Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:18:43 (4006714): wrapper (7.7.26015): starting
19:18:43 (4006714): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 19:18:43] Arguments: --nthreads 8
[2025-07-23 19:18:43] Threads: 8
[2025-07-23 19:18:43] Checking for CVMFS
[2025-07-23 19:18:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 19:18:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 19:18:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 19:18:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 19:18:45] 2.13.0.0 3822049 13256 147420 148675 0 327 29401158 40960000 37953 16776704 1 136671514 99.630 133241038 8871 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 19:18:45] CVMFS is ok
[2025-07-23 19:18:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 19:18:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 19:18:45] Further information can be found at the LHC@home message board.
[2025-07-23 19:18:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 19:18:45] Checking for apptainer binary...
[2025-07-23 19:18:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 19:18:45] Running /usr/bin/apptainer --version
[2025-07-23 19:18:46] apptainer version 1.4.1-1.el9
[2025-07-23 19:18:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 19:18:46] c8-6-10.aglt2.org
[2025-07-23 19:18:46] apptainer works
[2025-07-23 19:18:46] Set ATHENA_PROC_NUMBER=8
[2025-07-23 19:18:46] Set ATHENA_CORE_NUMBER=8
[2025-07-23 19:18:46] Starting ATLAS job with PandaID=6743232336
[2025-07-23 19:18:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 20:54:24]  *** The last 200 lines of the pilot log: ***
[2025-07-23 20:54:24]  mtime=0
[2025-07-23 20:54:24]  protocol_id=None
[2025-07-23 20:54:24]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-23 20:54:24]  replicas=None
[2025-07-23 20:54:24]  scope=mc23_13p6TeV
[2025-07-23 20:54:24]  status=None
[2025-07-23 20:54:24]  status_code=0
[2025-07-23 20:54:24]  storage_token=
[2025-07-23 20:54:24]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6743232336/log.45668889._000998.job.log.tgz.1
[2025-07-23 20:54:24]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/03/log.45668889._000998.job.log.tgz.1
[2025-07-23 20:54:24]  workdir=None
[2025-07-23 20:54:24] ]
[2025-07-23 20:54:24] 2025-07-24 00:53:44,096 | INFO     | transferring file log.45668889._000998.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6743232336/log.45668889._000998.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-07-23 20:54:24] 2025-07-24 00:53:44,096 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6743232336/log.45668889._000998.job.log.tgz.1 /tmp/boinchome/slots/0/log.45668889._000998.job
[2025-07-23 20:54:24] 2025-07-24 00:53:44,112 | INFO     | adding to output.list: log.45668889._000998.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/de/03/log.45668889._000998.job.log.tg
[2025-07-23 20:54:24] 2025-07-24 00:53:44,112 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-23 20:54:24] 2025-07-24 00:53:44,112 | INFO     | summary of transferred files:
[2025-07-23 20:54:24] 2025-07-24 00:53:44,112 | INFO     |  -- lfn=log.45668889._000998.job.log.tgz.1, status_code=0, status=transferred
[2025-07-23 20:54:24] 2025-07-24 00:53:44,113 | INFO     | stage-out finished correctly
[2025-07-23 20:54:24] 2025-07-24 00:53:44,160 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-23 20:54:24] 2025-07-24 00:53:45,622 | INFO     | monitor loop #406: job 0:6743232336 is in state 'finished'
[2025-07-23 20:54:24] 2025-07-24 00:53:45,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 20:54:24] 2025-07-24 00:53:46,850 | INFO     | job 6743232336 has state=finished
[2025-07-23 20:54:24] 2025-07-24 00:53:46,850 | INFO     | preparing for final server update for job 6743232336 in state='finished'
[2025-07-23 20:54:24] 2025-07-24 00:53:46,851 | INFO     | this job has now completed (state=finished)
[2025-07-23 20:54:24] 2025-07-24 00:53:46,851 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-23 20:54:24] 2025-07-24 00:53:46,851 | INFO     | log transfer has been attempted: DONE
[2025-07-23 20:54:24] 2025-07-24 00:53:46,851 | INFO     | job 6743232336 has finished - writing final server update
[2025-07-23 20:54:24] 2025-07-24 00:53:46,851 | INFO     | total number of processed events: 400 (read)
[2025-07-23 20:54:24] 2025-07-24 00:53:46,853 | INFO     | executing command: lscpu
[2025-07-23 20:54:24] 2025-07-24 00:53:46,937 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 20:54:24] 2025-07-24 00:53:47,028 | INFO     | PID=4019920 has CPU usage=13.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 20:54:24] 2025-07-24 00:53:47,028 | INFO     | .. there are 33 such processes running
[2025-07-23 20:54:24] 2025-07-24 00:53:48,127 | INFO     | monitor loop #407: job 0:6743232336 is in state 'finished'
[2025-07-23 20:54:24] 2025-07-24 00:53:48,128 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 20:54:24] 2025-07-24 00:53:50,630 | INFO     | monitor loop #408: job 0:6743232336 is in state 'finished'
[2025-07-23 20:54:24] 2025-07-24 00:53:50,630 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 20:54:24] 2025-07-24 00:53:51,616 | INFO     | CPU arch script returned: x86-64-v4
[2025-07-23 20:54:24] 2025-07-24 00:53:51,622 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3767.6143359375046
