Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:47 (29702): wrapper (7.7.26015): starting
11:37:47 (29702): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 11:37:47] Arguments: --nthreads 8
[2025-07-24 11:37:47] Threads: 8
[2025-07-24 11:37:47] Checking for CVMFS
[2025-07-24 11:37:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 11:37:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 11:37:50] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 11:37:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 11:37:50] 2.11.2.0 20081 105052 105512 148689 1 72 16424934 25165824 3615 130560 0 71154371 99.870 46816105 3211 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-24 11:37:50] CVMFS is ok
[2025-07-24 11:37:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 11:37:50] Checking for apptainer binary...
[2025-07-24 11:37:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 11:37:50] Running /usr/bin/apptainer --version
[2025-07-24 11:37:50] apptainer version 1.3.2-1.el7
[2025-07-24 11:37:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 11:37:53] cg-vwn273.simple-grid.lan
[2025-07-24 11:37:53] apptainer works
[2025-07-24 11:37:53] Set ATHENA_PROC_NUMBER=8
[2025-07-24 11:37:53] Set ATHENA_CORE_NUMBER=8
[2025-07-24 11:37:53] Starting ATLAS job with PandaID=6743233057
[2025-07-24 11:37:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 21:20:33]  *** The last 200 lines of the pilot log: ***
[2025-07-24 21:20:33] 2025-07-24 15:12:43,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 21:20:33] 2025-07-24 15:12:43,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 21:20:33] 2025-07-24 15:12:43,686 | INFO     | fitting pss+swap vs Time
[2025-07-24 21:20:33] 2025-07-24 15:12:43,687 | INFO     | sum of square deviations: 10644478650.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,690 | INFO     | sum of deviations: 26485284451.000008
[2025-07-24 21:20:33] 2025-07-24 15:12:43,691 | INFO     | mean x: 1753359959.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,691 | INFO     | mean y: 2490909.4184615384
[2025-07-24 21:20:33] 2025-07-24 15:12:43,691 | INFO     | -- intersect: -4360168717.796697
[2025-07-24 21:20:33] 2025-07-24 15:12:43,691 | INFO     | intersect: -4360168717.796697
[2025-07-24 21:20:33] 2025-07-24 15:12:43,692 | INFO     | chi2: 2.2746541886375655
[2025-07-24 21:20:33] 2025-07-24 15:12:43,692 | INFO     | sum of square deviations: 10160711440.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,696 | INFO     | sum of deviations: 47203756819.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,696 | INFO     | mean x: 1753359806.5
[2025-07-24 21:20:33] 2025-07-24 15:12:43,696 | INFO     | mean y: 2497356.10625
[2025-07-24 21:20:33] 2025-07-24 15:12:43,696 | INFO     | -- intersect: -8143110400.887082
[2025-07-24 21:20:33] 2025-07-24 15:12:43,696 | INFO     | intersect: -8143110400.887082
[2025-07-24 21:20:33] 2025-07-24 15:12:43,697 | INFO     | chi2: 1.5024033594009947
[2025-07-24 21:20:33] 2025-07-24 15:12:43,697 | INFO     | current chi2=1.5024033594009947 (change=33.95025200288229 %)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,697 | INFO     | sum of square deviations: 9691828230.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,700 | INFO     | sum of deviations: 46211167747.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,701 | INFO     | mean x: 1753359654.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,701 | INFO     | mean y: 2497033.2412698413
[2025-07-24 21:20:33] 2025-07-24 15:12:43,701 | INFO     | -- intersect: -8357617814.957591
[2025-07-24 21:20:33] 2025-07-24 15:12:43,701 | INFO     | intersect: -8357617814.957591
[2025-07-24 21:20:33] 2025-07-24 15:12:43,702 | INFO     | chi2: 1.502821880954787
[2025-07-24 21:20:33] 2025-07-24 15:12:43,702 | INFO     | current chi2=1.502821880954787 (change=-0.027856803645544936 %)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,702 | INFO     | right removable region: 314
[2025-07-24 21:20:33] 2025-07-24 15:12:43,702 | INFO     | sum of square deviations: 10160711440.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,706 | INFO     | sum of deviations: -23117271626.000004
[2025-07-24 21:20:33] 2025-07-24 15:12:43,706 | INFO     | mean x: 1753360111.5
[2025-07-24 21:20:33] 2025-07-24 15:12:43,706 | INFO     | mean y: 2506437.4625
[2025-07-24 21:20:33] 2025-07-24 15:12:43,706 | INFO     | -- intersect: 3991685954.575049
[2025-07-24 21:20:33] 2025-07-24 15:12:43,706 | INFO     | intersect: 3991685954.575049
[2025-07-24 21:20:33] 2025-07-24 15:12:43,707 | INFO     | chi2: 0.8574085282718638
[2025-07-24 21:20:33] 2025-07-24 15:12:43,707 | INFO     | current chi2=0.8574085282718638 (change=62.30598336420448 %)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,708 | INFO     | sum of square deviations: 9691828230.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,711 | INFO     | sum of deviations: -15868761796.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,711 | INFO     | mean x: 1753360264.0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,711 | INFO     | mean y: 2504066.711111111
[2025-07-24 21:20:33] 2025-07-24 15:12:43,711 | INFO     | -- intersect: 2873340787.2652965
[2025-07-24 21:20:33] 2025-07-24 15:12:43,711 | INFO     | intersect: 2873340787.2652965
[2025-07-24 21:20:33] 2025-07-24 15:12:43,712 | INFO     | chi2: 0.830129609870396
[2025-07-24 21:20:33] 2025-07-24 15:12:43,712 | INFO     | current chi2=0.830129609870396 (change=3.1815543585097505 %)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,712 | INFO     | left removable region: 20
[2025-07-24 21:20:33] 2025-07-24 15:12:43,713 | INFO     | sum of square deviations: 7879803557.5
[2025-07-24 21:20:33] 2025-07-24 15:12:43,715 | INFO     | sum of deviations: 11187300722.500002
[2025-07-24 21:20:33] 2025-07-24 15:12:43,716 | INFO     | mean x: 1753360233.5
[2025-07-24 21:20:33] 2025-07-24 15:12:43,716 | INFO     | mean y: 2508411.4183673467
[2025-07-24 21:20:33] 2025-07-24 15:12:43,716 | INFO     | -- intersect: -2486813570.265733
[2025-07-24 21:20:33] 2025-07-24 15:12:43,716 | INFO     | intersect: -2486813570.265733
[2025-07-24 21:20:33] 2025-07-24 15:12:43,716 | INFO     | chi2: 0.0017401462200428977
[2025-07-24 21:20:33] 2025-07-24 15:12:43,717 | INFO     | -- intersect: -2486813570.265733
[2025-07-24 21:20:33] 2025-07-24 15:12:43,717 | INFO     | current memory leak: 1.42 B/s (using 294 data points, chi2=0.00)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | ..............................
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . Timing measurements:
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . get job = 0 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . initial setup = 2 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . payload setup = 12 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . stage-in = 0 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . payload execution = 19800 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . stage-out = 3 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | . log creation = 1 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,718 | INFO     | ..............................
