Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:01:12 (2379): wrapper (7.7.26015): starting
22:01:12 (2379): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 22:01:12] Arguments: --nthreads 8
[2025-07-23 22:01:12] Threads: 8
[2025-07-23 22:01:12] Checking for CVMFS
[2025-07-23 22:01:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 22:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 22:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 22:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 22:01:13] 2.11.2.0 3213 511991 243436 148677 3 188 18757630 20275200 917 130560 0 170152151 99.988 22357184 19619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 22:01:13] CVMFS is ok
[2025-07-23 22:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 22:01:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 22:01:13] Further information can be found at the LHC@home message board.
[2025-07-23 22:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 22:01:13] Checking for apptainer binary...
[2025-07-23 22:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 22:01:13] Running /usr/bin/apptainer --version
[2025-07-23 22:01:13] apptainer version 1.3.2-1.el7
[2025-07-23 22:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 22:01:13] c-205-38.aglt2.org
[2025-07-23 22:01:13] apptainer works
[2025-07-23 22:01:13] Set ATHENA_PROC_NUMBER=8
[2025-07-23 22:01:13] Set ATHENA_CORE_NUMBER=8
[2025-07-23 22:01:13] Starting ATLAS job with PandaID=6741825430
[2025-07-23 22:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 23:24:41]  *** The last 200 lines of the pilot log: ***
[2025-07-23 23:24:41]  lfn=log.45697532._003785.job.log.tgz.1
[2025-07-23 23:24:41]  mtime=0
[2025-07-23 23:24:41]  protocol_id=None
[2025-07-23 23:24:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 23:24:41]  replicas=None
[2025-07-23 23:24:41]  scope=mc23_13p6TeV
[2025-07-23 23:24:41]  status=None
[2025-07-23 23:24:41]  status_code=0
[2025-07-23 23:24:41]  storage_token=
[2025-07-23 23:24:41]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6741825430/log.45697532._003785.job.log.tgz.1
[2025-07-23 23:24:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/1b/log.45697532._003785.job.log.tgz.1
[2025-07-23 23:24:41]  workdir=None
[2025-07-23 23:24:41] ]
[2025-07-23 23:24:41] 2025-07-24 03:24:03,872 | INFO     | transferring file log.45697532._003785.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6741825430/log.45697532._003785.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 23:24:41] 2025-07-24 03:24:03,872 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6741825430/log.45697532._003785.job.log.tgz.1 /tmp/boinchome/slots/0/log.45697532._003785.job
[2025-07-23 23:24:41] 2025-07-24 03:24:03,887 | INFO     | adding to output.list: log.45697532._003785.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/1b/log.45697532._003785.job.log.tg
[2025-07-23 23:24:41] 2025-07-24 03:24:03,888 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 23:24:41] 2025-07-24 03:24:03,888 | INFO     | summary of transferred files:
[2025-07-23 23:24:41] 2025-07-24 03:24:03,888 | INFO     |  -- lfn=log.45697532._003785.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 23:24:41] 2025-07-24 03:24:03,888 | INFO     | stage-out finished correctly
[2025-07-23 23:24:41] 2025-07-24 03:24:03,900 | INFO     | monitor loop #378: job 0:6741825430 is in state 'finished'
[2025-07-23 23:24:41] 2025-07-24 03:24:03,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 23:24:41] 2025-07-24 03:24:03,940 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 23:24:41] 2025-07-24 03:24:04,240 | INFO     | job 6741825430 has state=finished
[2025-07-23 23:24:41] 2025-07-24 03:24:04,240 | INFO     | preparing for final server update for job 6741825430 in state='finished'
