Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:34:53 (4172366): wrapper (7.7.26015): starting
08:34:53 (4172366): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 08:34:53] Arguments: --nthreads 12
[2025-07-24 08:34:53] Threads: 12
[2025-07-24 08:34:53] Checking for CVMFS
[2025-07-24 08:34:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 08:34:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 08:34:54] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 08:34:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 08:34:54] 2.13.1.0 4205 28196 191932 148685 1 188 25301082 46080000 5646 130560 0 228898134 99.916 55951964 24086 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-24 08:34:54] CVMFS is ok
[2025-07-24 08:34:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 08:34:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 08:34:54] Further information can be found at the LHC@home message board.
[2025-07-24 08:34:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 08:34:54] Checking for apptainer binary...
[2025-07-24 08:34:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 08:34:54] Running /usr/bin/apptainer --version
[2025-07-24 08:34:54] apptainer version 1.4.1-1.el9
[2025-07-24 08:34:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 08:34:54] mff2104.farm.particle.cz
[2025-07-24 08:34:54] apptainer works
[2025-07-24 08:34:54] Set ATHENA_PROC_NUMBER=12
[2025-07-24 08:34:54] Set ATHENA_CORE_NUMBER=12
[2025-07-24 08:34:54] Starting ATLAS job with PandaID=6744111232
[2025-07-24 08:34:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 09:51:17]  *** The last 200 lines of the pilot log: ***
[2025-07-24 09:51:17]  is_altstaged=None
[2025-07-24 09:51:17]  is_tar=False
[2025-07-24 09:51:17]  lfn=log.45697453._006385.job.log.tgz.1
[2025-07-24 09:51:17]  mtime=0
[2025-07-24 09:51:17]  protocol_id=None
[2025-07-24 09:51:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 09:51:17]  replicas=None
[2025-07-24 09:51:17]  scope=mc23_13p6TeV
[2025-07-24 09:51:17]  status=None
[2025-07-24 09:51:17]  status_code=0
[2025-07-24 09:51:17]  storage_token=
[2025-07-24 09:51:17]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6744111232/log.45697453._006385.job.log.tgz.1
[2025-07-24 09:51:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/68/log.45697453._006385.job.log.tgz.1
[2025-07-24 09:51:17]  workdir=None
[2025-07-24 09:51:17] ]
[2025-07-24 09:51:17] 2025-07-24 07:50:39,285 | INFO     | transferring file log.45697453._006385.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6744111232/log.45697453._006385.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-24 09:51:17] 2025-07-24 07:50:39,285 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6744111232/log.45697453._006385.job.log.tgz.1 /scratch/.boinc/slots/1/log.45697453._006385.j
[2025-07-24 09:51:17] 2025-07-24 07:50:39,301 | INFO     | adding to output.list: log.45697453._006385.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/68/log.45697453._006385.job.log.tg
[2025-07-24 09:51:17] 2025-07-24 07:50:39,301 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 09:51:17] 2025-07-24 07:50:39,302 | INFO     | summary of transferred files:
[2025-07-24 09:51:17] 2025-07-24 07:50:39,302 | INFO     |  -- lfn=log.45697453._006385.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 09:51:17] 2025-07-24 07:50:39,302 | INFO     | stage-out finished correctly
[2025-07-24 09:51:17] 2025-07-24 07:50:39,913 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 09:51:17] 2025-07-24 07:50:40,059 | INFO     | monitor loop #330: job 0:6744111232 is in state 'finished'
[2025-07-24 09:51:17] 2025-07-24 07:50:40,059 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 09:51:17] 2025-07-24 07:50:40,240 | INFO     | job 6744111232 has state=finished
[2025-07-24 09:51:17] 2025-07-24 07:50:40,240 | INFO     | preparing for final server update for job 6744111232 in state='finished'
[2025-07-24 09:51:17] 2025-07-24 07:50:40,241 | INFO     | this job has now completed (state=finished)
[2025-07-24 09:51:17] 2025-07-24 07:50:40,241 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 09:51:17] 2025-07-24 07:50:40,241 | INFO     | log transfer has been attempted: DONE
