Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:38:00 (896229): wrapper (7.7.26015): starting
19:38:00 (896229): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 19:38:00] Arguments: --nthreads 8
[2025-07-23 19:38:00] Threads: 8
[2025-07-23 19:38:00] Checking for CVMFS
[2025-07-23 19:38:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 19:38:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 19:38:00] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 19:38:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 19:38:00] 2.13.1.0 665382 3081 77212 148675 1 188 33300476 40960000 13013 16776704 0 43252021 99.998 112606 55064 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 19:38:00] CVMFS is ok
[2025-07-23 19:38:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 19:38:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 19:38:00] Further information can be found at the LHC@home message board.
[2025-07-23 19:38:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 19:38:00] Checking for apptainer binary...
[2025-07-23 19:38:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 19:38:00] Running /usr/bin/apptainer --version
[2025-07-23 19:38:00] apptainer version 1.4.1-1.el9
[2025-07-23 19:38:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 19:38:00] c-208-40.aglt2.org
[2025-07-23 19:38:00] apptainer works
[2025-07-23 19:38:00] Set ATHENA_PROC_NUMBER=8
[2025-07-23 19:38:00] Set ATHENA_CORE_NUMBER=8
[2025-07-23 19:38:00] Starting ATLAS job with PandaID=6743232417
[2025-07-23 19:38:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 20:49:19]  *** The last 200 lines of the pilot log: ***
[2025-07-23 20:49:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 20:49:19]  replicas=None
[2025-07-23 20:49:19]  scope=mc23_13p6TeV
[2025-07-23 20:49:19]  status=None
[2025-07-23 20:49:19]  status_code=0
[2025-07-23 20:49:19]  storage_token=
[2025-07-23 20:49:19]  surl=/tmp/boinchome/slots/15/PanDA_Pilot-6743232417/log.45668889._001079.job.log.tgz.1
[2025-07-23 20:49:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/c3/log.45668889._001079.job.log.tgz.1
[2025-07-23 20:49:19]  workdir=None
[2025-07-23 20:49:19] ]
[2025-07-23 20:49:19] 2025-07-24 00:48:30,312 | INFO     | transferring file log.45668889._001079.job.log.tgz.1 from /tmp/boinchome/slots/15/PanDA_Pilot-6743232417/log.45668889._001079.job.log.tgz.1 to /tmp/boinchome/slots
[2025-07-23 20:49:19] 2025-07-24 00:48:30,312 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/15/PanDA_Pilot-6743232417/log.45668889._001079.job.log.tgz.1 /tmp/boinchome/slots/15/log.45668889._001079.j
[2025-07-23 20:49:19] 2025-07-24 00:48:30,329 | INFO     | adding to output.list: log.45668889._001079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/c3/log.45668889._001079.job.log.tg
[2025-07-23 20:49:19] 2025-07-24 00:48:30,330 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 20:49:19] 2025-07-24 00:48:30,330 | INFO     | summary of transferred files:
[2025-07-23 20:49:19] 2025-07-24 00:48:30,330 | INFO     |  -- lfn=log.45668889._001079.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 20:49:19] 2025-07-24 00:48:30,330 | INFO     | stage-out finished correctly
[2025-07-23 20:49:19] 2025-07-24 00:48:30,628 | WARNING  | process 909100 can no longer be monitored (due to stat problems) - aborting
[2025-07-23 20:49:19] 2025-07-24 00:48:30,629 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6743232417/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 20:49:19] 2025-07-24 00:48:30,973 | INFO     | number of running child processes to parent process 909100: 1
[2025-07-23 20:49:19] 2025-07-24 00:48:30,973 | INFO     | maximum number of monitored processes: 6
[2025-07-23 20:49:19] 2025-07-24 00:48:33,151 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 20:49:19] 2025-07-24 00:48:33,476 | INFO     | monitor loop #305: job 0:6743232417 is in state 'finished'
[2025-07-23 20:49:19] 2025-07-24 00:48:33,477 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 20:49:19] 2025-07-24 00:48:35,701 | INFO     | job 6743232417 has state=finished
[2025-07-23 20:49:19] 2025-07-24 00:48:35,701 | INFO     | preparing for final server update for job 6743232417 in state='finished'
[2025-07-23 20:49:19] 2025-07-24 00:48:35,702 | INFO     | this job has now completed (state=finished)
[2025-07-23 20:49:19] 2025-07-24 00:48:35,702 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 20:49:19] 2025-07-24 00:48:35,702 | INFO     | log transfer has been attempted: DONE
[2025-07-23 20:49:19] 2025-07-24 00:48:35,702 | INFO     | job 6743232417 has finished - writing final server update
[2025-07-23 20:49:19] 2025-07-24 00:48:35,702 | INFO     | total number of processed events: 400 (read)
[2025-07-23 20:49:19] 2025-07-24 00:48:35,704 | INFO     | executing command: lscpu
[2025-07-23 20:49:19] 2025-07-24 00:48:35,756 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 20:49:19] 2025-07-24 00:48:35,979 | INFO     | monitor loop #306: job 0:6743232417 is in state 'finished'
[2025-07-23 20:49:19] 2025-07-24 00:48:35,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 20:49:19] 2025-07-24 00:48:38,482 | INFO     | monitor loop #307: job 0:6743232417 is in state 'finished'
[2025-07-23 20:49:19] 2025-07-24 00:48:38,482 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 20:49:19] 2025-07-24 00:48:38,974 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 20:49:19] 2025-07-24 00:48:38,979 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3739.5706171875