[2025-07-23 23:24:41] 2025-07-24 03:24:04,241 | INFO     | this job has now completed (state=finished)
[2025-07-23 23:24:41] 2025-07-24 03:24:04,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 23:24:41] 2025-07-24 03:24:04,241 | INFO     | log transfer has been attempted: DONE
[2025-07-23 23:24:41] 2025-07-24 03:24:04,241 | INFO     | job 6741825430 has finished - writing final server update
[2025-07-23 23:24:41] 2025-07-24 03:24:04,241 | INFO     | total number of processed events: 400 (read)
[2025-07-23 23:24:41] 2025-07-24 03:24:04,242 | INFO     | executing command: lscpu
[2025-07-23 23:24:41] 2025-07-24 03:24:04,272 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 23:24:41] 2025-07-24 03:24:05,302 | INFO     | PID=6346 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-23 23:24:41] 2025-07-24 03:24:06,419 | INFO     | monitor loop #379: job 0:6741825430 is in state 'finished'
[2025-07-23 23:24:41] 2025-07-24 03:24:06,420 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 23:24:41] 2025-07-24 03:24:08,923 | INFO     | monitor loop #380: job 0:6741825430 is in state 'finished'
[2025-07-23 23:24:41] 2025-07-24 03:24:08,923 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 23:24:41] 2025-07-24 03:24:08,951 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 23:24:41] 2025-07-24 03:24:08,954 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1417.2115
[2025-07-23 23:24:41] 2025-07-24 03:24:08,958 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6741825430/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 23:24:41] 2025-07-24 03:24:08,959 | INFO     | extracted standard info from prmon json
[2025-07-23 23:24:41] 2025-07-24 03:24:08,959 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 23:24:41] 2025-07-24 03:24:08,959 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 23:24:41] 2025-07-24 03:24:08,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 23:24:41] 2025-07-24 03:24:08,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 23:24:41] 2025-07-24 03:24:08,961 | INFO     | fitting pss+swap vs Time
[2025-07-23 23:24:41] 2025-07-24 03:24:08,962 | INFO     | sum of square deviations: 125630262.5
[2025-07-23 23:24:41] 2025-07-24 03:24:08,962 | INFO     | sum of deviations: 895503576.5
[2025-07-23 23:24:41] 2025-07-24 03:24:08,962 | INFO     | mean x: 1753325034.5
[2025-07-23 23:24:41] 2025-07-24 03:24:08,962 | INFO     | mean y: 2578847.9594594594
[2025-07-23 23:24:41] 2025-07-24 03:24:08,963 | INFO     | -- intersect: -12495276429.241255
[2025-07-23 23:24:41] 2025-07-24 03:24:08,963 | INFO     | intersect: -12495276429.241255
[2025-07-23 23:24:41] 2025-07-24 03:24:08,963 | INFO     | chi2: 0.0014498267460855035
[2025-07-23 23:24:41] 2025-07-24 03:24:08,963 | INFO     | -- intersect: -12495276429.241255
[2025-07-23 23:24:41] 2025-07-24 03:24:08,963 | INFO     | current memory leak: 7.13 B/s (using 74 data points, chi2=0.00)
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | could have reported an average CPU frequency of 2704 MHz (6 samples)
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | ..............................
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | . Timing measurements:
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | . get job = 0 s
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | . initial setup = 2 s
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | . payload setup = 4 s
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | . stage-in = 0 s
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | . payload execution = 4940 s
[2025-07-23 23:24:41] 2025-07-24 03:24:08,964 | INFO     | . stage-out = 0 s
[2025-07-23 23:24:41] 2025-07-24 03:24:08,965 | INFO     | . log creation = 0 s
[2025-07-23 23:24:41] 2025-07-24 03:24:08,965 | INFO     | ..............................
