Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:50:27 (2603152): wrapper (7.7.26015): starting
03:50:27 (2603152): wrapper: running run_atlas (--nthreads 12)
[2025-07-24 03:50:27] Arguments: --nthreads 12
[2025-07-24 03:50:27] Threads: 12
[2025-07-24 03:50:27] Checking for CVMFS
[2025-07-24 03:50:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 03:50:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 03:50:27] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 03:50:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 03:50:27] 2.13.1.0 8846 27914 145044 148677 1 196 33914998 46080000 7952 130560 0 244303647 99.906 67721628 26936 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-07-24 03:50:27] CVMFS is ok
[2025-07-24 03:50:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-24 03:50:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-24 03:50:27] Further information can be found at the LHC@home message board.
[2025-07-24 03:50:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 03:50:27] Checking for apptainer binary...
[2025-07-24 03:50:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 03:50:27] Running /usr/bin/apptainer --version
[2025-07-24 03:50:27] apptainer version 1.4.1-1.el9
[2025-07-24 03:50:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 03:50:28] mff2101.farm.particle.cz
[2025-07-24 03:50:28] apptainer works
[2025-07-24 03:50:28] Set ATHENA_PROC_NUMBER=12
[2025-07-24 03:50:28] Set ATHENA_CORE_NUMBER=12
[2025-07-24 03:50:28] Starting ATLAS job with PandaID=6741890418
[2025-07-24 03:50:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 05:14:22]  *** The last 200 lines of the pilot log: ***
[2025-07-24 05:14:22]  mtime=0
[2025-07-24 05:14:22]  protocol_id=None
[2025-07-24 05:14:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-07-24 05:14:22]  replicas=None
[2025-07-24 05:14:22]  scope=mc23_13p6TeV
[2025-07-24 05:14:22]  status=None
[2025-07-24 05:14:22]  status_code=0
[2025-07-24 05:14:22]  storage_token=
[2025-07-24 05:14:22]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-6741890418/log.45697472._004556.job.log.tgz.1
[2025-07-24 05:14:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/9c/log.45697472._004556.job.log.tgz.1
[2025-07-24 05:14:22]  workdir=None
[2025-07-24 05:14:22] ]
[2025-07-24 05:14:22] 2025-07-24 03:13:40,168 | INFO     | transferring file log.45697472._004556.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-6741890418/log.45697472._004556.job.log.tgz.1 to /scratch/.boinc/slot
[2025-07-24 05:14:22] 2025-07-24 03:13:40,168 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-6741890418/log.45697472._004556.job.log.tgz.1 /scratch/.boinc/slots/0/log.45697472._004556.j
[2025-07-24 05:14:22] 2025-07-24 03:13:40,200 | INFO     | adding to output.list: log.45697472._004556.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/9c/log.45697472._004556.job.log.tg
[2025-07-24 05:14:22] 2025-07-24 03:13:40,201 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-07-24 05:14:22] 2025-07-24 03:13:40,201 | INFO     | summary of transferred files:
[2025-07-24 05:14:22] 2025-07-24 03:13:40,201 | INFO     |  -- lfn=log.45697472._004556.job.log.tgz.1, status_code=0, status=transferred
[2025-07-24 05:14:22] 2025-07-24 03:13:40,202 | INFO     | stage-out finished correctly
[2025-07-24 05:14:22] 2025-07-24 03:13:40,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-07-24 05:14:22] 2025-07-24 03:13:40,613 | INFO     | monitor loop #361: job 0:6741890418 is in state 'finished'
[2025-07-24 05:14:22] 2025-07-24 03:13:40,613 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 05:14:22] 2025-07-24 03:13:42,698 | INFO     | job 6741890418 has state=finished
[2025-07-24 05:14:22] 2025-07-24 03:13:42,698 | INFO     | preparing for final server update for job 6741890418 in state='finished'
[2025-07-24 05:14:22] 2025-07-24 03:13:42,699 | INFO     | this job has now completed (state=finished)
[2025-07-24 05:14:22] 2025-07-24 03:13:42,699 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-07-24 05:14:22] 2025-07-24 03:13:42,699 | INFO     | log transfer has been attempted: DONE
[2025-07-24 05:14:22] 2025-07-24 03:13:42,699 | INFO     | job 6741890418 has finished - writing final server update
[2025-07-24 05:14:22] 2025-07-24 03:13:42,700 | INFO     | total number of processed events: 400 (read)
[2025-07-24 05:14:22] 2025-07-24 03:13:42,701 | INFO     | executing command: lscpu
[2025-07-24 05:14:22] 2025-07-24 03:13:42,786 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-24 05:14:22] 2025-07-24 03:13:43,117 | INFO     | monitor loop #362: job 0:6741890418 is in state 'finished'
[2025-07-24 05:14:22] 2025-07-24 03:13:43,118 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 05:14:22] 2025-07-24 03:13:45,621 | INFO     | monitor loop #363: job 0:6741890418 is in state 'finished'
[2025-07-24 05:14:22] 2025-07-24 03:13:45,622 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 05:14:22] 2025-07-24 03:13:48,125 | INFO     | monitor loop #364: job 0:6741890418 is in state 'finished'
[2025-07-24 05:14:22] 2025-07-24 03:13:48,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-24 05:14:22] 2025-07-24 03:13:48,967 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-24 05:14:22] 2025-07-24 03:13:48,983 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2774.8690208333333
[2025-07-24 05:14:22] 2025-07-24 03:13:49,001 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6741890418/memory_monitor_summary.json (trf name=prmon)
[2025-07-24 05:14:22] 2025-07-24 03:13:49,002 | INFO     | extracted standard info from prmon json
[2025-07-24 05:14:22] 2025-07-24 03:13:49,002 | INFO     | extracted standard memory fields from prmon json
[2025-07-24 05:14:22] 2025-07-24 03:13:49,002 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-24 05:14:22] 2025-07-24 03:13:49,003 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 05:14:22] 2025-07-24 03:13:49,003 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 05:14:22] 2025-07-24 03:13:49,005 | INFO     | fitting pss+swap vs Time
[2025-07-24 05:14:22] 2025-07-24 03:13:49,005 | INFO     | sum of square deviations: 130793150.0
[2025-07-24 05:14:22] 2025-07-24 03:13:49,005 | INFO     | sum of deviations: 73517993.00000003
[2025-07-24 05:14:22] 2025-07-24 03:13:49,005 | INFO     | mean x: 1753324431.0
[2025-07-24 05:14:22] 2025-07-24 03:13:49,006 | INFO     | mean y: 2768914.32
[2025-07-24 05:14:22] 2025-07-24 03:13:49,006 | INFO     | -- intersect: -982763533.2507406
[2025-07-24 05:14:22] 2025-07-24 03:13:49,006 | INFO     | intersect: -982763533.2507406
[2025-07-24 05:14:22] 2025-07-24 03:13:49,006 | INFO     | chi2: 0.0037845143380607813
[2025-07-24 05:14:22] 2025-07-24 03:13:49,006 | INFO     | -- intersect: -982763533.2507406
[2025-07-24 05:14:22] 2025-07-24 03:13:49,006 | INFO     | current memory leak: 0.56 B/s (using 75 data points, chi2=0.00)
[2025-07-24 05:14:22] 2025-07-24 03:13:49,006 | INFO     | could have reported an average CPU frequency of 2762 MHz (6 samples)
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | ..............................
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . Timing measurements:
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . get job = 0 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . initial setup = 1 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . payload setup = 8 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . stage-in = 0 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . payload execution = 4951 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . stage-out = 0 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | . log creation = 0 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,007 | INFO     | ..............................
