Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:55:14 (339885): wrapper (7.7.26015): starting
20:55:14 (339885): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 20:55:14] Arguments: --nthreads 8
[2025-07-23 20:55:14] Threads: 8
[2025-07-23 20:55:14] Checking for CVMFS
[2025-07-23 20:55:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 20:55:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 20:55:15] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 20:55:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 20:55:15] 2.13.1.0 704839 9109 202600 148676 0 447 36925488 40960001 19493 16776704 0 19494218 99.814 16585581 43848 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 20:55:15] CVMFS is ok
[2025-07-23 20:55:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 20:55:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 20:55:15] Further information can be found at the LHC@home message board.
[2025-07-23 20:55:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 20:55:15] Checking for apptainer binary...
[2025-07-23 20:55:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 20:55:15] Running /usr/bin/apptainer --version
[2025-07-23 20:55:15] apptainer version 1.4.1-1.el9
[2025-07-23 20:55:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 20:55:16] c-212-4.aglt2.org
[2025-07-23 20:55:16] apptainer works
[2025-07-23 20:55:16] Set ATHENA_PROC_NUMBER=8
[2025-07-23 20:55:16] Set ATHENA_CORE_NUMBER=8
[2025-07-23 20:55:16] Starting ATLAS job with PandaID=6743225079
[2025-07-23 20:55:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 23:54:46]  *** The last 200 lines of the pilot log: ***
[2025-07-23 23:54:46] 2025-07-24 03:54:09,005 | INFO     | .. there are 15 such processes running
[2025-07-23 23:54:46] 2025-07-24 03:54:10,647 | INFO     | monitor loop #744: job 0:6743225079 is in state 'finished'
[2025-07-23 23:54:46] 2025-07-24 03:54:10,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 23:54:46] 2025-07-24 03:54:12,878 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 23:54:46] 2025-07-24 03:54:12,885 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2991.51203125
[2025-07-23 23:54:46] 2025-07-24 03:54:12,900 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743225079/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 23:54:46] 2025-07-24 03:54:12,901 | INFO     | extracted standard info from prmon json
[2025-07-23 23:54:46] 2025-07-24 03:54:12,901 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 23:54:46] 2025-07-24 03:54:12,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 23:54:46] 2025-07-24 03:54:12,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 23:54:46] 2025-07-24 03:54:12,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 23:54:46] 2025-07-24 03:54:12,905 | INFO     | fitting pss+swap vs Time
[2025-07-23 23:54:46] 2025-07-24 03:54:12,907 | INFO     | sum of square deviations: 1633472487.5
[2025-07-23 23:54:46] 2025-07-24 03:54:12,908 | INFO     | sum of deviations: 6765197161.500007
[2025-07-23 23:54:46] 2025-07-24 03:54:12,908 | INFO     | mean x: 1753323909.5
[2025-07-23 23:54:46] 2025-07-24 03:54:12,908 | INFO     | mean y: 2542177.9022988505
[2025-07-23 23:54:46] 2025-07-24 03:54:12,908 | INFO     | -- intersect: -7259032183.777603
[2025-07-23 23:54:46] 2025-07-24 03:54:12,908 | INFO     | intersect: -7259032183.777603
[2025-07-23 23:54:46] 2025-07-24 03:54:12,909 | INFO     | chi2: 1.626418987551898
[2025-07-23 23:54:46] 2025-07-24 03:54:12,909 | INFO     | sum of square deviations: 1496660620.0
[2025-07-23 23:54:46] 2025-07-24 03:54:12,910 | INFO     | sum of deviations: 6509011649.000003
[2025-07-23 23:54:46] 2025-07-24 03:54:12,910 | INFO     | mean x: 1753323757.0
[2025-07-23 23:54:46] 2025-07-24 03:54:12,910 | INFO     | mean y: 2541892.2840236686
[2025-07-23 23:54:46] 2025-07-24 03:54:12,910 | INFO     | -- intersect: -7622703675.265854
[2025-07-23 23:54:46] 2025-07-24 03:54:12,910 | INFO     | intersect: -7622703675.265854
[2025-07-23 23:54:46] 2025-07-24 03:54:12,910 | INFO     | chi2: 1.6271828916663615
[2025-07-23 23:54:46] 2025-07-24 03:54:12,914 | INFO     | current chi2=1.6271828916663615 (change=-0.04696847001358631 %)
[2025-07-23 23:54:46] 2025-07-24 03:54:12,915 | INFO     | right removable region: 168
[2025-07-23 23:54:46] 2025-07-24 03:54:12,915 | INFO     | sum of square deviations: 1496660620.0
[2025-07-23 23:54:46] 2025-07-24 03:54:12,917 | INFO     | sum of deviations: -17579288843.000004
[2025-07-23 23:54:46] 2025-07-24 03:54:12,917 | INFO     | mean x: 1753324062.0
[2025-07-23 23:54:46] 2025-07-24 03:54:12,917 | INFO     | mean y: 2568879.3372781067
[2025-07-23 23:54:46] 2025-07-24 03:54:12,917 | INFO     | -- intersect: 20596543030.45782
[2025-07-23 23:54:46] 2025-07-24 03:54:12,917 | INFO     | intersect: 20596543030.45782
[2025-07-23 23:54:46] 2025-07-24 03:54:12,917 | INFO     | chi2: 0.17901292793359003
[2025-07-23 23:54:46] 2025-07-24 03:54:12,918 | INFO     | current chi2=0.17901292793359003 (change=88.99343100986285 %)
[2025-07-23 23:54:46] 2025-07-24 03:54:12,918 | INFO     | sum of square deviations: 1367709365.0
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | sum of deviations: -11188379263.500002
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | mean x: 1753324214.5
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | mean y: 2561271.68902439
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | -- intersect: 14345415671.68374
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | intersect: 14345415671.68374
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | chi2: 0.14011615213047954
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | current chi2=0.14011615213047954 (change=21.728473050583457 %)
[2025-07-23 23:54:46] 2025-07-24 03:54:12,919 | INFO     | left removable region: 20
[2025-07-23 23:54:46] 2025-07-24 03:54:12,920 | INFO     | sum of square deviations: 1005179777.0
[2025-07-23 23:54:46] 2025-07-24 03:54:12,920 | INFO     | sum of deviations: 2147342282.5000005
[2025-07-23 23:54:46] 2025-07-24 03:54:12,920 | INFO     | mean x: 1753324336.5
[2025-07-23 23:54:46] 2025-07-24 03:54:12,921 | INFO     | mean y: 2543593.6824324327
[2025-07-23 23:54:46] 2025-07-24 03:54:12,921 | INFO     | -- intersect: -3743042587.865576
[2025-07-23 23:54:46] 2025-07-24 03:54:12,921 | INFO     | intersect: -3743042587.865576
[2025-07-23 23:54:46] 2025-07-24 03:54:12,921 | INFO     | chi2: 0.0017275296165799741
[2025-07-23 23:54:46] 2025-07-24 03:54:12,921 | INFO     | -- intersect: -3743042587.865576
[2025-07-23 23:54:46] 2025-07-24 03:54:12,921 | INFO     | current memory leak: 2.14 B/s (using 148 data points, chi2=0.00)
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | could have reported an average CPU frequency of 3021 MHz (9 samples)
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | ..............................
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | . Timing measurements:
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | . get job = 0 s
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | . initial setup = 4 s
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | . payload setup = 37 s
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | . stage-in = 0 s
[2025-07-23 23:54:46] 2025-07-24 03:54:12,922 | INFO     | . payload execution = 10619 s
[2025-07-23 23:54:46] 2025-07-24 03:54:12,923 | INFO     | . stage-out = 1 s
[2025-07-23 23:54:46] 2025-07-24 03:54:12,923 | INFO     | . log creation = 0 s
[2025-07-23 23:54:46] 2025-07-24 03:54:12,923 | INFO     | ..............................