[2025-07-23 23:24:41] 2025-07-24 03:24:09,044 | INFO     | 
[2025-07-23 23:24:41] 2025-07-24 03:24:09,044 | INFO     | job summary report
[2025-07-23 23:24:41] 2025-07-24 03:24:09,044 | INFO     | --------------------------------------------------
[2025-07-23 23:24:41] 2025-07-24 03:24:09,044 | INFO     | PanDA job id: 6741825430
[2025-07-23 23:24:41] 2025-07-24 03:24:09,044 | INFO     | task id: 45697532
[2025-07-23 23:24:41] 2025-07-24 03:24:09,044 | INFO     | errors: (none)
[2025-07-23 23:24:41] 2025-07-24 03:24:09,044 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | pilot state: finished 
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | transexitcode: 0
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | exeerrorcode: 0
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | exeerrordiag: 
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | exitcode: 0
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | exitmsg: OK
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | cpuconsumptiontime: 37051 s
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | nevents: 400
[2025-07-23 23:24:41] 2025-07-24 03:24:09,045 | INFO     | neventsw: 0
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | pid: 12766
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | pgrp: 12766
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | corecount: 8
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | event service: False
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | sizes: {0: 2396706, 1: 2397562, 3: 2397824, 12: 2397852, 4948: 2433266, 4949: 2433266, 4954: 2433588}
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | --------------------------------------------------
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | 
[2025-07-23 23:24:41] 2025-07-24 03:24:09,046 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 23:24:41] 2025-07-24 03:24:09,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,067 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 23:24:41] 2025-07-24 03:24:09,068 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 23:24:41] 2025-07-24 03:24:09,069 | INFO     | job 6741825430 has completed (purged errors)
[2025-07-23 23:24:41] 2025-07-24 03:24:09,069 | INFO     | overall cleanup function is called
[2025-07-23 23:24:41] 2025-07-24 03:24:10,077 | INFO     | --- collectZombieJob: --- 10, [12766]
[2025-07-23 23:24:41] 2025-07-24 03:24:10,077 | INFO     | zombie collector waiting for pid 12766
[2025-07-23 23:24:41] 2025-07-24 03:24:10,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 23:24:41] 2025-07-24 03:24:10,077 | INFO     | collected zombie processes
[2025-07-23 23:24:41] 2025-07-24 03:24:10,078 | INFO     | will attempt to kill all subprocesses of pid=12766
[2025-07-23 23:24:41] 2025-07-24 03:24:10,170 | INFO     | process IDs to be killed: [12766] (in reverse order)
[2025-07-23 23:24:41] 2025-07-24 03:24:10,214 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 23:24:41] 2025-07-24 03:24:10,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 23:24:41] 2025-07-24 03:24:10,216 | INFO     | did not find any defunct processes belonging to 12766
[2025-07-23 23:24:41] 2025-07-24 03:24:10,218 | INFO     | did not find any defunct processes belonging to 12766
[2025-07-23 23:24:41] 2025-07-24 03:24:10,218 | INFO     | ready for new job
[2025-07-23 23:24:41] 2025-07-24 03:24:10,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 23:24:41] 2025-07-24 03:24:10,219 | INFO     | ***************************************
[2025-07-23 23:24:41] 2025-07-24 03:24:10,219 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 23:24:41] 2025-07-24 03:24:10,219 | INFO     | ***************************************
[2025-07-23 23:24:41] 2025-07-24 03:24:10,219 | INFO     | 
[2025-07-23 23:24:41] 2025-07-24 03:24:10,220 | INFO     | architecture information:
[2025-07-23 23:24:41] 2025-07-24 03:24:10,221 | INFO     | executing command: cat /etc/os-release
[2025-07-23 23:24:41] 2025-07-24 03:24:10,232 | INFO     | cat /etc/os-release:
[2025-07-23 23:24:41] NAME="CentOS Linux"
[2025-07-23 23:24:41] VERSION="7 (Core)"
[2025-07-23 23:24:41] ID="centos"
[2025-07-23 23:24:41] ID_LIKE="rhel fedora"
[2025-07-23 23:24:41] VERSION_ID="7"
[2025-07-23 23:24:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 23:24:41] ANSI_COLOR="0;31"
[2025-07-23 23:24:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 23:24:41] HOME_URL="https://www.centos.org/"
[2025-07-23 23:24:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 23:24:41] 
