Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:36:18 (206781): wrapper (7.7.26015): starting
14:36:18 (206781): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 14:36:18] Arguments: --nthreads 12
[2025-07-23 14:36:18] Threads: 12
[2025-07-23 14:36:18] Checking for CVMFS
[2025-07-23 14:36:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 14:36:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 14:36:19] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 14:36:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 14:36:19] 2.11.5.0 6492 31932 208468 148672 0 415 45501423 45568000 19749 130560 0 267993822 99.769 186626155 26263 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-23 14:36:19] CVMFS is ok
[2025-07-23 14:36:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 14:36:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 14:36:19] Further information can be found at the LHC@home message board.
[2025-07-23 14:36:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 14:36:19] Checking for apptainer binary...
[2025-07-23 14:36:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 14:36:19] Running /usr/bin/apptainer --version
[2025-07-23 14:36:20] apptainer version 1.4.1-1.el9
[2025-07-23 14:36:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 14:36:20] wns0028.triumf.lcg
[2025-07-23 14:36:20] apptainer works
[2025-07-23 14:36:20] Set ATHENA_PROC_NUMBER=12
[2025-07-23 14:36:20] Set ATHENA_CORE_NUMBER=12
[2025-07-23 14:36:21] Starting ATLAS job with PandaID=6743749513
[2025-07-23 14:36:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 14:42:16]  *** The last 200 lines of the pilot log: ***
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | wrong length of table data, x=[1753306721.0], y=[2231.0] (must be same and length>=4)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | could have reported an average CPU frequency of 2635 MHz (4 samples)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | ..............................
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | . Timing measurements:
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . get job = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . initial setup = 4 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . payload setup = 23 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . stage-in = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . payload execution = 60 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . stage-out = 2 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . log creation = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | ..............................
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743749513/pilotlog.txt
[2025-07-23 14:42:16] 2025-07-23 21:41:41,802 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 14:42:16] - Log from pilotlog.txt -
[2025-07-23 14:42:16] 2025-07-23 21:41:41,721 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6743749513/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | INFO     | extracted standard info from prmon json
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | wrong length of table data, x=[1753306721.0], y=[2231.0] (must be same and length>=4)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | could have reported an average CPU frequency of 2635 MHz (4 samples)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | ..............................
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | . Timing measurements:
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . get job = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . initial setup = 4 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . payload setup = 23 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . stage-in = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . payload execution = 60 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . stage-out = 2 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . log creation = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | ..............................
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743749513/pilotlog.txt
[2025-07-23 14:42:16] 2025-07-23 21:41:41,802 | WARNING  | 
[2025-07-23 14:42:16] [begin log extracts]
[2025-07-23 14:42:16] - Log from pilotlog.txt -
[2025-07-23 14:42:16] 2025-07-23 21:41:41,721 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6743749513/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | INFO     | extracted standard info from prmon json
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 14:42:16] 2025-07-23 21:41:41,743 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | WARNING  | wrong length of table data, x=[1753306721.0], y=[2231.0] (must be same and length>=4)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | could have reported an average CPU frequency of 2635 MHz (4 samples)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | ..............................
[2025-07-23 14:42:16] 2025-07-23 21:41:41,744 | INFO     | . Timing measurements:
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . get job = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . initial setup = 4 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . payload setup = 23 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . stage-in = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . payload execution = 60 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . stage-out = 2 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | . log creation = 0 s
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | ..............................
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 14:42:16] 2025-07-23 21:41:41,745 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743749513/pilotlog.txt
[2025-07-23 14:42:16] [end log extracts]
[2025-07-23 14:42:16] 2025-07-23 21:41:41,802 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 14:42:16] 2025-07-23 21:41:41,803 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 14:42:16] 2025-07-23 21:41:42,430 | INFO     | 
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | job summary report
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | --------------------------------------------------
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | PanDA job id: 6743749513
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | task id: 45697453
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 14:39:07,835 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | pilot state: failed 
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | transexitcode: 65
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | exeerrorcode: 65
[2025-07-23 14:42:16] 2025-07-23 21:41:42,431 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | exitcode: 65
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | cpuconsumptiontime: 17 s
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | nevents: 0
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | neventsw: 0
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | pid: 216740
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | pgrp: 216740
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | corecount: 12
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | event service: False
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | sizes: {0: 2396667, 1: 2397349, 2: 2397548, 13: 2397548, 24: 2397894, 35: 2397894, 88: 2421403, 91: 2425695, 93: 2425723, 231: 2425889}
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | --------------------------------------------------
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | 
[2025-07-23 14:42:16] 2025-07-23 21:41:42,432 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 14:42:16] 2025-07-23 21:41:42,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 14:42:16] 2025-07-23 21:41:42,529 | INFO     | job 6743749513 has completed (purged errors)
[2025-07-23 14:42:16] 2025-07-23 21:41:42,530 | INFO     | overall cleanup function is called
[2025-07-23 14:42:16] 2025-07-23 21:41:43,536 | INFO     | --- collectZombieJob: --- 10, [216740]
[2025-07-23 14:42:16] 2025-07-23 21:41:43,536 | INFO     | zombie collector waiting for pid 216740
[2025-07-23 14:42:16] 2025-07-23 21:41:43,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 14:42:16] 2025-07-23 21:41:43,536 | INFO     | collected zombie processes
[2025-07-23 14:42:16] 2025-07-23 21:41:43,536 | INFO     | will attempt to kill all subprocesses of pid=216740
[2025-07-23 14:42:16] 2025-07-23 21:41:44,481 | INFO     | process IDs to be killed: [216740] (in reverse order)
[2025-07-23 14:42:16] 2025-07-23 21:41:44,688 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 14:42:16] 2025-07-23 21:41:44,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 14:42:16] 2025-07-23 21:41:44,767 | INFO     | did not find any defunct processes belonging to 216740
[2025-07-23 14:42:16] 2025-07-23 21:41:44,829 | INFO     | did not find any defunct processes belonging to 216740
[2025-07-23 14:42:16] 2025-07-23 21:41:44,830 | INFO     | ready for new job
[2025-07-23 14:42:16] 2025-07-23 21:41:44,854 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 14:42:16] 2025-07-23 21:41:44,855 | INFO     | ***************************************
[2025-07-23 14:42:16] 2025-07-23 21:41:44,855 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 14:42:16] 2025-07-23 21:41:44,855 | INFO     | ***************************************
[2025-07-23 14:42:16] 2025-07-23 21:41:44,855 | INFO     | 
[2025-07-23 14:42:16] 2025-07-23 21:41:44,857 | INFO     | architecture information:
[2025-07-23 14:42:16] 2025-07-23 21:41:44,893 | INFO     | executing command: cat /etc/os-release
[2025-07-23 14:42:16] 2025-07-23 21:41:44,975 | INFO     | cat /etc/os-release:
[2025-07-23 14:42:16] NAME="CentOS Linux"
[2025-07-23 14:42:16] VERSION="7 (Core)"
[2025-07-23 14:42:16] ID="centos"
[2025-07-23 14:42:16] ID_LIKE="rhel fedora"
[2025-07-23 14:42:16] VERSION_ID="7"
[2025-07-23 14:42:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 14:42:16] ANSI_COLOR="0;31"
[2025-07-23 14:42:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 14:42:16] HOME_URL="https://www.centos.org/"
[2025-07-23 14:42:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 14:42:16] 
[2025-07-23 14:42:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 14:42:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 14:42:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 14:42:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 14:42:16] 
[2025-07-23 14:42:16] 2025-07-23 21:41:44,975 | INFO     | ***************************************
[2025-07-23 14:42:16] 2025-07-23 21:41:45,480 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 14:42:16] 2025-07-23 21:41:45,610 | INFO     | sufficient remaining disk space (1828913676288 B)
[2025-07-23 14:42:16] 2025-07-23 21:41:45,611 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 14:42:16] 2025-07-23 21:41:45,611 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 14:42:16] 2025-07-23 21:41:45,611 | INFO     | update_server=False
[2025-07-23 14:42:16] 2025-07-23 21:41:45,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 14:42:16] 2025-07-23 21:41:45,660 | INFO     | all data control threads have been joined
[2025-07-23 14:42:16] 2025-07-23 21:41:45,664 | INFO     | all payload control threads have been joined
[2025-07-23 14:42:16] 2025-07-23 21:41:45,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 14:42:16] 2025-07-23 21:41:45,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 14:42:16] 2025-07-23 21:41:46,210 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 14:42:16] 2025-07-23 21:41:46,210 | INFO     | aborting loop
[2025-07-23 14:42:16] 2025-07-23 21:41:46,617 | INFO     | [job] retrieve thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:46,666 | INFO     | [data] control thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:46,670 | INFO     | [payload] control thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:46,709 | INFO     | [data] copytool_in thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:46,710 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:46,818 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:46,818 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:46,981 | INFO     | [payload] failed_post thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:47,032 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 14:42:16] 2025-07-23 21:41:47,078 | INFO     | all job control threads have been joined
[2025-07-23 14:42:16] 2025-07-23 21:41:47,216 | INFO     | [job] job monitor thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:47,261 | INFO     | [job] validate thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:47,445 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:47,538 | INFO     | [payload] validate_post thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:47,819 | INFO     | [data] copytool_out thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:48,038 | INFO     | [job] queue monitor thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:48,084 | INFO     | [job] control thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:49,843 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 14:42:16] 2025-07-23 21:41:50,718 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600708740928)>', '<ExcThread(monitor, started 140600158439168)>']
[2025-07-23 14:42:16] 2025-07-23 21:41:55,744 | INFO     | all workflow threads have been joined
[2025-07-23 14:42:16] 2025-07-23 21:41:55,744 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 14:42:16] 2025-07-23 21:41:55,744 | INFO     | traces error code: 0
[2025-07-23 14:42:16] 2025-07-23 21:41:55,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 14:42:16] 2025-07-23 21:42:15,002 | INFO     | PID=210363 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-07-23 14:42:16] 2025-07-23 21:42:15,002 | INFO     | .. there are 35 such processes running
[2025-07-23 14:42:16] 2025-07-23 21:42:15,003 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 14:42:16] 2025-07-23 21:42:15,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 14:42:16] 2025-07-23 21:42:15,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 14:42:16] 2025-07-23 21:42:15,003 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 14:42:16] 2025-07-23 21:42:15,003 | INFO     | [monitor] control thread has ended
[2025-07-23 14:42:16] 2025-07-23 21:42:15,284 [wrapper] ==== pilot stdout END ====
[2025-07-23 14:42:16] 2025-07-23 21:42:15,286 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 14:42:16] 2025-07-23 21:42:15,288 [wrapper] pilotpid: 210363
[2025-07-23 14:42:16] 2025-07-23 21:42:15,289 [wrapper] Pilot exit status: 0
[2025-07-23 14:42:16] 2025-07-23 21:42:15,314 [wrapper] pandaids: 6743749513
[2025-07-23 14:42:16] 2025-07-23 21:42:15,406 [wrapper] cleanup supervisor_pilot  210369 210364
[2025-07-23 14:42:16] 2025-07-23 21:42:15,420 [wrapper] Test setup, not cleaning
[2025-07-23 14:42:16] 2025-07-23 21:42:15,432 [wrapper] apfmon messages muted
[2025-07-23 14:42:16] 2025-07-23 21:42:15,440 [wrapper] ==== wrapper stdout END ====
[2025-07-23 14:42:16] 2025-07-23 21:42:15,455 [wrapper] ==== wrapper stderr END ====
[2025-07-23 14:42:16]  *** Error codes and diagnostics ***
[2025-07-23 14:42:16]     "exeErrorCode": 65,
[2025-07-23 14:42:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 14:42:16]     "pilotErrorCode": 1305,
[2025-07-23 14:42:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 14:42:16]  *** Listing of results directory ***
[2025-07-23 14:42:16] total 316628
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc    530466 Jul 23 10:45 pilot3.tar.gz
[2025-07-23 14:42:16] -rwx------. 1 boinc boinc     36292 Jul 23 11:14 runpilot2-wrapper.sh
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc      5112 Jul 23 11:14 queuedata.json
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc       100 Jul 23 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 14:42:16] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 14:36 run_atlas
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc       105 Jul 23 14:36 job.xml
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc      6595 Jul 23 14:36 init_data.xml
[2025-07-23 14:42:16] -rw-r--r--. 2 boinc boinc 320138748 Jul 23 14:36 EVNT.45697451._000008.pool.root.1
[2025-07-23 14:42:16] -rw-r--r--. 2 boinc boinc     15095 Jul 23 14:36 start_atlas.sh
[2025-07-23 14:42:16] drwxrwx--x. 2 boinc boinc      4096 Jul 23 14:36 shared
[2025-07-23 14:42:16] -rw-r--r--. 2 boinc boinc    542901 Jul 23 14:36 input.tar.gz
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc         0 Jul 23 14:36 boinc_lockfile
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc      2631 Jul 23 14:36 pandaJob.out
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc    979632 Jul 23 14:36 agis_schedconf.cvmfs.json
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc   1593041 Jul 23 14:36 agis_ddmendpoints.agis.ALL.json
[2025-07-23 14:42:16] drwx------. 4 boinc boinc      4096 Jul 23 14:36 pilot3
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc       523 Jul 23 14:39 boinc_task_state.xml
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc       955 Jul 23 14:39 memory_monitor_summary.json
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc     21970 Jul 23 14:39 log.45697453._006375.job.log.tgz.1
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc      8389 Jul 23 14:41 heartbeat.json
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc      8192 Jul 23 14:42 boinc_mmap_file
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc       822 Jul 23 14:42 pilotlog.txt
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc        95 Jul 23 14:42 pilot_heartbeat.json
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc        22 Jul 23 14:42 wrapper_checkpoint.txt
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc     82725 Jul 23 14:42 log.45697453._006375.job.log.1
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc       188 Jul 23 14:42 output.list
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc       620 Jul 23 14:42 runtime_log
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc    122880 Jul 23 14:42 result.tar.gz
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc      8485 Jul 23 14:42 runtime_log.err
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc       644 Jul 23 14:42 3poKDmw9sy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT1LLDmFapovn.diag
[2025-07-23 14:42:16] -rw-r--r--. 1 boinc boinc     21817 Jul 23 14:42 stderr.txt
[2025-07-23 14:42:16] No HITS result produced
[2025-07-23 14:42:16]  *** Contents of shared directory: ***
[2025-07-23 14:42:16] total 313308
[2025-07-23 14:42:16] -rw-r--r--. 2 boinc boinc 320138748 Jul 23 14:36 ATLAS.root_0
[2025-07-23 14:42:16] -rw-r--r--. 2 boinc boinc     15095 Jul 23 14:36 start_atlas.sh
[2025-07-23 14:42:16] -rw-r--r--. 2 boinc boinc    542901 Jul 23 14:36 input.tar.gz
[2025-07-23 14:42:16] -rw-------. 1 boinc boinc    122880 Jul 23 14:42 result.tar.gz
14:42:17 (206781): run_atlas exited; CPU time 29.784378
14:42:17 (206781): called boinc_finish(0)

</stderr_txt>
]]>

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