Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:43:57 (1437719): wrapper (7.7.26015): starting
12:43:57 (1437719): wrapper: running run_atlas (--nthreads 12)
[2025-07-23 12:43:57] Arguments: --nthreads 12
[2025-07-23 12:43:57] Threads: 12
[2025-07-23 12:43:57] Checking for CVMFS
[2025-07-23 12:43:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 12:43:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 12:43:58] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 12:43:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 12:43:59] 2.11.5.0 10593 20038 236916 148669 0 695 34601587 45565352 20644 130560 0 159548360 99.750 125758949 26068 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-07-23 12:43:59] CVMFS is ok
[2025-07-23 12:43:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 12:43:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 12:43:59] Further information can be found at the LHC@home message board.
[2025-07-23 12:43:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 12:43:59] Checking for apptainer binary...
[2025-07-23 12:43:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 12:43:59] Running /usr/bin/apptainer --version
[2025-07-23 12:43:59] apptainer version 1.4.1-1.el9
[2025-07-23 12:43:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 12:44:00] wns0067.triumf.lcg
[2025-07-23 12:44:00] apptainer works
[2025-07-23 12:44:00] Set ATHENA_PROC_NUMBER=12
[2025-07-23 12:44:00] Set ATHENA_CORE_NUMBER=12
[2025-07-23 12:44:00] Starting ATLAS job with PandaID=6743232165
[2025-07-23 12:44:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 12:49:05]  *** The last 200 lines of the pilot log: ***
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | WARNING  | wrong length of table data, x=[1753299946.0], y=[1697.0] (must be same and length>=4)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | could have reported an average CPU frequency of 2506 MHz (4 samples)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | ..............................
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . Timing measurements:
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . get job = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . initial setup = 3 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . payload setup = 20 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . stage-in = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . payload execution = 47 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . stage-out = 1 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . log creation = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | ..............................
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743232165/pilotlog.txt
[2025-07-23 12:49:05] 2025-07-23 19:48:31,121 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-07-23 12:49:05] - Log from pilotlog.txt -
[2025-07-23 12:49:05] 2025-07-23 19:48:31,053 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6743232165/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | INFO     | extracted standard info from prmon json
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | WARNING  | wrong length of table data, x=[1753299946.0], y=[1697.0] (must be same and length>=4)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | could have reported an average CPU frequency of 2506 MHz (4 samples)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | ..............................
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . Timing measurements:
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . get job = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . initial setup = 3 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . payload setup = 20 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . stage-in = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . payload execution = 47 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . stage-out = 1 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . log creation = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | ..............................
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743232165/pilotlog.txt
[2025-07-23 12:49:05] 2025-07-23 19:48:31,121 | WARNING  | 
[2025-07-23 12:49:05] [begin log extracts]
[2025-07-23 12:49:05] - Log from pilotlog.txt -
[2025-07-23 12:49:05] 2025-07-23 19:48:31,053 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6743232165/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | INFO     | extracted standard info from prmon json
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 12:49:05] 2025-07-23 19:48:31,054 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | WARNING  | wrong length of table data, x=[1753299946.0], y=[1697.0] (must be same and length>=4)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | could have reported an average CPU frequency of 2506 MHz (4 samples)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | ..............................
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . Timing measurements:
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . get job = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . initial setup = 3 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . payload setup = 20 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,055 | INFO     | . stage-in = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . payload execution = 47 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . stage-out = 1 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | . log creation = 0 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | ..............................
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-07-23 12:49:05] 2025-07-23 19:48:31,075 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6743232165/pilotlog.txt
[2025-07-23 12:49:05] [end log extracts]
[2025-07-23 12:49:05] 2025-07-23 19:48:31,121 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,122 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-07-23 12:49:05] 2025-07-23 19:48:31,810 | INFO     | 
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | job summary report
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | --------------------------------------------------
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | PanDA job id: 6743232165
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | task id: 45668889
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-07-23 12:46:07,664 CRITICAL Transform executor raised TransformValidationExceptio
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | pilot state: failed 
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | transexitcode: 65
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | exeerrorcode: 65
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | exitcode: 65
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | cpuconsumptiontime: 17 s
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | nevents: 0
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | neventsw: 0
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | pid: 1447768
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | pgrp: 1447768
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | corecount: 12
[2025-07-23 12:49:05] 2025-07-23 19:48:31,811 | INFO     | event service: False
[2025-07-23 12:49:05] 2025-07-23 19:48:31,812 | INFO     | sizes: {0: 2397244, 1: 2397443, 12: 2397733, 22: 2397733, 71: 2420929, 72: 2420905, 75: 2425353, 76: 2425381, 205: 2425575}
[2025-07-23 12:49:05] 2025-07-23 19:48:31,812 | INFO     | --------------------------------------------------
[2025-07-23 12:49:05] 2025-07-23 19:48:31,812 | INFO     | 
[2025-07-23 12:49:05] 2025-07-23 19:48:31,812 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-07-23 12:49:05] 2025-07-23 19:48:32,080 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,081 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 12:49:05] 2025-07-23 19:48:32,082 | INFO     | job 6743232165 has completed (purged errors)
[2025-07-23 12:49:05] 2025-07-23 19:48:32,082 | INFO     | overall cleanup function is called
[2025-07-23 12:49:05] 2025-07-23 19:48:33,093 | INFO     | --- collectZombieJob: --- 10, [1447768]
[2025-07-23 12:49:05] 2025-07-23 19:48:33,093 | INFO     | zombie collector waiting for pid 1447768
[2025-07-23 12:49:05] 2025-07-23 19:48:33,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 12:49:05] 2025-07-23 19:48:33,093 | INFO     | collected zombie processes
[2025-07-23 12:49:05] 2025-07-23 19:48:33,093 | INFO     | will attempt to kill all subprocesses of pid=1447768
[2025-07-23 12:49:05] 2025-07-23 19:48:33,529 | INFO     | process IDs to be killed: [1447768] (in reverse order)
[2025-07-23 12:49:05] 2025-07-23 19:48:34,078 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 12:49:05] 2025-07-23 19:48:34,078 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 12:49:05] 2025-07-23 19:48:34,106 | INFO     | did not find any defunct processes belonging to 1447768
[2025-07-23 12:49:05] 2025-07-23 19:48:34,144 | INFO     | did not find any defunct processes belonging to 1447768
[2025-07-23 12:49:05] 2025-07-23 19:48:34,145 | INFO     | ready for new job
[2025-07-23 12:49:05] 2025-07-23 19:48:34,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 12:49:05] 2025-07-23 19:48:34,146 | INFO     | ***************************************
[2025-07-23 12:49:05] 2025-07-23 19:48:34,146 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 12:49:05] 2025-07-23 19:48:34,146 | INFO     | ***************************************
[2025-07-23 12:49:05] 2025-07-23 19:48:34,146 | INFO     | 
[2025-07-23 12:49:05] 2025-07-23 19:48:34,163 | INFO     | architecture information:
[2025-07-23 12:49:05] 2025-07-23 19:48:34,183 | INFO     | executing command: cat /etc/os-release
[2025-07-23 12:49:05] 2025-07-23 19:48:34,293 | INFO     | cat /etc/os-release:
[2025-07-23 12:49:05] NAME="CentOS Linux"
[2025-07-23 12:49:05] VERSION="7 (Core)"
[2025-07-23 12:49:05] ID="centos"
[2025-07-23 12:49:05] ID_LIKE="rhel fedora"
[2025-07-23 12:49:05] VERSION_ID="7"
[2025-07-23 12:49:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 12:49:05] ANSI_COLOR="0;31"
[2025-07-23 12:49:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 12:49:05] HOME_URL="https://www.centos.org/"
[2025-07-23 12:49:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 12:49:05] 
[2025-07-23 12:49:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 12:49:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 12:49:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 12:49:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 12:49:05] 
[2025-07-23 12:49:05] 2025-07-23 19:48:34,293 | INFO     | ***************************************
[2025-07-23 12:49:05] 2025-07-23 19:48:34,796 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-07-23 12:49:05] 2025-07-23 19:48:34,876 | INFO     | sufficient remaining disk space (1743411740672 B)
[2025-07-23 12:49:05] 2025-07-23 19:48:34,876 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 12:49:05] 2025-07-23 19:48:34,876 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 12:49:05] 2025-07-23 19:48:34,876 | INFO     | update_server=False
[2025-07-23 12:49:05] 2025-07-23 19:48:34,877 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 12:49:05] 2025-07-23 19:48:34,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 12:49:05] 2025-07-23 19:48:34,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 12:49:05] 2025-07-23 19:48:35,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:49:05] 2025-07-23 19:48:35,392 | INFO     | aborting loop
[2025-07-23 12:49:05] 2025-07-23 19:48:35,529 | INFO     | all job control threads have been joined
[2025-07-23 12:49:05] 2025-07-23 19:48:35,623 | INFO     | all data control threads have been joined
[2025-07-23 12:49:05] 2025-07-23 19:48:35,883 | INFO     | [job] retrieve thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:35,951 | INFO     | [job] validate thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:35,990 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,001 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,027 | INFO     | [payload] failed_post thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,073 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,215 | INFO     | all payload control threads have been joined
[2025-07-23 12:49:05] 2025-07-23 19:48:36,409 | INFO     | [job] job monitor thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 12:49:05] 2025-07-23 19:48:36,541 | INFO     | [job] control thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,580 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,630 | INFO     | [data] control thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,861 | INFO     | [data] copytool_in thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:36,884 | INFO     | [data] copytool_out thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:37,221 | INFO     | [payload] control thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:37,288 | INFO     | [payload] validate_post thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:37,516 | INFO     | [job] queue monitor thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:38,910 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 12:49:05] 2025-07-23 19:48:39,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687110797120)>', '<ExcThread(monitor, started 140686712088320)>']
[2025-07-23 12:49:05] 2025-07-23 19:48:44,889 | INFO     | all workflow threads have been joined
[2025-07-23 12:49:05] 2025-07-23 19:48:44,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 12:49:05] 2025-07-23 19:48:44,889 | INFO     | traces error code: 0
[2025-07-23 12:49:05] 2025-07-23 19:48:44,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 12:49:05] 2025-07-23 19:49:04,915 | INFO     | PID=1441411 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 12:49:05] 2025-07-23 19:49:04,916 | INFO     | .. there are 28 such processes running
[2025-07-23 12:49:05] 2025-07-23 19:49:04,916 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 12:49:05] 2025-07-23 19:49:04,916 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 12:49:05] 2025-07-23 19:49:04,916 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 12:49:05] 2025-07-23 19:49:04,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 12:49:05] 2025-07-23 19:49:04,917 | INFO     | [monitor] control thread has ended
[2025-07-23 12:49:05] 2025-07-23 19:49:05,055 [wrapper] ==== pilot stdout END ====
[2025-07-23 12:49:05] 2025-07-23 19:49:05,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 12:49:05] 2025-07-23 19:49:05,060 [wrapper] pilotpid: 1441411
[2025-07-23 12:49:05] 2025-07-23 19:49:05,062 [wrapper] Pilot exit status: 0
[2025-07-23 12:49:05] 2025-07-23 19:49:05,084 [wrapper] pandaids: 6743232165
[2025-07-23 12:49:05] 2025-07-23 19:49:05,128 [wrapper] cleanup supervisor_pilot 1441418 1441412
[2025-07-23 12:49:05] 2025-07-23 19:49:05,131 [wrapper] Test setup, not cleaning
[2025-07-23 12:49:05] 2025-07-23 19:49:05,143 [wrapper] apfmon messages muted
[2025-07-23 12:49:05] 2025-07-23 19:49:05,162 [wrapper] ==== wrapper stdout END ====
[2025-07-23 12:49:05] 2025-07-23 19:49:05,175 [wrapper] ==== wrapper stderr END ====
[2025-07-23 12:49:05]  *** Error codes and diagnostics ***
[2025-07-23 12:49:05]     "exeErrorCode": 65,
[2025-07-23 12:49:05]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 12:49:05]     "pilotErrorCode": 1305,
[2025-07-23 12:49:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-07-23 12:49:05]  *** Listing of results directory ***
[2025-07-23 12:49:05] total 302292
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc    530466 Jul 23 09:27 pilot3.tar.gz
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc      5112 Jul 23 09:31 queuedata.json
[2025-07-23 12:49:05] -rwx------. 1 boinc boinc     36292 Jul 23 09:31 runpilot2-wrapper.sh
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc       100 Jul 23 12:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 12:49:05] -rwxr-xr-x. 1 boinc boinc      7986 Jul 23 12:43 run_atlas
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc       105 Jul 23 12:43 job.xml
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc      6596 Jul 23 12:43 init_data.xml
[2025-07-23 12:49:05] -rw-r--r--. 2 boinc boinc 305465229 Jul 23 12:43 EVNT.45668886._000036.pool.root.1
[2025-07-23 12:49:05] -rw-r--r--. 2 boinc boinc     15095 Jul 23 12:43 start_atlas.sh
[2025-07-23 12:49:05] drwxrwx--x. 2 boinc boinc      4096 Jul 23 12:43 shared
[2025-07-23 12:49:05] -rw-r--r--. 2 boinc boinc    542879 Jul 23 12:43 input.tar.gz
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc         0 Jul 23 12:43 boinc_lockfile
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc      2537 Jul 23 12:44 pandaJob.out
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc    979640 Jul 23 12:44 agis_schedconf.cvmfs.json
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc   1593041 Jul 23 12:44 agis_ddmendpoints.agis.ALL.json
[2025-07-23 12:49:05] drwx------. 4 boinc boinc      4096 Jul 23 12:44 pilot3
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc       524 Jul 23 12:46 boinc_task_state.xml
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc       955 Jul 23 12:46 memory_monitor_summary.json
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc     21336 Jul 23 12:46 log.45668889._000934.job.log.tgz.1
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc        95 Jul 23 12:48 pilot_heartbeat.json
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc      8393 Jul 23 12:48 heartbeat.json
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc      8192 Jul 23 12:49 boinc_mmap_file
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc       823 Jul 23 12:49 pilotlog.txt
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc     80093 Jul 23 12:49 log.45668889._000934.job.log.1
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc       188 Jul 23 12:49 output.list
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc        22 Jul 23 12:49 wrapper_checkpoint.txt
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc       620 Jul 23 12:49 runtime_log
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc    122880 Jul 23 12:49 result.tar.gz
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc      8485 Jul 23 12:49 runtime_log.err
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc       645 Jul 23 12:49 nx4MDmaYry7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuTwKDmnKXgym.diag
[2025-07-23 12:49:05] -rw-r--r--. 1 boinc boinc     21818 Jul 23 12:49 stderr.txt
[2025-07-23 12:49:05] No HITS result produced
[2025-07-23 12:49:05]  *** Contents of shared directory: ***
[2025-07-23 12:49:05] total 298980
[2025-07-23 12:49:05] -rw-r--r--. 2 boinc boinc 305465229 Jul 23 12:43 ATLAS.root_0
[2025-07-23 12:49:05] -rw-r--r--. 2 boinc boinc     15095 Jul 23 12:43 start_atlas.sh
[2025-07-23 12:49:05] -rw-r--r--. 2 boinc boinc    542879 Jul 23 12:43 input.tar.gz
[2025-07-23 12:49:05] -rw-------. 1 boinc boinc    122880 Jul 23 12:49 result.tar.gz
12:49:07 (1437719): run_atlas exited; CPU time 26.420060
12:49:07 (1437719): called boinc_finish(0)

</stderr_txt>
]]>

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