[2025-07-23 20:49:19] 2025-07-24 00:48:38,991 | INFO     | using path: /tmp/boinchome/slots/15/PanDA_Pilot-6743232417/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 20:49:19] 2025-07-24 00:48:38,992 | INFO     | extracted standard info from prmon json
[2025-07-23 20:49:19] 2025-07-24 00:48:38,992 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 20:49:19] 2025-07-24 00:48:38,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 20:49:19] 2025-07-24 00:48:38,992 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 20:49:19] 2025-07-24 00:48:38,992 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 20:49:19] 2025-07-24 00:48:38,993 | INFO     | fitting pss+swap vs Time
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | sum of square deviations: 73882315.5
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | sum of deviations: -475215711.50000006
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | mean x: 1753316078.5
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | mean y: 2549490.564516129
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | -- intersect: 11279989052.251879
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | intersect: 11279989052.251879
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | chi2: 0.002352677262180646
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | -- intersect: 11279989052.251879
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | current memory leak: -6.43 B/s (using 62 data points, chi2=0.00)
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | could have reported an average CPU frequency of 3756 MHz (6 samples)
[2025-07-23 20:49:19] 2025-07-24 00:48:38,994 | INFO     | ..............................
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . Timing measurements:
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . get job = 0 s
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . initial setup = 2 s
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . payload setup = 4 s
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . stage-in = 0 s
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . payload execution = 4196 s
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . stage-out = 0 s
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | . log creation = 0 s
[2025-07-23 20:49:19] 2025-07-24 00:48:38,995 | INFO     | ..............................
[2025-07-23 20:49:19] 2025-07-24 00:48:39,050 | INFO     | 
[2025-07-23 20:49:19] 2025-07-24 00:48:39,050 | INFO     | job summary report
[2025-07-23 20:49:19] 2025-07-24 00:48:39,050 | INFO     | --------------------------------------------------
[2025-07-23 20:49:19] 2025-07-24 00:48:39,050 | INFO     | PanDA job id: 6743232417
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | task id: 45668889
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | errors: (none)
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | pilot state: finished 
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | transexitcode: 0
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | exeerrorcode: 0
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | exeerrordiag: 
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | exitcode: 0
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | exitmsg: OK
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | cpuconsumptiontime: 31245 s
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | nevents: 400
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | neventsw: 0
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | pid: 909100
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | pgrp: 909100
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | corecount: 8
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | event service: False
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | sizes: {0: 2397424, 3: 2397686, 11: 2397714, 4205: 2423743, 4206: 2432743, 4209: 2432799, 4215: 2433121}
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | --------------------------------------------------
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | 
[2025-07-23 20:49:19] 2025-07-24 00:48:39,051 | INFO     | executing command: ls -lF /tmp/boinchome/slots/15
[2025-07-23 20:49:19] 2025-07-24 00:48:39,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | job 6743232417 has completed (purged errors)
[2025-07-23 20:49:19] 2025-07-24 00:48:39,071 | INFO     | overall cleanup function is called
[2025-07-23 20:49:19] 2025-07-24 00:48:40,079 | INFO     | --- collectZombieJob: --- 10, [909100]
[2025-07-23 20:49:19] 2025-07-24 00:48:40,079 | INFO     | zombie collector waiting for pid 909100
[2025-07-23 20:49:19] 2025-07-24 00:48:40,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 20:49:19] 2025-07-24 00:48:40,079 | INFO     | collected zombie processes
[2025-07-23 20:49:19] 2025-07-24 00:48:40,079 | INFO     | will attempt to kill all subprocesses of pid=909100
[2025-07-23 20:49:19] 2025-07-24 00:48:40,420 | INFO     | process IDs to be killed: [909100] (in reverse order)
[2025-07-23 20:49:19] 2025-07-24 00:48:40,532 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 20:49:19] 2025-07-24 00:48:40,533 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 20:49:19] 2025-07-24 00:48:40,548 | INFO     | did not find any defunct processes belonging to 909100
[2025-07-23 20:49:19] 2025-07-24 00:48:40,561 | INFO     | did not find any defunct processes belonging to 909100
[2025-07-23 20:49:19] 2025-07-24 00:48:40,561 | INFO     | ready for new job
[2025-07-23 20:49:19] 2025-07-24 00:48:40,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 20:49:19] 2025-07-24 00:48:40,562 | INFO     | ***************************************
[2025-07-23 20:49:19] 2025-07-24 00:48:40,563 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 20:49:19] 2025-07-24 00:48:40,563 | INFO     | ***************************************
[2025-07-23 20:49:19] 2025-07-24 00:48:40,563 | INFO     | 
[2025-07-23 20:49:19] 2025-07-24 00:48:40,567 | INFO     | architecture information:
[2025-07-23 20:49:19] 2025-07-24 00:48:40,567 | INFO     | executing command: cat /etc/os-release
[2025-07-23 20:49:19] 2025-07-24 00:48:40,579 | INFO     | cat /etc/os-release:
[2025-07-23 20:49:19] NAME="CentOS Linux"
[2025-07-23 20:49:19] VERSION="7 (Core)"
[2025-07-23 20:49:19] ID="centos"
[2025-07-23 20:49:19] ID_LIKE="rhel fedora"
[2025-07-23 20:49:19] VERSION_ID="7"
[2025-07-23 20:49:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 20:49:19] ANSI_COLOR="0;31"
[2025-07-23 20:49:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 20:49:19] HOME_URL="https://www.centos.org/"
[2025-07-23 20:49:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 20:49:19] 
[2025-07-23 20:49:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 20:49:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 20:49:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 20:49:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 20:49:19] 
[2025-07-23 20:49:19] 2025-07-24 00:48:40,580 | INFO     | ***************************************
[2025-07-23 20:49:19] 2025-07-24 00:48:41,083 | INFO     | executing command: df -mP /tmp/boinchome/slots/15
[2025-07-23 20:49:19] 2025-07-24 00:48:41,097 | INFO     | sufficient remaining disk space (161697759232 B)
[2025-07-23 20:49:19] 2025-07-24 00:48:41,097 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 20:49:19] 2025-07-24 00:48:41,097 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 20:49:19] 2025-07-24 00:48:41,097 | INFO     | update_server=False
[2025-07-23 20:49:19] 2025-07-24 00:48:41,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 20:49:19] 2025-07-24 00:48:41,098 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 20:49:19] 2025-07-24 00:48:41,529 | INFO     | all job control threads have been joined
[2025-07-23 20:49:19] 2025-07-24 00:48:41,859 | INFO     | all data control threads have been joined
[2025-07-23 20:49:19] 2025-07-24 00:48:41,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 20:49:19] 2025-07-24 00:48:41,990 | INFO     | aborting loop
[2025-07-23 20:49:19] 2025-07-24 00:48:42,102 | INFO     | [job] retrieve thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,474 | INFO     | all payload control threads have been joined
[2025-07-23 20:49:19] 2025-07-24 00:48:42,501 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,535 | INFO     | [job] control thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,647 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,650 | INFO     | [job] validate thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,723 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,804 | INFO     | [payload] validate_post thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,862 | INFO     | [data] control thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,956 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:42,995 | INFO     | [job] job monitor thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:43,100 | INFO     | [data] copytool_out thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:43,224 | INFO     | [data] copytool_in thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:43,480 | INFO     | [payload] control thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:43,673 | INFO     | [payload] failed_post thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:43,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 20:49:19] 2025-07-24 00:48:44,061 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 20:49:19] 2025-07-24 00:48:45,067 | INFO     | [job] queue monitor thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:47,716 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 20:49:19] 2025-07-24 00:48:48,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632001763136)>', '<ExcThread(monitor, started 139631509096192)>']
[2025-07-23 20:49:19] 2025-07-24 00:48:54,004 | INFO     | all workflow threads have been joined
[2025-07-23 20:49:19] 2025-07-24 00:48:54,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 20:49:19] 2025-07-24 00:48:54,005 | INFO     | traces error code: 0
[2025-07-23 20:49:19] 2025-07-24 00:48:54,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 20:49:19] 2025-07-24 00:49:10,809 | INFO     | PID=902616 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 20:49:19] 2025-07-24 00:49:10,810 | INFO     | .. there are 16 such processes running
[2025-07-23 20:49:19] 2025-07-24 00:49:10,810 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 20:49:19] 2025-07-24 00:49:10,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 20:49:19] 2025-07-24 00:49:10,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 20:49:19] 2025-07-24 00:49:10,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 20:49:19] 2025-07-24 00:49:10,810 | INFO     | [monitor] control thread has ended
[2025-07-23 20:49:19] 2025-07-24 00:49:10,899 [wrapper] ==== pilot stdout END ====
[2025-07-23 20:49:19] 2025-07-24 00:49:10,901 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 20:49:19] 2025-07-24 00:49:10,904 [wrapper] pilotpid: 902616
[2025-07-23 20:49:19] 2025-07-24 00:49:10,906 [wrapper] Pilot exit status: 0
[2025-07-23 20:49:19] 2025-07-24 00:49:10,915 [wrapper] pandaids: 6743232417
[2025-07-23 20:49:19] 2025-07-24 00:49:10,998 [wrapper] cleanup supervisor_pilot 1245442 902617
[2025-07-23 20:49:19] 2025-07-24 00:49:11,001 [wrapper] Test setup, not cleaning
[2025-07-23 20:49:19] 2025-07-24 00:49:11,004 [wrapper] apfmon messages muted
[2025-07-23 20:49:19] 2025-07-24 00:49:11,006 [wrapper] ==== wrapper stdout END ====
[2025-07-23 20:49:19] 2025-07-24 00:49:11,008 [wrapper] ==== wrapper stderr END ====
[2025-07-23 20:49:19]  *** Error codes and diagnostics ***
[2025-07-23 20:49:19]     "exeErrorCode": 0,
[2025-07-23 20:49:19]     "exeErrorDiag": "",
[2025-07-23 20:49:19]     "pilotErrorCode": 0,
[2025-07-23 20:49:19]     "pilotErrorDiag": "",
[2025-07-23 20:49:19]  *** Listing of results directory ***
[2025-07-23 20:49:19] total 522892
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 12:44 queuedata.json
[2025-07-23 20:49:19] -rwx------. 1 boincer umatlas     36292 Jul 23 12:45 runpilot2-wrapper.sh
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 12:45 pilot3.tar.gz
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas       100 Jul 23 19:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 20:49:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 19:37 run_atlas
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas       105 Jul 23 19:37 job.xml
[2025-07-23 20:49:19] -rw-r--r--. 2 boincer umatlas 305047933 Jul 23 19:38 EVNT.45668886._000042.pool.root.1
[2025-07-23 20:49:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 19:38 start_atlas.sh
[2025-07-23 20:49:19] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 19:38 shared
[2025-07-23 20:49:19] -rw-r--r--. 2 boincer umatlas    542874 Jul 23 19:38 input.tar.gz
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas         0 Jul 23 19:38 boinc_lockfile
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas      2540 Jul 23 19:38 pandaJob.out
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas    979640 Jul 23 19:38 agis_schedconf.cvmfs.json
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas   1593041 Jul 23 19:38 agis_ddmendpoints.agis.ALL.json
[2025-07-23 20:49:19] drwx------. 4 boincer umatlas      4096 Jul 23 19:38 pilot3
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas      7173 Jul 23 20:46 init_data.xml
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas 225092921 Jul 23 20:48 HITS.45668889._001079.pool.root.1
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas       529 Jul 23 20:48 boinc_task_state.xml
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas      1042 Jul 23 20:48 memory_monitor_summary.json
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas    291752 Jul 23 20:48 log.45668889._001079.job.log.tgz.1
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas        95 Jul 23 20:48 pilot_heartbeat.json
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas      7765 Jul 23 20:48 heartbeat.json
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas       822 Jul 23 20:49 pilotlog.txt
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas    419343 Jul 23 20:49 log.45668889._001079.job.log.1
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas       357 Jul 23 20:49 output.list
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas       620 Jul 23 20:49 runtime_log
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas    727040 Jul 23 20:49 result.tar.gz
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas      8674 Jul 23 20:49 runtime_log.err
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas       651 Jul 23 20:49 jYDLDm0lry7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVwLLDmzkVKXo.diag
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas        27 Jul 23 20:49 wrapper_checkpoint.txt
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 20:49 boinc_mmap_file
[2025-07-23 20:49:19] -rw-r--r--. 1 boincer umatlas     21940 Jul 23 20:49 stderr.txt
[2025-07-23 20:49:19] HITS file was successfully produced:
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas 225092921 Jul 23 20:48 shared/HITS.pool.root.1
[2025-07-23 20:49:19]  *** Contents of shared directory: ***
[2025-07-23 20:49:19] total 518988
[2025-07-23 20:49:19] -rw-r--r--. 2 boincer umatlas 305047933 Jul 23 19:38 ATLAS.root_0
[2025-07-23 20:49:19] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 19:38 start_atlas.sh
[2025-07-23 20:49:19] -rw-r--r--. 2 boincer umatlas    542874 Jul 23 19:38 input.tar.gz
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas 225092921 Jul 23 20:48 HITS.pool.root.1
[2025-07-23 20:49:19] -rw-------. 1 boincer umatlas    727040 Jul 23 20:49 result.tar.gz
20:49:21 (896229): run_atlas exited; CPU time 31353.914258
20:49:21 (896229): called boinc_finish(0)

</stderr_txt>
]]>

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