[2025-07-23 20:54:24] 2025-07-24 00:53:51,636 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6743232336/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 20:54:24] 2025-07-24 00:53:51,637 | INFO     | extracted standard info from prmon json
[2025-07-23 20:54:24] 2025-07-24 00:53:51,637 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 20:54:24] 2025-07-24 00:53:51,637 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 20:54:24] 2025-07-24 00:53:51,637 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 20:54:24] 2025-07-24 00:53:51,637 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 20:54:24] 2025-07-24 00:53:51,638 | INFO     | fitting pss+swap vs Time
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | sum of square deviations: 183761585.0
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | sum of deviations: -12484467278.0
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | mean x: 1753315730.5
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | mean y: 2399192.595238095
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | -- intersect: 119119857095.61626
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | intersect: 119119857095.61626
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | chi2: 0.08695792690629767
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | -- intersect: 119119857095.61626
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | current memory leak: -67.94 B/s (using 84 data points, chi2=0.09)
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | could have reported an average CPU frequency of 3773 MHz (7 samples)
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | ..............................
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | . Timing measurements:
[2025-07-23 20:54:24] 2025-07-24 00:53:51,639 | INFO     | . get job = 0 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,640 | INFO     | . initial setup = 5 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,640 | INFO     | . payload setup = 37 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,640 | INFO     | . stage-in = 0 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,640 | INFO     | . payload execution = 5547 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,640 | INFO     | . stage-out = 0 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,640 | INFO     | . log creation = 0 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,640 | INFO     | ..............................
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | 
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | job summary report
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | --------------------------------------------------
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | PanDA job id: 6743232336
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | task id: 45668889
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | errors: (none)
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 20:54:24] 2025-07-24 00:53:51,772 | INFO     | pilot state: finished 
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | transexitcode: 0
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | exeerrorcode: 0
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | exeerrordiag: 
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | exitcode: 0
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | exitmsg: OK
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | cpuconsumptiontime: 32118 s
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | nevents: 400
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | neventsw: 0
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | pid: 4045436
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | pgrp: 4045436
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | corecount: 8
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | event service: False
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | sizes: {0: 2397419, 1: 2397419, 11: 2397447, 22: 2397475, 24: 2397765, 33: 2397793, 5588: 2424608, 5589: 2424607, 5590: 2433717, 5598: 2433855}
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | --------------------------------------------------
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | 
[2025-07-23 20:54:24] 2025-07-24 00:53:51,773 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 20:54:24] 2025-07-24 00:53:51,792 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,793 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,794 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 20:54:24] 2025-07-24 00:53:51,794 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,794 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 20:54:24] 2025-07-24 00:53:51,794 | INFO     | job 6743232336 has completed (purged errors)
[2025-07-23 20:54:24] 2025-07-24 00:53:51,794 | INFO     | overall cleanup function is called
[2025-07-23 20:54:24] 2025-07-24 00:53:52,801 | INFO     | --- collectZombieJob: --- 10, [4045436]
[2025-07-23 20:54:24] 2025-07-24 00:53:52,801 | INFO     | zombie collector waiting for pid 4045436
[2025-07-23 20:54:24] 2025-07-24 00:53:52,801 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 20:54:24] 2025-07-24 00:53:52,801 | INFO     | collected zombie processes
[2025-07-23 20:54:24] 2025-07-24 00:53:52,801 | INFO     | will attempt to kill all subprocesses of pid=4045436
[2025-07-23 20:54:24] 2025-07-24 00:53:53,230 | INFO     | process IDs to be killed: [4045436] (in reverse order)