[2025-07-24 09:51:17] 2025-07-24 07:50:40,241 | INFO     | job 6744111232 has finished - writing final server update
[2025-07-24 09:51:17] 2025-07-24 07:50:40,242 | INFO     | total number of processed events: 400 (read)
[2025-07-24 09:51:17] 2025-07-24 07:50:40,242 | INFO     | executing command: lscpu
[2025-07-24 09:51:17] 2025-07-24 07:50:40,299 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 09:51:17] 2025-07-24 07:50:42,563 | INFO     | monitor loop #331: job 0:6744111232 is in state 'finished'
[2025-07-24 09:51:17] 2025-07-24 07:50:42,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 09:51:17] 2025-07-24 07:50:44,302 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 09:51:17] 2025-07-24 07:50:44,316 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2756.533916666666
[2025-07-24 09:51:17] 2025-07-24 07:50:44,331 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6744111232/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 09:51:17] 2025-07-24 07:50:44,332 | INFO     | extracted standard info from prmon json
[2025-07-24 09:51:17] 2025-07-24 07:50:44,332 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 09:51:17] 2025-07-24 07:50:44,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 09:51:17] 2025-07-24 07:50:44,332 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 09:51:17] 2025-07-24 07:50:44,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 09:51:17] 2025-07-24 07:50:44,333 | INFO     | fitting pss+swap vs Time
[2025-07-24 09:51:17] 2025-07-24 07:50:44,333 | INFO     | sum of square deviations: 93240818.0
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | sum of deviations: -1148136814.9999998
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | mean x: 1753341251.0
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | mean y: 2787845.074626866
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | -- intersect: 21592856258.36606
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | intersect: 21592856258.36606
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | chi2: 0.008218025139324993
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | -- intersect: 21592856258.36606
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | current memory leak: -12.31 B/s (using 67 data points, chi2=0.01)
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | could have reported an average CPU frequency of 2729 MHz (6 samples)
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | ..............................
[2025-07-24 09:51:17] 2025-07-24 07:50:44,334 | INFO     | . Timing measurements:
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | . get job = 0 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | . initial setup = 1 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | . payload setup = 6 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | . stage-in = 0 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | . payload execution = 4507 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | . stage-out = 0 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | . log creation = 0 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,335 | INFO     | ..............................
[2025-07-24 09:51:17] 2025-07-24 07:50:44,395 | INFO     | 
[2025-07-24 09:51:17] 2025-07-24 07:50:44,395 | INFO     | job summary report
[2025-07-24 09:51:17] 2025-07-24 07:50:44,395 | INFO     | --------------------------------------------------
[2025-07-24 09:51:17] 2025-07-24 07:50:44,395 | INFO     | PanDA job id: 6744111232
[2025-07-24 09:51:17] 2025-07-24 07:50:44,395 | INFO     | task id: 45697453
[2025-07-24 09:51:17] 2025-07-24 07:50:44,395 | INFO     | errors: (none)
[2025-07-24 09:51:17] 2025-07-24 07:50:44,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | pilot state: finished 
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | transexitcode: 0
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | exeerrorcode: 0
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | exeerrordiag: 
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | exitcode: 0
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | exitmsg: OK
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | cpuconsumptiontime: 49603 s
