Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:41:52 (3392984): wrapper (7.7.26015): starting
21:41:52 (3392984): wrapper: running run_atlas (--nthreads 10)
[2025-07-23 21:41:52] Arguments: --nthreads 10
[2025-07-23 21:41:52] Threads: 10
[2025-07-23 21:41:52] Checking for CVMFS
[2025-07-23 21:41:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 21:41:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 21:41:52] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 21:41:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 21:41:52] 2.13.0.0 1448902 13414 297352 148677 0 68 17476997 21551104 8689 16776704 0 34355021 99.359 77112016 32069 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 21:41:52] CVMFS is ok
[2025-07-23 21:41:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 21:41:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 21:41:52] Further information can be found at the LHC@home message board.
[2025-07-23 21:41:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 21:41:52] Checking for apptainer binary...
[2025-07-23 21:41:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 21:41:52] Running /usr/bin/apptainer --version
[2025-07-23 21:41:53] apptainer version 1.4.1-1.el9
[2025-07-23 21:41:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 21:41:53] c-16-30.aglt2.org
[2025-07-23 21:41:53] apptainer works
[2025-07-23 21:41:53] Set ATHENA_PROC_NUMBER=10
[2025-07-23 21:41:53] Set ATHENA_CORE_NUMBER=10
[2025-07-23 21:41:53] Starting ATLAS job with PandaID=6743232134
[2025-07-23 21:41:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 08:47:37]  *** The last 200 lines of the pilot log: ***
[2025-07-24 08:47:37] 2025-07-24 12:47:01,483 | INFO     | monitor loop #2364: job 0:6743232134 is in state 'finished'
[2025-07-24 08:47:37] 2025-07-24 12:47:01,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 08:47:37] 2025-07-24 12:47:02,030 | INFO     | PID=3396577 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-24 08:47:37] 2025-07-24 12:47:02,030 | INFO     | .. there are 26 such processes running
[2025-07-24 08:47:37] 2025-07-24 12:47:03,449 | INFO     | CPU arch script returned: x86-64-v2
[2025-07-24 08:47:37] 2025-07-24 12:47:03,458 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9949750000005
[2025-07-24 08:47:37] 2025-07-24 12:47:03,466 | INFO     | using path: /var/lib/condor/boinchome/slots/0/PanDA_Pilot-6743232134/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,467 | INFO     | extracted standard info from prmon json
[2025-07-24 08:47:37] 2025-07-24 12:47:03,467 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 08:47:37] 2025-07-24 12:47:03,467 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 08:47:37] 2025-07-24 12:47:03,468 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 08:47:37] 2025-07-24 12:47:03,468 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 08:47:37] 2025-07-24 12:47:03,484 | INFO     | fitting pss+swap vs Time
[2025-07-24 08:47:37] 2025-07-24 12:47:03,485 | INFO     | sum of square deviations: 86737940838.92517
[2025-07-24 08:47:37] 2025-07-24 12:47:03,498 | INFO     | sum of deviations: -31731820819.278267
[2025-07-24 08:47:37] 2025-07-24 12:47:03,498 | INFO     | mean x: 1753341274.9892967
[2025-07-24 08:47:37] 2025-07-24 12:47:03,498 | INFO     | mean y: 2211858.960244648
[2025-07-24 08:47:37] 2025-07-24 12:47:03,498 | INFO     | -- intersect: 643646398.8500516
[2025-07-24 08:47:37] 2025-07-24 12:47:03,498 | INFO     | intersect: 643646398.8500516
[2025-07-24 08:47:37] 2025-07-24 12:47:03,499 | INFO     | chi2: 2.997771647681539
[2025-07-24 08:47:37] 2025-07-24 12:47:03,501 | INFO     | sum of square deviations: 84763796770.21852
[2025-07-24 08:47:37] 2025-07-24 12:47:03,513 | INFO     | sum of deviations: 17797891711.19721
[2025-07-24 08:47:37] 2025-07-24 12:47:03,514 | INFO     | mean x: 1753341122.4930663
[2025-07-24 08:47:37] 2025-07-24 12:47:03,514 | INFO     | mean y: 2215666.599383667
