Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:17:57 (337602): wrapper (7.7.26015): starting
20:17:57 (337602): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 20:17:57] Arguments: --nthreads 12
[2025-07-23 20:17:57] Threads: 12
[2025-07-23 20:17:57] Checking for CVMFS
[2025-07-23 20:17:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 20:17:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 20:17:59] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 20:18:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 20:18:01] 2.13.1.0 128577 45 60620 148676 2 13 3682643 39288832 8110 16776704 0 126547 94.994 1724816 69731 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 20:18:01] CVMFS is ok
[2025-07-23 20:18:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 20:18:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 20:18:01] Further information can be found at the LHC@home message board.
[2025-07-23 20:18:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 20:18:01] Checking for apptainer binary...
[2025-07-23 20:18:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 20:18:01] Running /usr/bin/apptainer --version
[2025-07-23 20:18:01] apptainer version 1.4.1-1.el9
[2025-07-23 20:18:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 20:18:03] c-210-30.aglt2.org
[2025-07-23 20:18:03] apptainer works
[2025-07-23 20:18:03] Set ATHENA_PROC_NUMBER=12
[2025-07-23 20:18:03] Set ATHENA_CORE_NUMBER=12
[2025-07-23 20:18:03] Starting ATLAS job with PandaID=6742513259
[2025-07-23 20:18:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 04:06:53]  *** The last 200 lines of the pilot log: ***
[2025-07-24 04:06:53] 2025-07-24 08:06:16,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 04:06:53] 2025-07-24 08:06:19,492 | INFO     | monitor loop #1667: job 0:6742513259 is in state 'finished'
[2025-07-24 04:06:53] 2025-07-24 08:06:19,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,191 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 04:06:53] 2025-07-24 08:06:20,198 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8130499999997
[2025-07-24 04:06:53] 2025-07-24 08:06:20,207 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6742513259/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,208 | INFO     | extracted standard info from prmon json
[2025-07-24 04:06:53] 2025-07-24 08:06:20,208 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 04:06:53] 2025-07-24 08:06:20,208 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 04:06:53] 2025-07-24 08:06:20,208 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 04:06:53] 2025-07-24 08:06:20,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 04:06:53] 2025-07-24 08:06:20,217 | INFO     | fitting pss+swap vs Time
[2025-07-24 04:06:53] 2025-07-24 08:06:20,218 | INFO     | sum of square deviations: 29593796933.56236
[2025-07-24 04:06:53] 2025-07-24 08:06:20,224 | INFO     | sum of deviations: 31479659675.081013
[2025-07-24 04:06:53] 2025-07-24 08:06:20,224 | INFO     | mean x: 1753330451.750547
[2025-07-24 04:06:53] 2025-07-24 08:06:20,224 | INFO     | mean y: 2808192.6761487965
[2025-07-24 04:06:53] 2025-07-24 08:06:20,224 | INFO     | -- intersect: -1862253125.510684
[2025-07-24 04:06:53] 2025-07-24 08:06:20,224 | INFO     | intersect: -1862253125.510684
[2025-07-24 04:06:53] 2025-07-24 08:06:20,225 | INFO     | chi2: 4.470928830836764
[2025-07-24 04:06:53] 2025-07-24 08:06:20,226 | INFO     | sum of square deviations: 28633028143.741077
[2025-07-24 04:06:53] 2025-07-24 08:06:20,231 | INFO     | sum of deviations: 63343967086.878265
[2025-07-24 04:06:53] 2025-07-24 08:06:20,232 | INFO     | mean x: 1753330299.2544248
[2025-07-24 04:06:53] 2025-07-24 08:06:20,232 | INFO     | mean y: 2813204.4358407077
[2025-07-24 04:06:53] 2025-07-24 08:06:20,232 | INFO     | -- intersect: -3876025464.3507876