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | nevents: 400
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | neventsw: 0
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | pid: 4183815
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | pgrp: 4183815
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | corecount: 12
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | event service: False
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | sizes: {0: 2397333, 1: 2397532, 6: 2397794, 11: 2397822, 4518: 2433087, 4519: 2433087, 4523: 2433409}
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | --------------------------------------------------
[2025-07-24 09:51:17] 2025-07-24 07:50:44,396 | INFO     | 
[2025-07-24 09:51:17] 2025-07-24 07:50:44,397 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2025-07-24 09:51:17] 2025-07-24 07:50:44,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 09:51:17] 2025-07-24 07:50:44,417 | INFO     | job 6744111232 has completed (purged errors)
[2025-07-24 09:51:17] 2025-07-24 07:50:44,418 | INFO     | overall cleanup function is called
[2025-07-24 09:51:17] 2025-07-24 07:50:45,427 | INFO     | --- collectZombieJob: --- 10, [4183815]
[2025-07-24 09:51:17] 2025-07-24 07:50:45,427 | INFO     | zombie collector waiting for pid 4183815
[2025-07-24 09:51:17] 2025-07-24 07:50:45,427 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 09:51:17] 2025-07-24 07:50:45,427 | INFO     | collected zombie processes
[2025-07-24 09:51:17] 2025-07-24 07:50:45,427 | INFO     | will attempt to kill all subprocesses of pid=4183815
[2025-07-24 09:51:17] 2025-07-24 07:50:45,646 | INFO     | process IDs to be killed: [4183815] (in reverse order)
[2025-07-24 09:51:17] 2025-07-24 07:50:45,736 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 09:51:17] 2025-07-24 07:50:45,737 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 09:51:17] 2025-07-24 07:50:45,746 | INFO     | did not find any defunct processes belonging to 4183815
[2025-07-24 09:51:17] 2025-07-24 07:50:45,753 | INFO     | did not find any defunct processes belonging to 4183815
[2025-07-24 09:51:17] 2025-07-24 07:50:45,753 | INFO     | ready for new job
[2025-07-24 09:51:17] 2025-07-24 07:50:45,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 09:51:17] 2025-07-24 07:50:45,754 | INFO     | ***************************************
[2025-07-24 09:51:17] 2025-07-24 07:50:45,754 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 09:51:17] 2025-07-24 07:50:45,754 | INFO     | ***************************************
[2025-07-24 09:51:17] 2025-07-24 07:50:45,754 | INFO     | 
[2025-07-24 09:51:17] 2025-07-24 07:50:45,759 | INFO     | architecture information:
[2025-07-24 09:51:17] 2025-07-24 07:50:45,759 | INFO     | executing command: cat /etc/os-release
[2025-07-24 09:51:17] 2025-07-24 07:50:45,774 | INFO     | cat /etc/os-release:
[2025-07-24 09:51:17] NAME="CentOS Linux"
[2025-07-24 09:51:17] VERSION="7 (Core)"
[2025-07-24 09:51:17] ID="centos"
[2025-07-24 09:51:17] ID_LIKE="rhel fedora"
[2025-07-24 09:51:17] VERSION_ID="7"
[2025-07-24 09:51:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 09:51:17] ANSI_COLOR="0;31"
[2025-07-24 09:51:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 09:51:17] HOME_URL="https://www.centos.org/"
[2025-07-24 09:51:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 09:51:17] 
[2025-07-24 09:51:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 09:51:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 09:51:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 09:51:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 09:51:17] 
[2025-07-24 09:51:17] 2025-07-24 07:50:45,774 | INFO     | ***************************************
[2025-07-24 09:51:17] 2025-07-24 07:50:46,277 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2025-07-24 09:51:17] 2025-07-24 07:50:46,295 | INFO     | sufficient remaining disk space (1679019737088 B)
[2025-07-24 09:51:17] 2025-07-24 07:50:46,296 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 09:51:17] 2025-07-24 07:50:46,296 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 09:51:17] 2025-07-24 07:50:46,296 | INFO     | update_server=False