[2025-07-23 20:54:24] 2025-07-24 00:53:53,402 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 20:54:24] 2025-07-24 00:53:53,402 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 20:54:24] 2025-07-24 00:53:53,436 | INFO     | did not find any defunct processes belonging to 4045436
[2025-07-23 20:54:24] 2025-07-24 00:53:53,459 | INFO     | did not find any defunct processes belonging to 4045436
[2025-07-23 20:54:24] 2025-07-24 00:53:53,459 | INFO     | ready for new job
[2025-07-23 20:54:24] 2025-07-24 00:53:53,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 20:54:24] 2025-07-24 00:53:53,461 | INFO     | ***************************************
[2025-07-23 20:54:24] 2025-07-24 00:53:53,461 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 20:54:24] 2025-07-24 00:53:53,461 | INFO     | ***************************************
[2025-07-23 20:54:24] 2025-07-24 00:53:53,461 | INFO     | 
[2025-07-23 20:54:24] 2025-07-24 00:53:53,478 | INFO     | architecture information:
[2025-07-23 20:54:24] 2025-07-24 00:53:53,478 | INFO     | executing command: cat /etc/os-release
[2025-07-23 20:54:24] 2025-07-24 00:53:53,493 | INFO     | cat /etc/os-release:
[2025-07-23 20:54:24] NAME="CentOS Linux"
[2025-07-23 20:54:24] VERSION="7 (Core)"
[2025-07-23 20:54:24] ID="centos"
[2025-07-23 20:54:24] ID_LIKE="rhel fedora"
[2025-07-23 20:54:24] VERSION_ID="7"
[2025-07-23 20:54:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 20:54:24] ANSI_COLOR="0;31"
[2025-07-23 20:54:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 20:54:24] HOME_URL="https://www.centos.org/"
[2025-07-23 20:54:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 20:54:24] 
[2025-07-23 20:54:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 20:54:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 20:54:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 20:54:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 20:54:24] 
[2025-07-23 20:54:24] 2025-07-24 00:53:53,493 | INFO     | ***************************************
[2025-07-23 20:54:24] 2025-07-24 00:53:53,996 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 20:54:24] 2025-07-24 00:53:54,016 | INFO     | sufficient remaining disk space (171393941504 B)
[2025-07-23 20:54:24] 2025-07-24 00:53:54,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 20:54:24] 2025-07-24 00:53:54,016 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 20:54:24] 2025-07-24 00:53:54,016 | INFO     | update_server=False
[2025-07-23 20:54:24] 2025-07-24 00:53:54,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 20:54:24] 2025-07-24 00:53:54,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 20:54:24] 2025-07-24 00:53:54,139 | INFO     | aborting loop
[2025-07-23 20:54:24] 2025-07-24 00:53:54,470 | INFO     | all job control threads have been joined
[2025-07-23 20:54:24] 2025-07-24 00:53:54,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 20:54:24] 2025-07-24 00:53:54,715 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 20:54:24] 2025-07-24 00:53:54,720 | INFO     | all data control threads have been joined
[2025-07-23 20:54:24] 2025-07-24 00:53:54,807 | INFO     | all payload control threads have been joined
[2025-07-23 20:54:24] 2025-07-24 00:53:55,026 | INFO     | [job] retrieve thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,146 | INFO     | [job] job monitor thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,297 | INFO     | [job] validate thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,329 | INFO     | [data] copytool_in thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,435 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,475 | INFO     | [job] control thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,622 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,623 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,725 | INFO     | [data] control thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,812 | INFO     | [payload] control thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:55,829 | INFO     | [payload] failed_post thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:56,310 | INFO     | [payload] validate_post thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:56,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:56,683 | INFO     | [data] copytool_out thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:56,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 20:54:24] 2025-07-24 00:53:57,703 | INFO     | [job] queue monitor thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:53:58,721 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 20:54:24] 2025-07-24 00:54:00,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791128708928)>', '<ExcThread(monitor, started 139790649390848)>']
[2025-07-23 20:54:24] 2025-07-24 00:54:05,438 | INFO     | all workflow threads have been joined
[2025-07-23 20:54:24] 2025-07-24 00:54:05,438 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 20:54:24] 2025-07-24 00:54:05,438 | INFO     | traces error code: 0
[2025-07-23 20:54:24] 2025-07-24 00:54:05,439 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 20:54:24] 2025-07-24 00:54:23,691 | INFO     | PID=4019920 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 20:54:24] 2025-07-24 00:54:23,691 | INFO     | .. there are 33 such processes running