[2025-07-24 21:20:33] 2025-07-24 15:12:43,846 | INFO     | 
[2025-07-24 21:20:33] 2025-07-24 15:12:43,846 | INFO     | job summary report
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | --------------------------------------------------
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | PanDA job id: 6743233057
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | task id: 45668900
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | errors: (none)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | pilot state: finished 
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | transexitcode: 0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | exeerrorcode: 0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | exeerrordiag: 
[2025-07-24 21:20:33] 2025-07-24 15:12:43,847 | INFO     | exitcode: 0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | exitmsg: OK
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | cpuconsumptiontime: 75687 s
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | nevents: 400
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | neventsw: 0
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | pid: 7915
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | pgrp: 7915
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | corecount: 8
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | event service: False
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | sizes: {0: 2396548, 1: 2397405, 2: 2397405, 13: 2397751, 23: 2397751, 19817: 2430285, 19818: 2430412, 19823: 2439531, 19919: 2439669}
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | --------------------------------------------------
[2025-07-24 21:20:33] 2025-07-24 15:12:43,848 | INFO     | 
[2025-07-24 21:20:33] 2025-07-24 15:12:43,849 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-07-24 21:20:33] 2025-07-24 15:12:43,882 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,882 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,882 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,882 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,883 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 21:20:33] 2025-07-24 15:12:43,884 | INFO     | job 6743233057 has completed (purged errors)
[2025-07-24 21:20:33] 2025-07-24 15:12:43,885 | INFO     | overall cleanup function is called
[2025-07-24 21:20:33] 2025-07-24 15:12:44,894 | INFO     | --- collectZombieJob: --- 10, [7915]
[2025-07-24 21:20:33] 2025-07-24 15:12:44,895 | INFO     | zombie collector waiting for pid 7915
[2025-07-24 21:20:33] 2025-07-24 15:12:44,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 21:20:33] 2025-07-24 15:12:44,895 | INFO     | collected zombie processes
[2025-07-24 21:20:33] 2025-07-24 15:12:44,895 | INFO     | will attempt to kill all subprocesses of pid=7915
[2025-07-24 21:20:33] 2025-07-24 15:12:44,989 | INFO     | process IDs to be killed: [7915] (in reverse order)
[2025-07-24 21:20:33] 2025-07-24 15:12:45,953 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 21:20:33] 2025-07-24 15:12:45,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 21:20:33] 2025-07-24 15:12:45,957 | INFO     | did not find any defunct processes belonging to 7915
[2025-07-24 21:20:33] 2025-07-24 15:12:45,960 | INFO     | did not find any defunct processes belonging to 7915
[2025-07-24 21:20:33] 2025-07-24 15:12:45,961 | INFO     | ready for new job
[2025-07-24 21:20:33] 2025-07-24 15:12:45,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 21:20:33] 2025-07-24 15:12:45,963 | INFO     | ***************************************
[2025-07-24 21:20:33] 2025-07-24 15:12:45,963 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 21:20:33] 2025-07-24 15:12:45,963 | INFO     | ***************************************
[2025-07-24 21:20:33] 2025-07-24 15:12:45,963 | INFO     | 
[2025-07-24 21:20:33] 2025-07-24 15:12:45,964 | INFO     | pilot is running in a VM
[2025-07-24 21:20:33] 2025-07-24 15:12:45,964 | INFO     | architecture information:
[2025-07-24 21:20:33] 2025-07-24 15:12:45,972 | INFO     | executing command: cat /etc/os-release
[2025-07-24 21:20:33] 2025-07-24 15:12:46,199 | INFO     | cat /etc/os-release:
[2025-07-24 21:20:33] NAME="CentOS Linux"
[2025-07-24 21:20:33] VERSION="7 (Core)"
[2025-07-24 21:20:33] ID="centos"
[2025-07-24 21:20:33] ID_LIKE="rhel fedora"
[2025-07-24 21:20:33] VERSION_ID="7"
[2025-07-24 21:20:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 21:20:33] ANSI_COLOR="0;31"
[2025-07-24 21:20:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 21:20:33] HOME_URL="https://www.centos.org/"
[2025-07-24 21:20:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 21:20:33] 
[2025-07-24 21:20:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 21:20:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 21:20:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 21:20:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 21:20:33] 
[2025-07-24 21:20:33] 2025-07-24 15:12:46,199 | INFO     | ***************************************
[2025-07-24 21:20:33] 2025-07-24 15:12:46,702 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-07-24 21:20:33] 2025-07-24 15:12:46,939 | INFO     | sufficient remaining disk space (496665362432 B)
[2025-07-24 21:20:33] 2025-07-24 15:12:46,939 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 21:20:33] 2025-07-24 15:12:46,939 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 21:20:33] 2025-07-24 15:12:46,940 | INFO     | update_server=False
[2025-07-24 21:20:33] 2025-07-24 15:12:46,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 21:20:33] 2025-07-24 15:12:46,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:20:33] 2025-07-24 15:12:46,943 | INFO     | aborting loop
[2025-07-24 21:20:33] 2025-07-24 15:12:47,440 | INFO     | all data control threads have been joined
[2025-07-24 21:20:33] 2025-07-24 15:12:47,523 | INFO     | all job control threads have been joined
[2025-07-24 21:20:33] 2025-07-24 15:12:47,945 | INFO     | [job] retrieve thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:47,948 | INFO     | [job] job monitor thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:47,968 | INFO     | [payload] validate_post thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:48,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 21:20:33] 2025-07-24 15:12:48,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 21:20:33] 2025-07-24 15:12:48,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:48,326 | INFO     | all payload control threads have been joined
[2025-07-24 21:20:33] 2025-07-24 15:12:48,383 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:48,432 | INFO     | [payload] failed_post thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:48,446 | INFO     | [data] control thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:48,529 | INFO     | [job] control thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:48,660 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:48,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 21:20:33] 2025-07-24 15:12:48,896 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:49,020 | INFO     | [data] copytool_in thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:49,331 | INFO     | [payload] control thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:49,363 | INFO     | [job] validate thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:49,871 | INFO     | [job] queue monitor thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:50,142 | INFO     | [data] copytool_out thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:52,301 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 21:20:33] 2025-07-24 15:12:53,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139770355853120)>', '<ExcThread(monitor, started 139770128758528)>']
[2025-07-24 21:20:33] 2025-07-24 15:12:58,940 | INFO     | all workflow threads have been joined
[2025-07-24 21:20:33] 2025-07-24 15:12:58,941 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 21:20:33] 2025-07-24 15:12:58,941 | INFO     | traces error code: 0
[2025-07-24 21:20:33] 2025-07-24 15:12:58,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 21:20:33] 2025-07-24 15:13:15,625 | INFO     | PID=1317 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-24 21:20:33] 2025-07-24 15:13:15,626 | INFO     | .. there are 9 such processes running
[2025-07-24 21:20:33] 2025-07-24 15:13:15,626 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 21:20:33] 2025-07-24 15:13:15,626 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 21:20:33] 2025-07-24 15:13:15,626 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 21:20:33] 2025-07-24 15:13:15,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 21:20:33] 2025-07-24 15:13:15,626 | CRITICAL | thread 'MainThread' is not alive
[2025-07-24 21:20:33] 2025-07-24 15:13:15,626 | INFO     | [monitor] control thread has ended
[2025-07-24 21:20:33] 2025-07-24 15:13:15,905 [wrapper] ==== pilot stdout END ====
[2025-07-24 21:20:33] 2025-07-24 15:13:15,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 21:20:33] 2025-07-24 15:13:15,964 [wrapper] pilotpid: 1317
[2025-07-24 21:20:33] 2025-07-24 15:13:15,990 [wrapper] Pilot exit status: 0
[2025-07-24 21:20:33] 2025-07-24 15:13:16,351 [wrapper] pandaids: 6743233057
