Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:26:29 (1941464): wrapper (7.7.26015): starting
19:26:29 (1941464): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 19:26:29] Arguments: --nthreads 8
[2025-07-23 19:26:29] Threads: 8
[2025-07-23 19:26:29] Checking for CVMFS
[2025-07-23 19:26:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 19:26:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 19:26:29] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 19:26:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 19:26:30] 2.13.1.0 645510 9082 240868 148675 3 446 22065701 40960001 22684 16776704 0 21700036 99.647 31867308 39170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 19:26:30] CVMFS is ok
[2025-07-23 19:26:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 19:26:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 19:26:30] Further information can be found at the LHC@home message board.
[2025-07-23 19:26:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 19:26:30] Checking for apptainer binary...
[2025-07-23 19:26:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 19:26:30] Running /usr/bin/apptainer --version
[2025-07-23 19:26:30] apptainer version 1.4.1-1.el9
[2025-07-23 19:26:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 19:26:30] c-212-5.aglt2.org
[2025-07-23 19:26:30] apptainer works
[2025-07-23 19:26:30] Set ATHENA_PROC_NUMBER=8
[2025-07-23 19:26:30] Set ATHENA_CORE_NUMBER=8
[2025-07-23 19:26:30] Starting ATLAS job with PandaID=6743232139
[2025-07-23 19:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 22:38:45]  *** The last 200 lines of the pilot log: ***
[2025-07-23 22:38:45] 2025-07-24 02:38:09,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,758 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 22:38:45] 2025-07-24 02:38:11,764 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3022.604135416666
[2025-07-23 22:38:45] 2025-07-24 02:38:11,778 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743232139/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,779 | INFO     | extracted standard info from prmon json
[2025-07-23 22:38:45] 2025-07-24 02:38:11,779 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 22:38:45] 2025-07-24 02:38:11,779 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 22:38:45] 2025-07-24 02:38:11,780 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 22:38:45] 2025-07-24 02:38:11,780 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 22:38:45] 2025-07-24 02:38:11,782 | INFO     | fitting pss+swap vs Time
[2025-07-23 22:38:45] 2025-07-24 02:38:11,783 | INFO     | sum of square deviations: 2060338440.9946816
[2025-07-23 22:38:45] 2025-07-24 02:38:11,784 | INFO     | sum of deviations: -19182605336.499996
[2025-07-23 22:38:45] 2025-07-24 02:38:11,784 | INFO     | mean x: 1753318934.505319
[2025-07-23 22:38:45] 2025-07-24 02:38:11,784 | INFO     | mean y: 2588658.5
[2025-07-23 22:38:45] 2025-07-24 02:38:11,784 | INFO     | -- intersect: 16326715064.349573
[2025-07-23 22:38:45] 2025-07-24 02:38:11,784 | INFO     | intersect: 16326715064.349573
[2025-07-23 22:38:45] 2025-07-24 02:38:11,784 | INFO     | chi2: 1.3926071767344863
[2025-07-23 22:38:45] 2025-07-24 02:38:11,784 | INFO     | sum of square deviations: 1900279930.9945261
[2025-07-23 22:38:45] 2025-07-24 02:38:11,785 | INFO     | sum of deviations: -19044883571.923492
[2025-07-23 22:38:45] 2025-07-24 02:38:11,785 | INFO     | mean x: 1753318782.0054646
[2025-07-23 22:38:45] 2025-07-24 02:38:11,785 | INFO     | mean y: 2588789.9234972675
[2025-07-23 22:38:45] 2025-07-24 02:38:11,786 | INFO     | -- intersect: 17574606219.105602
[2025-07-23 22:38:45] 2025-07-24 02:38:11,786 | INFO     | intersect: 17574606219.105602