[2025-07-23 20:54:24] 2025-07-24 00:54:23,692 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 20:54:24] 2025-07-24 00:54:23,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 20:54:24] 2025-07-24 00:54:23,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 20:54:24] 2025-07-24 00:54:23,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 20:54:24] 2025-07-24 00:54:23,692 | INFO     | [monitor] control thread has ended
[2025-07-23 20:54:24] 2025-07-24 00:54:23,796 [wrapper] ==== pilot stdout END ====
[2025-07-23 20:54:24] 2025-07-24 00:54:23,800 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 20:54:24] 2025-07-24 00:54:23,803 [wrapper] pilotpid: 4019920
[2025-07-23 20:54:24] 2025-07-24 00:54:23,805 [wrapper] Pilot exit status: 0
[2025-07-23 20:54:24] 2025-07-24 00:54:23,823 [wrapper] pandaids: 6743232336
[2025-07-23 20:54:24] 2025-07-24 00:54:23,935 [wrapper] cleanup supervisor_pilot  893991 4019921
[2025-07-23 20:54:24] 2025-07-24 00:54:23,939 [wrapper] Test setup, not cleaning
[2025-07-23 20:54:24] 2025-07-24 00:54:23,943 [wrapper] apfmon messages muted
[2025-07-23 20:54:24] 2025-07-24 00:54:23,946 [wrapper] ==== wrapper stdout END ====
[2025-07-23 20:54:24] 2025-07-24 00:54:23,949 [wrapper] ==== wrapper stderr END ====
[2025-07-23 20:54:24]  *** Error codes and diagnostics ***
[2025-07-23 20:54:24]     "exeErrorCode": 0,
[2025-07-23 20:54:24]     "exeErrorDiag": "",
[2025-07-23 20:54:24]     "pilotErrorCode": 0,
[2025-07-23 20:54:24]     "pilotErrorDiag": "",
[2025-07-23 20:54:24]  *** Listing of results directory ***
[2025-07-23 20:54:24] total 525188
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 12:33 pilot3.tar.gz
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 12:35 queuedata.json
[2025-07-23 20:54:24] -rwx------. 1 boincer umatlas     36292 Jul 23 12:36 runpilot2-wrapper.sh
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas       100 Jul 23 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 20:54:24] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 19:18 run_atlas
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas       105 Jul 23 19:18 job.xml
[2025-07-23 20:54:24] -rw-r--r--. 2 boincer umatlas 306642261 Jul 23 19:18 EVNT.45668886._000038.pool.root.1
[2025-07-23 20:54:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 19:18 start_atlas.sh
[2025-07-23 20:54:24] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 19:18 shared
[2025-07-23 20:54:24] -rw-r--r--. 2 boincer umatlas    542875 Jul 23 19:18 input.tar.gz
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas         0 Jul 23 19:18 boinc_lockfile
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas      2538 Jul 23 19:18 pandaJob.out
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas    979640 Jul 23 19:19 agis_schedconf.cvmfs.json
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas   1593041 Jul 23 19:19 agis_ddmendpoints.agis.ALL.json
[2025-07-23 20:54:24] drwx------. 4 boincer umatlas      4096 Jul 23 19:19 pilot3
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas      7159 Jul 23 20:46 init_data.xml
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas 225551078 Jul 23 20:53 HITS.45668889._000998.pool.root.1
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas       529 Jul 23 20:53 boinc_task_state.xml
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas      1060 Jul 23 20:53 memory_monitor_summary.json
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas    328867 Jul 23 20:53 log.45668889._000998.job.log.tgz.1
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas      7832 Jul 23 20:53 heartbeat.json
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 20:54 boinc_mmap_file
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas        27 Jul 23 20:54 wrapper_checkpoint.txt
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas        95 Jul 23 20:54 pilot_heartbeat.json
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas       823 Jul 23 20:54 pilotlog.txt
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas    533718 Jul 23 20:54 log.45668889._000998.job.log.1
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas       357 Jul 23 20:54 output.list
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas       620 Jul 23 20:54 runtime_log
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas    880640 Jul 23 20:54 result.tar.gz
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas      8655 Jul 23 20:54 runtime_log.err
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas       656 Jul 23 20:54 2QsMDmTdry7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrUwKDmTnsc9n.diag
[2025-07-23 20:54:24] -rw-r--r--. 1 boincer umatlas     21857 Jul 23 20:54 stderr.txt
[2025-07-23 20:54:24] HITS file was successfully produced:
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas 225551078 Jul 23 20:53 shared/HITS.pool.root.1
[2025-07-23 20:54:24]  *** Contents of shared directory: ***
[2025-07-23 20:54:24] total 521136
[2025-07-23 20:54:24] -rw-r--r--. 2 boincer umatlas 306642261 Jul 23 19:18 ATLAS.root_0
[2025-07-23 20:54:24] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 19:18 start_atlas.sh
[2025-07-23 20:54:24] -rw-r--r--. 2 boincer umatlas    542875 Jul 23 19:18 input.tar.gz
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas 225551078 Jul 23 20:53 HITS.pool.root.1
[2025-07-23 20:54:24] -rw-------. 1 boincer umatlas    880640 Jul 23 20:54 result.tar.gz
20:54:25 (4006714): run_atlas exited; CPU time 32211.392555
20:54:25 (4006714): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN