Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:57:43 (2564454): wrapper (7.7.26015): starting
16:57:43 (2564454): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 16:57:43] Arguments: --nthreads 8
[2025-07-23 16:57:43] Threads: 8
[2025-07-23 16:57:43] Checking for CVMFS
[2025-07-23 16:57:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 16:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 16:57:44] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 16:57:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 16:57:45] 2.13.0.0 3724680 13695 228020 148670 3 526 29563769 32935937 20926 16776704 0 66766233 99.481 108354272 20336 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 16:57:45] CVMFS is ok
[2025-07-23 16:57:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 16:57:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 16:57:45] Further information can be found at the LHC@home message board.
[2025-07-23 16:57:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 16:57:45] Checking for apptainer binary...
[2025-07-23 16:57:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 16:57:45] Running /usr/bin/apptainer --version
[2025-07-23 16:57:45] apptainer version 1.4.1-1.el9
[2025-07-23 16:57:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 16:57:45] c7-4-31.aglt2.org
[2025-07-23 16:57:45] apptainer works
[2025-07-23 16:57:45] Set ATHENA_PROC_NUMBER=8
[2025-07-23 16:57:45] Set ATHENA_CORE_NUMBER=8
[2025-07-23 16:57:45] Starting ATLAS job with PandaID=6742919243
[2025-07-23 16:57:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 21:31:15]  *** The last 200 lines of the pilot log: ***
[2025-07-23 21:31:15] 2025-07-24 01:30:38,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,157 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 21:31:15] 2025-07-24 01:30:40,177 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3005.085833333332
[2025-07-23 21:31:15] 2025-07-24 01:30:40,251 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6742919243/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,251 | INFO     | extracted standard info from prmon json
[2025-07-23 21:31:15] 2025-07-24 01:30:40,252 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 21:31:15] 2025-07-24 01:30:40,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 21:31:15] 2025-07-24 01:30:40,252 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 21:31:15] 2025-07-24 01:30:40,252 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 21:31:15] 2025-07-24 01:30:40,256 | INFO     | fitting pss+swap vs Time
[2025-07-23 21:31:15] 2025-07-24 01:30:40,257 | INFO     | sum of square deviations: 5902024391.460659
[2025-07-23 21:31:15] 2025-07-24 01:30:40,258 | INFO     | sum of deviations: 103616784316.58414
[2025-07-23 21:31:15] 2025-07-24 01:30:40,259 | INFO     | mean x: 1753312445.0449438
[2025-07-23 21:31:15] 2025-07-24 01:30:40,259 | INFO     | mean y: 2165365.284644195
[2025-07-23 21:31:15] 2025-07-24 01:30:40,259 | INFO     | -- intersect: -30779238676.463745
[2025-07-23 21:31:15] 2025-07-24 01:30:40,259 | INFO     | intersect: -30779238676.463745
[2025-07-23 21:31:15] 2025-07-24 01:30:40,259 | INFO     | chi2: 1.9165996471995415
[2025-07-23 21:31:15] 2025-07-24 01:30:40,259 | INFO     | sum of square deviations: 5576617298.950345
[2025-07-23 21:31:15] 2025-07-24 01:30:40,261 | INFO     | sum of deviations: 106288311410.82443
[2025-07-23 21:31:15] 2025-07-24 01:30:40,261 | INFO     | mean x: 1753312292.5458016
[2025-07-23 21:31:15] 2025-07-24 01:30:40,261 | INFO     | mean y: 2166604.9312977097
[2025-07-23 21:31:15] 2025-07-24 01:30:40,261 | INFO     | -- intersect: -33415332384.21603
[2025-07-23 21:31:15] 2025-07-24 01:30:40,261 | INFO     | intersect: -33415332384.21603
