Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:34:11 (4152201): wrapper (7.7.26015): starting
08:34:11 (4152201): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 08:34:11] Arguments: --nthreads 12
[2025-07-24 08:34:11] Threads: 12
[2025-07-24 08:34:11] Checking for CVMFS
[2025-07-24 08:34:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 08:34:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 08:34:11] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 08:34:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 08:34:12] 2.13.1.0 4205 28196 191932 148685 2 188 25301082 46080000 5634 130560 0 228850652 99.916 55951964 24086 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-24 08:34:12] CVMFS is ok
[2025-07-24 08:34:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 08:34:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 08:34:12] Further information can be found at the LHC@home message board.
[2025-07-24 08:34:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 08:34:12] Checking for apptainer binary...
[2025-07-24 08:34:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 08:34:12] Running /usr/bin/apptainer --version
[2025-07-24 08:34:12] apptainer version 1.4.1-1.el9
[2025-07-24 08:34:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 08:34:12] mff2104.farm.particle.cz
[2025-07-24 08:34:12] apptainer works
[2025-07-24 08:34:12] Set ATHENA_PROC_NUMBER=12
[2025-07-24 08:34:12] Set ATHENA_CORE_NUMBER=12
[2025-07-24 08:34:12] Starting ATLAS job with PandaID=6744110242
[2025-07-24 08:34:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 09:53:36]  *** The last 200 lines of the pilot log: ***
[2025-07-24 09:53:36]  lfn=log.45697472._006375.job.log.tgz.1
[2025-07-24 09:53:36]  mtime=0
[2025-07-24 09:53:36]  protocol_id=None
[2025-07-24 09:53:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 09:53:36]  replicas=None
[2025-07-24 09:53:36]  scope=mc23_13p6TeV
[2025-07-24 09:53:36]  status=None
[2025-07-24 09:53:36]  status_code=0
[2025-07-24 09:53:36]  storage_token=
[2025-07-24 09:53:36]  surl=/scratch/.boinc/slots/3/PanDA_Pilot-6744110242/log.45697472._006375.job.log.tgz.1
[2025-07-24 09:53:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/ec/log.45697472._006375.job.log.tgz.1
[2025-07-24 09:53:36]  workdir=None
[2025-07-24 09:53:36] ]
[2025-07-24 09:53:36] 2025-07-24 07:52:55,295 | INFO     | transferring file log.45697472._006375.job.log.tgz.1 from /scratch/.boinc/slots/3/PanDA_Pilot-6744110242/log.45697472._006375.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-24 09:53:36] 2025-07-24 07:52:55,295 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/3/PanDA_Pilot-6744110242/log.45697472._006375.job.log.tgz.1 /scratch/.boinc/slots/3/log.45697472._006375.j
[2025-07-24 09:53:36] 2025-07-24 07:52:55,314 | INFO     | adding to output.list: log.45697472._006375.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/ec/log.45697472._006375.job.log.tg
[2025-07-24 09:53:36] 2025-07-24 07:52:55,314 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 09:53:36] 2025-07-24 07:52:55,314 | INFO     | summary of transferred files:
[2025-07-24 09:53:36] 2025-07-24 07:52:55,315 | INFO     |  -- lfn=log.45697472._006375.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 09:53:36] 2025-07-24 07:52:55,315 | INFO     | stage-out finished correctly
[2025-07-24 09:53:36] 2025-07-24 07:52:56,044 | INFO     | monitor loop #344: job 0:6744110242 is in state 'finished'
[2025-07-24 09:53:36] 2025-07-24 07:52:56,044 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 09:53:36] 2025-07-24 07:52:58,164 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 09:53:36] 2025-07-24 07:52:58,547 | INFO     | monitor loop #345: job 0:6744110242 is in state 'finished'
[2025-07-24 09:53:36] 2025-07-24 07:52:58,547 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 09:53:36] 2025-07-24 07:52:58,707 | INFO     | job 6744110242 has state=finished
[2025-07-24 09:53:36] 2025-07-24 07:52:58,708 | INFO     | preparing for final server update for job 6744110242 in state='finished'
[2025-07-24 09:53:36] 2025-07-24 07:52:58,708 | INFO     | this job has now completed (state=finished)
[2025-07-24 09:53:36] 2025-07-24 07:52:58,708 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 09:53:36] 2025-07-24 07:52:58,708 | INFO     | log transfer has been attempted: DONE
[2025-07-24 09:53:36] 2025-07-24 07:52:58,708 | INFO     | job 6744110242 has finished - writing final server update
[2025-07-24 09:53:36] 2025-07-24 07:52:58,709 | INFO     | total number of processed events: 400 (read)
[2025-07-24 09:53:36] 2025-07-24 07:52:58,710 | INFO     | executing command: lscpu
[2025-07-24 09:53:36] 2025-07-24 07:52:58,766 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 09:53:36] 2025-07-24 07:53:01,050 | INFO     | monitor loop #346: job 0:6744110242 is in state 'finished'
[2025-07-24 09:53:36] 2025-07-24 07:53:01,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 09:53:36] 2025-07-24 07:53:02,498 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 09:53:36] 2025-07-24 07:53:02,508 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2717.6024062500005
[2025-07-24 09:53:36] 2025-07-24 07:53:02,520 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-6744110242/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 09:53:36] 2025-07-24 07:53:02,520 | INFO     | extracted standard info from prmon json
[2025-07-24 09:53:36] 2025-07-24 07:53:02,520 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 09:53:36] 2025-07-24 07:53:02,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 09:53:36] 2025-07-24 07:53:02,521 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 09:53:36] 2025-07-24 07:53:02,521 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 09:53:36] 2025-07-24 07:53:02,522 | INFO     | fitting pss+swap vs Time
[2025-07-24 09:53:36] 2025-07-24 07:53:02,522 | INFO     | sum of square deviations: 106336877.5
[2025-07-24 09:53:36] 2025-07-24 07:53:02,522 | INFO     | sum of deviations: -1301516221.5
[2025-07-24 09:53:36] 2025-07-24 07:53:02,522 | INFO     | mean x: 1753341301.5
[2025-07-24 09:53:36] 2025-07-24 07:53:02,522 | INFO     | mean y: 2801509.557142857
[2025-07-24 09:53:36] 2025-07-24 07:53:02,522 | INFO     | -- intersect: 21462921454.570316
[2025-07-24 09:53:36] 2025-07-24 07:53:02,522 | INFO     | intersect: 21462921454.570316
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | chi2: 0.011849773309201993
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | -- intersect: 21462921454.570316
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | current memory leak: -12.24 B/s (using 70 data points, chi2=0.01)
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | could have reported an average CPU frequency of 2735 MHz (6 samples)
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | ..............................
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . Timing measurements:
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . get job = 0 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . initial setup = 1 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . payload setup = 6 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . stage-in = 0 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . payload execution = 4684 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . stage-out = 0 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | . log creation = 0 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,523 | INFO     | ..............................
[2025-07-24 09:53:36] 2025-07-24 07:53:02,590 | INFO     | 
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | job summary report
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | --------------------------------------------------
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | PanDA job id: 6744110242
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | task id: 45697472
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | errors: (none)
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | pilot state: finished 
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | transexitcode: 0
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | exeerrorcode: 0
[2025-07-24 09:53:36] 2025-07-24 07:53:02,591 | INFO     | exeerrordiag: 
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | exitcode: 0
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | exitmsg: OK
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | cpuconsumptiontime: 51455 s
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | nevents: 400
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | neventsw: 0
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | pid: 4165302
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | pgrp: 4165302
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | corecount: 12
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | event service: False
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | sizes: {0: 2397253, 1: 2397508, 6: 2397770, 12: 2397798, 4694: 2423974, 4695: 2432974, 4698: 2433158, 4703: 2433352}
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | --------------------------------------------------
[2025-07-24 09:53:36] 2025-07-24 07:53:02,592 | INFO     | 
[2025-07-24 09:53:36] 2025-07-24 07:53:02,593 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2025-07-24 09:53:36] 2025-07-24 07:53:02,617 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 09:53:36] 2025-07-24 07:53:02,618 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 09:53:36] 2025-07-24 07:53:02,619 | INFO     | job 6744110242 has completed (purged errors)
[2025-07-24 09:53:36] 2025-07-24 07:53:02,619 | INFO     | overall cleanup function is called
[2025-07-24 09:53:36] 2025-07-24 07:53:03,627 | INFO     | --- collectZombieJob: --- 10, [4165302]
[2025-07-24 09:53:36] 2025-07-24 07:53:03,628 | INFO     | zombie collector waiting for pid 4165302
[2025-07-24 09:53:36] 2025-07-24 07:53:03,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 09:53:36] 2025-07-24 07:53:03,628 | INFO     | collected zombie processes
[2025-07-24 09:53:36] 2025-07-24 07:53:03,628 | INFO     | will attempt to kill all subprocesses of pid=4165302
[2025-07-24 09:53:36] 2025-07-24 07:53:03,957 | INFO     | process IDs to be killed: [4165302] (in reverse order)
[2025-07-24 09:53:36] 2025-07-24 07:53:04,074 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 09:53:36] 2025-07-24 07:53:04,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 09:53:36] 2025-07-24 07:53:04,086 | INFO     | did not find any defunct processes belonging to 4165302
[2025-07-24 09:53:36] 2025-07-24 07:53:04,096 | INFO     | did not find any defunct processes belonging to 4165302
[2025-07-24 09:53:36] 2025-07-24 07:53:04,096 | INFO     | ready for new job
[2025-07-24 09:53:36] 2025-07-24 07:53:04,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 09:53:36] 2025-07-24 07:53:04,099 | INFO     | ***************************************
[2025-07-24 09:53:36] 2025-07-24 07:53:04,099 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 09:53:36] 2025-07-24 07:53:04,099 | INFO     | ***************************************
[2025-07-24 09:53:36] 2025-07-24 07:53:04,099 | INFO     | 
[2025-07-24 09:53:36] 2025-07-24 07:53:04,105 | INFO     | architecture information:
[2025-07-24 09:53:36] 2025-07-24 07:53:04,105 | INFO     | executing command: cat /etc/os-release
[2025-07-24 09:53:36] 2025-07-24 07:53:04,127 | INFO     | cat /etc/os-release:
[2025-07-24 09:53:36] NAME="CentOS Linux"
[2025-07-24 09:53:36] VERSION="7 (Core)"
[2025-07-24 09:53:36] ID="centos"
[2025-07-24 09:53:36] ID_LIKE="rhel fedora"
[2025-07-24 09:53:36] VERSION_ID="7"
[2025-07-24 09:53:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 09:53:36] ANSI_COLOR="0;31"
[2025-07-24 09:53:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 09:53:36] HOME_URL="https://www.centos.org/"
[2025-07-24 09:53:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 09:53:36] 
[2025-07-24 09:53:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 09:53:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 09:53:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 09:53:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 09:53:36] 
[2025-07-24 09:53:36] 2025-07-24 07:53:04,127 | INFO     | ***************************************
[2025-07-24 09:53:36] 2025-07-24 07:53:04,631 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2025-07-24 09:53:36] 2025-07-24 07:53:04,656 | INFO     | sufficient remaining disk space (1678027784192 B)
[2025-07-24 09:53:36] 2025-07-24 07:53:04,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 09:53:36] 2025-07-24 07:53:04,657 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 09:53:36] 2025-07-24 07:53:04,657 | INFO     | update_server=False
[2025-07-24 09:53:36] 2025-07-24 07:53:04,657 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 09:53:36] 2025-07-24 07:53:04,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 09:53:36] 2025-07-24 07:53:04,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 09:53:36] 2025-07-24 07:53:04,658 | INFO     | aborting loop
[2025-07-24 09:53:36] 2025-07-24 07:53:04,788 | INFO     | all payload control threads have been joined
[2025-07-24 09:53:36] 2025-07-24 07:53:04,798 | INFO     | all data control threads have been joined
[2025-07-24 09:53:36] 2025-07-24 07:53:05,401 | INFO     | all job control threads have been joined
[2025-07-24 09:53:36] 2025-07-24 07:53:05,662 | INFO     | [job] retrieve thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:05,663 | INFO     | [job] job monitor thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:05,789 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:05,793 | INFO     | [payload] control thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:05,803 | INFO     | [data] control thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:05,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 09:53:36] 2025-07-24 07:53:05,974 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:06,243 | INFO     | [payload] validate_post thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:06,407 | INFO     | [job] control thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:06,675 | INFO     | [data] copytool_in thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:06,971 | INFO     | [payload] failed_post thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:06,972 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:07,135 | INFO     | [job] validate thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:07,601 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 09:53:36] 2025-07-24 07:53:07,892 | INFO     | [data] copytool_out thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:08,607 | INFO     | [job] queue monitor thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:08,664 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:15,672 | INFO     | job.realtimelogging is not enabled
[2025-07-24 09:53:36] 2025-07-24 07:53:16,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 09:53:36] 2025-07-24 07:53:17,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445917173568)>', '<ExcThread(monitor, started 140445136963328)>']
[2025-07-24 09:53:36] 2025-07-24 07:53:22,546 | INFO     | all workflow threads have been joined
[2025-07-24 09:53:36] 2025-07-24 07:53:22,546 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 09:53:36] 2025-07-24 07:53:22,546 | INFO     | traces error code: 0
[2025-07-24 09:53:36] 2025-07-24 07:53:22,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 09:53:36] 2025-07-24 07:53:35,657 | INFO     | PID=4158183 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 09:53:36] 2025-07-24 07:53:35,658 | INFO     | .. there are 8 such processes running
[2025-07-24 09:53:36] 2025-07-24 07:53:35,658 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 09:53:36] 2025-07-24 07:53:35,658 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 09:53:36] 2025-07-24 07:53:35,658 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 09:53:36] 2025-07-24 07:53:35,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 09:53:36] 2025-07-24 07:53:35,658 | INFO     | [monitor] control thread has ended
[2025-07-24 09:53:36] 2025-07-24 07:53:35,804 [wrapper] ==== pilot stdout END ====
[2025-07-24 09:53:36] 2025-07-24 07:53:35,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 09:53:36] 2025-07-24 07:53:35,812 [wrapper] pilotpid: 4158183
[2025-07-24 09:53:36] 2025-07-24 07:53:35,815 [wrapper] Pilot exit status: 0
[2025-07-24 09:53:36] 2025-07-24 07:53:35,829 [wrapper] pandaids: 6744110242
[2025-07-24 09:53:36] 2025-07-24 07:53:35,909 [wrapper] cleanup supervisor_pilot  143124 4158184
[2025-07-24 09:53:36] 2025-07-24 07:53:35,912 [wrapper] Test setup, not cleaning
[2025-07-24 09:53:36] 2025-07-24 07:53:35,915 [wrapper] apfmon messages muted
[2025-07-24 09:53:36] 2025-07-24 07:53:35,917 [wrapper] ==== wrapper stdout END ====
[2025-07-24 09:53:36] 2025-07-24 07:53:35,920 [wrapper] ==== wrapper stderr END ====
[2025-07-24 09:53:36]  *** Error codes and diagnostics ***
[2025-07-24 09:53:36]     "exeErrorCode": 0,
[2025-07-24 09:53:36]     "exeErrorDiag": "",
[2025-07-24 09:53:36]     "pilotErrorCode": 0,
[2025-07-24 09:53:36]     "pilotErrorDiag": "",
[2025-07-24 09:53:36]  *** Listing of results directory ***
[2025-07-24 09:53:36] total 601968
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc    530466 Jul 24 02:21 pilot3.tar.gz
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc      5112 Jul 24 02:46 queuedata.json
[2025-07-24 09:53:36] -rwx------ 1 boinc boinc     36292 Jul 24 02:47 runpilot2-wrapper.sh
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc       100 Jul 24 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 09:53:36] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 08:34 run_atlas
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc       105 Jul 24 08:34 job.xml
[2025-07-24 09:53:36] -rw-r--r-- 2 boinc boinc 328856844 Jul 24 08:34 EVNT.45697470._000231.pool.root.1
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc      6664 Jul 24 08:34 init_data.xml
[2025-07-24 09:53:36] -rw-r--r-- 2 boinc boinc     15095 Jul 24 08:34 start_atlas.sh
[2025-07-24 09:53:36] drwxrwx--x 2 boinc boinc      4096 Jul 24 08:34 shared
[2025-07-24 09:53:36] -rw-r--r-- 2 boinc boinc    542910 Jul 24 08:34 input.tar.gz
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc         0 Jul 24 08:34 boinc_lockfile
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc      2610 Jul 24 08:34 pandaJob.out
[2025-07-24 09:53:36] -rw------- 1 boinc boinc    979632 Jul 24 08:34 agis_schedconf.cvmfs.json
[2025-07-24 09:53:36] -rw------- 1 boinc boinc   1593041 Jul 24 08:34 agis_ddmendpoints.agis.ALL.json
[2025-07-24 09:53:36] drwx------ 4 boinc boinc      4096 Jul 24 08:34 pilot3
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc       530 Jul 24 09:52 boinc_task_state.xml
[2025-07-24 09:53:36] -rw------- 1 boinc boinc 282056317 Jul 24 09:52 HITS.45697472._006375.pool.root.1
[2025-07-24 09:53:36] -rw------- 1 boinc boinc        95 Jul 24 09:52 pilot_heartbeat.json
[2025-07-24 09:53:36] -rw------- 1 boinc boinc      1025 Jul 24 09:52 memory_monitor_summary.json
[2025-07-24 09:53:36] -rw------- 1 boinc boinc    347692 Jul 24 09:52 log.45697472._006375.job.log.tgz.1
[2025-07-24 09:53:36] -rw------- 1 boinc boinc      7773 Jul 24 09:53 heartbeat.json
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc        27 Jul 24 09:53 wrapper_checkpoint.txt
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc      8192 Jul 24 09:53 boinc_mmap_file
[2025-07-24 09:53:36] -rw------- 1 boinc boinc       822 Jul 24 09:53 pilotlog.txt
[2025-07-24 09:53:36] -rw------- 1 boinc boinc    463605 Jul 24 09:53 log.45697472._006375.job.log.1
[2025-07-24 09:53:36] -rw------- 1 boinc boinc       357 Jul 24 09:53 output.list
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc       620 Jul 24 09:53 runtime_log
[2025-07-24 09:53:36] -rw------- 1 boinc boinc    829440 Jul 24 09:53 result.tar.gz
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc      8721 Jul 24 09:53 runtime_log.err
[2025-07-24 09:53:36] -rw------- 1 boinc boinc       663 Jul 24 09:53 2cxMDmTIzy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm63LLDmizawIo.diag
[2025-07-24 09:53:36] -rw-r--r-- 1 boinc boinc     21689 Jul 24 09:53 stderr.txt
[2025-07-24 09:53:36] HITS file was successfully produced:
[2025-07-24 09:53:36] -rw------- 1 boinc boinc 282056317 Jul 24 09:52 shared/HITS.pool.root.1
[2025-07-24 09:53:36]  *** Contents of shared directory: ***
[2025-07-24 09:53:36] total 597968
[2025-07-24 09:53:36] -rw-r--r-- 2 boinc boinc 328856844 Jul 24 08:34 ATLAS.root_0
[2025-07-24 09:53:36] -rw-r--r-- 2 boinc boinc     15095 Jul 24 08:34 start_atlas.sh
[2025-07-24 09:53:36] -rw-r--r-- 2 boinc boinc    542910 Jul 24 08:34 input.tar.gz
[2025-07-24 09:53:36] -rw------- 1 boinc boinc 282056317 Jul 24 09:52 HITS.pool.root.1
[2025-07-24 09:53:36] -rw------- 1 boinc boinc    829440 Jul 24 09:53 result.tar.gz
09:53:37 (4152201): run_atlas exited; CPU time 51549.700640
09:53:37 (4152201): called boinc_finish(0)

</stderr_txt>
]]>

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