[2025-07-24 09:51:17] 2025-07-24 07:50:46,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 09:51:17] 2025-07-24 07:50:46,297 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 09:51:17] 2025-07-24 07:50:46,297 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 09:51:17] 2025-07-24 07:50:46,297 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 09:51:17] 2025-07-24 07:50:46,298 | INFO     | aborting loop
[2025-07-24 09:51:17] 2025-07-24 07:50:47,096 | INFO     | all data control threads have been joined
[2025-07-24 09:51:17] 2025-07-24 07:50:47,104 | INFO     | all payload control threads have been joined
[2025-07-24 09:51:17] 2025-07-24 07:50:47,302 | INFO     | [job] job monitor thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:47,302 | INFO     | [job] retrieve thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:47,303 | INFO     | [job] queue monitor thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:47,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 09:51:17] 2025-07-24 07:50:47,572 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:47,591 | INFO     | all job control threads have been joined
[2025-07-24 09:51:17] 2025-07-24 07:50:47,622 | INFO     | [payload] failed_post thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:47,771 | INFO     | [payload] validate_post thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:48,097 | INFO     | [data] copytool_in thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:48,102 | INFO     | [data] control thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:48,110 | INFO     | [payload] control thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:48,542 | INFO     | [job] validate thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:48,597 | INFO     | [job] control thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:48,598 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:48,757 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:49,381 | INFO     | [data] copytool_out thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:50,303 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:56,766 | INFO     | job.realtimelogging is not enabled
[2025-07-24 09:51:17] 2025-07-24 07:50:57,772 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 09:51:17] 2025-07-24 07:50:58,427 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350531675968)>', '<ExcThread(monitor, started 140350043703040)>']
[2025-07-24 09:51:17] 2025-07-24 07:51:03,452 | INFO     | all workflow threads have been joined
[2025-07-24 09:51:17] 2025-07-24 07:51:03,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 09:51:17] 2025-07-24 07:51:03,452 | INFO     | traces error code: 0
[2025-07-24 09:51:17] 2025-07-24 07:51:03,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 09:51:17] 2025-07-24 07:51:17,004 | INFO     | PID=4176677 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 09:51:17] 2025-07-24 07:51:17,005 | INFO     | .. there are 8 such processes running
[2025-07-24 09:51:17] 2025-07-24 07:51:17,005 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 09:51:17] 2025-07-24 07:51:17,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 09:51:17] 2025-07-24 07:51:17,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 09:51:17] 2025-07-24 07:51:17,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 09:51:17] 2025-07-24 07:51:17,005 | INFO     | [monitor] control thread has ended
[2025-07-24 09:51:17] 2025-07-24 07:51:17,116 [wrapper] ==== pilot stdout END ====
[2025-07-24 09:51:17] 2025-07-24 07:51:17,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 09:51:17] 2025-07-24 07:51:17,122 [wrapper] pilotpid: 4176677
[2025-07-24 09:51:17] 2025-07-24 07:51:17,125 [wrapper] Pilot exit status: 0
[2025-07-24 09:51:17] 2025-07-24 07:51:17,135 [wrapper] pandaids: 6744111232
[2025-07-24 09:51:17] 2025-07-24 07:51:17,196 [wrapper] cleanup supervisor_pilot  145662 4176678
[2025-07-24 09:51:17] 2025-07-24 07:51:17,199 [wrapper] Test setup, not cleaning
[2025-07-24 09:51:17] 2025-07-24 07:51:17,202 [wrapper] apfmon messages muted
[2025-07-24 09:51:17] 2025-07-24 07:51:17,205 [wrapper] ==== wrapper stdout END ====