[2025-07-24 04:06:53] 2025-07-24 08:06:20,232 | INFO     | intersect: -3876025464.3507876
[2025-07-24 04:06:53] 2025-07-24 08:06:20,233 | INFO     | chi2: 3.7833765996114046
[2025-07-24 04:06:53] 2025-07-24 08:06:20,233 | INFO     | current chi2=3.7833765996114046 (change=15.378286195995633 %)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,233 | INFO     | right removable region: 451
[2025-07-24 04:06:53] 2025-07-24 08:06:20,234 | INFO     | sum of square deviations: 28632874300.714478
[2025-07-24 04:06:53] 2025-07-24 08:06:20,239 | INFO     | sum of deviations: -115494385852.75443
[2025-07-24 04:06:53] 2025-07-24 08:06:20,240 | INFO     | mean x: 1753330604.2588496
[2025-07-24 04:06:53] 2025-07-24 08:06:20,240 | INFO     | mean y: 2831486.1261061947
[2025-07-24 04:06:53] 2025-07-24 08:06:20,240 | INFO     | -- intersect: 7075116273.499397
[2025-07-24 04:06:53] 2025-07-24 08:06:20,240 | INFO     | intersect: 7075116273.499397
[2025-07-24 04:06:53] 2025-07-24 08:06:20,241 | INFO     | chi2: 1.3718539486751764
[2025-07-24 04:06:53] 2025-07-24 08:06:20,241 | INFO     | current chi2=1.3718539486751764 (change=69.31613092981341 %)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,241 | INFO     | sum of square deviations: 27693003134.335476
[2025-07-24 04:06:53] 2025-07-24 08:06:20,247 | INFO     | sum of deviations: -150458112471.58377
[2025-07-24 04:06:53] 2025-07-24 08:06:20,247 | INFO     | mean x: 1753330756.7651007
[2025-07-24 04:06:53] 2025-07-24 08:06:20,247 | INFO     | mean y: 2837149.3087248323
[2025-07-24 04:06:53] 2025-07-24 08:06:20,247 | INFO     | -- intersect: 9528811451.2497
[2025-07-24 04:06:53] 2025-07-24 08:06:20,247 | INFO     | intersect: 9528811451.2497
[2025-07-24 04:06:53] 2025-07-24 08:06:20,248 | INFO     | chi2: 1.1608976573357386
[2025-07-24 04:06:53] 2025-07-24 08:06:20,248 | INFO     | current chi2=1.1608976573357386 (change=15.37745993610778 %)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,248 | INFO     | left removable region: 20
[2025-07-24 04:06:53] 2025-07-24 08:06:20,249 | INFO     | sum of square deviations: 24824307690.25985
[2025-07-24 04:06:53] 2025-07-24 08:06:20,253 | INFO     | sum of deviations: -106092182506.18109
[2025-07-24 04:06:53] 2025-07-24 08:06:20,254 | INFO     | mean x: 1753330878.7703016
[2025-07-24 04:06:53] 2025-07-24 08:06:20,254 | INFO     | mean y: 2840661.392111369
[2025-07-24 04:06:53] 2025-07-24 08:06:20,254 | INFO     | -- intersect: 7496088888.29864
[2025-07-24 04:06:53] 2025-07-24 08:06:20,254 | INFO     | intersect: 7496088888.29864
[2025-07-24 04:06:53] 2025-07-24 08:06:20,255 | INFO     | chi2: 0.40082324124606805
[2025-07-24 04:06:53] 2025-07-24 08:06:20,255 | INFO     | -- intersect: 7496088888.29864
[2025-07-24 04:06:53] 2025-07-24 08:06:20,255 | INFO     | current memory leak: -4.27 B/s (using 431 data points, chi2=0.40)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,256 | INFO     | could have reported an average CPU frequency of 2580 MHz (19 samples)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,256 | INFO     | ..............................
[2025-07-24 04:06:53] 2025-07-24 08:06:20,256 | INFO     | . Timing measurements:
[2025-07-24 04:06:53] 2025-07-24 08:06:20,256 | INFO     | . get job = 0 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,257 | INFO     | . initial setup = 7 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,257 | INFO     | . payload setup = 59 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,257 | INFO     | . stage-in = 0 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,257 | INFO     | . payload execution = 27858 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,257 | INFO     | . stage-out = 2 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,257 | INFO     | . log creation = 0 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,257 | INFO     | ..............................