[2025-07-23 23:24:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 23:24:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 23:24:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 23:24:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 23:24:41] 
[2025-07-23 23:24:41] 2025-07-24 03:24:10,232 | INFO     | ***************************************
[2025-07-23 23:24:41] 2025-07-24 03:24:10,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 23:24:41] 2025-07-24 03:24:10,751 | INFO     | sufficient remaining disk space (32989249536 B)
[2025-07-23 23:24:41] 2025-07-24 03:24:10,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 23:24:41] 2025-07-24 03:24:10,751 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 23:24:41] 2025-07-24 03:24:10,751 | INFO     | update_server=False
[2025-07-23 23:24:41] 2025-07-24 03:24:10,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 23:24:41] 2025-07-24 03:24:10,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 23:24:41] 2025-07-24 03:24:10,752 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 23:24:41] 2025-07-24 03:24:10,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 23:24:41] 2025-07-24 03:24:10,753 | INFO     | aborting loop
[2025-07-23 23:24:41] 2025-07-24 03:24:10,930 | INFO     | all data control threads have been joined
[2025-07-23 23:24:41] 2025-07-24 03:24:11,260 | INFO     | all payload control threads have been joined
[2025-07-23 23:24:41] 2025-07-24 03:24:11,535 | INFO     | all job control threads have been joined
[2025-07-23 23:24:41] 2025-07-24 03:24:11,757 | INFO     | [job] retrieve thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:11,758 | INFO     | [job] queue monitor thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:11,759 | INFO     | [job] job monitor thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:11,915 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:11,935 | INFO     | [data] control thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:11,951 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 23:24:41] 2025-07-24 03:24:12,061 | INFO     | [data] copytool_in thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:12,176 | INFO     | [job] validate thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:12,255 | INFO     | [payload] validate_post thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:12,264 | INFO     | [payload] control thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:12,382 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:12,492 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:12,540 | INFO     | [job] control thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:12,651 | INFO     | [payload] failed_post thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:13,173 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:13,956 | INFO     | [data] copytool_out thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:14,754 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 23:24:41] 2025-07-24 03:24:15,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140203347838784)>', '<ExcThread(monitor, started 140202689423104)>']
[2025-07-23 23:24:41] 2025-07-24 03:24:20,195 | INFO     | all workflow threads have been joined
[2025-07-23 23:24:41] 2025-07-24 03:24:20,195 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 23:24:41] 2025-07-24 03:24:20,196 | INFO     | traces error code: 0
[2025-07-23 23:24:41] 2025-07-24 03:24:20,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 23:24:41] 2025-07-24 03:24:41,494 | INFO     | PID=6346 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-23 23:24:41] 2025-07-24 03:24:41,494 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 23:24:41] 2025-07-24 03:24:41,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 23:24:41] 2025-07-24 03:24:41,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 23:24:41] 2025-07-24 03:24:41,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 23:24:41] 2025-07-24 03:24:41,494 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 23:24:41] 2025-07-24 03:24:41,494 | INFO     | [monitor] control thread has ended
[2025-07-23 23:24:41] 2025-07-24 03:24:41,588 [wrapper] ==== pilot stdout END ====
[2025-07-23 23:24:41] 2025-07-24 03:24:41,592 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 23:24:41] 2025-07-24 03:24:41,596 [wrapper] pilotpid: 6346
[2025-07-23 23:24:41] 2025-07-24 03:24:41,599 [wrapper] Pilot exit status: 0
[2025-07-23 23:24:41] 2025-07-24 03:24:41,612 [wrapper] pandaids: 6741825430
[2025-07-23 23:24:41] 2025-07-24 03:24:41,647 [wrapper] cleanup supervisor_pilot 10592 6347
[2025-07-23 23:24:41] 2025-07-24 03:24:41,650 [wrapper] Test setup, not cleaning
[2025-07-23 23:24:41] 2025-07-24 03:24:41,654 [wrapper] apfmon messages muted
[2025-07-23 23:24:41] 2025-07-24 03:24:41,658 [wrapper] ==== wrapper stdout END ====
[2025-07-23 23:24:41] 2025-07-24 03:24:41,661 [wrapper] ==== wrapper stderr END ====
[2025-07-23 23:24:41]  *** Error codes and diagnostics ***
[2025-07-23 23:24:41]     "exeErrorCode": 0,
[2025-07-23 23:24:41]     "exeErrorDiag": "",
[2025-07-23 23:24:41]     "pilotErrorCode": 0,
[2025-07-23 23:24:41]     "pilotErrorDiag": "",
[2025-07-23 23:24:41]  *** Listing of results directory ***
[2025-07-23 23:24:41] total 604092
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas    530466 Jul 21 19:55 pilot3.tar.gz
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas      5112 Jul 21 20:04 queuedata.json
[2025-07-23 23:24:41] -rwx------ 1 boincer umatlas     36292 Jul 21 20:04 runpilot2-wrapper.sh
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas       100 Jul 23 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 23:24:41] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 22:01 run_atlas
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas       105 Jul 23 22:01 job.xml
[2025-07-23 23:24:41] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 22:01 start_atlas.sh
[2025-07-23 23:24:41] drwxrwx--x 2 boincer umatlas      4096 Jul 23 22:01 shared
[2025-07-23 23:24:41] -rw-r--r-- 2 boincer umatlas    542903 Jul 23 22:01 input.tar.gz
[2025-07-23 23:24:41] -rw-r--r-- 2 boincer umatlas 329439003 Jul 23 22:01 EVNT.45697530._000152.pool.root.1
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas         0 Jul 23 22:01 boinc_lockfile
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas      2612 Jul 23 22:01 pandaJob.out
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas    979640 Jul 23 22:01 agis_schedconf.cvmfs.json
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas   1593041 Jul 23 22:01 agis_ddmendpoints.agis.ALL.json
[2025-07-23 23:24:41] drwx------ 4 boincer umatlas      4096 Jul 23 22:01 pilot3
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas      6050 Jul 23 23:18 init_data.xml
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas 283689172 Jul 23 23:23 HITS.45697532._003785.pool.root.1
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas       529 Jul 23 23:23 boinc_task_state.xml
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas        95 Jul 23 23:23 pilot_heartbeat.json
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas      1046 Jul 23 23:24 memory_monitor_summary.json
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas    307663 Jul 23 23:24 log.45697532._003785.job.log.tgz.1
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas      7829 Jul 23 23:24 heartbeat.json
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 23:24 boinc_mmap_file
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas        27 Jul 23 23:24 wrapper_checkpoint.txt
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas       814 Jul 23 23:24 pilotlog.txt
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas    484753 Jul 23 23:24 log.45697532._003785.job.log.1
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas       357 Jul 23 23:24 output.list
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas       620 Jul 23 23:24 runtime_log
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas    808960 Jul 23 23:24 result.tar.gz
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas      8660 Jul 23 23:24 runtime_log.err
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas       658 Jul 23 23:24 CvONDmWfFy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvRHLDmqCFPun.diag
[2025-07-23 23:24:41] -rw-r--r-- 1 boincer umatlas     21732 Jul 23 23:24 stderr.txt
[2025-07-23 23:24:41] HITS file was successfully produced:
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas 283689172 Jul 23 23:23 shared/HITS.pool.root.1
[2025-07-23 23:24:41]  *** Contents of shared directory: ***
[2025-07-23 23:24:41] total 600108
[2025-07-23 23:24:41] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 22:01 start_atlas.sh
[2025-07-23 23:24:41] -rw-r--r-- 2 boincer umatlas    542903 Jul 23 22:01 input.tar.gz
[2025-07-23 23:24:41] -rw-r--r-- 2 boincer umatlas 329439003 Jul 23 22:01 ATLAS.root_0
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas 283689172 Jul 23 23:23 HITS.pool.root.1
[2025-07-23 23:24:41] -rw------- 1 boincer umatlas    808960 Jul 23 23:24 result.tar.gz
23:24:43 (2379): run_atlas exited; CPU time 36891.137892
23:24:43 (2379): called boinc_finish(0)

</stderr_txt>
]]>

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