[2025-07-24 08:47:37] 2025-07-24 12:47:03,514 | INFO     | -- intersect: -365934140.5112459
[2025-07-24 08:47:37] 2025-07-24 12:47:03,514 | INFO     | intersect: -365934140.5112459
[2025-07-24 08:47:37] 2025-07-24 12:47:03,515 | INFO     | chi2: 2.289788607640226
[2025-07-24 08:47:37] 2025-07-24 12:47:03,515 | INFO     | current chi2=2.289788607640226 (change=23.616976983182273 %)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,516 | INFO     | right removable region: 648
[2025-07-24 08:47:37] 2025-07-24 12:47:03,517 | INFO     | sum of square deviations: 84763601570.21854
[2025-07-24 08:47:37] 2025-07-24 12:47:03,529 | INFO     | sum of deviations: -123827809043.75815
[2025-07-24 08:47:37] 2025-07-24 12:47:03,529 | INFO     | mean x: 1753341427.4930663
[2025-07-24 08:47:37] 2025-07-24 12:47:03,530 | INFO     | mean y: 2218950.164869029
[2025-07-24 08:47:37] 2025-07-24 12:47:03,530 | INFO     | -- intersect: 2563606426.0411134
[2025-07-24 08:47:37] 2025-07-24 12:47:03,530 | INFO     | intersect: 2563606426.0411134
[2025-07-24 08:47:37] 2025-07-24 12:47:03,531 | INFO     | chi2: 1.5625697735119446
[2025-07-24 08:47:37] 2025-07-24 12:47:03,531 | INFO     | current chi2=1.5625697735119446 (change=47.875623724694705 %)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,532 | INFO     | sum of square deviations: 82819448913.99399
[2025-07-24 08:47:37] 2025-07-24 12:47:03,545 | INFO     | sum of deviations: -120913833283.43799
[2025-07-24 08:47:37] 2025-07-24 12:47:03,545 | INFO     | mean x: 1753341579.9968944
[2025-07-24 08:47:37] 2025-07-24 12:47:03,545 | INFO     | mean y: 2218716.2810559007
[2025-07-24 08:47:37] 2025-07-24 12:47:03,545 | INFO     | -- intersect: 2562043181.0975814
[2025-07-24 08:47:37] 2025-07-24 12:47:03,546 | INFO     | intersect: 2562043181.0975814
[2025-07-24 08:47:37] 2025-07-24 12:47:03,547 | INFO     | chi2: 1.5350976062971657
[2025-07-24 08:47:37] 2025-07-24 12:47:03,547 | INFO     | current chi2=1.5350976062971657 (change=1.7581401919118111 %)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,547 | INFO     | left removable region: 20
[2025-07-24 08:47:37] 2025-07-24 12:47:03,548 | INFO     | sum of square deviations: 76798656982.9852
[2025-07-24 08:47:37] 2025-07-24 12:47:03,560 | INFO     | sum of deviations: -6142184623.667212
[2025-07-24 08:47:37] 2025-07-24 12:47:03,560 | INFO     | mean x: 1753341702.004777
[2025-07-24 08:47:37] 2025-07-24 12:47:03,561 | INFO     | mean y: 2217459.555732484
[2025-07-24 08:47:37] 2025-07-24 12:47:03,561 | INFO     | -- intersect: 142445802.92994276
[2025-07-24 08:47:37] 2025-07-24 12:47:03,561 | INFO     | intersect: 142445802.92994276
[2025-07-24 08:47:37] 2025-07-24 12:47:03,562 | INFO     | chi2: 0.6143976390381348
[2025-07-24 08:47:37] 2025-07-24 12:47:03,562 | INFO     | -- intersect: 142445802.92994276
[2025-07-24 08:47:37] 2025-07-24 12:47:03,563 | INFO     | current memory leak: -0.08 B/s (using 628 data points, chi2=0.61)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,564 | INFO     | could have reported an average CPU frequency of 2904 MHz (25 samples)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,564 | INFO     | ..............................
[2025-07-24 08:47:37] 2025-07-24 12:47:03,564 | INFO     | . Timing measurements:
[2025-07-24 08:47:37] 2025-07-24 12:47:03,564 | INFO     | . get job = 0 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,564 | INFO     | . initial setup = 3 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,564 | INFO     | . payload setup = 8 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,565 | INFO     | . stage-in = 0 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,565 | INFO     | . payload execution = 39845 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,565 | INFO     | . stage-out = 4 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,565 | INFO     | . log creation = 0 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,565 | INFO     | ..............................
[2025-07-24 08:47:37] 2025-07-24 12:47:03,795 | INFO     | 
[2025-07-24 08:47:37] 2025-07-24 12:47:03,795 | INFO     | job summary report
[2025-07-24 08:47:37] 2025-07-24 12:47:03,796 | INFO     | --------------------------------------------------
[2025-07-24 08:47:37] 2025-07-24 12:47:03,796 | INFO     | PanDA job id: 6743232134
[2025-07-24 08:47:37] 2025-07-24 12:47:03,796 | INFO     | task id: 45668889
[2025-07-24 08:47:37] 2025-07-24 12:47:03,796 | INFO     | errors: (none)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,796 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 08:47:37] 2025-07-24 12:47:03,796 | INFO     | pilot state: finished 
[2025-07-24 08:47:37] 2025-07-24 12:47:03,796 | INFO     | transexitcode: 0
[2025-07-24 08:47:37] 2025-07-24 12:47:03,797 | INFO     | exeerrorcode: 0
[2025-07-24 08:47:37] 2025-07-24 12:47:03,797 | INFO     | exeerrordiag: 
[2025-07-24 08:47:37] 2025-07-24 12:47:03,797 | INFO     | exitcode: 0
[2025-07-24 08:47:37] 2025-07-24 12:47:03,797 | INFO     | exitmsg: OK
[2025-07-24 08:47:37] 2025-07-24 12:47:03,797 | INFO     | cpuconsumptiontime: 114365 s
[2025-07-24 08:47:37] 2025-07-24 12:47:03,797 | INFO     | nevents: 400
[2025-07-24 08:47:37] 2025-07-24 12:47:03,797 | INFO     | neventsw: 0
[2025-07-24 08:47:37] 2025-07-24 12:47:03,798 | INFO     | pid: 3403261
[2025-07-24 08:47:37] 2025-07-24 12:47:03,798 | INFO     | pgrp: 3403261
[2025-07-24 08:47:37] 2025-07-24 12:47:03,798 | INFO     | corecount: 10
[2025-07-24 08:47:37] 2025-07-24 12:47:03,798 | INFO     | event service: False
[2025-07-24 08:47:37] 2025-07-24 12:47:03,798 | INFO     | sizes: {0: 2397259, 1: 2397458, 6: 2397720, 12: 2397748, 39858: 2440068, 39864: 2449088, 39865: 2449272, 39881: 2449530}
[2025-07-24 08:47:37] 2025-07-24 12:47:03,798 | INFO     | --------------------------------------------------
[2025-07-24 08:47:37] 2025-07-24 12:47:03,798 | INFO     | 
[2025-07-24 08:47:37] 2025-07-24 12:47:03,799 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/0
[2025-07-24 08:47:37] 2025-07-24 12:47:03,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,904 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,904 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,905 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,905 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,905 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,905 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,905 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,905 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 08:47:37] 2025-07-24 12:47:03,907 | INFO     | job 6743232134 has completed (purged errors)
[2025-07-24 08:47:37] 2025-07-24 12:47:03,907 | INFO     | overall cleanup function is called
[2025-07-24 08:47:37] 2025-07-24 12:47:04,916 | INFO     | --- collectZombieJob: --- 10, [3403261]
[2025-07-24 08:47:37] 2025-07-24 12:47:04,916 | INFO     | zombie collector waiting for pid 3403261
[2025-07-24 08:47:37] 2025-07-24 12:47:04,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 08:47:37] 2025-07-24 12:47:04,917 | INFO     | collected zombie processes
[2025-07-24 08:47:37] 2025-07-24 12:47:04,917 | INFO     | will attempt to kill all subprocesses of pid=3403261
[2025-07-24 08:47:37] 2025-07-24 12:47:05,775 | INFO     | process IDs to be killed: [3403261] (in reverse order)
[2025-07-24 08:47:37] 2025-07-24 12:47:05,885 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 08:47:37] 2025-07-24 12:47:05,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 08:47:37] 2025-07-24 12:47:05,903 | INFO     | did not find any defunct processes belonging to 3403261
[2025-07-24 08:47:37] 2025-07-24 12:47:05,938 | INFO     | did not find any defunct processes belonging to 3403261
[2025-07-24 08:47:37] 2025-07-24 12:47:05,939 | INFO     | ready for new job
[2025-07-24 08:47:37] 2025-07-24 12:47:05,939 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 08:47:37] 2025-07-24 12:47:05,941 | INFO     | ***************************************
[2025-07-24 08:47:37] 2025-07-24 12:47:05,941 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 08:47:37] 2025-07-24 12:47:05,942 | INFO     | ***************************************
[2025-07-24 08:47:37] 2025-07-24 12:47:05,942 | INFO     | 
[2025-07-24 08:47:37] 2025-07-24 12:47:05,962 | INFO     | architecture information:
[2025-07-24 08:47:37] 2025-07-24 12:47:05,963 | INFO     | executing command: cat /etc/os-release
[2025-07-24 08:47:37] 2025-07-24 12:47:06,043 | INFO     | cat /etc/os-release:
[2025-07-24 08:47:37] NAME="CentOS Linux"
[2025-07-24 08:47:37] VERSION="7 (Core)"
[2025-07-24 08:47:37] ID="centos"
[2025-07-24 08:47:37] ID_LIKE="rhel fedora"
[2025-07-24 08:47:37] VERSION_ID="7"
[2025-07-24 08:47:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 08:47:37] ANSI_COLOR="0;31"