[2025-07-24 09:51:17] 2025-07-24 07:51:17,208 [wrapper] ==== wrapper stderr END ====
[2025-07-24 09:51:17]  *** Error codes and diagnostics ***
[2025-07-24 09:51:17]     "exeErrorCode": 0,
[2025-07-24 09:51:17]     "exeErrorDiag": "",
[2025-07-24 09:51:17]     "pilotErrorCode": 0,
[2025-07-24 09:51:17]     "pilotErrorDiag": "",
[2025-07-24 09:51:17]  *** Listing of results directory ***
[2025-07-24 09:51:17] total 572316
[2025-07-24 09:51:17] -rwx------ 1 boinc boinc     36292 Jul 24 02:49 runpilot2-wrapper.sh
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc      5112 Jul 24 02:49 queuedata.json
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc    530466 Jul 24 02:49 pilot3.tar.gz
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc       100 Jul 24 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 09:51:17] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 08:34 run_atlas
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc       105 Jul 24 08:34 job.xml
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc      6664 Jul 24 08:34 init_data.xml
[2025-07-24 09:51:17] -rw-r--r-- 2 boinc boinc 318606060 Jul 24 08:34 EVNT.45697451._000171.pool.root.1
[2025-07-24 09:51:17] -rw-r--r-- 2 boinc boinc     15095 Jul 24 08:34 start_atlas.sh
[2025-07-24 09:51:17] drwxrwx--x 2 boinc boinc      4096 Jul 24 08:34 shared
[2025-07-24 09:51:17] -rw-r--r-- 2 boinc boinc    542906 Jul 24 08:34 input.tar.gz
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc         0 Jul 24 08:34 boinc_lockfile
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc      2635 Jul 24 08:34 pandaJob.out
[2025-07-24 09:51:17] -rw------- 1 boinc boinc    979632 Jul 24 08:35 agis_schedconf.cvmfs.json
[2025-07-24 09:51:17] -rw------- 1 boinc boinc   1593041 Jul 24 08:35 agis_ddmendpoints.agis.ALL.json
[2025-07-24 09:51:17] drwx------ 4 boinc boinc      4096 Jul 24 08:35 pilot3
[2025-07-24 09:51:17] -rw------- 1 boinc boinc 261966336 Jul 24 09:50 HITS.45697453._006385.pool.root.1
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc       529 Jul 24 09:50 boinc_task_state.xml
[2025-07-24 09:51:17] -rw------- 1 boinc boinc        95 Jul 24 09:50 pilot_heartbeat.json
[2025-07-24 09:51:17] -rw------- 1 boinc boinc      1037 Jul 24 09:50 memory_monitor_summary.json
[2025-07-24 09:51:17] -rw------- 1 boinc boinc    355601 Jul 24 09:50 log.45697453._006385.job.log.tgz.1
[2025-07-24 09:51:17] -rw------- 1 boinc boinc      7776 Jul 24 09:50 heartbeat.json
[2025-07-24 09:51:17] -rw------- 1 boinc boinc       822 Jul 24 09:51 pilotlog.txt
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc      8192 Jul 24 09:51 boinc_mmap_file
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc        27 Jul 24 09:51 wrapper_checkpoint.txt
[2025-07-24 09:51:17] -rw------- 1 boinc boinc    447099 Jul 24 09:51 log.45697453._006385.job.log.1
[2025-07-24 09:51:17] -rw------- 1 boinc boinc       357 Jul 24 09:51 output.list
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc       620 Jul 24 09:51 runtime_log
[2025-07-24 09:51:17] -rw------- 1 boinc boinc    819200 Jul 24 09:51 result.tar.gz
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc      8721 Jul 24 09:51 runtime_log.err
[2025-07-24 09:51:17] -rw------- 1 boinc boinc       663 Jul 24 09:51 4Z2MDmaKzy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm73LLDmpnlobm.diag
[2025-07-24 09:51:17] -rw-r--r-- 1 boinc boinc     21495 Jul 24 09:51 stderr.txt
[2025-07-24 09:51:17] HITS file was successfully produced:
[2025-07-24 09:51:17] -rw------- 1 boinc boinc 261966336 Jul 24 09:50 shared/HITS.pool.root.1
[2025-07-24 09:51:17]  *** Contents of shared directory: ***
[2025-07-24 09:51:17] total 568324
[2025-07-24 09:51:17] -rw-r--r-- 2 boinc boinc 318606060 Jul 24 08:34 ATLAS.root_0
[2025-07-24 09:51:17] -rw-r--r-- 2 boinc boinc     15095 Jul 24 08:34 start_atlas.sh
[2025-07-24 09:51:17] -rw-r--r-- 2 boinc boinc    542906 Jul 24 08:34 input.tar.gz
[2025-07-24 09:51:17] -rw------- 1 boinc boinc 261966336 Jul 24 09:50 HITS.pool.root.1
[2025-07-24 09:51:17] -rw------- 1 boinc boinc    819200 Jul 24 09:51 result.tar.gz
09:51:19 (4172366): run_atlas exited; CPU time 49698.346146
09:51:19 (4172366): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN