Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:28:16 (2672613): wrapper (7.7.26015): starting
16:28:16 (2672613): wrapper: running run_atlas (--nthreads 12)
[2025-07-25 16:28:16] Arguments: --nthreads 12
[2025-07-25 16:28:16] Threads: 12
[2025-07-25 16:28:16] Checking for CVMFS
[2025-07-25 16:28:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-25 16:28:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-25 16:28:16] Running cvmfs_config stat atlas.cern.ch
[2025-07-25 16:28:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-25 16:28:17] 2.13.0.0 1891415 1105 51276 148747 2 61 2551788 4096000 2736 130560 0 2123927 99.995 45073 302 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-07-25 16:28:17] CVMFS is ok
[2025-07-25 16:28:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 16:28:17] Checking for apptainer binary...
[2025-07-25 16:28:17] apptainer is not installed, using version from CVMFS
[2025-07-25 16:28:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 16:28:17] dualxeon2
[2025-07-25 16:28:17] apptainer works
[2025-07-25 16:28:17] Set ATHENA_PROC_NUMBER=12
[2025-07-25 16:28:17] Set ATHENA_CORE_NUMBER=12
[2025-07-25 16:28:17] Starting ATLAS job with PandaID=6743231872
[2025-07-25 16:28:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 19:15:09]  *** The last 200 lines of the pilot log: ***
[2025-07-25 19:15:09] 2025-07-25 19:14:36,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 19:15:09] 2025-07-25 19:14:36,639 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 19:15:09] 2025-07-25 19:14:36,642 | INFO     | fitting pss+swap vs Time
[2025-07-25 19:15:09] 2025-07-25 19:14:36,643 | INFO     | sum of square deviations: 1342841922.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,644 | INFO     | sum of deviations: 16699028586.999998
[2025-07-25 19:15:09] 2025-07-25 19:14:36,644 | INFO     | mean x: 1753465873.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,644 | INFO     | mean y: 2684237.4049079753
[2025-07-25 19:15:09] 2025-07-25 19:14:36,644 | INFO     | -- intersect: -21802694534.167213
[2025-07-25 19:15:09] 2025-07-25 19:14:36,644 | INFO     | intersect: -21802694534.167213
[2025-07-25 19:15:09] 2025-07-25 19:14:36,645 | INFO     | chi2: 1.5567759266494605
[2025-07-25 19:15:09] 2025-07-25 19:14:36,645 | INFO     | sum of square deviations: 1223016419.5
[2025-07-25 19:15:09] 2025-07-25 19:14:36,646 | INFO     | sum of deviations: 16294482473.500006
[2025-07-25 19:15:09] 2025-07-25 19:14:36,646 | INFO     | mean x: 1753465720.5
[2025-07-25 19:15:09] 2025-07-25 19:14:36,646 | INFO     | mean y: 2683722.3860759493
[2025-07-25 19:15:09] 2025-07-25 19:14:36,646 | INFO     | -- intersect: -23359076590.080696
[2025-07-25 19:15:09] 2025-07-25 19:14:36,646 | INFO     | intersect: -23359076590.080696
[2025-07-25 19:15:09] 2025-07-25 19:14:36,647 | INFO     | chi2: 1.558330151412568
[2025-07-25 19:15:09] 2025-07-25 19:14:36,647 | INFO     | current chi2=1.558330151412568 (change=-0.09983612519321027 %)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,647 | INFO     | right removable region: 157
[2025-07-25 19:15:09] 2025-07-25 19:14:36,647 | INFO     | sum of square deviations: 1223016419.5
[2025-07-25 19:15:09] 2025-07-25 19:14:36,648 | INFO     | sum of deviations: -11592471902.999994
[2025-07-25 19:15:09] 2025-07-25 19:14:36,648 | INFO     | mean x: 1753466025.5
[2025-07-25 19:15:09] 2025-07-25 19:14:36,649 | INFO     | mean y: 2719804.5443037977
[2025-07-25 19:15:09] 2025-07-25 19:14:36,649 | INFO     | -- intersect: 16623106341.778215
[2025-07-25 19:15:09] 2025-07-25 19:14:36,649 | INFO     | intersect: 16623106341.778215
[2025-07-25 19:15:09] 2025-07-25 19:14:36,649 | INFO     | chi2: 0.05614424203379782