[2025-07-24 05:14:22] 2025-07-24 03:13:49,178 | INFO     | 
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | job summary report
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | --------------------------------------------------
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | PanDA job id: 6741890418
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | task id: 45697472
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | errors: (none)
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | pilot state: finished 
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | transexitcode: 0
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | exeerrorcode: 0
[2025-07-24 05:14:22] 2025-07-24 03:13:49,179 | INFO     | exeerrordiag: 
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | exitcode: 0
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | exitmsg: OK
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | cpuconsumptiontime: 54260 s
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | nevents: 400
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | neventsw: 0
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | pid: 2614254
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | pgrp: 2614254
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | corecount: 12
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | event service: False
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | sizes: {0: 2397364, 1: 2397563, 6: 2397825, 11: 2397853, 4964: 2424112, 4965: 2433296, 4974: 2433434}
[2025-07-24 05:14:22] 2025-07-24 03:13:49,180 | INFO     | --------------------------------------------------
[2025-07-24 05:14:22] 2025-07-24 03:13:49,181 | INFO     | 
[2025-07-24 05:14:22] 2025-07-24 03:13:49,181 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2025-07-24 05:14:22] 2025-07-24 03:13:49,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 05:14:22] 2025-07-24 03:13:49,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 05:14:22] 2025-07-24 03:13:49,214 | INFO     | job 6741890418 has completed (purged errors)
[2025-07-24 05:14:22] 2025-07-24 03:13:49,214 | INFO     | overall cleanup function is called
[2025-07-24 05:14:22] 2025-07-24 03:13:50,222 | INFO     | --- collectZombieJob: --- 10, [2614254]
[2025-07-24 05:14:22] 2025-07-24 03:13:50,223 | INFO     | zombie collector waiting for pid 2614254
[2025-07-24 05:14:22] 2025-07-24 03:13:50,223 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 05:14:22] 2025-07-24 03:13:50,223 | INFO     | collected zombie processes
[2025-07-24 05:14:22] 2025-07-24 03:13:50,223 | INFO     | will attempt to kill all subprocesses of pid=2614254
[2025-07-24 05:14:22] 2025-07-24 03:13:50,583 | INFO     | process IDs to be killed: [2614254] (in reverse order)
[2025-07-24 05:14:22] 2025-07-24 03:13:50,708 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 05:14:22] 2025-07-24 03:13:50,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 05:14:22] 2025-07-24 03:13:50,723 | INFO     | did not find any defunct processes belonging to 2614254
[2025-07-24 05:14:22] 2025-07-24 03:13:50,735 | INFO     | did not find any defunct processes belonging to 2614254
[2025-07-24 05:14:22] 2025-07-24 03:13:50,736 | INFO     | ready for new job
[2025-07-24 05:14:22] 2025-07-24 03:13:50,736 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 05:14:22] 2025-07-24 03:13:50,737 | INFO     | ***************************************
[2025-07-24 05:14:22] 2025-07-24 03:13:50,737 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 05:14:22] 2025-07-24 03:13:50,737 | INFO     | ***************************************
[2025-07-24 05:14:22] 2025-07-24 03:13:50,737 | INFO     | 
[2025-07-24 05:14:22] 2025-07-24 03:13:50,743 | INFO     | architecture information:
[2025-07-24 05:14:22] 2025-07-24 03:13:50,744 | INFO     | executing command: cat /etc/os-release
[2025-07-24 05:14:22] 2025-07-24 03:13:50,767 | INFO     | cat /etc/os-release:
[2025-07-24 05:14:22] NAME="CentOS Linux"
[2025-07-24 05:14:22] VERSION="7 (Core)"
[2025-07-24 05:14:22] ID="centos"
[2025-07-24 05:14:22] ID_LIKE="rhel fedora"
[2025-07-24 05:14:22] VERSION_ID="7"
[2025-07-24 05:14:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 05:14:22] ANSI_COLOR="0;31"
[2025-07-24 05:14:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 05:14:22] HOME_URL="https://www.centos.org/"
[2025-07-24 05:14:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 05:14:22] 
[2025-07-24 05:14:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 05:14:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 05:14:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 05:14:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 05:14:22] 
[2025-07-24 05:14:22] 2025-07-24 03:13:50,768 | INFO     | ***************************************
[2025-07-24 05:14:22] 2025-07-24 03:13:51,271 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2025-07-24 05:14:22] 2025-07-24 03:13:51,298 | INFO     | sufficient remaining disk space (1679660417024 B)
[2025-07-24 05:14:22] 2025-07-24 03:13:51,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 05:14:22] 2025-07-24 03:13:51,298 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 05:14:22] 2025-07-24 03:13:51,298 | INFO     | update_server=False
[2025-07-24 05:14:22] 2025-07-24 03:13:51,298 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 05:14:22] 2025-07-24 03:13:51,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 05:14:22] 2025-07-24 03:13:51,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 05:14:22] 2025-07-24 03:13:51,508 | INFO     | all payload control threads have been joined
[2025-07-24 05:14:22] 2025-07-24 03:13:51,634 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:14:22] 2025-07-24 03:13:51,634 | INFO     | aborting loop
[2025-07-24 05:14:22] 2025-07-24 03:13:52,062 | INFO     | all job control threads have been joined
[2025-07-24 05:14:22] 2025-07-24 03:13:52,216 | INFO     | all data control threads have been joined
[2025-07-24 05:14:22] 2025-07-24 03:13:52,304 | INFO     | [job] retrieve thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:52,315 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:52,315 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:52,514 | INFO     | [payload] control thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:52,626 | INFO     | [payload] failed_post thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:52,639 | INFO     | [job] job monitor thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:52,769 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:53,068 | INFO     | [job] control thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:53,084 | INFO     | [data] copytool_in thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:53,102 | INFO     | [payload] validate_post thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:53,222 | INFO     | [data] control thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:53,263 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:53,304 | INFO     | [data] copytool_out thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:53,379 | INFO     | [job] validate thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:54,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 05:14:22] 2025-07-24 03:13:55,122 | INFO     | [job] queue monitor thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:55,305 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 05:14:22] 2025-07-24 03:13:57,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136299284288)>', '<ExcThread(monitor, started 140135370839808)>']
[2025-07-24 05:14:22] 2025-07-24 03:14:02,339 | INFO     | all workflow threads have been joined
[2025-07-24 05:14:22] 2025-07-24 03:14:02,340 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 05:14:22] 2025-07-24 03:14:02,340 | INFO     | traces error code: 0
[2025-07-24 05:14:22] 2025-07-24 03:14:02,340 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 05:14:22] 2025-07-24 03:14:21,862 | INFO     | PID=2607137 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-24 05:14:22] 2025-07-24 03:14:21,863 | INFO     | .. there are 11 such processes running
[2025-07-24 05:14:22] 2025-07-24 03:14:21,863 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 05:14:22] 2025-07-24 03:14:21,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 05:14:22] 2025-07-24 03:14:21,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 05:14:22] 2025-07-24 03:14:21,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 05:14:22] 2025-07-24 03:14:21,863 | INFO     | [monitor] control thread has ended
[2025-07-24 05:14:22] 2025-07-24 03:14:22,016 [wrapper] ==== pilot stdout END ====
[2025-07-24 05:14:22] 2025-07-24 03:14:22,020 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 05:14:22] 2025-07-24 03:14:22,024 [wrapper] pilotpid: 2607137
[2025-07-24 05:14:22] 2025-07-24 03:14:22,027 [wrapper] Pilot exit status: 0
[2025-07-24 05:14:22] 2025-07-24 03:14:22,041 [wrapper] pandaids: 6741890418
[2025-07-24 05:14:22] 2025-07-24 03:14:22,123 [wrapper] cleanup supervisor_pilot 2792955 2607138
[2025-07-24 05:14:22] 2025-07-24 03:14:22,127 [wrapper] Test setup, not cleaning
[2025-07-24 05:14:22] 2025-07-24 03:14:22,131 [wrapper] apfmon messages muted
[2025-07-24 05:14:22] 2025-07-24 03:14:22,135 [wrapper] ==== wrapper stdout END ====
[2025-07-24 05:14:22] 2025-07-24 03:14:22,138 [wrapper] ==== wrapper stderr END ====
[2025-07-24 05:14:22]  *** Error codes and diagnostics ***
[2025-07-24 05:14:22]     "exeErrorCode": 0,
[2025-07-24 05:14:22]     "exeErrorDiag": "",
[2025-07-24 05:14:22]     "pilotErrorCode": 0,
[2025-07-24 05:14:22]     "pilotErrorDiag": "",
[2025-07-24 05:14:22]  *** Listing of results directory ***
[2025-07-24 05:14:22] total 600760
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc    530466 Jul 23 10:22 pilot3.tar.gz
[2025-07-24 05:14:22] -rwx------ 1 boinc boinc     36292 Jul 23 10:29 runpilot2-wrapper.sh
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc      5112 Jul 23 10:29 queuedata.json
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc       100 Jul 24 03:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 05:14:22] -rwxr-xr-x 1 boinc boinc      7986 Jul 24 03:50 run_atlas
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc       105 Jul 24 03:50 job.xml
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc      6664 Jul 24 03:50 init_data.xml
[2025-07-24 05:14:22] -rw-r--r-- 2 boinc boinc 332073844 Jul 24 03:50 EVNT.45697470._000206.pool.root.1
[2025-07-24 05:14:22] -rw-r--r-- 2 boinc boinc     15095 Jul 24 03:50 start_atlas.sh
[2025-07-24 05:14:22] drwxrwx--x 2 boinc boinc      4096 Jul 24 03:50 shared
[2025-07-24 05:14:22] -rw-r--r-- 2 boinc boinc    542898 Jul 24 03:50 input.tar.gz
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc         0 Jul 24 03:50 boinc_lockfile
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc      2612 Jul 24 03:50 pandaJob.out
[2025-07-24 05:14:22] -rw------- 1 boinc boinc    979640 Jul 24 03:50 agis_schedconf.cvmfs.json
[2025-07-24 05:14:22] -rw------- 1 boinc boinc   1593041 Jul 24 03:50 agis_ddmendpoints.agis.ALL.json
[2025-07-24 05:14:22] drwx------ 4 boinc boinc      4096 Jul 24 03:50 pilot3
[2025-07-24 05:14:22] -rw------- 1 boinc boinc 277542419 Jul 24 05:12 HITS.45697472._004556.pool.root.1
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc       529 Jul 24 05:13 boinc_task_state.xml
[2025-07-24 05:14:22] -rw------- 1 boinc boinc        95 Jul 24 05:13 pilot_heartbeat.json
[2025-07-24 05:14:22] -rw------- 1 boinc boinc      1020 Jul 24 05:13 memory_monitor_summary.json
[2025-07-24 05:14:22] -rw------- 1 boinc boinc    359585 Jul 24 05:13 log.45697472._004556.job.log.tgz.1
[2025-07-24 05:14:22] -rw------- 1 boinc boinc      7763 Jul 24 05:13 heartbeat.json
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc      8192 Jul 24 05:14 boinc_mmap_file
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc        27 Jul 24 05:14 wrapper_checkpoint.txt
[2025-07-24 05:14:22] -rw------- 1 boinc boinc       823 Jul 24 05:14 pilotlog.txt
[2025-07-24 05:14:22] -rw------- 1 boinc boinc    483923 Jul 24 05:14 log.45697472._004556.job.log.1
[2025-07-24 05:14:22] -rw------- 1 boinc boinc       357 Jul 24 05:14 output.list
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc       620 Jul 24 05:14 runtime_log
[2025-07-24 05:14:22] -rw------- 1 boinc boinc    860160 Jul 24 05:14 result.tar.gz
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc      8721 Jul 24 05:14 runtime_log.err
[2025-07-24 05:14:22] -rw------- 1 boinc boinc       664 Jul 24 05:14 gKkLDmv1jy7n9Rq4apOajLDm4fhM0noT9bVof3QYDmQzvKDmzBDI7n.diag
[2025-07-24 05:14:22] -rw-r--r-- 1 boinc boinc     21772 Jul 24 05:14 stderr.txt
[2025-07-24 05:14:22] HITS file was successfully produced:
[2025-07-24 05:14:22] -rw------- 1 boinc boinc 277542419 Jul 24 05:12 shared/HITS.pool.root.1
[2025-07-24 05:14:22]  *** Contents of shared directory: ***
[2025-07-24 05:14:22] total 596728
[2025-07-24 05:14:22] -rw-r--r-- 2 boinc boinc 332073844 Jul 24 03:50 ATLAS.root_0
[2025-07-24 05:14:22] -rw-r--r-- 2 boinc boinc     15095 Jul 24 03:50 start_atlas.sh
[2025-07-24 05:14:22] -rw-r--r-- 2 boinc boinc    542898 Jul 24 03:50 input.tar.gz
[2025-07-24 05:14:22] -rw------- 1 boinc boinc 277542419 Jul 24 05:12 HITS.pool.root.1
[2025-07-24 05:14:22] -rw------- 1 boinc boinc    860160 Jul 24 05:14 result.tar.gz
05:14:23 (2603152): run_atlas exited; CPU time 54368.190838
05:14:23 (2603152): called boinc_finish(0)

</stderr_txt>
]]>

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