[2025-07-24 21:20:33] 2025-07-24 15:13:17,221 [wrapper] cleanup supervisor_pilot 24241 1318
[2025-07-24 21:20:33] 2025-07-24 15:13:17,344 [wrapper] Test setup, not cleaning
[2025-07-24 21:20:33] 2025-07-24 15:13:17,445 [wrapper] apfmon messages muted
[2025-07-24 21:20:33] 2025-07-24 15:13:17,553 [wrapper] ==== wrapper stdout END ====
[2025-07-24 21:20:33] 2025-07-24 15:13:17,646 [wrapper] ==== wrapper stderr END ====
[2025-07-24 21:20:33]  *** Error codes and diagnostics ***
[2025-07-24 21:20:33]     "exeErrorCode": 0,
[2025-07-24 21:20:33]     "exeErrorDiag": "",
[2025-07-24 21:20:33]     "pilotErrorCode": 0,
[2025-07-24 21:20:33]     "pilotErrorDiag": "",
[2025-07-24 21:20:33]  *** Listing of results directory ***
[2025-07-24 21:20:34] total 472020
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc    530466 Jul 23 18:45 pilot3.tar.gz
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc      5112 Jul 23 18:55 queuedata.json
[2025-07-24 21:20:34] -rwx------. 1 boinc boinc     36292 Jul 23 18:57 runpilot2-wrapper.sh
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc       100 Jul 24 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 21:20:34] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 11:37 run_atlas
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc       105 Jul 24 11:37 job.xml
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc      6391 Jul 24 11:37 init_data.xml
[2025-07-24 21:20:34] -rw-r--r--. 2 boinc boinc 282946528 Jul 24 11:37 EVNT.45668898._000014.pool.root.1
[2025-07-24 21:20:34] -rw-r--r--. 2 boinc boinc     15095 Jul 24 11:37 start_atlas.sh
[2025-07-24 21:20:34] drwxrwx--x. 2 boinc boinc        68 Jul 24 11:37 shared
[2025-07-24 21:20:34] -rw-r--r--. 2 boinc boinc    542877 Jul 24 11:37 input.tar.gz
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc         0 Jul 24 11:37 boinc_lockfile
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc      2535 Jul 24 11:37 pandaJob.out
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc    978947 Jul 24 11:40 agis_schedconf.cvmfs.json
[2025-07-24 21:20:34] drwx------. 4 boinc boinc      4096 Jul 24 11:40 pilot3
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc 192199321 Jul 24 17:09 HITS.45668900._000357.pool.root.1
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc       531 Jul 24 17:10 boinc_task_state.xml
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc      1017 Jul 24 17:10 memory_monitor_summary.json
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc   1593048 Jul 24 17:11 agis_ddmendpoints.agis.ALL.json
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc    453751 Jul 24 17:11 log.45668900._000357.job.log.tgz.1
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc        95 Jul 24 17:12 pilot_heartbeat.json
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc      7767 Jul 24 17:12 heartbeat.json
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc       889 Jul 24 17:13 pilotlog.txt
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc   1719235 Jul 24 17:13 log.45668900._000357.job.log.1
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc       357 Jul 24 17:13 output.list
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc       620 Jul 24 17:13 runtime_log
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc   2191360 Jul 24 17:13 result.tar.gz
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc       658 Jul 24 17:13 RxGMDmMxry7n9Rq4apOajLDm4fhM0noT9bVof3QYDmJWwKDmpOgefn.diag
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc      8674 Jul 24 17:13 runtime_log.err
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc      8192 Jul 24 21:20 boinc_mmap_file
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc        28 Jul 24 21:20 wrapper_checkpoint.txt
[2025-07-24 21:20:34] -rw-r--r--. 1 boinc boinc     20565 Jul 24 21:20 stderr.txt
[2025-07-24 21:20:34] HITS file was successfully produced:
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc 192199321 Jul 24 17:09 shared/HITS.pool.root.1
[2025-07-24 21:20:34]  *** Contents of shared directory: ***
[2025-07-24 21:20:34] total 466700
[2025-07-24 21:20:34] -rw-r--r--. 2 boinc boinc 282946528 Jul 24 11:37 ATLAS.root_0
[2025-07-24 21:20:34] -rw-r--r--. 2 boinc boinc     15095 Jul 24 11:37 start_atlas.sh
[2025-07-24 21:20:34] -rw-r--r--. 2 boinc boinc    542877 Jul 24 11:37 input.tar.gz
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc 192199321 Jul 24 17:09 HITS.pool.root.1
[2025-07-24 21:20:34] -rw-------. 1 boinc boinc   2191360 Jul 24 17:13 result.tar.gz
21:20:35 (29702): run_atlas exited; CPU time 75953.165720
21:20:35 (29702): called boinc_finish(0)

</stderr_txt>
]]>

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