[2025-07-24 08:47:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 08:47:37] HOME_URL="https://www.centos.org/"
[2025-07-24 08:47:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 08:47:37] 
[2025-07-24 08:47:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 08:47:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 08:47:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 08:47:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 08:47:37] 
[2025-07-24 08:47:37] 2025-07-24 12:47:06,044 | INFO     | ***************************************
[2025-07-24 08:47:37] 2025-07-24 12:47:06,547 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/0
[2025-07-24 08:47:37] 2025-07-24 12:47:06,605 | INFO     | sufficient remaining disk space (1804630753280 B)
[2025-07-24 08:47:37] 2025-07-24 12:47:06,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 08:47:37] 2025-07-24 12:47:06,605 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 08:47:37] 2025-07-24 12:47:06,605 | INFO     | update_server=False
[2025-07-24 08:47:37] 2025-07-24 12:47:06,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 08:47:37] 2025-07-24 12:47:06,787 | INFO     | all job control threads have been joined
[2025-07-24 08:47:37] 2025-07-24 12:47:06,850 | INFO     | all payload control threads have been joined
[2025-07-24 08:47:37] 2025-07-24 12:47:07,117 | INFO     | all data control threads have been joined
[2025-07-24 08:47:37] 2025-07-24 12:47:07,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 08:47:37] 2025-07-24 12:47:07,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 08:47:37] 2025-07-24 12:47:07,524 | INFO     | aborting loop
[2025-07-24 08:47:37] 2025-07-24 12:47:07,611 | INFO     | [job] retrieve thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:07,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 08:47:37] 2025-07-24 12:47:07,641 | INFO     | [payload] failed_post thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:07,795 | INFO     | [job] control thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:07,861 | INFO     | [payload] control thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:07,874 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:08,002 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:08,123 | INFO     | [data] control thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:08,530 | INFO     | [job] job monitor thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:08,536 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:08,563 | INFO     | [payload] validate_post thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:08,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 08:47:37] 2025-07-24 12:47:08,810 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:08,987 | INFO     | [job] validate thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:09,095 | INFO     | [data] copytool_in thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:09,620 | INFO     | [data] copytool_out thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:09,816 | INFO     | [job] queue monitor thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:11,481 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 08:47:37] 2025-07-24 12:47:12,948 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140684747323200)>', '<ExcThread(monitor, started 140684120020736)>']
[2025-07-24 08:47:37] 2025-07-24 12:47:17,974 | INFO     | all workflow threads have been joined
[2025-07-24 08:47:37] 2025-07-24 12:47:17,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 08:47:37] 2025-07-24 12:47:17,975 | INFO     | traces error code: 0
[2025-07-24 08:47:37] 2025-07-24 12:47:17,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 08:47:37] 2025-07-24 12:47:36,771 | INFO     | PID=3396577 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 08:47:37] 2025-07-24 12:47:36,771 | INFO     | .. there are 26 such processes running
[2025-07-24 08:47:37] 2025-07-24 12:47:36,772 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 08:47:37] 2025-07-24 12:47:36,772 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 08:47:37] 2025-07-24 12:47:36,772 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 08:47:37] 2025-07-24 12:47:36,772 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 08:47:37] 2025-07-24 12:47:36,773 | INFO     | [monitor] control thread has ended
[2025-07-24 08:47:37] 2025-07-24 12:47:36,937 [wrapper] ==== pilot stdout END ====
[2025-07-24 08:47:37] 2025-07-24 12:47:36,940 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 08:47:37] 2025-07-24 12:47:36,943 [wrapper] pilotpid: 3396577
[2025-07-24 08:47:37] 2025-07-24 12:47:36,946 [wrapper] Pilot exit status: 0
[2025-07-24 08:47:37] 2025-07-24 12:47:36,963 [wrapper] pandaids: 6743232134