[2025-07-23 21:31:15] 2025-07-24 01:30:40,262 | INFO     | chi2: 1.872819404288239
[2025-07-23 21:31:15] 2025-07-24 01:30:40,262 | INFO     | current chi2=1.872819404288239 (change=2.284266459887567 %)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,262 | INFO     | right removable region: 261
[2025-07-23 21:31:15] 2025-07-24 01:30:40,262 | INFO     | sum of square deviations: 5576609978.950345
[2025-07-23 21:31:15] 2025-07-24 01:30:40,264 | INFO     | sum of deviations: 63445710908.324425
[2025-07-23 21:31:15] 2025-07-24 01:30:40,264 | INFO     | mean x: 1753312597.5458016
[2025-07-23 21:31:15] 2025-07-24 01:30:40,264 | INFO     | mean y: 2184064.4312977097
[2025-07-23 21:31:15] 2025-07-24 01:30:40,264 | INFO     | -- intersect: -19945448030.283066
[2025-07-23 21:31:15] 2025-07-24 01:30:40,264 | INFO     | intersect: -19945448030.283066
[2025-07-23 21:31:15] 2025-07-24 01:30:40,264 | INFO     | chi2: 0.44012988306375467
[2025-07-23 21:31:15] 2025-07-24 01:30:40,265 | INFO     | current chi2=0.44012988306375467 (change=77.03589877485084 %)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,265 | INFO     | sum of square deviations: 5263381841.43967
[2025-07-23 21:31:15] 2025-07-24 01:30:40,266 | INFO     | sum of deviations: 48471615397.51753
[2025-07-23 21:31:15] 2025-07-24 01:30:40,267 | INFO     | mean x: 1753312750.0466926
[2025-07-23 21:31:15] 2025-07-24 01:30:40,277 | INFO     | mean y: 2191354.373540856
[2025-07-23 21:31:15] 2025-07-24 01:30:40,277 | INFO     | -- intersect: -16144442853.829992
[2025-07-23 21:31:15] 2025-07-24 01:30:40,277 | INFO     | intersect: -16144442853.829992
[2025-07-23 21:31:15] 2025-07-24 01:30:40,278 | INFO     | chi2: 0.33941753223253157
[2025-07-23 21:31:15] 2025-07-24 01:30:40,278 | INFO     | current chi2=0.33941753223253157 (change=22.88241601096522 %)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,278 | INFO     | left removable region: 20
[2025-07-23 21:31:15] 2025-07-24 01:30:40,278 | INFO     | sum of square deviations: 4340259324.497927
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | sum of deviations: 34457073833.012474
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | mean x: 1753312872.045643
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | mean y: 2202407.726141079
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | -- intersect: -13917249534.569141
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | intersect: -13917249534.569141
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | chi2: 0.21992267916273647
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | -- intersect: -13917249534.569141
[2025-07-23 21:31:15] 2025-07-24 01:30:40,280 | INFO     | current memory leak: 7.94 B/s (using 241 data points, chi2=0.22)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,281 | INFO     | could have reported an average CPU frequency of 3010 MHz (12 samples)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,281 | INFO     | ..............................
[2025-07-23 21:31:15] 2025-07-24 01:30:40,281 | INFO     | . Timing measurements:
[2025-07-23 21:31:15] 2025-07-24 01:30:40,281 | INFO     | . get job = 0 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,281 | INFO     | . initial setup = 3 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,281 | INFO     | . payload setup = 16 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,281 | INFO     | . stage-in = 0 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,282 | INFO     | . payload execution = 16292 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,282 | INFO     | . stage-out = 4 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,282 | INFO     | . log creation = 0 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,282 | INFO     | ..............................
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | 
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | job summary report
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | --------------------------------------------------
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | PanDA job id: 6742919243
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | task id: 45697490
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | errors: (none)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | pilot state: finished 
[2025-07-23 21:31:15] 2025-07-24 01:30:40,429 | INFO     | transexitcode: 0
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | exeerrorcode: 0
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | exeerrordiag: 
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | exitcode: 0
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | exitmsg: OK
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | cpuconsumptiontime: 56621 s
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | nevents: 400
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | neventsw: 0
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | pid: 2582701
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | pgrp: 2582701
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | corecount: 8
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | event service: False
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | sizes: {0: 2397506, 10: 2397768, 11: 2397796, 16313: 2429726, 16314: 2429725, 16318: 2438779, 16319: 2438963, 16333: 2439157}
[2025-07-23 21:31:15] 2025-07-24 01:30:40,430 | INFO     | --------------------------------------------------
[2025-07-23 21:31:15] 2025-07-24 01:30:40,431 | INFO     | 
[2025-07-23 21:31:15] 2025-07-24 01:30:40,431 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,460 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | job 6742919243 has completed (purged errors)
[2025-07-23 21:31:15] 2025-07-24 01:30:40,461 | INFO     | overall cleanup function is called
[2025-07-23 21:31:15] 2025-07-24 01:30:41,024 | INFO     | PID=2568490 has CPU usage=11.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-07-23 21:31:15] 2025-07-24 01:30:41,024 | INFO     | .. there are 18 such processes running
[2025-07-23 21:31:15] 2025-07-24 01:30:41,470 | INFO     | --- collectZombieJob: --- 10, [2582701]
[2025-07-23 21:31:15] 2025-07-24 01:30:41,470 | INFO     | zombie collector waiting for pid 2582701
[2025-07-23 21:31:15] 2025-07-24 01:30:41,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 21:31:15] 2025-07-24 01:30:41,470 | INFO     | collected zombie processes
[2025-07-23 21:31:15] 2025-07-24 01:30:41,470 | INFO     | will attempt to kill all subprocesses of pid=2582701
[2025-07-23 21:31:15] 2025-07-24 01:30:42,593 | INFO     | process IDs to be killed: [2582701] (in reverse order)
[2025-07-23 21:31:15] 2025-07-24 01:30:42,795 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 21:31:15] 2025-07-24 01:30:42,795 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 21:31:15] 2025-07-24 01:30:42,813 | INFO     | did not find any defunct processes belonging to 2582701
[2025-07-23 21:31:15] 2025-07-24 01:30:42,833 | INFO     | did not find any defunct processes belonging to 2582701
[2025-07-23 21:31:15] 2025-07-24 01:30:42,834 | INFO     | ready for new job
[2025-07-23 21:31:15] 2025-07-24 01:30:42,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 21:31:15] 2025-07-24 01:30:42,839 | INFO     | ***************************************
[2025-07-23 21:31:15] 2025-07-24 01:30:42,841 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 21:31:15] 2025-07-24 01:30:42,841 | INFO     | ***************************************
[2025-07-23 21:31:15] 2025-07-24 01:30:42,841 | INFO     | 
[2025-07-23 21:31:15] 2025-07-24 01:30:42,865 | INFO     | architecture information:
[2025-07-23 21:31:15] 2025-07-24 01:30:42,865 | INFO     | executing command: cat /etc/os-release
[2025-07-23 21:31:15] 2025-07-24 01:30:42,884 | INFO     | cat /etc/os-release:
[2025-07-23 21:31:15] NAME="CentOS Linux"
[2025-07-23 21:31:15] VERSION="7 (Core)"
[2025-07-23 21:31:15] ID="centos"
[2025-07-23 21:31:15] ID_LIKE="rhel fedora"
[2025-07-23 21:31:15] VERSION_ID="7"
[2025-07-23 21:31:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 21:31:15] ANSI_COLOR="0;31"
[2025-07-23 21:31:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 21:31:15] HOME_URL="https://www.centos.org/"
[2025-07-23 21:31:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 21:31:15] 
[2025-07-23 21:31:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 21:31:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 21:31:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 21:31:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 21:31:15] 
[2025-07-23 21:31:15] 2025-07-24 01:30:42,884 | INFO     | ***************************************
[2025-07-23 21:31:15] 2025-07-24 01:30:43,388 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-07-23 21:31:15] 2025-07-24 01:30:43,419 | INFO     | sufficient remaining disk space (74646028288 B)
[2025-07-23 21:31:15] 2025-07-24 01:30:43,419 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 21:31:15] 2025-07-24 01:30:43,419 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 21:31:15] 2025-07-24 01:30:43,419 | INFO     | update_server=False
[2025-07-23 21:31:15] 2025-07-24 01:30:43,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 21:31:15] 2025-07-24 01:30:43,488 | INFO     | all payload control threads have been joined
[2025-07-23 21:31:15] 2025-07-24 01:30:43,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 21:31:15] 2025-07-24 01:30:44,012 | INFO     | all data control threads have been joined
[2025-07-23 21:31:15] 2025-07-24 01:30:44,303 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 21:31:15] 2025-07-24 01:30:44,303 | INFO     | aborting loop
[2025-07-23 21:31:15] 2025-07-24 01:30:44,425 | INFO     | [job] retrieve thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:44,494 | INFO     | [payload] control thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:44,615 | INFO     | [job] validate thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:44,934 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,018 | INFO     | [data] control thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,093 | INFO     | [payload] failed_post thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,153 | INFO     | all job control threads have been joined
[2025-07-23 21:31:15] 2025-07-24 01:30:45,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 21:31:15] 2025-07-24 01:30:45,309 | INFO     | [job] job monitor thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,334 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,334 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,440 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 21:31:15] 2025-07-24 01:30:45,555 | INFO     | [data] copytool_in thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,575 | INFO     | [data] copytool_out thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,858 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:45,864 | INFO     | [payload] validate_post thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:46,159 | INFO     | [job] control thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:46,446 | INFO     | [job] queue monitor thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:49,206 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 21:31:15] 2025-07-24 01:30:49,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185607370560)>', '<ExcThread(monitor, started 140184972683008)>']
[2025-07-23 21:31:15] 2025-07-24 01:30:54,517 | INFO     | all workflow threads have been joined
[2025-07-23 21:31:15] 2025-07-24 01:30:54,517 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 21:31:15] 2025-07-24 01:30:54,517 | INFO     | traces error code: 0
[2025-07-23 21:31:15] 2025-07-24 01:30:54,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 21:31:15] 2025-07-24 01:31:14,566 | INFO     | PID=2568490 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 21:31:15] 2025-07-24 01:31:14,567 | INFO     | .. there are 18 such processes running
[2025-07-23 21:31:15] 2025-07-24 01:31:14,576 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 21:31:15] 2025-07-24 01:31:14,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 21:31:15] 2025-07-24 01:31:14,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 21:31:15] 2025-07-24 01:31:14,576 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 21:31:15] 2025-07-24 01:31:14,576 | CRITICAL | thread 'MainThread' is not alive
[2025-07-23 21:31:15] 2025-07-24 01:31:14,576 | INFO     | [monitor] control thread has ended
[2025-07-23 21:31:15] 2025-07-24 01:31:14,968 [wrapper] ==== pilot stdout END ====
[2025-07-23 21:31:15] 2025-07-24 01:31:14,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 21:31:15] 2025-07-24 01:31:14,975 [wrapper] pilotpid: 2568490
[2025-07-23 21:31:15] 2025-07-24 01:31:14,978 [wrapper] Pilot exit status: 0
[2025-07-23 21:31:15] 2025-07-24 01:31:15,002 [wrapper] pandaids: 6742919243
[2025-07-23 21:31:15] 2025-07-24 01:31:15,102 [wrapper] cleanup supervisor_pilot 3467411 2568491
[2025-07-23 21:31:15] 2025-07-24 01:31:15,106 [wrapper] Test setup, not cleaning
[2025-07-23 21:31:15] 2025-07-24 01:31:15,109 [wrapper] apfmon messages muted
[2025-07-23 21:31:15] 2025-07-24 01:31:15,112 [wrapper] ==== wrapper stdout END ====
[2025-07-23 21:31:15] 2025-07-24 01:31:15,115 [wrapper] ==== wrapper stderr END ====
[2025-07-23 21:31:15]  *** Error codes and diagnostics ***
[2025-07-23 21:31:15]     "exeErrorCode": 0,
[2025-07-23 21:31:15]     "exeErrorDiag": "",
[2025-07-23 21:31:15]     "pilotErrorCode": 0,
[2025-07-23 21:31:15]     "pilotErrorDiag": "",
[2025-07-23 21:31:15]  *** Listing of results directory ***
[2025-07-23 21:31:15] total 640044
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 09:11 pilot3.tar.gz
[2025-07-23 21:31:15] -rwx------. 1 boincer umatlas     36292 Jul 23 09:40 runpilot2-wrapper.sh
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 09:40 queuedata.json
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas       100 Jul 23 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 21:31:15] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 16:57 run_atlas
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas       105 Jul 23 16:57 job.xml
[2025-07-23 21:31:15] -rw-r--r--. 2 boincer umatlas 342506868 Jul 23 16:57 EVNT.45697488._000239.pool.root.1
[2025-07-23 21:31:15] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 16:57 start_atlas.sh
[2025-07-23 21:31:15] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 16:57 shared
[2025-07-23 21:31:15] -rw-r--r--. 2 boincer umatlas    542897 Jul 23 16:57 input.tar.gz
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas         0 Jul 23 16:57 boinc_lockfile
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas      2592 Jul 23 16:57 pandaJob.out
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas    979632 Jul 23 16:58 agis_schedconf.cvmfs.json
[2025-07-23 21:31:15] drwx------. 4 boincer umatlas      4096 Jul 23 16:58 pilot3
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas 305476179 Jul 23 21:29 HITS.45697490._005503.pool.root.1
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas       531 Jul 23 21:29 boinc_task_state.xml
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas      6935 Jul 23 21:29 init_data.xml
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas      1057 Jul 23 21:30 memory_monitor_summary.json
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas   1593041 Jul 23 21:30 agis_ddmendpoints.agis.ALL.json
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas    406035 Jul 23 21:30 log.45697490._005503.job.log.tgz.1
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas      7789 Jul 23 21:30 heartbeat.json
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas        95 Jul 23 21:30 pilot_heartbeat.json
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 21:31 boinc_mmap_file
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas        28 Jul 23 21:31 wrapper_checkpoint.txt
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas       893 Jul 23 21:31 pilotlog.txt
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas   1366185 Jul 23 21:31 log.45697490._005503.job.log.1
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas       357 Jul 23 21:31 output.list
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas       620 Jul 23 21:31 runtime_log
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas   1792000 Jul 23 21:31 result.tar.gz
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas       658 Jul 23 21:31 UUvLDmrsoy7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmzeLLDm8AaqAo.diag
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas      8656 Jul 23 21:31 runtime_log.err
[2025-07-23 21:31:15] -rw-r--r--. 1 boincer umatlas     21303 Jul 23 21:31 stderr.txt
[2025-07-23 21:31:15] HITS file was successfully produced:
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas 305476179 Jul 23 21:29 shared/HITS.pool.root.1
[2025-07-23 21:31:15]  *** Contents of shared directory: ***
[2025-07-23 21:31:15] total 635104
[2025-07-23 21:31:15] -rw-r--r--. 2 boincer umatlas 342506868 Jul 23 16:57 ATLAS.root_0
[2025-07-23 21:31:15] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 16:57 start_atlas.sh
[2025-07-23 21:31:15] -rw-r--r--. 2 boincer umatlas    542897 Jul 23 16:57 input.tar.gz
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas 305476179 Jul 23 21:29 HITS.pool.root.1
[2025-07-23 21:31:15] -rw-------. 1 boincer umatlas   1792000 Jul 23 21:31 result.tar.gz
21:31:17 (2564454): run_atlas exited; CPU time 57211.027997
21:31:17 (2564454): called boinc_finish(0)

</stderr_txt>
]]>

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