[2025-07-24 04:06:53] 2025-07-24 08:06:20,547 | INFO     | 
[2025-07-24 04:06:53] 2025-07-24 08:06:20,547 | INFO     | job summary report
[2025-07-24 04:06:53] 2025-07-24 08:06:20,547 | INFO     | --------------------------------------------------
[2025-07-24 04:06:53] 2025-07-24 08:06:20,547 | INFO     | PanDA job id: 6742513259
[2025-07-24 04:06:53] 2025-07-24 08:06:20,547 | INFO     | task id: 45697453
[2025-07-24 04:06:53] 2025-07-24 08:06:20,547 | INFO     | errors: (none)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,547 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | pilot state: finished 
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | transexitcode: 0
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | exeerrorcode: 0
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | exeerrordiag: 
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | exitcode: 0
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | exitmsg: OK
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | cpuconsumptiontime: 74360 s
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | nevents: 400
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | neventsw: 0
[2025-07-24 04:06:53] 2025-07-24 08:06:20,548 | INFO     | pid: 350803
[2025-07-24 04:06:53] 2025-07-24 08:06:20,549 | INFO     | pgrp: 350803
[2025-07-24 04:06:53] 2025-07-24 08:06:20,549 | INFO     | corecount: 12
[2025-07-24 04:06:53] 2025-07-24 08:06:20,549 | INFO     | event service: False
[2025-07-24 04:06:53] 2025-07-24 08:06:20,549 | INFO     | sizes: {0: 2396674, 1: 2397359, 2: 2397359, 3: 2397558, 4: 2397586, 5: 2397614, 15: 2397798, 27: 2397826, 38: 2397854, 41: 2398144, 49: 2398172, 27918: 2435008, 27
[2025-07-24 04:06:53] 2025-07-24 08:06:20,549 | INFO     | --------------------------------------------------
[2025-07-24 04:06:53] 2025-07-24 08:06:20,549 | INFO     | 
[2025-07-24 04:06:53] 2025-07-24 08:06:20,549 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-24 04:06:53] 2025-07-24 08:06:20,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 04:06:53] 2025-07-24 08:06:20,573 | INFO     | job 6742513259 has completed (purged errors)
[2025-07-24 04:06:53] 2025-07-24 08:06:20,573 | INFO     | overall cleanup function is called
[2025-07-24 04:06:53] 2025-07-24 08:06:21,583 | INFO     | --- collectZombieJob: --- 10, [350803]
[2025-07-24 04:06:53] 2025-07-24 08:06:21,583 | INFO     | zombie collector waiting for pid 350803
[2025-07-24 04:06:53] 2025-07-24 08:06:21,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 04:06:53] 2025-07-24 08:06:21,583 | INFO     | collected zombie processes
[2025-07-24 04:06:53] 2025-07-24 08:06:21,583 | INFO     | will attempt to kill all subprocesses of pid=350803
[2025-07-24 04:06:53] 2025-07-24 08:06:21,800 | INFO     | process IDs to be killed: [350803] (in reverse order)
[2025-07-24 04:06:53] 2025-07-24 08:06:21,871 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 04:06:53] 2025-07-24 08:06:21,872 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 04:06:53] 2025-07-24 08:06:21,880 | INFO     | did not find any defunct processes belonging to 350803
[2025-07-24 04:06:53] 2025-07-24 08:06:21,888 | INFO     | did not find any defunct processes belonging to 350803
[2025-07-24 04:06:53] 2025-07-24 08:06:21,889 | INFO     | ready for new job
[2025-07-24 04:06:53] 2025-07-24 08:06:21,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 04:06:53] 2025-07-24 08:06:21,892 | INFO     | ***************************************
[2025-07-24 04:06:53] 2025-07-24 08:06:21,892 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 04:06:53] 2025-07-24 08:06:21,892 | INFO     | ***************************************
[2025-07-24 04:06:53] 2025-07-24 08:06:21,892 | INFO     | 
[2025-07-24 04:06:53] 2025-07-24 08:06:21,894 | INFO     | architecture information:
[2025-07-24 04:06:53] 2025-07-24 08:06:21,895 | INFO     | executing command: cat /etc/os-release
[2025-07-24 04:06:53] 2025-07-24 08:06:21,910 | INFO     | cat /etc/os-release:
[2025-07-24 04:06:53] NAME="CentOS Linux"
[2025-07-24 04:06:53] VERSION="7 (Core)"
[2025-07-24 04:06:53] ID="centos"
[2025-07-24 04:06:53] ID_LIKE="rhel fedora"
[2025-07-24 04:06:53] VERSION_ID="7"
[2025-07-24 04:06:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 04:06:53] ANSI_COLOR="0;31"
[2025-07-24 04:06:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 04:06:53] HOME_URL="https://www.centos.org/"
[2025-07-24 04:06:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 04:06:53] 
[2025-07-24 04:06:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 04:06:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 04:06:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 04:06:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 04:06:53] 