[2025-07-24 08:47:37] 2025-07-24 12:47:37,057 [wrapper] cleanup supervisor_pilot  472219 3396578
[2025-07-24 08:47:37] 2025-07-24 12:47:37,078 [wrapper] Test setup, not cleaning
[2025-07-24 08:47:37] 2025-07-24 12:47:37,105 [wrapper] apfmon messages muted
[2025-07-24 08:47:37] 2025-07-24 12:47:37,116 [wrapper] ==== wrapper stdout END ====
[2025-07-24 08:47:37] 2025-07-24 12:47:37,125 [wrapper] ==== wrapper stderr END ====
[2025-07-24 08:47:37]  *** Error codes and diagnostics ***
[2025-07-24 08:47:37]     "exeErrorCode": 0,
[2025-07-24 08:47:37]     "exeErrorDiag": "",
[2025-07-24 08:47:37]     "pilotErrorCode": 0,
[2025-07-24 08:47:37]     "pilotErrorDiag": "",
[2025-07-24 08:47:37]  *** Listing of results directory ***
[2025-07-24 08:47:37] total 530420
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 12:27 pilot3.tar.gz
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 12:32 queuedata.json
[2025-07-24 08:47:37] -rwx------. 1 boincer umatlas     36292 Jul 23 12:33 runpilot2-wrapper.sh
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas       100 Jul 23 21:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 08:47:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 21:41 run_atlas
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas       105 Jul 23 21:41 job.xml
[2025-07-24 08:47:37] -rw-r--r--. 2 boincer umatlas 305095210 Jul 23 21:41 EVNT.45668886._000035.pool.root.1
[2025-07-24 08:47:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 21:41 start_atlas.sh
[2025-07-24 08:47:37] drwxrwx--x. 2 boincer umatlas        68 Jul 23 21:41 shared
[2025-07-24 08:47:37] -rw-r--r--. 2 boincer umatlas    542882 Jul 23 21:41 input.tar.gz
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas         0 Jul 23 21:41 boinc_lockfile
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas      2538 Jul 23 21:41 pandaJob.out
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas    979640 Jul 23 21:42 agis_schedconf.cvmfs.json
[2025-07-24 08:47:37] drwx------. 4 boincer umatlas      4096 Jul 23 21:42 pilot3
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas      6549 Jul 24 08:38 init_data.xml
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas 226537399 Jul 24 08:45 HITS.45668889._000903.pool.root.1
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas       532 Jul 24 08:46 boinc_task_state.xml
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas      1037 Jul 24 08:46 memory_monitor_summary.json
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas   1593041 Jul 24 08:46 agis_ddmendpoints.agis.ALL.json
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas    631705 Jul 24 08:46 log.45668889._000903.job.log.tgz.1
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas        95 Jul 24 08:46 pilot_heartbeat.json
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas      7822 Jul 24 08:47 heartbeat.json
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas        29 Jul 24 08:47 wrapper_checkpoint.txt
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas       823 Jul 24 08:47 pilotlog.txt
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 08:47 boinc_mmap_file
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas   3191010 Jul 24 08:47 log.45668889._000903.job.log.1
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas       357 Jul 24 08:47 output.list
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas       620 Jul 24 08:47 runtime_log
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas   3840000 Jul 24 08:47 result.tar.gz
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas       659 Jul 24 08:47 zETMDmWary7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0uLLDmU2f0Po.diag
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas      8812 Jul 24 08:47 runtime_log.err
[2025-07-24 08:47:37] -rw-r--r--. 1 boincer umatlas     21364 Jul 24 08:47 stderr.txt
[2025-07-24 08:47:37] HITS file was successfully produced:
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas 226537399 Jul 24 08:45 shared/HITS.pool.root.1
[2025-07-24 08:47:37]  *** Contents of shared directory: ***
[2025-07-24 08:47:37] total 523480
[2025-07-24 08:47:37] -rw-r--r--. 2 boincer umatlas 305095210 Jul 23 21:41 ATLAS.root_0
[2025-07-24 08:47:37] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 21:41 start_atlas.sh
[2025-07-24 08:47:37] -rw-r--r--. 2 boincer umatlas    542882 Jul 23 21:41 input.tar.gz
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas 226537399 Jul 24 08:45 HITS.pool.root.1
[2025-07-24 08:47:37] -rw-------. 1 boincer umatlas   3840000 Jul 24 08:47 result.tar.gz
08:47:38 (3392984): run_atlas exited; CPU time 115863.728958
08:47:38 (3392984): called boinc_finish(0)

</stderr_txt>
]]>

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