[2025-07-25 19:15:09] 2025-07-25 19:14:36,649 | INFO     | current chi2=0.05614424203379782 (change=96.39355664018822 %)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,650 | INFO     | sum of square deviations: 1110539892.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,651 | INFO     | sum of deviations: -13293462637.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,651 | INFO     | mean x: 1753466178.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,651 | INFO     | mean y: 2722026.6535947714
[2025-07-25 19:15:09] 2025-07-25 19:14:36,651 | INFO     | -- intersect: 20992186061.581024
[2025-07-25 19:15:09] 2025-07-25 19:14:36,651 | INFO     | intersect: 20992186061.581024
[2025-07-25 19:15:09] 2025-07-25 19:14:36,652 | INFO     | chi2: 0.02344960911235173
[2025-07-25 19:15:09] 2025-07-25 19:14:36,652 | INFO     | current chi2=0.02344960911235173 (change=58.233278671327525 %)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,652 | INFO     | sum of square deviations: 1005179777.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,653 | INFO     | sum of deviations: -11818550041.999998
[2025-07-25 19:15:09] 2025-07-25 19:14:36,653 | INFO     | mean x: 1753466330.5
[2025-07-25 19:15:09] 2025-07-25 19:14:36,653 | INFO     | mean y: 2719888.3243243243
[2025-07-25 19:15:09] 2025-07-25 19:14:36,653 | INFO     | -- intersect: 20619359864.733597
[2025-07-25 19:15:09] 2025-07-25 19:14:36,654 | INFO     | intersect: 20619359864.733597
[2025-07-25 19:15:09] 2025-07-25 19:14:36,654 | INFO     | chi2: 0.023364828072868483
[2025-07-25 19:15:09] 2025-07-25 19:14:36,654 | INFO     | current chi2=0.023364828072868483 (change=0.3615456405991367 %)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,654 | INFO     | left removable region: 30
[2025-07-25 19:15:09] 2025-07-25 19:14:36,654 | INFO     | sum of square deviations: 635130048.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,655 | INFO     | sum of deviations: -6315322192.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,655 | INFO     | mean x: 1753466605.0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,655 | INFO     | mean y: 2711634.251968504
[2025-07-25 19:15:09] 2025-07-25 19:14:36,656 | INFO     | -- intersect: 17438048851.185844
[2025-07-25 19:15:09] 2025-07-25 19:14:36,656 | INFO     | intersect: 17438048851.185844
[2025-07-25 19:15:09] 2025-07-25 19:14:36,656 | INFO     | chi2: 0.02005590744301773
[2025-07-25 19:15:09] 2025-07-25 19:14:36,656 | INFO     | -- intersect: 17438048851.185844
[2025-07-25 19:15:09] 2025-07-25 19:14:36,656 | INFO     | current memory leak: -9.94 B/s (using 127 data points, chi2=0.02)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,657 | INFO     | could have reported an average CPU frequency of 2579 MHz (9 samples)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,657 | INFO     | ..............................
[2025-07-25 19:15:09] 2025-07-25 19:14:36,657 | INFO     | . Timing measurements:
[2025-07-25 19:15:09] 2025-07-25 19:14:36,657 | INFO     | . get job = 0 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,657 | INFO     | . initial setup = 1 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,658 | INFO     | . payload setup = 6 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,658 | INFO     | . stage-in = 0 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,658 | INFO     | . payload execution = 9935 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,658 | INFO     | . stage-out = 0 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,658 | INFO     | . log creation = 0 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,658 | INFO     | ..............................
[2025-07-25 19:15:09] 2025-07-25 19:14:36,866 | INFO     | 
[2025-07-25 19:15:09] 2025-07-25 19:14:36,867 | INFO     | job summary report
[2025-07-25 19:15:09] 2025-07-25 19:14:36,867 | INFO     | --------------------------------------------------
[2025-07-25 19:15:09] 2025-07-25 19:14:36,867 | INFO     | PanDA job id: 6743231872
[2025-07-25 19:15:09] 2025-07-25 19:14:36,867 | INFO     | task id: 45668757
[2025-07-25 19:15:09] 2025-07-25 19:14:36,867 | INFO     | errors: (none)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | pilot state: finished 
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | transexitcode: 0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | exeerrorcode: 0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | exeerrordiag: 
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | exitcode: 0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | exitmsg: OK
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | cpuconsumptiontime: 78142 s
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | nevents: 400
[2025-07-25 19:15:09] 2025-07-25 19:14:36,868 | INFO     | neventsw: 0
[2025-07-25 19:15:09] 2025-07-25 19:14:36,869 | INFO     | pid: 2683069
[2025-07-25 19:15:09] 2025-07-25 19:14:36,869 | INFO     | pgrp: 2683069
[2025-07-25 19:15:09] 2025-07-25 19:14:36,869 | INFO     | corecount: 12
[2025-07-25 19:15:09] 2025-07-25 19:14:36,869 | INFO     | event service: False
[2025-07-25 19:15:09] 2025-07-25 19:14:36,869 | INFO     | sizes: {0: 2397468, 1: 2397468, 4: 2397758, 11: 2397786, 9944: 2426402, 9945: 2426401, 9947: 2435629, 9949: 2435685, 9955: 2435943}
[2025-07-25 19:15:09] 2025-07-25 19:14:36,869 | INFO     | --------------------------------------------------
[2025-07-25 19:15:09] 2025-07-25 19:14:36,869 | INFO     | 
[2025-07-25 19:15:09] 2025-07-25 19:14:36,870 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-25 19:15:09] 2025-07-25 19:14:36,890 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,890 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,890 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,890 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,890 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,891 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,891 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,891 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,891 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,891 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,891 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,891 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,892 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 19:15:09] 2025-07-25 19:14:36,893 | INFO     | job 6743231872 has completed (purged errors)
[2025-07-25 19:15:09] 2025-07-25 19:14:36,893 | INFO     | overall cleanup function is called
[2025-07-25 19:15:09] 2025-07-25 19:14:37,901 | INFO     | --- collectZombieJob: --- 10, [2683069]
[2025-07-25 19:15:09] 2025-07-25 19:14:37,901 | INFO     | zombie collector waiting for pid 2683069
[2025-07-25 19:15:09] 2025-07-25 19:14:37,901 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 19:15:09] 2025-07-25 19:14:37,902 | INFO     | collected zombie processes
[2025-07-25 19:15:09] 2025-07-25 19:14:37,902 | INFO     | will attempt to kill all subprocesses of pid=2683069
[2025-07-25 19:15:09] 2025-07-25 19:14:38,085 | INFO     | process IDs to be killed: [2683069] (in reverse order)
[2025-07-25 19:15:09] 2025-07-25 19:14:38,142 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 19:15:09] 2025-07-25 19:14:38,142 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 19:15:09] 2025-07-25 19:14:38,147 | INFO     | did not find any defunct processes belonging to 2683069
[2025-07-25 19:15:09] 2025-07-25 19:14:38,151 | INFO     | did not find any defunct processes belonging to 2683069
[2025-07-25 19:15:09] 2025-07-25 19:14:38,151 | INFO     | ready for new job
[2025-07-25 19:15:09] 2025-07-25 19:14:38,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 19:15:09] 2025-07-25 19:14:38,154 | INFO     | ***************************************
[2025-07-25 19:15:09] 2025-07-25 19:14:38,154 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 19:15:09] 2025-07-25 19:14:38,154 | INFO     | ***************************************
[2025-07-25 19:15:09] 2025-07-25 19:14:38,154 | INFO     | 
[2025-07-25 19:15:09] 2025-07-25 19:14:38,156 | INFO     | architecture information:
[2025-07-25 19:15:09] 2025-07-25 19:14:38,157 | INFO     | executing command: cat /etc/os-release
[2025-07-25 19:15:09] 2025-07-25 19:14:38,169 | INFO     | cat /etc/os-release:
[2025-07-25 19:15:09] NAME="CentOS Linux"
[2025-07-25 19:15:09] VERSION="7 (Core)"
[2025-07-25 19:15:09] ID="centos"
[2025-07-25 19:15:09] ID_LIKE="rhel fedora"
