Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:54 (40814): wrapper (7.7.26015): starting
02:09:54 (40814): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 02:09:54] Arguments: --nthreads 4
[2025-07-25 02:09:54] Threads: 4
[2025-07-25 02:09:54] Checking for CVMFS
[2025-07-25 02:09:54] No cvmfs_config command found, will try listing directly
[2025-07-25 02:09:54] CVMFS is ok
[2025-07-25 02:09:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 02:09:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 02:09:54] Further information can be found at the LHC@home message board.
[2025-07-25 02:09:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 02:09:54] Checking for apptainer binary...
[2025-07-25 02:09:54] which: no apptainer in ((null))
[2025-07-25 02:09:54] apptainer is not installed, using version from CVMFS
[2025-07-25 02:09:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 02:09:54] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-07-25 02:09:54] apptainer works
[2025-07-25 02:09:54] Set ATHENA_PROC_NUMBER=4
[2025-07-25 02:09:54] Set ATHENA_CORE_NUMBER=4
[2025-07-25 02:09:54] Starting ATLAS job with PandaID=6743436851
[2025-07-25 02:09:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:46:27 (88995): wrapper (7.7.26015): starting
02:46:27 (88995): wrapper: running run_atlas (--nthreads 4)
[2025-07-25 02:46:27] Arguments: --nthreads 4
[2025-07-25 02:46:27] Threads: 4
[2025-07-25 02:46:27] This job has been restarted, cleaning up previous attempt
[2025-07-25 02:46:27] Checking for CVMFS
[2025-07-25 02:46:27] No cvmfs_config command found, will try listing directly
[2025-07-25 02:46:27] CVMFS is ok
[2025-07-25 02:46:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-25 02:46:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-25 02:46:27] Further information can be found at the LHC@home message board.
[2025-07-25 02:46:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-25 02:46:27] Checking for apptainer binary...
[2025-07-25 02:46:27] which: no apptainer in ((null))
[2025-07-25 02:46:27] apptainer is not installed, using version from CVMFS
[2025-07-25 02:46:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-25 02:46:28] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot12/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-07-25 02:46:28] apptainer works
[2025-07-25 02:46:28] Set ATHENA_PROC_NUMBER=4
[2025-07-25 02:46:28] Set ATHENA_CORE_NUMBER=4
[2025-07-25 02:46:28] Starting ATLAS job with PandaID=6743436851
[2025-07-25 02:46:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot12/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-25 08:25:59]  *** The last 200 lines of the pilot log: ***
[2025-07-25 08:25:59] 2025-07-25 06:25:25,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-25 08:25:59] 2025-07-25 06:25:25,858 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-25 08:25:59] 2025-07-25 06:25:25,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-25 08:25:59] 2025-07-25 06:25:25,866 | INFO     | fitting pss+swap vs Time
[2025-07-25 08:25:59] 2025-07-25 06:25:25,867 | INFO     | sum of square deviations: 11450045382.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,870 | INFO     | sum of deviations: -38944891057.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,870 | INFO     | mean x: 1753414550.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,871 | INFO     | mean y: 2381251.975975976
[2025-07-25 08:25:59] 2025-07-25 06:25:25,871 | INFO     | -- intersect: 5966247450.695003
[2025-07-25 08:25:59] 2025-07-25 06:25:25,871 | INFO     | intersect: 5966247450.695003
[2025-07-25 08:25:59] 2025-07-25 06:25:25,871 | INFO     | chi2: 2.3355274947420583
[2025-07-25 08:25:59] 2025-07-25 06:25:25,872 | INFO     | sum of square deviations: 10941980042.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,876 | INFO     | sum of deviations: -19011403533.000008
[2025-07-25 08:25:59] 2025-07-25 06:25:25,876 | INFO     | mean x: 1753414397.5
[2025-07-25 08:25:59] 2025-07-25 06:25:25,876 | INFO     | mean y: 2387164.1707317075
[2025-07-25 08:25:59] 2025-07-25 06:25:25,876 | INFO     | -- intersect: 3048898722.726961
[2025-07-25 08:25:59] 2025-07-25 06:25:25,876 | INFO     | intersect: 3048898722.726961
[2025-07-25 08:25:59] 2025-07-25 06:25:25,877 | INFO     | chi2: 1.676772417543781
[2025-07-25 08:25:59] 2025-07-25 06:25:25,877 | INFO     | current chi2=1.676772417543781 (change=28.205836954663294 %)
[2025-07-25 08:25:59] 2025-07-25 06:25:25,878 | INFO     | sum of square deviations: 10449170802.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,882 | INFO     | sum of deviations: -18877005100.00002
[2025-07-25 08:25:59] 2025-07-25 06:25:25,882 | INFO     | mean x: 1753414245.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,882 | INFO     | mean y: 2387205.693498452
[2025-07-25 08:25:59] 2025-07-25 06:25:25,882 | INFO     | -- intersect: 3170027037.836199
[2025-07-25 08:25:59] 2025-07-25 06:25:25,882 | INFO     | intersect: 3170027037.836199
[2025-07-25 08:25:59] 2025-07-25 06:25:25,883 | INFO     | chi2: 1.6759757198565772
[2025-07-25 08:25:59] 2025-07-25 06:25:25,883 | INFO     | current chi2=1.6759757198565772 (change=0.04751376387565158 %)
[2025-07-25 08:25:59] 2025-07-25 06:25:25,883 | INFO     | right removable region: 322
[2025-07-25 08:25:59] 2025-07-25 06:25:25,884 | INFO     | sum of square deviations: 10941980042.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,888 | INFO     | sum of deviations: -76996989713.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,888 | INFO     | mean x: 1753414702.5
[2025-07-25 08:25:59] 2025-07-25 06:25:25,888 | INFO     | mean y: 2392561.81097561
[2025-07-25 08:25:59] 2025-07-25 06:25:25,889 | INFO     | -- intersect: 12340895583.457727
[2025-07-25 08:25:59] 2025-07-25 06:25:25,889 | INFO     | intersect: 12340895583.457727
[2025-07-25 08:25:59] 2025-07-25 06:25:25,889 | INFO     | chi2: 1.0477825335509867
[2025-07-25 08:25:59] 2025-07-25 06:25:25,890 | INFO     | current chi2=1.0477825335509867 (change=55.13722120977614 %)
[2025-07-25 08:25:59] 2025-07-25 06:25:25,890 | INFO     | sum of square deviations: 10449170802.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,894 | INFO     | sum of deviations: -66236682616.000015
[2025-07-25 08:25:59] 2025-07-25 06:25:25,894 | INFO     | mean x: 1753414855.0
[2025-07-25 08:25:59] 2025-07-25 06:25:25,894 | INFO     | mean y: 2389224.3931888547
[2025-07-25 08:25:59] 2025-07-25 06:25:25,894 | INFO     | -- intersect: 11117183445.44134
[2025-07-25 08:25:59] 2025-07-25 06:25:25,894 | INFO     | intersect: 11117183445.44134
[2025-07-25 08:25:59] 2025-07-25 06:25:25,895 | INFO     | chi2: 1.0250019412085791
[2025-07-25 08:25:59] 2025-07-25 06:25:25,895 | INFO     | current chi2=1.0250019412085791 (change=2.174171797386528 %)
[2025-07-25 08:25:59] 2025-07-25 06:25:25,895 | INFO     | left removable region: 20
[2025-07-25 08:25:59] 2025-07-25 06:25:25,896 | INFO     | sum of square deviations: 8540720135.5
[2025-07-25 08:25:59] 2025-07-25 06:25:25,899 | INFO     | sum of deviations: -14392306541.499998
[2025-07-25 08:25:59] 2025-07-25 06:25:25,899 | INFO     | mean x: 1753414824.5
[2025-07-25 08:25:59] 2025-07-25 06:25:25,899 | INFO     | mean y: 2384704.2218543044
[2025-07-25 08:25:59] 2025-07-25 06:25:25,899 | INFO     | -- intersect: 2957133630.3365073
[2025-07-25 08:25:59] 2025-07-25 06:25:25,899 | INFO     | intersect: 2957133630.3365073
[2025-07-25 08:25:59] 2025-07-25 06:25:25,900 | INFO     | chi2: 0.2013775749134917
[2025-07-25 08:25:59] 2025-07-25 06:25:25,900 | INFO     | -- intersect: 2957133630.3365073
[2025-07-25 08:25:59] 2025-07-25 06:25:25,900 | INFO     | current memory leak: -1.69 B/s (using 302 data points, chi2=0.20)
[2025-07-25 08:25:59] 2025-07-25 06:25:25,901 | INFO     | could have reported an average CPU frequency of 2440 MHz (15 samples)
[2025-07-25 08:25:59] 2025-07-25 06:25:25,901 | INFO     | ..............................
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . Timing measurements:
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . get job = 0 s
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . initial setup = 1 s
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . payload setup = 7 s
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . stage-in = 0 s
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . payload execution = 20292 s
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . stage-out = 1 s
[2025-07-25 08:25:59] 2025-07-25 06:25:25,902 | INFO     | . log creation = 0 s
[2025-07-25 08:25:59] 2025-07-25 06:25:25,903 | INFO     | ..............................
[2025-07-25 08:25:59] 2025-07-25 06:25:26,032 | INFO     | 
[2025-07-25 08:25:59] 2025-07-25 06:25:26,032 | INFO     | job summary report
[2025-07-25 08:25:59] 2025-07-25 06:25:26,032 | INFO     | --------------------------------------------------
[2025-07-25 08:25:59] 2025-07-25 06:25:26,032 | INFO     | PanDA job id: 6743436851
[2025-07-25 08:25:59] 2025-07-25 06:25:26,032 | INFO     | task id: 45697532
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | errors: (none)
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | pilot state: finished 
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | transexitcode: 0
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | exeerrorcode: 0
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | exeerrordiag: 
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | exitcode: 0
[2025-07-25 08:25:59] 2025-07-25 06:25:26,033 | INFO     | exitmsg: OK
[2025-07-25 08:25:59] 2025-07-25 06:25:26,034 | INFO     | cpuconsumptiontime: 78060 s
[2025-07-25 08:25:59] 2025-07-25 06:25:26,034 | INFO     | nevents: 400
[2025-07-25 08:25:59] 2025-07-25 06:25:26,034 | INFO     | neventsw: 0
[2025-07-25 08:25:59] 2025-07-25 06:25:26,034 | INFO     | pid: 99400
[2025-07-25 08:25:59] 2025-07-25 06:25:26,034 | INFO     | pgrp: 99400
[2025-07-25 08:25:59] 2025-07-25 06:25:26,034 | INFO     | corecount: 4
[2025-07-25 08:25:59] 2025-07-25 06:25:26,034 | INFO     | event service: False
[2025-07-25 08:25:59] 2025-07-25 06:25:26,035 | INFO     | sizes: {0: 2397336, 1: 2397535, 5: 2397797, 12: 2397853, 20302: 2431186, 20303: 2431185, 20305: 2440445, 20313: 2440583}
[2025-07-25 08:25:59] 2025-07-25 06:25:26,035 | INFO     | --------------------------------------------------
[2025-07-25 08:25:59] 2025-07-25 06:25:26,035 | INFO     | 
[2025-07-25 08:25:59] 2025-07-25 06:25:26,035 | INFO     | executing command: ls -lF /scratch/boinc/var/slot12/slots/0
[2025-07-25 08:25:59] 2025-07-25 06:25:26,057 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,058 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,058 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,058 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,058 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,058 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,058 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,058 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,059 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,059 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,059 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,059 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,059 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,059 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,059 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,060 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,060 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,060 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-25 08:25:59] 2025-07-25 06:25:26,060 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,060 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-25 08:25:59] 2025-07-25 06:25:26,060 | INFO     | job 6743436851 has completed (purged errors)
[2025-07-25 08:25:59] 2025-07-25 06:25:26,061 | INFO     | overall cleanup function is called
[2025-07-25 08:25:59] 2025-07-25 06:25:27,068 | INFO     | --- collectZombieJob: --- 10, [99400]
[2025-07-25 08:25:59] 2025-07-25 06:25:27,069 | INFO     | zombie collector waiting for pid 99400
[2025-07-25 08:25:59] 2025-07-25 06:25:27,069 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-25 08:25:59] 2025-07-25 06:25:27,069 | INFO     | collected zombie processes
[2025-07-25 08:25:59] 2025-07-25 06:25:27,069 | INFO     | will attempt to kill all subprocesses of pid=99400
[2025-07-25 08:25:59] 2025-07-25 06:25:27,380 | INFO     | process IDs to be killed: [99400] (in reverse order)
[2025-07-25 08:25:59] 2025-07-25 06:25:27,473 | WARNING  | found no corresponding commands to process id(s)
[2025-07-25 08:25:59] 2025-07-25 06:25:27,474 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-25 08:25:59] 2025-07-25 06:25:27,482 | INFO     | did not find any defunct processes belonging to 99400
[2025-07-25 08:25:59] 2025-07-25 06:25:27,489 | INFO     | did not find any defunct processes belonging to 99400
[2025-07-25 08:25:59] 2025-07-25 06:25:27,489 | INFO     | ready for new job
[2025-07-25 08:25:59] 2025-07-25 06:25:27,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-25 08:25:59] 2025-07-25 06:25:27,492 | INFO     | ***************************************
[2025-07-25 08:25:59] 2025-07-25 06:25:27,492 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-25 08:25:59] 2025-07-25 06:25:27,492 | INFO     | ***************************************
[2025-07-25 08:25:59] 2025-07-25 06:25:27,492 | INFO     | 
[2025-07-25 08:25:59] 2025-07-25 06:25:27,495 | INFO     | architecture information:
[2025-07-25 08:25:59] 2025-07-25 06:25:27,495 | INFO     | executing command: cat /etc/os-release
[2025-07-25 08:25:59] 2025-07-25 06:25:27,509 | INFO     | cat /etc/os-release:
[2025-07-25 08:25:59] NAME="CentOS Linux"
[2025-07-25 08:25:59] VERSION="7 (Core)"
[2025-07-25 08:25:59] ID="centos"
[2025-07-25 08:25:59] ID_LIKE="rhel fedora"
[2025-07-25 08:25:59] VERSION_ID="7"
[2025-07-25 08:25:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-25 08:25:59] ANSI_COLOR="0;31"
[2025-07-25 08:25:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-25 08:25:59] HOME_URL="https://www.centos.org/"
[2025-07-25 08:25:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-25 08:25:59] 
[2025-07-25 08:25:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-25 08:25:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-25 08:25:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-25 08:25:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-25 08:25:59] 
[2025-07-25 08:25:59] 2025-07-25 06:25:27,510 | INFO     | ***************************************
[2025-07-25 08:25:59] 2025-07-25 06:25:28,013 | INFO     | executing command: df -mP /scratch/boinc/var/slot12/slots/0
[2025-07-25 08:25:59] 2025-07-25 06:25:28,028 | INFO     | sufficient remaining disk space (1649834721280 B)
[2025-07-25 08:25:59] 2025-07-25 06:25:28,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-25 08:25:59] 2025-07-25 06:25:28,028 | INFO     | current server update state: UPDATING_FINAL
[2025-07-25 08:25:59] 2025-07-25 06:25:28,029 | INFO     | update_server=False
[2025-07-25 08:25:59] 2025-07-25 06:25:28,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-25 08:25:59] 2025-07-25 06:25:28,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-25 08:25:59] 2025-07-25 06:25:28,089 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-25 08:25:59] 2025-07-25 06:25:28,089 | INFO     | aborting loop
[2025-07-25 08:25:59] 2025-07-25 06:25:28,098 | INFO     | all job control threads have been joined
[2025-07-25 08:25:59] 2025-07-25 06:25:28,563 | INFO     | all data control threads have been joined
[2025-07-25 08:25:59] 2025-07-25 06:25:28,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-25 08:25:59] 2025-07-25 06:25:29,032 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-25 08:25:59] 2025-07-25 06:25:29,034 | INFO     | [job] retrieve thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:29,035 | INFO     | [job] queue monitor thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:29,094 | INFO     | [job] job monitor thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:29,103 | INFO     | [job] control thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:29,402 | INFO     | all payload control threads have been joined
[2025-07-25 08:25:59] 2025-07-25 06:25:29,447 | INFO     | [payload] validate_post thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:29,500 | INFO     | [job] create_data_payload thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:29,568 | INFO     | [data] control thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:29,763 | INFO     | [payload] validate_pre thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:30,009 | INFO     | [payload] execute_payloads thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:30,052 | INFO     | [payload] failed_post thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:30,253 | INFO     | [data] copytool_in thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:30,270 | INFO     | [job] validate thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:30,407 | INFO     | [payload] control thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:30,920 | INFO     | [data] copytool_out thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:33,037 | INFO     | [data] queue_monitor thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:38,080 | INFO     | job.realtimelogging is not enabled
[2025-07-25 08:25:59] 2025-07-25 06:25:39,085 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-25 08:25:59] 2025-07-25 06:25:40,293 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23135828535104)>', '<ExcThread(monitor, started 23135592081152)>']
[2025-07-25 08:25:59] 2025-07-25 06:25:45,318 | INFO     | all workflow threads have been joined
[2025-07-25 08:25:59] 2025-07-25 06:25:45,319 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-25 08:25:59] 2025-07-25 06:25:45,319 | INFO     | traces error code: 0
[2025-07-25 08:25:59] 2025-07-25 06:25:45,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-25 08:25:59] 2025-07-25 06:25:58,850 | INFO     | PID=92573 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-07-25 08:25:59] 2025-07-25 06:25:58,850 | INFO     | .. there are 8 such processes running
[2025-07-25 08:25:59] 2025-07-25 06:25:58,851 | INFO     | found 0 job(s) in 20 queues
[2025-07-25 08:25:59] 2025-07-25 06:25:58,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-25 08:25:59] 2025-07-25 06:25:58,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-25 08:25:59] 2025-07-25 06:25:58,852 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-25 08:25:59] 2025-07-25 06:25:58,852 | INFO     | [monitor] control thread has ended
[2025-07-25 08:25:59] 2025-07-25 06:25:58,996 [wrapper] ==== pilot stdout END ====
[2025-07-25 08:25:59] 2025-07-25 06:25:58,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-25 08:25:59] 2025-07-25 06:25:59,000 [wrapper] pilotpid: 92573
[2025-07-25 08:25:59] 2025-07-25 06:25:59,003 [wrapper] Pilot exit status: 0
[2025-07-25 08:25:59] 2025-07-25 06:25:59,013 [wrapper] pandaids: 6743436851 6743436851
[2025-07-25 08:25:59] 2025-07-25 06:25:59,062 [wrapper] cleanup supervisor_pilot  597990 92574
[2025-07-25 08:25:59] 2025-07-25 06:25:59,065 [wrapper] Test setup, not cleaning
[2025-07-25 08:25:59] 2025-07-25 06:25:59,068 [wrapper] apfmon messages muted
[2025-07-25 08:25:59] 2025-07-25 06:25:59,071 [wrapper] ==== wrapper stdout END ====
[2025-07-25 08:25:59] 2025-07-25 06:25:59,073 [wrapper] ==== wrapper stderr END ====
[2025-07-25 08:25:59]  *** Error codes and diagnostics ***
[2025-07-25 08:25:59]     "exeErrorCode": 0,
[2025-07-25 08:25:59]     "exeErrorDiag": "",
[2025-07-25 08:25:59]     "pilotErrorCode": 0,
[2025-07-25 08:25:59]     "pilotErrorDiag": "",
[2025-07-25 08:25:59]  *** Listing of results directory ***
[2025-07-25 08:25:59] total 924000
[2025-07-25 08:25:59] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc    530466 Jul 23 14:25 pilot3.tar.gz
[2025-07-25 08:25:59] -rwx------ 1 boinc boinc     36292 Jul 23 14:30 runpilot2-wrapper.sh
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc      5112 Jul 23 14:30 queuedata.json
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc       100 Jul 25 01:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-25 08:25:59] -rwxr-xr-x 1 boinc boinc      7986 Jul 25 01:40 run_atlas
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc       105 Jul 25 01:40 job.xml
[2025-07-25 08:25:59] -rw-r--r-- 3 boinc boinc 330839749 Jul 25 02:09 EVNT.45697530._000205.pool.root.1
[2025-07-25 08:25:59] -rw-r--r-- 3 boinc boinc 330839749 Jul 25 02:09 ATLAS.root_0
[2025-07-25 08:25:59] -rw-r--r-- 2 boinc boinc    542904 Jul 25 02:09 input.tar.gz
[2025-07-25 08:25:59] drwxrwx--x 2 boinc boinc      4096 Jul 25 02:09 shared
[2025-07-25 08:25:59] -rw-r--r-- 2 boinc boinc     15095 Jul 25 02:09 start_atlas.sh
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc         0 Jul 25 02:09 boinc_lockfile
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc      6421 Jul 25 02:46 init_data.xml
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc      2613 Jul 25 02:46 pandaJob.out
[2025-07-25 08:25:59] -rw------- 1 boinc boinc    979709 Jul 25 02:46 agis_schedconf.cvmfs.json
[2025-07-25 08:25:59] -rw------- 1 boinc boinc 276102023 Jul 25 08:24 HITS.45697532._005759.pool.root.1
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc       531 Jul 25 08:24 boinc_task_state.xml
[2025-07-25 08:25:59] -rw------- 1 boinc boinc      1051 Jul 25 08:25 memory_monitor_summary.json
[2025-07-25 08:25:59] -rw------- 1 boinc boinc   1593052 Jul 25 08:25 agis_ddmendpoints.agis.ALL.json
[2025-07-25 08:25:59] -rw------- 1 boinc boinc    386920 Jul 25 08:25 log.45697532._005759.job.log.tgz.1
[2025-07-25 08:25:59] -rw------- 1 boinc boinc      7827 Jul 25 08:25 heartbeat.json
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc      8192 Jul 25 08:25 boinc_mmap_file
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc        28 Jul 25 08:25 wrapper_checkpoint.txt
[2025-07-25 08:25:59] -rw------- 1 boinc boinc        97 Jul 25 08:25 pilot_heartbeat.json
[2025-07-25 08:25:59] -rw------- 1 boinc boinc       820 Jul 25 08:25 pilotlog.txt
[2025-07-25 08:25:59] -rw------- 1 boinc boinc   1869461 Jul 25 08:25 log.45697532._005759.job.log.1
[2025-07-25 08:25:59] -rw------- 1 boinc boinc       357 Jul 25 08:25 output.list
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc       620 Jul 25 08:25 runtime_log
[2025-07-25 08:25:59] -rw------- 1 boinc boinc   2273280 Jul 25 08:25 result.tar.gz
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc      9104 Jul 25 08:25 runtime_log.err
[2025-07-25 08:25:59] -rw------- 1 boinc boinc       791 Jul 25 08:25 jBUNDmsmny7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3aLLDmNw9Ejn.diag
[2025-07-25 08:25:59] -rw-r--r-- 1 boinc boinc     22570 Jul 25 08:25 stderr.txt
[2025-07-25 08:25:59] HITS file was successfully produced:
[2025-07-25 08:25:59] -rw------- 1 boinc boinc 276102023 Jul 25 08:24 shared/HITS.pool.root.1
[2025-07-25 08:25:59]  *** Contents of shared directory: ***
[2025-07-25 08:25:59] total 595496
[2025-07-25 08:25:59] -rw-r--r-- 3 boinc boinc 330839749 Jul 25 02:09 ATLAS.root_0
[2025-07-25 08:25:59] -rw-r--r-- 2 boinc boinc    542904 Jul 25 02:09 input.tar.gz
[2025-07-25 08:25:59] -rw-r--r-- 2 boinc boinc     15095 Jul 25 02:09 start_atlas.sh
[2025-07-25 08:25:59] -rw------- 1 boinc boinc 276102023 Jul 25 08:24 HITS.pool.root.1
[2025-07-25 08:25:59] -rw------- 1 boinc boinc   2273280 Jul 25 08:25 result.tar.gz
08:26:00 (88995): run_atlas exited; CPU time 78821.361147
08:26:00 (88995): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN