Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:26:41 (1693): wrapper (7.7.26015): starting
18:26:41 (1693): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 18:26:41] Arguments: --nthreads 8
[2025-07-24 18:26:41] Threads: 8
[2025-07-24 18:26:41] Checking for CVMFS
[2025-07-24 18:26:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 18:26:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 18:26:43] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 18:26:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 18:26:44] 2.11.2.0 2013 105446 137176 148708 2 109 23206714 25165825 4353 130560 0 64784016 99.886 45679101 3536 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-24 18:26:44] CVMFS is ok
[2025-07-24 18:26:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 18:26:44] Checking for apptainer binary...
[2025-07-24 18:26:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 18:26:44] Running /usr/bin/apptainer --version
[2025-07-24 18:26:44] apptainer version 1.3.2-1.el7
[2025-07-24 18:26:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 18:26:55] cg-vwn303.simple-grid.lan
[2025-07-24 18:26:55] apptainer works
[2025-07-24 18:26:55] Set ATHENA_PROC_NUMBER=8
[2025-07-24 18:26:55] Set ATHENA_CORE_NUMBER=8
[2025-07-24 18:26:55] Starting ATLAS job with PandaID=6741710337
[2025-07-24 18:26:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 08:16:45]  *** The last 200 lines of the pilot log: ***
[2025-07-25 08:16:45] 2025-07-24 21:43:13,161 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 08:16:45] 2025-07-24 21:43:13,162 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 08:16:45] 2025-07-24 21:43:13,168 | INFO     | fitting pss+swap vs Time
[2025-07-25 08:16:45] 2025-07-24 21:43:13,169 | INFO     | sum of square deviations: 9148487810.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,173 | INFO     | sum of deviations: -34446841153.99999
[2025-07-25 08:16:45] 2025-07-24 21:43:13,173 | INFO     | mean x: 1753383880.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,173 | INFO     | mean y: 2552256.0161812296
[2025-07-25 08:16:45] 2025-07-24 21:43:13,173 | INFO     | -- intersect: 6604576246.289627
[2025-07-25 08:16:45] 2025-07-24 21:43:13,173 | INFO     | intersect: 6604576246.289627
[2025-07-25 08:16:45] 2025-07-24 21:43:13,174 | INFO     | chi2: 2.737741432931171
[2025-07-25 08:16:45] 2025-07-24 21:43:13,174 | INFO     | sum of square deviations: 8711530780.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,177 | INFO     | sum of deviations: -13194373352.5
[2025-07-25 08:16:45] 2025-07-24 21:43:13,178 | INFO     | mean x: 1753383727.5
[2025-07-25 08:16:45] 2025-07-24 21:43:13,178 | INFO     | mean y: 2559578.3125
[2025-07-25 08:16:45] 2025-07-24 21:43:13,178 | INFO     | -- intersect: 2658212197.246726
[2025-07-25 08:16:45] 2025-07-24 21:43:13,178 | INFO     | intersect: 2658212197.246726
[2025-07-25 08:16:45] 2025-07-24 21:43:13,178 | INFO     | chi2: 1.9712248294130121
[2025-07-25 08:16:45] 2025-07-24 21:43:13,179 | INFO     | current chi2=1.9712248294130121 (change=27.998137234511795 %)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,179 | INFO     | sum of square deviations: 8288713550.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,182 | INFO     | sum of deviations: -12911531389.000006
[2025-07-25 08:16:45] 2025-07-24 21:43:13,182 | INFO     | mean x: 1753383575.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,182 | INFO     | mean y: 2559680.347826087
[2025-07-25 08:16:45] 2025-07-24 21:43:13,183 | INFO     | -- intersect: 2733848067.7441483
[2025-07-25 08:16:45] 2025-07-24 21:43:13,183 | INFO     | intersect: 2733848067.7441483
[2025-07-25 08:16:45] 2025-07-24 21:43:13,183 | INFO     | chi2: 1.9707955464917541
[2025-07-25 08:16:45] 2025-07-24 21:43:13,183 | INFO     | current chi2=1.9707955464917541 (change=0.021777471288539966 %)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,183 | INFO     | right removable region: 298
[2025-07-25 08:16:45] 2025-07-24 21:43:13,184 | INFO     | sum of square deviations: 8711530780.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,187 | INFO     | sum of deviations: -92411151388.00002
[2025-07-25 08:16:45] 2025-07-24 21:43:13,187 | INFO     | mean x: 1753384032.5
[2025-07-25 08:16:45] 2025-07-24 21:43:13,187 | INFO     | mean y: 2572373.0986842103
[2025-07-25 08:16:45] 2025-07-24 21:43:13,187 | INFO     | -- intersect: 18602315789.107075
[2025-07-25 08:16:45] 2025-07-24 21:43:13,187 | INFO     | intersect: 18602315789.107075
[2025-07-25 08:16:45] 2025-07-24 21:43:13,188 | INFO     | chi2: 1.0325424606423486
[2025-07-25 08:16:45] 2025-07-24 21:43:13,188 | INFO     | current chi2=1.0325424606423486 (change=62.284880221984515 %)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,188 | INFO     | sum of square deviations: 8288713550.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,191 | INFO     | sum of deviations: -91015951580.00002
[2025-07-25 08:16:45] 2025-07-24 21:43:13,191 | INFO     | mean x: 1753384185.0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,191 | INFO     | mean y: 2571849.2441471573
[2025-07-25 08:16:45] 2025-07-24 21:43:13,192 | INFO     | -- intersect: 19255973371.73949
[2025-07-25 08:16:45] 2025-07-24 21:43:13,192 | INFO     | intersect: 19255973371.73949
[2025-07-25 08:16:45] 2025-07-24 21:43:13,192 | INFO     | chi2: 1.0147540337808718
[2025-07-25 08:16:45] 2025-07-24 21:43:13,192 | INFO     | current chi2=1.0147540337808718 (change=1.722779211463178 %)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,192 | INFO     | left removable region: 20
[2025-07-25 08:16:45] 2025-07-24 21:43:13,193 | INFO     | sum of square deviations: 6662039329.5
[2025-07-25 08:16:45] 2025-07-24 21:43:13,195 | INFO     | sum of deviations: -51993105481.49999
[2025-07-25 08:16:45] 2025-07-24 21:43:13,196 | INFO     | mean x: 1753384154.5
[2025-07-25 08:16:45] 2025-07-24 21:43:13,196 | INFO     | mean y: 2573684.492805755
[2025-07-25 08:16:45] 2025-07-24 21:43:13,196 | INFO     | -- intersect: 13686654907.31429
[2025-07-25 08:16:45] 2025-07-24 21:43:13,196 | INFO     | intersect: 13686654907.31429
[2025-07-25 08:16:45] 2025-07-24 21:43:13,197 | INFO     | chi2: 0.2087108284480991
[2025-07-25 08:16:45] 2025-07-24 21:43:13,197 | INFO     | -- intersect: 13686654907.31429
[2025-07-25 08:16:45] 2025-07-24 21:43:13,197 | INFO     | current memory leak: -7.80 B/s (using 278 data points, chi2=0.21)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,198 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,198 | INFO     | ..............................
[2025-07-25 08:16:45] 2025-07-24 21:43:13,198 | INFO     | . Timing measurements:
[2025-07-25 08:16:45] 2025-07-24 21:43:13,198 | INFO     | . get job = 0 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,198 | INFO     | . initial setup = 2 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,198 | INFO     | . payload setup = 12 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,199 | INFO     | . stage-in = 0 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,199 | INFO     | . payload execution = 18817 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,199 | INFO     | . stage-out = 3 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,199 | INFO     | . log creation = 0 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,199 | INFO     | ..............................
[2025-07-25 08:16:45] 2025-07-24 21:43:13,323 | INFO     | 
[2025-07-25 08:16:45] 2025-07-24 21:43:13,323 | INFO     | job summary report
[2025-07-25 08:16:45] 2025-07-24 21:43:13,323 | INFO     | --------------------------------------------------
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | PanDA job id: 6741710337
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | task id: 45697453
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | errors: (none)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | pilot state: finished 
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | transexitcode: 0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | exeerrorcode: 0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | exeerrordiag: 
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | exitcode: 0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | exitmsg: OK
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | cpuconsumptiontime: 73583 s
[2025-07-25 08:16:45] 2025-07-24 21:43:13,324 | INFO     | nevents: 400
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | neventsw: 0
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | pid: 12274
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | pgrp: 12274
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | corecount: 8
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | event service: False
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | sizes: {0: 2396733, 1: 2397589, 2: 2397589, 10: 2397879, 12: 2397907, 18833: 2430059, 18834: 2430186, 18837: 2439240, 18840: 2439296, 18938: 2439490}
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | --------------------------------------------------
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | 
[2025-07-25 08:16:45] 2025-07-24 21:43:13,325 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-07-25 08:16:45] 2025-07-24 21:43:13,351 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,351 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,352 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,353 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 08:16:45] 2025-07-24 21:43:13,353 | INFO     | job 6741710337 has completed (purged errors)
[2025-07-25 08:16:45] 2025-07-24 21:43:13,353 | INFO     | overall cleanup function is called
[2025-07-25 08:16:45] 2025-07-24 21:43:14,364 | INFO     | --- collectZombieJob: --- 10, [12274]
[2025-07-25 08:16:45] 2025-07-24 21:43:14,364 | INFO     | zombie collector waiting for pid 12274
[2025-07-25 08:16:45] 2025-07-24 21:43:14,364 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 08:16:45] 2025-07-24 21:43:14,364 | INFO     | collected zombie processes
[2025-07-25 08:16:45] 2025-07-24 21:43:14,365 | INFO     | will attempt to kill all subprocesses of pid=12274
[2025-07-25 08:16:45] 2025-07-24 21:43:14,476 | INFO     | process IDs to be killed: [12274] (in reverse order)
[2025-07-25 08:16:45] 2025-07-24 21:43:15,000 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 08:16:45] 2025-07-24 21:43:15,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 08:16:45] 2025-07-24 21:43:15,004 | INFO     | did not find any defunct processes belonging to 12274
[2025-07-25 08:16:45] 2025-07-24 21:43:15,007 | INFO     | did not find any defunct processes belonging to 12274
[2025-07-25 08:16:45] 2025-07-24 21:43:15,008 | INFO     | ready for new job
[2025-07-25 08:16:45] 2025-07-24 21:43:15,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 08:16:45] 2025-07-24 21:43:15,010 | INFO     | ***************************************
[2025-07-25 08:16:45] 2025-07-24 21:43:15,010 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 08:16:45] 2025-07-24 21:43:15,010 | INFO     | ***************************************
[2025-07-25 08:16:45] 2025-07-24 21:43:15,010 | INFO     | 
[2025-07-25 08:16:45] 2025-07-24 21:43:15,011 | INFO     | pilot is running in a VM
[2025-07-25 08:16:45] 2025-07-24 21:43:15,011 | INFO     | architecture information:
[2025-07-25 08:16:45] 2025-07-24 21:43:15,019 | INFO     | executing command: cat /etc/os-release
[2025-07-25 08:16:45] 2025-07-24 21:43:15,255 | INFO     | cat /etc/os-release:
[2025-07-25 08:16:45] NAME="CentOS Linux"
[2025-07-25 08:16:45] VERSION="7 (Core)"
[2025-07-25 08:16:45] ID="centos"
[2025-07-25 08:16:45] ID_LIKE="rhel fedora"
[2025-07-25 08:16:45] VERSION_ID="7"
[2025-07-25 08:16:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 08:16:45] ANSI_COLOR="0;31"
[2025-07-25 08:16:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 08:16:45] HOME_URL="https://www.centos.org/"
[2025-07-25 08:16:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 08:16:45] 
[2025-07-25 08:16:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 08:16:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 08:16:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 08:16:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 08:16:45] 
[2025-07-25 08:16:45] 2025-07-24 21:43:15,256 | INFO     | ***************************************
[2025-07-25 08:16:45] 2025-07-24 21:43:15,759 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-07-25 08:16:45] 2025-07-24 21:43:15,974 | INFO     | sufficient remaining disk space (496036216832 B)
[2025-07-25 08:16:45] 2025-07-24 21:43:15,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 08:16:45] 2025-07-24 21:43:15,975 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 08:16:45] 2025-07-24 21:43:15,975 | INFO     | update_server=False
[2025-07-25 08:16:45] 2025-07-24 21:43:15,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 08:16:45] 2025-07-24 21:43:15,975 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 08:16:45] 2025-07-24 21:43:15,975 | INFO     | aborting loop
[2025-07-25 08:16:45] 2025-07-24 21:43:15,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 08:16:45] 2025-07-24 21:43:15,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 08:16:45] 2025-07-24 21:43:16,474 | INFO     | all data control threads have been joined
[2025-07-25 08:16:45] 2025-07-24 21:43:16,981 | INFO     | [job] job monitor thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:16,982 | INFO     | [job] retrieve thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:17,079 | INFO     | all job control threads have been joined
[2025-07-25 08:16:45] 2025-07-24 21:43:17,235 | INFO     | [payload] validate_post thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:17,300 | INFO     | [data] copytool_in thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:17,477 | INFO     | all payload control threads have been joined
[2025-07-25 08:16:45] 2025-07-24 21:43:17,481 | INFO     | [data] control thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:17,787 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:17,824 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:17,895 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:17,988 | INFO     | [data] copytool_out thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:18,085 | INFO     | [job] control thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:18,338 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 08:16:45] 2025-07-24 21:43:18,375 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:18,415 | INFO     | [payload] failed_post thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:18,437 | INFO     | [job] validate thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:18,483 | INFO     | [payload] control thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:19,344 | INFO     | [job] queue monitor thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:19,992 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 08:16:45] 2025-07-24 21:43:20,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139907609610048)>', '<ExcThread(monitor, started 139907301349120)>']
[2025-07-25 08:16:45] 2025-07-24 21:43:25,260 | INFO     | all workflow threads have been joined
[2025-07-25 08:16:45] 2025-07-24 21:43:25,260 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 08:16:45] 2025-07-24 21:43:25,260 | INFO     | traces error code: 0
[2025-07-25 08:16:45] 2025-07-24 21:43:25,260 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 08:16:45] 2025-07-24 21:43:45,593 | INFO     | PID=5712 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-25 08:16:45] 2025-07-24 21:43:45,594 | INFO     | .. there are 9 such processes running
[2025-07-25 08:16:45] 2025-07-24 21:43:45,594 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 08:16:45] 2025-07-24 21:43:45,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 08:16:45] 2025-07-24 21:43:45,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 08:16:45] 2025-07-24 21:43:45,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 08:16:45] 2025-07-24 21:43:45,595 | CRITICAL | thread 'MainThread' is not alive
[2025-07-25 08:16:45] 2025-07-24 21:43:45,595 | INFO     | [monitor] control thread has ended
[2025-07-25 08:16:45] 2025-07-24 21:43:45,973 [wrapper] ==== pilot stdout END ====
[2025-07-25 08:16:45] 2025-07-24 21:43:46,094 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 08:16:45] 2025-07-24 21:43:46,205 [wrapper] pilotpid: 5712
[2025-07-25 08:16:45] 2025-07-24 21:43:46,318 [wrapper] Pilot exit status: 0
[2025-07-25 08:16:45] 2025-07-24 21:43:46,856 [wrapper] pandaids: 6741710337
[2025-07-25 08:16:45] 2025-07-24 21:43:47,815 [wrapper] cleanup supervisor_pilot 28832 5713
[2025-07-25 08:16:45] 2025-07-24 21:43:47,906 [wrapper] Test setup, not cleaning
[2025-07-25 08:16:45] 2025-07-24 21:43:47,973 [wrapper] apfmon messages muted
[2025-07-25 08:16:45] 2025-07-24 21:43:48,082 [wrapper] ==== wrapper stdout END ====
[2025-07-25 08:16:45] 2025-07-24 21:43:48,204 [wrapper] ==== wrapper stderr END ====
[2025-07-25 08:16:45]  *** Error codes and diagnostics ***
[2025-07-25 08:16:45]     "exeErrorCode": 0,
[2025-07-25 08:16:45]     "exeErrorDiag": "",
[2025-07-25 08:16:45]     "pilotErrorCode": 0,
[2025-07-25 08:16:45]     "pilotErrorDiag": "",
[2025-07-25 08:16:45]  *** Listing of results directory ***
[2025-07-25 08:16:45] total 565560
[2025-07-25 08:16:45] -rwx------. 1 boinc boinc     36292 Jul 22 02:55 runpilot2-wrapper.sh
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc      5112 Jul 22 02:55 queuedata.json
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc    530466 Jul 22 02:55 pilot3.tar.gz
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc       100 Jul 24 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 08:16:45] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 18:26 run_atlas
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc       105 Jul 24 18:26 job.xml
[2025-07-25 08:16:45] -rw-r--r--. 2 boinc boinc 319701716 Jul 24 18:26 EVNT.45697451._000073.pool.root.1
[2025-07-25 08:16:45] -rw-r--r--. 2 boinc boinc     15095 Jul 24 18:26 start_atlas.sh
[2025-07-25 08:16:45] drwxrwx--x. 2 boinc boinc        68 Jul 24 18:26 shared
[2025-07-25 08:16:45] -rw-r--r--. 2 boinc boinc    542895 Jul 24 18:26 input.tar.gz
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc      6390 Jul 24 18:26 init_data.xml
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc         0 Jul 24 18:26 boinc_lockfile
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc      2633 Jul 24 18:26 pandaJob.out
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc    979669 Jul 24 18:27 agis_schedconf.cvmfs.json
[2025-07-25 08:16:45] drwx------. 4 boinc boinc      4096 Jul 24 18:27 pilot3
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc 251471696 Jul 24 23:40 HITS.45697453._001821.pool.root.1
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc       530 Jul 24 23:40 boinc_task_state.xml
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc      1018 Jul 24 23:41 memory_monitor_summary.json
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc   1593052 Jul 24 23:41 agis_ddmendpoints.agis.ALL.json
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc    436742 Jul 24 23:41 log.45697453._001821.job.log.tgz.1
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc        95 Jul 24 23:42 pilot_heartbeat.json
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc      7776 Jul 24 23:43 heartbeat.json
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc       889 Jul 24 23:43 pilotlog.txt
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc   1612790 Jul 24 23:43 log.45697453._001821.job.log.1
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc       357 Jul 24 23:43 output.list
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc       620 Jul 24 23:43 runtime_log
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc   2068480 Jul 24 23:43 result.tar.gz
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc       657 Jul 24 23:43 yQ3NDmYTGy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmL2tKDmSHTYwm.diag
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc      8660 Jul 24 23:43 runtime_log.err
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc      8192 Jul 25 08:16 boinc_mmap_file
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc        28 Jul 25 08:16 wrapper_checkpoint.txt
[2025-07-25 08:16:45] -rw-r--r--. 1 boinc boinc     20589 Jul 25 08:16 stderr.txt
[2025-07-25 08:16:45] HITS file was successfully produced:
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc 251471696 Jul 24 23:40 shared/HITS.pool.root.1
[2025-07-25 08:16:45]  *** Contents of shared directory: ***
[2025-07-25 08:16:45] total 560360
[2025-07-25 08:16:45] -rw-r--r--. 2 boinc boinc 319701716 Jul 24 18:26 ATLAS.root_0
[2025-07-25 08:16:45] -rw-r--r--. 2 boinc boinc     15095 Jul 24 18:26 start_atlas.sh
[2025-07-25 08:16:45] -rw-r--r--. 2 boinc boinc    542895 Jul 24 18:26 input.tar.gz
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc 251471696 Jul 24 23:40 HITS.pool.root.1
[2025-07-25 08:16:45] -rw-------. 1 boinc boinc   2068480 Jul 24 23:43 result.tar.gz
08:16:47 (1693): run_atlas exited; CPU time 73821.120952
08:16:47 (1693): called boinc_finish(0)

</stderr_txt>
]]>

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