[2025-07-23 23:54:46] 2025-07-24 03:54:13,019 | INFO     | 
[2025-07-23 23:54:46] 2025-07-24 03:54:13,019 | INFO     | job summary report
[2025-07-23 23:54:46] 2025-07-24 03:54:13,019 | INFO     | --------------------------------------------------
[2025-07-23 23:54:46] 2025-07-24 03:54:13,019 | INFO     | PanDA job id: 6743225079
[2025-07-23 23:54:46] 2025-07-24 03:54:13,019 | INFO     | task id: 45668757
[2025-07-23 23:54:46] 2025-07-24 03:54:13,019 | INFO     | errors: (none)
[2025-07-23 23:54:46] 2025-07-24 03:54:13,019 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | pilot state: finished 
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | transexitcode: 0
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | exeerrorcode: 0
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | exeerrordiag: 
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | exitcode: 0
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | exitmsg: OK
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | cpuconsumptiontime: 48578 s
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | nevents: 400
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | neventsw: 0
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | pid: 351450
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | pgrp: 351450
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | corecount: 8
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | event service: False
[2025-07-23 23:54:46] 2025-07-24 03:54:13,020 | INFO     | sizes: {0: 2397263, 1: 2397462, 11: 2397462, 12: 2397752, 22: 2397780, 10661: 2427033, 10664: 2436031, 10666: 2436087, 10674: 2436345}
[2025-07-23 23:54:46] 2025-07-24 03:54:13,021 | INFO     | --------------------------------------------------
[2025-07-23 23:54:46] 2025-07-24 03:54:13,021 | INFO     | 
[2025-07-23 23:54:46] 2025-07-24 03:54:13,021 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 23:54:46] 2025-07-24 03:54:13,058 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,059 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 23:54:46] 2025-07-24 03:54:13,061 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,061 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 23:54:46] 2025-07-24 03:54:13,061 | INFO     | job 6743225079 has completed (purged errors)
[2025-07-23 23:54:46] 2025-07-24 03:54:13,061 | INFO     | overall cleanup function is called
[2025-07-23 23:54:46] 2025-07-24 03:54:14,071 | INFO     | --- collectZombieJob: --- 10, [351450]
[2025-07-23 23:54:46] 2025-07-24 03:54:14,071 | INFO     | zombie collector waiting for pid 351450
[2025-07-23 23:54:46] 2025-07-24 03:54:14,071 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 23:54:46] 2025-07-24 03:54:14,071 | INFO     | collected zombie processes
[2025-07-23 23:54:46] 2025-07-24 03:54:14,071 | INFO     | will attempt to kill all subprocesses of pid=351450
[2025-07-23 23:54:46] 2025-07-24 03:54:14,968 | INFO     | process IDs to be killed: [351450] (in reverse order)
[2025-07-23 23:54:46] 2025-07-24 03:54:15,104 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 23:54:46] 2025-07-24 03:54:15,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 23:54:46] 2025-07-24 03:54:15,129 | INFO     | did not find any defunct processes belonging to 351450
[2025-07-23 23:54:46] 2025-07-24 03:54:15,158 | INFO     | did not find any defunct processes belonging to 351450
[2025-07-23 23:54:46] 2025-07-24 03:54:15,158 | INFO     | ready for new job
[2025-07-23 23:54:46] 2025-07-24 03:54:15,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 23:54:46] 2025-07-24 03:54:15,160 | INFO     | ***************************************
[2025-07-23 23:54:46] 2025-07-24 03:54:15,160 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 23:54:46] 2025-07-24 03:54:15,160 | INFO     | ***************************************
[2025-07-23 23:54:46] 2025-07-24 03:54:15,160 | INFO     | 
[2025-07-23 23:54:46] 2025-07-24 03:54:15,173 | INFO     | architecture information:
[2025-07-23 23:54:46] 2025-07-24 03:54:15,178 | INFO     | executing command: cat /etc/os-release
[2025-07-23 23:54:46] 2025-07-24 03:54:15,206 | INFO     | cat /etc/os-release:
[2025-07-23 23:54:46] NAME="CentOS Linux"
[2025-07-23 23:54:46] VERSION="7 (Core)"
[2025-07-23 23:54:46] ID="centos"
[2025-07-23 23:54:46] ID_LIKE="rhel fedora"
[2025-07-23 23:54:46] VERSION_ID="7"
[2025-07-23 23:54:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 23:54:46] ANSI_COLOR="0;31"
[2025-07-23 23:54:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 23:54:46] HOME_URL="https://www.centos.org/"
[2025-07-23 23:54:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 23:54:46] 
[2025-07-23 23:54:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 23:54:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 23:54:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 23:54:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 23:54:46] 
[2025-07-23 23:54:46] 2025-07-24 03:54:15,206 | INFO     | ***************************************
[2025-07-23 23:54:46] 2025-07-24 03:54:15,710 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 23:54:46] 2025-07-24 03:54:15,731 | INFO     | sufficient remaining disk space (128399179776 B)
[2025-07-23 23:54:46] 2025-07-24 03:54:15,732 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 23:54:46] 2025-07-24 03:54:15,732 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 23:54:46] 2025-07-24 03:54:15,732 | INFO     | update_server=False
[2025-07-23 23:54:46] 2025-07-24 03:54:15,732 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 23:54:46] 2025-07-24 03:54:15,734 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 23:54:46] 2025-07-24 03:54:15,734 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 23:54:46] 2025-07-24 03:54:15,755 | INFO     | all payload control threads have been joined
[2025-07-23 23:54:46] 2025-07-24 03:54:16,259 | INFO     | all data control threads have been joined
[2025-07-23 23:54:46] 2025-07-24 03:54:16,698 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 23:54:46] 2025-07-24 03:54:16,698 | INFO     | aborting loop
[2025-07-23 23:54:46] 2025-07-24 03:54:16,739 | INFO     | [job] retrieve thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:16,756 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:16,763 | INFO     | [payload] control thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:16,988 | INFO     | all job control threads have been joined
[2025-07-23 23:54:46] 2025-07-24 03:54:17,264 | INFO     | [data] control thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,578 | INFO     | [job] validate thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,590 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,607 | INFO     | [data] copytool_in thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,608 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,704 | INFO     | [job] job monitor thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,741 | INFO     | [data] copytool_out thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,795 | INFO     | [payload] validate_post thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:17,996 | INFO     | [job] control thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:18,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 23:54:46] 2025-07-24 03:54:18,143 | INFO     | [payload] failed_post thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:19,038 | INFO     | [job] queue monitor thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:19,753 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:26,152 | INFO     | job.realtimelogging is not enabled
[2025-07-23 23:54:46] 2025-07-24 03:54:27,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 23:54:46] 2025-07-24 03:54:28,705 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472851670848)>', '<ExcThread(monitor, started 140472500594432)>']
[2025-07-23 23:54:46] 2025-07-24 03:54:33,733 | INFO     | all workflow threads have been joined
[2025-07-23 23:54:46] 2025-07-24 03:54:33,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 23:54:46] 2025-07-24 03:54:33,733 | INFO     | traces error code: 0
[2025-07-23 23:54:46] 2025-07-24 03:54:33,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 23:54:46] 2025-07-24 03:54:46,295 | INFO     | PID=343654 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 23:54:46] 2025-07-24 03:54:46,304 | INFO     | .. there are 15 such processes running
[2025-07-23 23:54:46] 2025-07-24 03:54:46,306 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 23:54:46] 2025-07-24 03:54:46,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 23:54:46] 2025-07-24 03:54:46,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 23:54:46] 2025-07-24 03:54:46,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 23:54:46] 2025-07-24 03:54:46,307 | INFO     | [monitor] control thread has ended
[2025-07-23 23:54:46] 2025-07-24 03:54:46,521 [wrapper] ==== pilot stdout END ====
[2025-07-23 23:54:46] 2025-07-24 03:54:46,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 23:54:46] 2025-07-24 03:54:46,536 [wrapper] pilotpid: 343654
[2025-07-23 23:54:46] 2025-07-24 03:54:46,566 [wrapper] Pilot exit status: 0
[2025-07-23 23:54:46] 2025-07-24 03:54:46,593 [wrapper] pandaids: 6743225079
[2025-07-23 23:54:46] 2025-07-24 03:54:46,744 [wrapper] cleanup supervisor_pilot  659001 343655
[2025-07-23 23:54:46] 2025-07-24 03:54:46,748 [wrapper] Test setup, not cleaning
[2025-07-23 23:54:46] 2025-07-24 03:54:46,752 [wrapper] apfmon messages muted
[2025-07-23 23:54:46] 2025-07-24 03:54:46,756 [wrapper] ==== wrapper stdout END ====
[2025-07-23 23:54:46] 2025-07-24 03:54:46,759 [wrapper] ==== wrapper stderr END ====
[2025-07-23 23:54:46]  *** Error codes and diagnostics ***
[2025-07-23 23:54:46]     "exeErrorCode": 0,
[2025-07-23 23:54:46]     "exeErrorDiag": "",
[2025-07-23 23:54:46]     "pilotErrorCode": 0,
[2025-07-23 23:54:46]     "pilotErrorDiag": "",
[2025-07-23 23:54:46]  *** Listing of results directory ***
[2025-07-23 23:54:46] total 469196
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 11:36 pilot3.tar.gz
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 11:51 queuedata.json
[2025-07-23 23:54:46] -rwx------. 1 boincer umatlas     36292 Jul 23 11:52 runpilot2-wrapper.sh
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas       100 Jul 23 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 23:54:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 20:55 run_atlas
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas       105 Jul 23 20:55 job.xml
[2025-07-23 23:54:46] -rw-r--r--. 2 boincer umatlas 279388310 Jul 23 20:55 EVNT.45668754._000043.pool.root.1
[2025-07-23 23:54:46] -rw-r--r--. 2 boincer umatlas    542887 Jul 23 20:55 input.tar.gz
[2025-07-23 23:54:46] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 20:55 start_atlas.sh
[2025-07-23 23:54:46] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 20:55 shared
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas         0 Jul 23 20:55 boinc_lockfile
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas      2541 Jul 23 20:55 pandaJob.out
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas    979632 Jul 23 20:55 agis_schedconf.cvmfs.json
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas   1593041 Jul 23 20:55 agis_ddmendpoints.agis.ALL.json
[2025-07-23 23:54:46] drwx------. 4 boincer umatlas      4096 Jul 23 20:55 pilot3
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas 194526661 Jul 23 23:53 HITS.45668757._001087.pool.root.1
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas       531 Jul 23 23:53 boinc_task_state.xml
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas      1034 Jul 23 23:53 memory_monitor_summary.json
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas    375410 Jul 23 23:54 log.45668757._001087.job.log.tgz.1
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas      7771 Jul 23 23:54 heartbeat.json
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas      6944 Jul 23 23:54 init_data.xml
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 23:54 boinc_mmap_file
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas        28 Jul 23 23:54 wrapper_checkpoint.txt
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas        95 Jul 23 23:54 pilot_heartbeat.json
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas       822 Jul 23 23:54 pilotlog.txt
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas    958566 Jul 23 23:54 log.45668757._001087.job.log.1
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas       357 Jul 23 23:54 output.list
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas       620 Jul 23 23:54 runtime_log
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas   1351680 Jul 23 23:54 result.tar.gz
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas      8656 Jul 23 23:54 runtime_log.err
[2025-07-23 23:54:46] -rw-------. 1 boincer umatlas       656 Jul 23 23:54 NxjKDmKwqy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmvqLLDmfmv9dn.diag
[2025-07-23 23:54:46] -rw-r--r--. 1 boincer umatlas     21133 Jul 23 23:54 stderr.txt
[2025-07-23 23:54:46] HITS file was successfully produced:
[2025-07-23 23:54:47] -rw-------. 1 boincer umatlas 194526661 Jul 23 23:53 shared/HITS.pool.root.1
[2025-07-23 23:54:47]  *** Contents of shared directory: ***
[2025-07-23 23:54:47] total 464684
[2025-07-23 23:54:47] -rw-r--r--. 2 boincer umatlas 279388310 Jul 23 20:55 ATLAS.root_0
[2025-07-23 23:54:47] -rw-r--r--. 2 boincer umatlas    542887 Jul 23 20:55 input.tar.gz
[2025-07-23 23:54:47] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 20:55 start_atlas.sh
[2025-07-23 23:54:47] -rw-------. 1 boincer umatlas 194526661 Jul 23 23:53 HITS.pool.root.1
[2025-07-23 23:54:47] -rw-------. 1 boincer umatlas   1351680 Jul 23 23:54 result.tar.gz
23:55:08 (339885): run_atlas exited; CPU time 48841.800444
23:55:08 (339885): called boinc_finish(0)

</stderr_txt>
]]>

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