[2025-07-24 04:06:53] 2025-07-24 08:06:21,910 | INFO     | ***************************************
[2025-07-24 04:06:53] 2025-07-24 08:06:22,414 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-24 04:06:53] 2025-07-24 08:06:22,434 | INFO     | sufficient remaining disk space (52341768192 B)
[2025-07-24 04:06:53] 2025-07-24 08:06:22,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 04:06:53] 2025-07-24 08:06:22,435 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 04:06:53] 2025-07-24 08:06:22,435 | INFO     | update_server=False
[2025-07-24 04:06:53] 2025-07-24 08:06:22,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 04:06:53] 2025-07-24 08:06:22,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 04:06:53] 2025-07-24 08:06:22,759 | INFO     | all data control threads have been joined
[2025-07-24 04:06:53] 2025-07-24 08:06:23,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 04:06:53] 2025-07-24 08:06:23,001 | INFO     | aborting loop
[2025-07-24 04:06:53] 2025-07-24 08:06:23,083 | INFO     | all payload control threads have been joined
[2025-07-24 04:06:53] 2025-07-24 08:06:23,440 | INFO     | [job] retrieve thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:23,531 | INFO     | [payload] failed_post thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:23,532 | INFO     | [job] validate thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:23,764 | INFO     | [data] control thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:23,781 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:23,909 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:23,960 | INFO     | all job control threads have been joined
[2025-07-24 04:06:53] 2025-07-24 08:06:24,007 | INFO     | [job] job monitor thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:24,078 | INFO     | [data] copytool_in thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:24,088 | INFO     | [payload] control thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:24,219 | INFO     | [payload] validate_post thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:24,433 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:24,442 | INFO     | [data] copytool_out thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:24,556 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 04:06:53] 2025-07-24 08:06:24,965 | INFO     | [job] control thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:25,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 04:06:53] 2025-07-24 08:06:26,382 | INFO     | [job] queue monitor thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:28,562 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:33,409 | INFO     | job.realtimelogging is not enabled
[2025-07-24 04:06:53] 2025-07-24 08:06:34,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 04:06:53] 2025-07-24 08:06:34,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125151037248)>', '<ExcThread(monitor, started 140124801177344)>']
[2025-07-24 04:06:53] 2025-07-24 08:06:39,973 | INFO     | all workflow threads have been joined
[2025-07-24 04:06:53] 2025-07-24 08:06:39,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 04:06:53] 2025-07-24 08:06:39,973 | INFO     | traces error code: 0
[2025-07-24 04:06:53] 2025-07-24 08:06:39,974 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 04:06:53] 2025-07-24 08:06:53,396 | INFO     | PID=341429 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-24 04:06:53] 2025-07-24 08:06:53,396 | INFO     | .. there are 6 such processes running
[2025-07-24 04:06:53] 2025-07-24 08:06:53,397 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 04:06:53] 2025-07-24 08:06:53,397 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 04:06:53] 2025-07-24 08:06:53,397 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 04:06:53] 2025-07-24 08:06:53,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 04:06:53] 2025-07-24 08:06:53,397 | INFO     | [monitor] control thread has ended
[2025-07-24 04:06:53] 2025-07-24 08:06:53,598 [wrapper] ==== pilot stdout END ====
[2025-07-24 04:06:53] 2025-07-24 08:06:53,602 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 04:06:53] 2025-07-24 08:06:53,605 [wrapper] pilotpid: 341429
[2025-07-24 04:06:53] 2025-07-24 08:06:53,608 [wrapper] Pilot exit status: 0
[2025-07-24 04:06:53] 2025-07-24 08:06:53,626 [wrapper] pandaids: 6742513259
[2025-07-24 04:06:53] 2025-07-24 08:06:53,679 [wrapper] cleanup supervisor_pilot  848412 341430
[2025-07-24 04:06:53] 2025-07-24 08:06:53,684 [wrapper] Test setup, not cleaning
[2025-07-24 04:06:53] 2025-07-24 08:06:53,688 [wrapper] apfmon messages muted
[2025-07-24 04:06:53] 2025-07-24 08:06:53,691 [wrapper] ==== wrapper stdout END ====
[2025-07-24 04:06:53] 2025-07-24 08:06:53,695 [wrapper] ==== wrapper stderr END ====
[2025-07-24 04:06:53]  *** Error codes and diagnostics ***
[2025-07-24 04:06:53]     "exeErrorCode": 0,
[2025-07-24 04:06:53]     "exeErrorDiag": "",
[2025-07-24 04:06:53]     "pilotErrorCode": 0,
[2025-07-24 04:06:53]     "pilotErrorDiag": "",
[2025-07-24 04:06:53]  *** Listing of results directory ***
[2025-07-24 04:06:53] total 573884
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 08:25 pilot3.tar.gz
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 08:47 queuedata.json
[2025-07-24 04:06:53] -rwx------. 1 boincer umatlas     36292 Jul 23 08:49 runpilot2-wrapper.sh
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas       100 Jul 23 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 04:06:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 20:17 run_atlas
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas       105 Jul 23 20:17 job.xml
[2025-07-24 04:06:53] -rw-r--r--. 2 boincer umatlas 317501338 Jul 23 20:17 EVNT.45697451._000051.pool.root.1
[2025-07-24 04:06:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 20:17 start_atlas.sh
[2025-07-24 04:06:53] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 20:17 shared
[2025-07-24 04:06:53] -rw-r--r--. 2 boincer umatlas    542911 Jul 23 20:17 input.tar.gz
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas         0 Jul 23 20:17 boinc_lockfile
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas      2635 Jul 23 20:18 pandaJob.out
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas    979632 Jul 23 20:19 agis_schedconf.cvmfs.json
[2025-07-24 04:06:53] drwx------. 4 boincer umatlas      4096 Jul 23 20:19 pilot3
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas      6652 Jul 24 04:03 init_data.xml
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas 260745190 Jul 24 04:05 HITS.45697453._006263.pool.root.1
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas       531 Jul 24 04:05 boinc_task_state.xml
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas      1055 Jul 24 04:06 memory_monitor_summary.json
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas   1593041 Jul 24 04:06 agis_ddmendpoints.agis.ALL.json
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas    571461 Jul 24 04:06 log.45697453._006263.job.log.tgz.1
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas      7821 Jul 24 04:06 heartbeat.json
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas      8192 Jul 24 04:06 boinc_mmap_file
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas        28 Jul 24 04:06 wrapper_checkpoint.txt
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas        95 Jul 24 04:06 pilot_heartbeat.json
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas       821 Jul 24 04:06 pilotlog.txt
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas   2198003 Jul 24 04:06 log.45697453._006263.job.log.1
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas       357 Jul 24 04:06 output.list
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas       620 Jul 24 04:06 runtime_log
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas   2785280 Jul 24 04:06 result.tar.gz
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas       657 Jul 24 04:06 sAbMDmK5ny7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3bLLDmK7ugan.diag
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas      8663 Jul 24 04:06 runtime_log.err
[2025-07-24 04:06:53] -rw-r--r--. 1 boincer umatlas     21251 Jul 24 04:06 stderr.txt
[2025-07-24 04:06:53] HITS file was successfully produced:
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas 260745190 Jul 24 04:05 shared/HITS.pool.root.1
[2025-07-24 04:06:53]  *** Contents of shared directory: ***
[2025-07-24 04:06:53] total 567972
[2025-07-24 04:06:53] -rw-r--r--. 2 boincer umatlas 317501338 Jul 23 20:17 ATLAS.root_0
[2025-07-24 04:06:53] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 20:17 start_atlas.sh
[2025-07-24 04:06:53] -rw-r--r--. 2 boincer umatlas    542911 Jul 23 20:17 input.tar.gz
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas 260745190 Jul 24 04:05 HITS.pool.root.1
[2025-07-24 04:06:53] -rw-------. 1 boincer umatlas   2785280 Jul 24 04:06 result.tar.gz
04:06:55 (337602): run_atlas exited; CPU time 75040.724364
04:06:55 (337602): called boinc_finish(0)

</stderr_txt>
]]>

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