[2025-07-23 22:38:45] 2025-07-24 02:38:11,786 | INFO     | chi2: 1.388183722448849
[2025-07-23 22:38:45] 2025-07-24 02:38:11,786 | INFO     | current chi2=1.388183722448849 (change=0.31763833761146626 %)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,786 | INFO     | right removable region: 182
[2025-07-23 22:38:45] 2025-07-24 02:38:11,786 | INFO     | sum of square deviations: 1900279320.9945261
[2025-07-23 22:38:45] 2025-07-24 02:38:11,787 | INFO     | sum of deviations: -41165924343.50831
[2025-07-23 22:38:45] 2025-07-24 02:38:11,787 | INFO     | mean x: 1753319087.0054646
[2025-07-23 22:38:45] 2025-07-24 02:38:11,787 | INFO     | mean y: 2609264.5081967213
[2025-07-23 22:38:45] 2025-07-24 02:38:11,787 | INFO     | -- intersect: 37984920648.03764
[2025-07-23 22:38:45] 2025-07-24 02:38:11,787 | INFO     | intersect: 37984920648.03764
[2025-07-23 22:38:45] 2025-07-24 02:38:11,788 | INFO     | chi2: 0.20414952491750327
[2025-07-23 22:38:45] 2025-07-24 02:38:11,788 | INFO     | current chi2=0.20414952491750327 (change=85.34048019225266 %)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,788 | INFO     | sum of square deviations: 1748731988.4943824
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | sum of deviations: -33544629397.32585
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | mean x: 1753319239.505618
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | mean y: 2601583.8258426967
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | -- intersect: 33635224816.763344
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | intersect: 33635224816.763344
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | chi2: 0.18554535859783558
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | current chi2=0.18554535859783558 (change=9.113009852550782 %)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,789 | INFO     | left removable region: 20
[2025-07-23 22:38:45] 2025-07-24 02:38:11,790 | INFO     | sum of square deviations: 1318271580.493832
[2025-07-23 22:38:45] 2025-07-24 02:38:11,790 | INFO     | sum of deviations: -16145715926.259243
[2025-07-23 22:38:45] 2025-07-24 02:38:11,790 | INFO     | mean x: 1753319361.506173
[2025-07-23 22:38:45] 2025-07-24 02:38:11,790 | INFO     | mean y: 2582387.7592592593
[2025-07-23 22:38:45] 2025-07-24 02:38:11,791 | INFO     | -- intersect: 21476606980.08517
[2025-07-23 22:38:45] 2025-07-24 02:38:11,791 | INFO     | intersect: 21476606980.08517
[2025-07-23 22:38:45] 2025-07-24 02:38:11,791 | INFO     | chi2: 0.09455674425152921
[2025-07-23 22:38:45] 2025-07-24 02:38:11,791 | INFO     | -- intersect: 21476606980.08517
[2025-07-23 22:38:45] 2025-07-24 02:38:11,791 | INFO     | current memory leak: -12.25 B/s (using 162 data points, chi2=0.09)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,791 | INFO     | could have reported an average CPU frequency of 2934 MHz (10 samples)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | ..............................
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . Timing measurements:
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . get job = 0 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . initial setup = 2 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . payload setup = 7 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . stage-in = 0 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . payload execution = 11450 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . stage-out = 1 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | . log creation = 0 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,792 | INFO     | ..............................
[2025-07-23 22:38:45] 2025-07-24 02:38:11,869 | INFO     | 
[2025-07-23 22:38:45] 2025-07-24 02:38:11,869 | INFO     | job summary report
[2025-07-23 22:38:45] 2025-07-24 02:38:11,869 | INFO     | --------------------------------------------------
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | PanDA job id: 6743232139
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | task id: 45668889
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | errors: (none)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | pilot state: finished 
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | transexitcode: 0
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | exeerrorcode: 0
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | exeerrordiag: 
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | exitcode: 0
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | exitmsg: OK
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | cpuconsumptiontime: 50545 s
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | nevents: 400
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | neventsw: 0
[2025-07-23 22:38:45] 2025-07-24 02:38:11,870 | INFO     | pid: 1951784
[2025-07-23 22:38:45] 2025-07-24 02:38:11,871 | INFO     | pgrp: 1951784
[2025-07-23 22:38:45] 2025-07-24 02:38:11,871 | INFO     | corecount: 8
[2025-07-23 22:38:45] 2025-07-24 02:38:11,871 | INFO     | event service: False
[2025-07-23 22:38:45] 2025-07-24 02:38:11,871 | INFO     | sizes: {0: 2397419, 5: 2397681, 11: 2397737, 11462: 2427076, 11464: 2436074, 11467: 2436130, 11474: 2436452}
[2025-07-23 22:38:45] 2025-07-24 02:38:11,871 | INFO     | --------------------------------------------------
[2025-07-23 22:38:45] 2025-07-24 02:38:11,871 | INFO     | 
[2025-07-23 22:38:45] 2025-07-24 02:38:11,871 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 22:38:45] 2025-07-24 02:38:11,893 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | job 6743232139 has completed (purged errors)
[2025-07-23 22:38:45] 2025-07-24 02:38:11,895 | INFO     | overall cleanup function is called
[2025-07-23 22:38:45] 2025-07-24 02:38:12,904 | INFO     | --- collectZombieJob: --- 10, [1951784]
[2025-07-23 22:38:45] 2025-07-24 02:38:12,904 | INFO     | zombie collector waiting for pid 1951784
[2025-07-23 22:38:45] 2025-07-24 02:38:12,904 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 22:38:45] 2025-07-24 02:38:12,905 | INFO     | collected zombie processes
[2025-07-23 22:38:45] 2025-07-24 02:38:12,905 | INFO     | will attempt to kill all subprocesses of pid=1951784
[2025-07-23 22:38:45] 2025-07-24 02:38:13,297 | INFO     | process IDs to be killed: [1951784] (in reverse order)
[2025-07-23 22:38:45] 2025-07-24 02:38:13,431 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 22:38:45] 2025-07-24 02:38:13,432 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 22:38:45] 2025-07-24 02:38:13,449 | INFO     | did not find any defunct processes belonging to 1951784
[2025-07-23 22:38:45] 2025-07-24 02:38:13,468 | INFO     | did not find any defunct processes belonging to 1951784
[2025-07-23 22:38:45] 2025-07-24 02:38:13,468 | INFO     | ready for new job
[2025-07-23 22:38:45] 2025-07-24 02:38:13,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 22:38:45] 2025-07-24 02:38:13,471 | INFO     | ***************************************
[2025-07-23 22:38:45] 2025-07-24 02:38:13,471 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 22:38:45] 2025-07-24 02:38:13,472 | INFO     | ***************************************
[2025-07-23 22:38:45] 2025-07-24 02:38:13,472 | INFO     | 
[2025-07-23 22:38:45] 2025-07-24 02:38:13,478 | INFO     | architecture information:
[2025-07-23 22:38:45] 2025-07-24 02:38:13,479 | INFO     | executing command: cat /etc/os-release
[2025-07-23 22:38:45] 2025-07-24 02:38:13,498 | INFO     | cat /etc/os-release:
[2025-07-23 22:38:45] NAME="CentOS Linux"
[2025-07-23 22:38:45] VERSION="7 (Core)"
[2025-07-23 22:38:45] ID="centos"
[2025-07-23 22:38:45] ID_LIKE="rhel fedora"
[2025-07-23 22:38:45] VERSION_ID="7"
[2025-07-23 22:38:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 22:38:45] ANSI_COLOR="0;31"
[2025-07-23 22:38:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 22:38:45] HOME_URL="https://www.centos.org/"
[2025-07-23 22:38:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 22:38:45] 
[2025-07-23 22:38:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 22:38:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 22:38:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 22:38:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 22:38:45] 
[2025-07-23 22:38:45] 2025-07-24 02:38:13,498 | INFO     | ***************************************
[2025-07-23 22:38:45] 2025-07-24 02:38:14,001 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 22:38:45] 2025-07-24 02:38:14,021 | INFO     | sufficient remaining disk space (129654325248 B)
[2025-07-23 22:38:45] 2025-07-24 02:38:14,021 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 22:38:45] 2025-07-24 02:38:14,022 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 22:38:45] 2025-07-24 02:38:14,022 | INFO     | update_server=False
[2025-07-23 22:38:45] 2025-07-24 02:38:14,022 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 22:38:45] 2025-07-24 02:38:14,194 | INFO     | all data control threads have been joined
[2025-07-23 22:38:45] 2025-07-24 02:38:14,511 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 22:38:45] 2025-07-24 02:38:14,511 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 22:38:45] 2025-07-24 02:38:14,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 22:38:45] 2025-07-24 02:38:14,511 | INFO     | will abort loop
[2025-07-23 22:38:45] 2025-07-24 02:38:15,027 | INFO     | [job] retrieve thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:15,075 | INFO     | [job] validate thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:15,199 | INFO     | [data] control thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:15,359 | INFO     | all job control threads have been joined
[2025-07-23 22:38:45] 2025-07-24 02:38:15,361 | INFO     | all payload control threads have been joined
[2025-07-23 22:38:45] 2025-07-24 02:38:15,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 22:38:45] 2025-07-24 02:38:15,516 | INFO     | [job] job monitor thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:15,587 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:15,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 22:38:45] 2025-07-24 02:38:15,754 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:15,820 | INFO     | [payload] validate_post thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:16,101 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:16,365 | INFO     | [job] control thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:16,367 | INFO     | [payload] control thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:16,390 | INFO     | [data] copytool_in thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:16,412 | INFO     | [payload] failed_post thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:16,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 22:38:45] 2025-07-24 02:38:17,441 | INFO     | [data] copytool_out thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:17,886 | INFO     | [job] queue monitor thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:19,609 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:24,513 | INFO     | job.realtimelogging is not enabled
[2025-07-23 22:38:45] 2025-07-24 02:38:25,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 22:38:45] 2025-07-24 02:38:25,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139916975630144)>', '<ExcThread(monitor, started 139916702881536)>']
[2025-07-23 22:38:45] 2025-07-24 02:38:30,582 | INFO     | all workflow threads have been joined
[2025-07-23 22:38:45] 2025-07-24 02:38:30,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 22:38:45] 2025-07-24 02:38:30,583 | INFO     | traces error code: 0
[2025-07-23 22:38:45] 2025-07-24 02:38:30,583 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 22:38:45] 2025-07-24 02:38:45,337 | INFO     | PID=1945040 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 22:38:45] 2025-07-24 02:38:45,338 | INFO     | .. there are 19 such processes running
[2025-07-23 22:38:45] 2025-07-24 02:38:45,338 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 22:38:45] 2025-07-24 02:38:45,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 22:38:45] 2025-07-24 02:38:45,338 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 22:38:45] 2025-07-24 02:38:45,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 22:38:45] 2025-07-24 02:38:45,338 | INFO     | [monitor] control thread has ended
[2025-07-23 22:38:45] 2025-07-24 02:38:45,520 [wrapper] ==== pilot stdout END ====
[2025-07-23 22:38:45] 2025-07-24 02:38:45,525 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 22:38:45] 2025-07-24 02:38:45,529 [wrapper] pilotpid: 1945040
[2025-07-23 22:38:45] 2025-07-24 02:38:45,532 [wrapper] Pilot exit status: 0
[2025-07-23 22:38:45] 2025-07-24 02:38:45,545 [wrapper] pandaids: 6743232139
[2025-07-23 22:38:45] 2025-07-24 02:38:45,638 [wrapper] cleanup supervisor_pilot 2493782 1945041
[2025-07-23 22:38:45] 2025-07-24 02:38:45,641 [wrapper] Test setup, not cleaning
[2025-07-23 22:38:45] 2025-07-24 02:38:45,644 [wrapper] apfmon messages muted
[2025-07-23 22:38:45] 2025-07-24 02:38:45,648 [wrapper] ==== wrapper stdout END ====
[2025-07-23 22:38:45] 2025-07-24 02:38:45,650 [wrapper] ==== wrapper stderr END ====
[2025-07-23 22:38:45]  *** Error codes and diagnostics ***
[2025-07-23 22:38:45]     "exeErrorCode": 0,
[2025-07-23 22:38:45]     "exeErrorDiag": "",
[2025-07-23 22:38:45]     "pilotErrorCode": 0,
[2025-07-23 22:38:45]     "pilotErrorDiag": "",
[2025-07-23 22:38:45]  *** Listing of results directory ***
[2025-07-23 22:38:45] total 524584
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 12:27 pilot3.tar.gz
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 12:32 queuedata.json
[2025-07-23 22:38:45] -rwx------. 1 boincer umatlas     36292 Jul 23 12:33 runpilot2-wrapper.sh
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas       100 Jul 23 19:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 22:38:45] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 19:26 run_atlas
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas       105 Jul 23 19:26 job.xml
[2025-07-23 22:38:45] -rw-r--r--. 2 boincer umatlas 305095210 Jul 23 19:26 EVNT.45668886._000035.pool.root.1
[2025-07-23 22:38:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 19:26 start_atlas.sh
[2025-07-23 22:38:45] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 19:26 shared
[2025-07-23 22:38:45] -rw-r--r--. 2 boincer umatlas    542880 Jul 23 19:26 input.tar.gz
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas         0 Jul 23 19:26 boinc_lockfile
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas      2538 Jul 23 19:26 pandaJob.out
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas    979640 Jul 23 19:26 agis_schedconf.cvmfs.json
[2025-07-23 22:38:45] drwx------. 4 boincer umatlas      4096 Jul 23 19:26 pilot3
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas      6941 Jul 23 22:36 init_data.xml
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas       530 Jul 23 22:37 boinc_task_state.xml
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas 225408753 Jul 23 22:37 HITS.45668889._000908.pool.root.1
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas      1050 Jul 23 22:37 memory_monitor_summary.json
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas   1593041 Jul 23 22:38 agis_ddmendpoints.agis.ALL.json
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas    365712 Jul 23 22:38 log.45668889._000908.job.log.tgz.1
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas        95 Jul 23 22:38 pilot_heartbeat.json
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas      7776 Jul 23 22:38 heartbeat.json
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 22:38 boinc_mmap_file
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas        28 Jul 23 22:38 wrapper_checkpoint.txt
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas       823 Jul 23 22:38 pilotlog.txt
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas   1031640 Jul 23 22:38 log.45668889._000908.job.log.1
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas       357 Jul 23 22:38 output.list
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas       620 Jul 23 22:38 runtime_log
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas   1413120 Jul 23 22:38 result.tar.gz
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas      8656 Jul 23 22:38 runtime_log.err
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas       655 Jul 23 22:38 5kYMDmWary7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm5uLLDmT7IKjn.diag
[2025-07-23 22:38:45] -rw-r--r--. 1 boincer umatlas     21185 Jul 23 22:38 stderr.txt
[2025-07-23 22:38:45] HITS file was successfully produced:
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas 225408753 Jul 23 22:37 shared/HITS.pool.root.1
[2025-07-23 22:38:45]  *** Contents of shared directory: ***
[2025-07-23 22:38:45] total 520012
[2025-07-23 22:38:45] -rw-r--r--. 2 boincer umatlas 305095210 Jul 23 19:26 ATLAS.root_0
[2025-07-23 22:38:45] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 19:26 start_atlas.sh
[2025-07-23 22:38:45] -rw-r--r--. 2 boincer umatlas    542880 Jul 23 19:26 input.tar.gz
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas 225408753 Jul 23 22:37 HITS.pool.root.1
[2025-07-23 22:38:45] -rw-------. 1 boincer umatlas   1413120 Jul 23 22:38 result.tar.gz
22:39:07 (1941464): run_atlas exited; CPU time 50894.388202
22:39:07 (1941464): called boinc_finish(0)

</stderr_txt>
]]>

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