[2025-07-25 19:15:09] VERSION_ID="7"
[2025-07-25 19:15:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 19:15:09] ANSI_COLOR="0;31"
[2025-07-25 19:15:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 19:15:09] HOME_URL="https://www.centos.org/"
[2025-07-25 19:15:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 19:15:09] 
[2025-07-25 19:15:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 19:15:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 19:15:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 19:15:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 19:15:09] 
[2025-07-25 19:15:09] 2025-07-25 19:14:38,169 | INFO     | ***************************************
[2025-07-25 19:15:09] 2025-07-25 19:14:38,671 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/1
[2025-07-25 19:15:09] 2025-07-25 19:14:38,685 | INFO     | sufficient remaining disk space (84697677824 B)
[2025-07-25 19:15:09] 2025-07-25 19:14:38,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 19:15:09] 2025-07-25 19:14:38,685 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 19:15:09] 2025-07-25 19:14:38,686 | INFO     | update_server=False
[2025-07-25 19:15:09] 2025-07-25 19:14:38,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 19:15:09] 2025-07-25 19:14:38,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:15:09] 2025-07-25 19:14:38,867 | INFO     | all payload control threads have been joined
[2025-07-25 19:15:09] 2025-07-25 19:14:38,868 | INFO     | all data control threads have been joined
[2025-07-25 19:15:09] 2025-07-25 19:14:39,041 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-25 19:15:09] 2025-07-25 19:14:39,042 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-25 19:15:09] 2025-07-25 19:14:39,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 19:15:09] 2025-07-25 19:14:39,042 | INFO     | will abort loop
[2025-07-25 19:15:09] 2025-07-25 19:14:39,185 | INFO     | all job control threads have been joined
[2025-07-25 19:15:09] 2025-07-25 19:14:39,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 19:15:09] 2025-07-25 19:14:39,691 | INFO     | [job] retrieve thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:39,691 | INFO     | [job] queue monitor thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:39,872 | INFO     | [payload] control thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:39,873 | INFO     | [data] control thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:40,047 | INFO     | [job] job monitor thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:40,189 | INFO     | [job] control thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:40,436 | INFO     | [payload] validate_post thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:40,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:40,448 | INFO     | [payload] failed_post thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:40,653 | INFO     | [job] validate thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:40,656 | INFO     | [data] copytool_in thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:41,024 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:41,130 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:41,130 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:41,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 19:15:09] 2025-07-25 19:14:41,663 | INFO     | [data] copytool_out thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:45,344 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 19:15:09] 2025-07-25 19:14:47,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129140766127936)>', '<ExcThread(monitor, started 129140128737024)>']
[2025-07-25 19:15:09] 2025-07-25 19:14:52,449 | INFO     | all workflow threads have been joined
[2025-07-25 19:15:09] 2025-07-25 19:14:52,450 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 19:15:09] 2025-07-25 19:14:52,450 | INFO     | traces error code: 0
[2025-07-25 19:15:09] 2025-07-25 19:14:52,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 19:15:09] 2025-07-25 19:15:09,240 | INFO     | PID=2676366 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-25 19:15:09] 2025-07-25 19:15:09,241 | INFO     | .. there are 4 such processes running
[2025-07-25 19:15:09] 2025-07-25 19:15:09,242 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 19:15:09] 2025-07-25 19:15:09,242 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 19:15:09] 2025-07-25 19:15:09,242 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 19:15:09] 2025-07-25 19:15:09,242 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 19:15:09] 2025-07-25 19:15:09,242 | INFO     | [monitor] control thread has ended
[2025-07-25 19:15:09] 2025-07-25 19:15:09,356 [wrapper] ==== pilot stdout END ====
[2025-07-25 19:15:09] 2025-07-25 19:15:09,358 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 19:15:09] 2025-07-25 19:15:09,361 [wrapper] pilotpid: 2676366
[2025-07-25 19:15:09] 2025-07-25 19:15:09,363 [wrapper] Pilot exit status: 0
[2025-07-25 19:15:09] 2025-07-25 19:15:09,373 [wrapper] pandaids: 6743231872
[2025-07-25 19:15:09] 2025-07-25 19:15:09,406 [wrapper] cleanup supervisor_pilot 2779529 2676367
[2025-07-25 19:15:09] 2025-07-25 19:15:09,409 [wrapper] Test setup, not cleaning
[2025-07-25 19:15:09] 2025-07-25 19:15:09,411 [wrapper] apfmon messages muted
[2025-07-25 19:15:09] 2025-07-25 19:15:09,414 [wrapper] ==== wrapper stdout END ====
[2025-07-25 19:15:09] 2025-07-25 19:15:09,416 [wrapper] ==== wrapper stderr END ====
[2025-07-25 19:15:09]  *** Error codes and diagnostics ***
[2025-07-25 19:15:09]     "exeErrorCode": 0,
[2025-07-25 19:15:09]     "exeErrorDiag": "",
[2025-07-25 19:15:09]     "pilotErrorCode": 0,
[2025-07-25 19:15:09]     "pilotErrorDiag": "",
[2025-07-25 19:15:09]  *** Listing of results directory ***
[2025-07-25 19:15:09] total 474088
[2025-07-25 19:15:09] -rw-r--r-- 1 boinc boinc    530466 Jul 23 16:03 pilot3.tar.gz
[2025-07-25 19:15:09] -rw-r--r-- 1 boinc boinc      5112 Jul 23 16:04 queuedata.json
[2025-07-25 19:15:09] -rwx------ 1 boinc boinc     36292 Jul 23 16:06 runpilot2-wrapper.sh
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc       100 Jul 25 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 19:15:09] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 16:28 run_atlas
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc       105 Jul 25 16:28 job.xml
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc      6596 Jul 25 16:28 init_data.xml
[2025-07-25 19:15:09] -rw-r--r-- 2 boinc boinc 278101335 Jul 25 16:28 EVNT.45668754._000049.pool.root.1
[2025-07-25 19:15:09] -rw-r--r-- 2 boinc boinc     15095 Jul 25 16:28 start_atlas.sh
[2025-07-25 19:15:09] drwxrwx--x 2 boinc boinc      4096 Jul 25 16:28 shared
[2025-07-25 19:15:09] -rw-r--r-- 2 boinc boinc    542878 Jul 25 16:28 input.tar.gz
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc         0 Jul 25 16:28 boinc_lockfile
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc      2541 Jul 25 16:28 pandaJob.out
[2025-07-25 19:15:09] -rw------- 1 boinc boinc    979309 Jul 25 16:28 agis_schedconf.cvmfs.json
[2025-07-25 19:15:09] -rw------- 1 boinc boinc   1593052 Jul 25 16:28 agis_ddmendpoints.agis.ALL.json
[2025-07-25 19:15:09] drwx------ 4 boinc boinc      4096 Jul 25 16:28 pilot3
[2025-07-25 19:15:09] -rw------- 1 boinc boinc 200747568 Jul 25 19:13 HITS.45668757._001221.pool.root.1
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc       529 Jul 25 19:14 boinc_task_state.xml
[2025-07-25 19:15:09] -rw------- 1 boinc boinc      1021 Jul 25 19:14 memory_monitor_summary.json
[2025-07-25 19:15:09] -rw------- 1 boinc boinc    409407 Jul 25 19:14 log.45668757._001221.job.log.tgz.1
[2025-07-25 19:15:09] -rw------- 1 boinc boinc      7768 Jul 25 19:14 heartbeat.json
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc        28 Jul 25 19:15 wrapper_checkpoint.txt
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc      8192 Jul 25 19:15 boinc_mmap_file
[2025-07-25 19:15:09] -rw------- 1 boinc boinc        95 Jul 25 19:15 pilot_heartbeat.json
[2025-07-25 19:15:09] -rw------- 1 boinc boinc       822 Jul 25 19:15 pilotlog.txt
[2025-07-25 19:15:09] -rw------- 1 boinc boinc    960852 Jul 25 19:15 log.45668757._001221.job.log.1
[2025-07-25 19:15:09] -rw------- 1 boinc boinc       357 Jul 25 19:15 output.list
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc       620 Jul 25 19:15 runtime_log
[2025-07-25 19:15:09] -rw------- 1 boinc boinc   1392640 Jul 25 19:15 result.tar.gz
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc      8970 Jul 25 19:15 runtime_log.err
[2025-07-25 19:15:09] -rw------- 1 boinc boinc       657 Jul 25 19:15 n8lKDmBAry7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKsLLDmwDVBOn.diag
[2025-07-25 19:15:09] -rw-rw-r-- 1 boinc boinc     20742 Jul 25 19:15 stderr.txt
[2025-07-25 19:15:09] HITS file was successfully produced:
[2025-07-25 19:15:09] -rw------- 1 boinc boinc 200747568 Jul 25 19:13 shared/HITS.pool.root.1
[2025-07-25 19:15:09]  *** Contents of shared directory: ***
[2025-07-25 19:15:09] total 469544
[2025-07-25 19:15:09] -rw-r--r-- 2 boinc boinc 278101335 Jul 25 16:28 ATLAS.root_0
[2025-07-25 19:15:09] -rw-r--r-- 2 boinc boinc     15095 Jul 25 16:28 start_atlas.sh
[2025-07-25 19:15:09] -rw-r--r-- 2 boinc boinc    542878 Jul 25 16:28 input.tar.gz
[2025-07-25 19:15:09] -rw------- 1 boinc boinc 200747568 Jul 25 19:13 HITS.pool.root.1
[2025-07-25 19:15:09] -rw------- 1 boinc boinc   1392640 Jul 25 19:15 result.tar.gz
19:15:11 (2672613): run_atlas exited; CPU time 78271.335144
19:15:11 (2672613): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN