03:28 agis_ddmendpoints.agis.ALL.json
[2025-07-24 05:14:06] drwx------. 4 boincer umatlas      4096 Jul 24 03:28 pilot3
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas      6842 Jul 24 05:11 init_data.xml
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas       530 Jul 24 05:13 boinc_task_state.xml
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas 194525968 Jul 24 05:13 HITS.45668900._000434.pool.root.1
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas        95 Jul 24 05:13 pilot_heartbeat.json
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas      1041 Jul 24 05:13 memory_monitor_summary.json
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas    365068 Jul 24 05:13 log.45668900._000434.job.log.tgz.1
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas      7820 Jul 24 05:13 heartbeat.json
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 05:14 boinc_mmap_file
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas        27 Jul 24 05:14 wrapper_checkpoint.txt
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas      4552 Jul 24 05:14 pilotlog.txt
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas    565324 Jul 24 05:14 log.45668900._000434.job.log.1
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas       357 Jul 24 05:14 output.list
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas       620 Jul 24 05:14 runtime_log
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas    952320 Jul 24 05:14 result.tar.gz
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas      8667 Jul 24 05:14 runtime_log.err
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas       653 Jul 24 05:14 edLODmA6ry7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm9yLLDmQFeHfn.diag
[2025-07-24 05:14:06] -rw-r--r--. 1 boincer umatlas     21196 Jul 24 05:14 stderr.txt
[2025-07-24 05:14:06] HITS file was successfully produced:
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas 194525968 Jul 24 05:13 shared/HITS.pool.root.1
[2025-07-24 05:14:06]  *** Contents of shared directory: ***
[2025-07-24 05:14:06] total 461000
[2025-07-24 05:14:06] -rw-r--r--. 2 boincer umatlas 276013301 Jul 24 03:28 ATLAS.root_0
[2025-07-24 05:14:06] -rw-r--r--. 2 boincer umatlas     15095 Jul 24 03:28 start_atlas.sh
[2025-07-24 05:14:06] -rw-r--r--. 2 boincer umatlas    542878 Jul 24 03:28 input.tar.gz
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas 194525968 Jul 24 05:13 HITS.pool.root.1
[2025-07-24 05:14:06] -rw-------. 1 boincer umatlas    952320 Jul 24 05:14 result.tar.gz
05:14:07 (935523): run_atlas exited; CPU time 55242.202147
05:14:07 (935523): called boinc_finish(0)

</stderr_txt>
]]>

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