Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:58:13 (1801): wrapper (7.7.26015): starting
17:58:13 (1801): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 17:58:13] Arguments: --nthreads 12
[2025-07-23 17:58:13] Threads: 12
[2025-07-23 17:58:13] Checking for CVMFS
[2025-07-23 17:58:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 17:58:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 17:58:13] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 17:58:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 17:58:14] 2.11.2.0 2984 106765 90512 148672 2 57 12716548 20275200 1 130560 0 35278493 99.970 9665820 10808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-07-23 17:58:14] CVMFS is ok
[2025-07-23 17:58:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 17:58:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 17:58:14] Further information can be found at the LHC@home message board.
[2025-07-23 17:58:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 17:58:14] Checking for apptainer binary...
[2025-07-23 17:58:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 17:58:14] Running /usr/bin/apptainer --version
[2025-07-23 17:58:14] apptainer version 1.3.2-1.el7
[2025-07-23 17:58:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 17:58:15] c-205-26.aglt2.org
[2025-07-23 17:58:15] apptainer works
[2025-07-23 17:58:15] Set ATHENA_PROC_NUMBER=12
[2025-07-23 17:58:15] Set ATHENA_CORE_NUMBER=12
[2025-07-23 17:58:15] Starting ATLAS job with PandaID=6743427683
[2025-07-23 17:58:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 19:57:34]  *** The last 200 lines of the pilot log: ***
[2025-07-23 19:57:34] 2025-07-23 23:57:00,507 | INFO     | intersect: 8177283581.510103
[2025-07-23 19:57:34] 2025-07-23 23:57:00,507 | INFO     | chi2: 0.06198663088504059
[2025-07-23 19:57:34] 2025-07-23 23:57:00,507 | INFO     | current chi2=0.06198663088504059 (change=95.80542532520954 %)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,507 | INFO     | sum of square deviations: 369281342.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,508 | INFO     | sum of deviations: -1092632701.500001
[2025-07-23 19:57:34] 2025-07-23 23:57:00,508 | INFO     | mean x: 1753311751.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,508 | INFO     | mean y: 2776431.669811321
[2025-07-23 19:57:34] 2025-07-23 23:57:00,508 | INFO     | -- intersect: 5190489795.805297
[2025-07-23 19:57:34] 2025-07-23 23:57:00,508 | INFO     | intersect: 5190489795.805297
[2025-07-23 19:57:34] 2025-07-23 23:57:00,508 | INFO     | chi2: 0.03250354359150407
[2025-07-23 19:57:34] 2025-07-23 23:57:00,508 | INFO     | current chi2=0.03250354359150407 (change=47.56362278862257 %)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,509 | INFO     | sum of square deviations: 319447850.0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,509 | INFO     | sum of deviations: 1873370573.0000005
[2025-07-23 19:57:34] 2025-07-23 23:57:00,509 | INFO     | mean x: 1753311904.0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,509 | INFO     | mean y: 2767454.099009901
[2025-07-23 19:57:34] 2025-07-23 23:57:00,509 | INFO     | -- intersect: -10279358176.87394
[2025-07-23 19:57:34] 2025-07-23 23:57:00,510 | INFO     | intersect: -10279358176.87394
[2025-07-23 19:57:34] 2025-07-23 23:57:00,510 | INFO     | chi2: 0.00025518434435912475
[2025-07-23 19:57:34] 2025-07-23 23:57:00,510 | INFO     | current chi2=0.00025518434435912475 (change=99.21490300391179 %)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,510 | INFO     | sum of square deviations: 274312120.0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,511 | INFO     | sum of deviations: 1468366959.5000002
[2025-07-23 19:57:34] 2025-07-23 23:57:00,511 | INFO     | mean x: 1753312056.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,511 | INFO     | mean y: 2768822.3645833335
[2025-07-23 19:57:34] 2025-07-23 23:57:00,511 | INFO     | -- intersect: -9382545590.493286
[2025-07-23 19:57:34] 2025-07-23 23:57:00,511 | INFO     | intersect: -9382545590.493286
[2025-07-23 19:57:34] 2025-07-23 23:57:00,511 | INFO     | chi2: 0.00018799137412989952
[2025-07-23 19:57:34] 2025-07-23 23:57:00,511 | INFO     | current chi2=0.00018799137412989952 (change=26.33114911417276 %)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,512 | INFO     | sum of square deviations: 233641590.0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,512 | INFO     | sum of deviations: 1149444838.0000002
[2025-07-23 19:57:34] 2025-07-23 23:57:00,512 | INFO     | mean x: 1753312209.0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,512 | INFO     | mean y: 2770012.945054945
[2025-07-23 19:57:34] 2025-07-23 23:57:00,512 | INFO     | -- intersect: -8622987362.004446
[2025-07-23 19:57:34] 2025-07-23 23:57:00,512 | INFO     | intersect: -8622987362.004446
[2025-07-23 19:57:34] 2025-07-23 23:57:00,513 | INFO     | chi2: 0.00013984766090689458
[2025-07-23 19:57:34] 2025-07-23 23:57:00,513 | INFO     | current chi2=0.00013984766090689458 (change=25.60953312131134 %)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,513 | INFO     | sum of square deviations: 197203697.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,513 | INFO     | sum of deviations: 914299506.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,513 | INFO     | mean x: 1753312361.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,514 | INFO     | mean y: 2770997.7325581396
[2025-07-23 19:57:34] 2025-07-23 23:57:00,514 | INFO     | -- intersect: -8126146700.982495
[2025-07-23 19:57:34] 2025-07-23 23:57:00,514 | INFO     | intersect: -8126146700.982495
[2025-07-23 19:57:34] 2025-07-23 23:57:00,514 | INFO     | chi2: 0.00012643921841840424
[2025-07-23 19:57:34] 2025-07-23 23:57:00,514 | INFO     | current chi2=0.00012643921841840424 (change=9.58789185427791 %)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,514 | INFO     | left removable region: 60
[2025-07-23 19:57:34] 2025-07-23 23:57:00,514 | INFO     | sum of square deviations: 38744912.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,515 | INFO     | sum of deviations: 83109602.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,515 | INFO     | mean x: 1753313093.5
[2025-07-23 19:57:34] 2025-07-23 23:57:00,515 | INFO     | mean y: 2774191.14
[2025-07-23 19:57:34] 2025-07-23 23:57:00,515 | INFO     | -- intersect: -3758162273.9721704
[2025-07-23 19:57:34] 2025-07-23 23:57:00,515 | INFO     | intersect: -3758162273.9721704
[2025-07-23 19:57:34] 2025-07-23 23:57:00,515 | INFO     | chi2: 6.41630161664066e-05
[2025-07-23 19:57:34] 2025-07-23 23:57:00,516 | INFO     | -- intersect: -3758162273.9721704
[2025-07-23 19:57:34] 2025-07-23 23:57:00,516 | INFO     | current memory leak: 2.15 B/s (using 50 data points, chi2=0.00)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,516 | INFO     | could have reported an average CPU frequency of 2125 MHz (7 samples)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,516 | INFO     | ..............................
[2025-07-23 19:57:34] 2025-07-23 23:57:00,516 | INFO     | . Timing measurements:
[2025-07-23 19:57:34] 2025-07-23 23:57:00,516 | INFO     | . get job = 0 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,516 | INFO     | . initial setup = 2 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,517 | INFO     | . payload setup = 9 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,517 | INFO     | . stage-in = 0 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,517 | INFO     | . payload execution = 7074 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,517 | INFO     | . stage-out = 0 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,517 | INFO     | . log creation = 0 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,517 | INFO     | ..............................
[2025-07-23 19:57:34] 2025-07-23 23:57:00,763 | INFO     | 
[2025-07-23 19:57:34] 2025-07-23 23:57:00,764 | INFO     | job summary report
[2025-07-23 19:57:34] 2025-07-23 23:57:00,764 | INFO     | --------------------------------------------------
[2025-07-23 19:57:34] 2025-07-23 23:57:00,764 | INFO     | PanDA job id: 6743427683
[2025-07-23 19:57:34] 2025-07-23 23:57:00,764 | INFO     | task id: 45697490
[2025-07-23 19:57:34] 2025-07-23 23:57:00,764 | INFO     | errors: (none)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,764 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | pilot state: finished 
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | transexitcode: 0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | exeerrorcode: 0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | exeerrordiag: 
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | exitcode: 0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | exitmsg: OK
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | cpuconsumptiontime: 77663 s
[2025-07-23 19:57:34] 2025-07-23 23:57:00,765 | INFO     | nevents: 400
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | neventsw: 0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | pid: 12079
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | pgrp: 12079
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | corecount: 12
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | event service: False
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | sizes: {0: 2397285, 1: 2397484, 5: 2397746, 11: 2397802, 7088: 2425089, 7090: 2434271, 7096: 2434409}
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | --------------------------------------------------
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | 
[2025-07-23 19:57:34] 2025-07-23 23:57:00,766 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 19:57:34] 2025-07-23 23:57:00,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,787 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,787 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,788 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,788 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,788 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,789 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,789 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,789 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,789 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 19:57:34] 2025-07-23 23:57:00,790 | INFO     | job 6743427683 has completed (purged errors)
[2025-07-23 19:57:34] 2025-07-23 23:57:00,790 | INFO     | overall cleanup function is called
[2025-07-23 19:57:34] 2025-07-23 23:57:01,794 | INFO     | --- collectZombieJob: --- 10, [12079]
[2025-07-23 19:57:34] 2025-07-23 23:57:01,794 | INFO     | zombie collector waiting for pid 12079
[2025-07-23 19:57:34] 2025-07-23 23:57:01,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 19:57:34] 2025-07-23 23:57:01,794 | INFO     | collected zombie processes
[2025-07-23 19:57:34] 2025-07-23 23:57:01,794 | INFO     | will attempt to kill all subprocesses of pid=12079
[2025-07-23 19:57:34] 2025-07-23 23:57:01,891 | INFO     | process IDs to be killed: [12079] (in reverse order)
[2025-07-23 19:57:34] 2025-07-23 23:57:01,941 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 19:57:34] 2025-07-23 23:57:01,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 19:57:34] 2025-07-23 23:57:01,945 | INFO     | did not find any defunct processes belonging to 12079
[2025-07-23 19:57:34] 2025-07-23 23:57:01,948 | INFO     | did not find any defunct processes belonging to 12079
[2025-07-23 19:57:34] 2025-07-23 23:57:01,948 | INFO     | ready for new job
[2025-07-23 19:57:34] 2025-07-23 23:57:01,948 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 19:57:34] 2025-07-23 23:57:01,949 | INFO     | ***************************************
[2025-07-23 19:57:34] 2025-07-23 23:57:01,949 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 19:57:34] 2025-07-23 23:57:01,950 | INFO     | ***************************************
[2025-07-23 19:57:34] 2025-07-23 23:57:01,950 | INFO     | 
[2025-07-23 19:57:34] 2025-07-23 23:57:01,950 | INFO     | architecture information:
[2025-07-23 19:57:34] 2025-07-23 23:57:01,951 | INFO     | executing command: cat /etc/os-release
[2025-07-23 19:57:34] 2025-07-23 23:57:01,967 | INFO     | cat /etc/os-release:
[2025-07-23 19:57:34] NAME="CentOS Linux"
[2025-07-23 19:57:34] VERSION="7 (Core)"
[2025-07-23 19:57:34] ID="centos"
[2025-07-23 19:57:34] ID_LIKE="rhel fedora"
[2025-07-23 19:57:34] VERSION_ID="7"
[2025-07-23 19:57:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 19:57:34] ANSI_COLOR="0;31"
[2025-07-23 19:57:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 19:57:34] HOME_URL="https://www.centos.org/"
[2025-07-23 19:57:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 19:57:34] 
[2025-07-23 19:57:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 19:57:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 19:57:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 19:57:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 19:57:34] 
[2025-07-23 19:57:34] 2025-07-23 23:57:01,968 | INFO     | ***************************************
[2025-07-23 19:57:34] 2025-07-23 23:57:02,471 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 19:57:34] 2025-07-23 23:57:02,541 | INFO     | sufficient remaining disk space (29006757888 B)
[2025-07-23 19:57:34] 2025-07-23 23:57:02,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 19:57:34] 2025-07-23 23:57:02,542 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 19:57:34] 2025-07-23 23:57:02,542 | INFO     | update_server=False
[2025-07-23 19:57:34] 2025-07-23 23:57:02,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 19:57:34] 2025-07-23 23:57:02,542 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 19:57:34] 2025-07-23 23:57:02,639 | INFO     | all job control threads have been joined
[2025-07-23 19:57:34] 2025-07-23 23:57:02,712 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-07-23 19:57:34] 2025-07-23 23:57:02,712 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-07-23 19:57:34] 2025-07-23 23:57:02,712 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 19:57:34] 2025-07-23 23:57:02,713 | INFO     | will abort loop
[2025-07-23 19:57:34] 2025-07-23 23:57:02,973 | INFO     | all payload control threads have been joined
[2025-07-23 19:57:34] 2025-07-23 23:57:03,164 | INFO     | all data control threads have been joined
[2025-07-23 19:57:34] 2025-07-23 23:57:03,167 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 19:57:34] 2025-07-23 23:57:03,543 | INFO     | [job] retrieve thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:03,546 | INFO     | [job] queue monitor thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:03,578 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:03,593 | INFO     | [job] validate thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:03,621 | INFO     | [payload] validate_post thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:03,640 | INFO     | [job] control thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:03,718 | INFO     | [job] job monitor thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:03,978 | INFO     | [payload] control thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:04,022 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:04,079 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:04,170 | INFO     | [data] control thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:04,262 | INFO     | [data] copytool_in thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:04,608 | INFO     | [payload] failed_post thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:05,173 | INFO     | [data] copytool_out thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:05,752 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 19:57:34] 2025-07-23 23:57:09,758 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:12,631 | INFO     | job.realtimelogging is not enabled
[2025-07-23 19:57:34] 2025-07-23 23:57:13,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 19:57:34] 2025-07-23 23:57:14,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140176928405312)>', '<ExcThread(monitor, started 140176013633280)>']
[2025-07-23 19:57:34] 2025-07-23 23:57:19,995 | INFO     | all workflow threads have been joined
[2025-07-23 19:57:34] 2025-07-23 23:57:19,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 19:57:34] 2025-07-23 23:57:19,999 | INFO     | traces error code: 0
[2025-07-23 19:57:34] 2025-07-23 23:57:20,000 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 19:57:34] 2025-07-23 23:57:33,733 | INFO     | PID=5539 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-23 19:57:34] 2025-07-23 23:57:33,733 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 19:57:34] 2025-07-23 23:57:33,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 19:57:34] 2025-07-23 23:57:33,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 19:57:34] 2025-07-23 23:57:33,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 19:57:34] 2025-07-23 23:57:33,734 | INFO     | [monitor] control thread has ended
[2025-07-23 19:57:34] 2025-07-23 23:57:33,833 [wrapper] ==== pilot stdout END ====
[2025-07-23 19:57:34] 2025-07-23 23:57:33,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 19:57:34] 2025-07-23 23:57:33,840 [wrapper] pilotpid: 5539
[2025-07-23 19:57:34] 2025-07-23 23:57:33,844 [wrapper] Pilot exit status: 0
[2025-07-23 19:57:34] 2025-07-23 23:57:33,859 [wrapper] pandaids: 6743427683
[2025-07-23 19:57:34] 2025-07-23 23:57:33,900 [wrapper] cleanup supervisor_pilot 27545 5540
[2025-07-23 19:57:34] 2025-07-23 23:57:33,904 [wrapper] Test setup, not cleaning
[2025-07-23 19:57:34] 2025-07-23 23:57:33,908 [wrapper] apfmon messages muted
[2025-07-23 19:57:34] 2025-07-23 23:57:33,912 [wrapper] ==== wrapper stdout END ====
[2025-07-23 19:57:34] 2025-07-23 23:57:33,916 [wrapper] ==== wrapper stderr END ====
[2025-07-23 19:57:34]  *** Error codes and diagnostics ***
[2025-07-23 19:57:34]     "exeErrorCode": 0,
[2025-07-23 19:57:34]     "exeErrorDiag": "",
[2025-07-23 19:57:34]     "pilotErrorCode": 0,
[2025-07-23 19:57:34]     "pilotErrorDiag": "",
[2025-07-23 19:57:34]  *** Listing of results directory ***
[2025-07-23 19:57:34] total 650828
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas    530466 Jul 23 11:06 pilot3.tar.gz
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas      5112 Jul 23 11:21 queuedata.json
[2025-07-23 19:57:34] -rwx------ 1 boincer umatlas     36292 Jul 23 11:21 runpilot2-wrapper.sh
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas       100 Jul 23 17:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 19:57:34] -rwxr-xr-x 1 boincer umatlas      7986 Jul 23 17:58 run_atlas
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas       105 Jul 23 17:58 job.xml
[2025-07-23 19:57:34] -rw-r--r-- 2 boincer umatlas 346312833 Jul 23 17:58 EVNT.45697488._000149.pool.root.1
[2025-07-23 19:57:34] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 17:58 start_atlas.sh
[2025-07-23 19:57:34] drwxrwx--x 2 boincer umatlas      4096 Jul 23 17:58 shared
[2025-07-23 19:57:34] -rw-r--r-- 2 boincer umatlas    542909 Jul 23 17:58 input.tar.gz
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas         0 Jul 23 17:58 boinc_lockfile
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas      2592 Jul 23 17:58 pandaJob.out
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas    979632 Jul 23 17:58 agis_schedconf.cvmfs.json
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas   1593041 Jul 23 17:58 agis_ddmendpoints.agis.ALL.json
[2025-07-23 19:57:34] drwx------ 4 boincer umatlas      4096 Jul 23 17:58 pilot3
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas 314167811 Jul 23 19:56 HITS.45697490._006238.pool.root.1
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas       530 Jul 23 19:56 boinc_task_state.xml
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas      1051 Jul 23 19:56 memory_monitor_summary.json
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas    384179 Jul 23 19:56 log.45697490._006238.job.log.tgz.1
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas      7847 Jul 23 19:57 heartbeat.json
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas        95 Jul 23 19:57 pilot_heartbeat.json
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas      5867 Jul 23 19:57 init_data.xml
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas      8192 Jul 23 19:57 boinc_mmap_file
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas        27 Jul 23 19:57 wrapper_checkpoint.txt
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas       744 Jul 23 19:57 pilotlog.txt
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas    657703 Jul 23 19:57 log.45697490._006238.job.log.1
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas       357 Jul 23 19:57 output.list
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas       620 Jul 23 19:57 runtime_log
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas   1064960 Jul 23 19:57 result.tar.gz
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas      8662 Jul 23 19:57 runtime_log.err
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas       660 Jul 23 19:57 2lrNDmZSqy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmtOwKDmrsWw3n.diag
[2025-07-23 19:57:34] -rw-r--r-- 1 boincer umatlas     20942 Jul 23 19:57 stderr.txt
[2025-07-23 19:57:34] HITS file was successfully produced:
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas 314167811 Jul 23 19:56 shared/HITS.pool.root.1
[2025-07-23 19:57:34]  *** Contents of shared directory: ***
[2025-07-23 19:57:34] total 646604
[2025-07-23 19:57:34] -rw-r--r-- 2 boincer umatlas 346312833 Jul 23 17:58 ATLAS.root_0
[2025-07-23 19:57:34] -rw-r--r-- 2 boincer umatlas     15095 Jul 23 17:58 start_atlas.sh
[2025-07-23 19:57:34] -rw-r--r-- 2 boincer umatlas    542909 Jul 23 17:58 input.tar.gz
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas 314167811 Jul 23 19:56 HITS.pool.root.1
[2025-07-23 19:57:34] -rw------- 1 boincer umatlas   1064960 Jul 23 19:57 result.tar.gz
19:57:35 (1801): run_atlas exited; CPU time 77636.350528
19:57:35 (1801): called boinc_finish(0)

</stderr_txt>
]]>

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