Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:31 (1214364): wrapper (7.7.26015): starting
03:10:31 (1214364): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 03:10:31] Arguments: --nthreads 4
[2025-07-26 03:10:31] Threads: 4
[2025-07-26 03:10:31] Checking for CVMFS
[2025-07-26 03:10:31] No cvmfs_config command found, will try listing directly
[2025-07-26 03:10:31] CVMFS is ok
[2025-07-26 03:10:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 03:10:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 03:10:32] Further information can be found at the LHC@home message board.
[2025-07-26 03:10:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 03:10:32] Checking for apptainer binary...
[2025-07-26 03:10:32] which: no apptainer in ((null))
[2025-07-26 03:10:32] apptainer is not installed, using version from CVMFS
[2025-07-26 03:10:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 03:10:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-07-26 03:10:32] apptainer works
[2025-07-26 03:10:32] Set ATHENA_PROC_NUMBER=4
[2025-07-26 03:10:32] Set ATHENA_CORE_NUMBER=4
[2025-07-26 03:10:32] Starting ATLAS job with PandaID=6742328745
[2025-07-26 03:10:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:49:42 (1849993): wrapper (7.7.26015): starting
07:49:42 (1849993): wrapper: running run_atlas (--nthreads 4)
[2025-07-26 07:49:42] Arguments: --nthreads 4
[2025-07-26 07:49:42] Threads: 4
[2025-07-26 07:49:42] This job has been restarted, cleaning up previous attempt
[2025-07-26 07:49:42] Checking for CVMFS
[2025-07-26 07:49:42] No cvmfs_config command found, will try listing directly
[2025-07-26 07:49:42] CVMFS is ok
[2025-07-26 07:49:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-26 07:49:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-26 07:49:42] Further information can be found at the LHC@home message board.
[2025-07-26 07:49:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-26 07:49:42] Checking for apptainer binary...
[2025-07-26 07:49:42] which: no apptainer in ((null))
[2025-07-26 07:49:42] apptainer is not installed, using version from CVMFS
[2025-07-26 07:49:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-26 07:49:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-07-26 07:49:42] apptainer works
[2025-07-26 07:49:42] Set ATHENA_PROC_NUMBER=4
[2025-07-26 07:49:42] Set ATHENA_CORE_NUMBER=4
[2025-07-26 07:49:42] Starting ATLAS job with PandaID=6742328745
[2025-07-26 07:49:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-26 12:25:26]  *** The last 200 lines of the pilot log: ***
[2025-07-26 12:25:26] 2025-07-26 10:24:52,167 | INFO     | chi2: 0.029859740489343593
[2025-07-26 12:25:26] 2025-07-26 10:24:52,167 | INFO     | current chi2=0.029859740489343593 (change=97.67989263103098 %)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,167 | INFO     | sum of square deviations: 5449944045.0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,169 | INFO     | sum of deviations: 3993067594.5000005
[2025-07-26 12:25:26] 2025-07-26 10:24:52,169 | INFO     | mean x: 1753517528.5
[2025-07-26 12:25:26] 2025-07-26 10:24:52,169 | INFO     | mean y: 2369021.5576923075
[2025-07-26 12:25:26] 2025-07-26 10:24:52,169 | INFO     | -- intersect: -1282399035.0730765
[2025-07-26 12:25:26] 2025-07-26 10:24:52,169 | INFO     | intersect: -1282399035.0730765
[2025-07-26 12:25:26] 2025-07-26 10:24:52,170 | INFO     | monitor loop #1200: job 0:6742328745 is in state 'finished'
[2025-07-26 12:25:26] 2025-07-26 10:24:52,170 | INFO     | chi2: 0.022343123687338463
[2025-07-26 12:25:26] 2025-07-26 10:24:52,170 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,170 | INFO     | current chi2=0.022343123687338463 (change=25.17308147633659 %)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,171 | INFO     | sum of square deviations: 5141528960.0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,173 | INFO     | sum of deviations: 9638799038.999998
[2025-07-26 12:25:26] 2025-07-26 10:24:52,173 | INFO     | mean x: 1753517681.0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,173 | INFO     | mean y: 2366227.725490196
[2025-07-26 12:25:26] 2025-07-26 10:24:52,173 | INFO     | -- intersect: -3284944739.495495
[2025-07-26 12:25:26] 2025-07-26 10:24:52,173 | INFO     | intersect: -3284944739.495495
[2025-07-26 12:25:26] 2025-07-26 10:24:52,173 | INFO     | chi2: 0.0010313135999085808
[2025-07-26 12:25:26] 2025-07-26 10:24:52,174 | INFO     | current chi2=0.0010313135999085808 (change=95.38420135724796 %)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,174 | INFO     | sum of square deviations: 4844974562.5
[2025-07-26 12:25:26] 2025-07-26 10:24:52,176 | INFO     | sum of deviations: 8094930122.5
[2025-07-26 12:25:26] 2025-07-26 10:24:52,176 | INFO     | mean x: 1753517833.5
[2025-07-26 12:25:26] 2025-07-26 10:24:52,176 | INFO     | mean y: 2367020.756
[2025-07-26 12:25:26] 2025-07-26 10:24:52,176 | INFO     | -- intersect: -2927391257.1524177
[2025-07-26 12:25:26] 2025-07-26 10:24:52,176 | INFO     | intersect: -2927391257.1524177
[2025-07-26 12:25:26] 2025-07-26 10:24:52,176 | INFO     | chi2: 0.0003823616856440718
[2025-07-26 12:25:26] 2025-07-26 10:24:52,176 | INFO     | current chi2=0.0003823616856440718 (change=62.92478973631632 %)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,177 | INFO     | sum of square deviations: 4560048290.0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,178 | INFO     | sum of deviations: 7142334449.999999
[2025-07-26 12:25:26] 2025-07-26 10:24:52,179 | INFO     | mean x: 1753517986.0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,179 | INFO     | mean y: 2367530.432653061
[2025-07-26 12:25:26] 2025-07-26 10:24:52,179 | INFO     | -- intersect: -2744141086.058866
[2025-07-26 12:25:26] 2025-07-26 10:24:52,179 | INFO     | intersect: -2744141086.058866
[2025-07-26 12:25:26] 2025-07-26 10:24:52,179 | INFO     | chi2: 0.00022888361176965865
[2025-07-26 12:25:26] 2025-07-26 10:24:52,179 | INFO     | current chi2=0.00022888361176965865 (change=40.139501324743335 %)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,180 | INFO     | sum of square deviations: 4286517580.0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,181 | INFO     | sum of deviations: 6592960458.999999
[2025-07-26 12:25:26] 2025-07-26 10:24:52,181 | INFO     | mean x: 1753518138.5
[2025-07-26 12:25:26] 2025-07-26 10:24:52,182 | INFO     | mean y: 2367836.0083333333
[2025-07-26 12:25:26] 2025-07-26 10:24:52,182 | INFO     | -- intersect: -2694664320.1667466
[2025-07-26 12:25:26] 2025-07-26 10:24:52,182 | INFO     | intersect: -2694664320.1667466
[2025-07-26 12:25:26] 2025-07-26 10:24:52,182 | INFO     | chi2: 0.00020082499198374086
[2025-07-26 12:25:26] 2025-07-26 10:24:52,182 | INFO     | current chi2=0.00020082499198374086 (change=12.25890292842596 %)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,182 | INFO     | left removable region: 60
[2025-07-26 12:25:26] 2025-07-26 10:24:52,183 | INFO     | sum of square deviations: 2632440055.0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,184 | INFO     | sum of deviations: 3871900122.4999995
[2025-07-26 12:25:26] 2025-07-26 10:24:52,184 | INFO     | mean x: 1753518870.5
[2025-07-26 12:25:26] 2025-07-26 10:24:52,184 | INFO     | mean y: 2369271.612745098
[2025-07-26 12:25:26] 2025-07-26 10:24:52,184 | INFO     | -- intersect: -2576777750.7854576
[2025-07-26 12:25:26] 2025-07-26 10:24:52,184 | INFO     | intersect: -2576777750.7854576
[2025-07-26 12:25:26] 2025-07-26 10:24:52,185 | INFO     | chi2: 0.000165946651071949
[2025-07-26 12:25:26] 2025-07-26 10:24:52,185 | INFO     | -- intersect: -2576777750.7854576
[2025-07-26 12:25:26] 2025-07-26 10:24:52,185 | INFO     | current memory leak: 1.47 B/s (using 204 data points, chi2=0.00)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | could have reported an average CPU frequency of 2550 MHz (13 samples)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | ..............................
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . Timing measurements:
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . get job = 0 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . initial setup = 1 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . payload setup = 6 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . stage-in = 0 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . payload execution = 16463 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . stage-out = 1 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | . log creation = 0 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,186 | INFO     | ..............................
[2025-07-26 12:25:26] 2025-07-26 10:24:52,685 | INFO     | 
[2025-07-26 12:25:26] 2025-07-26 10:24:52,685 | INFO     | job summary report
[2025-07-26 12:25:26] 2025-07-26 10:24:52,685 | INFO     | --------------------------------------------------
[2025-07-26 12:25:26] 2025-07-26 10:24:52,685 | INFO     | PanDA job id: 6742328745
[2025-07-26 12:25:26] 2025-07-26 10:24:52,685 | INFO     | task id: 45697472
[2025-07-26 12:25:26] 2025-07-26 10:24:52,685 | INFO     | errors: (none)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | pilot state: finished 
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | transexitcode: 0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | exeerrorcode: 0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | exeerrordiag: 
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | exitcode: 0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | exitmsg: OK
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | cpuconsumptiontime: 63625 s
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | nevents: 400
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | neventsw: 0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | pid: 1861387
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | pgrp: 1861387
[2025-07-26 12:25:26] 2025-07-26 10:24:52,686 | INFO     | corecount: 4
[2025-07-26 12:25:26] 2025-07-26 10:24:52,687 | INFO     | event service: False
[2025-07-26 12:25:26] 2025-07-26 10:24:52,687 | INFO     | sizes: {0: 2397557, 5: 2397819, 11: 2397875, 16474: 2429477, 16476: 2438497, 16479: 2438553, 16484: 2438875}
[2025-07-26 12:25:26] 2025-07-26 10:24:52,687 | INFO     | --------------------------------------------------
[2025-07-26 12:25:26] 2025-07-26 10:24:52,687 | INFO     | 
[2025-07-26 12:25:26] 2025-07-26 10:24:52,687 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2025-07-26 12:25:26] 2025-07-26 10:24:52,709 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,710 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-26 12:25:26] 2025-07-26 10:24:52,712 | INFO     | job 6742328745 has completed (purged errors)
[2025-07-26 12:25:26] 2025-07-26 10:24:52,712 | INFO     | overall cleanup function is called
[2025-07-26 12:25:26] 2025-07-26 10:24:53,720 | INFO     | --- collectZombieJob: --- 10, [1861387]
[2025-07-26 12:25:26] 2025-07-26 10:24:53,720 | INFO     | zombie collector waiting for pid 1861387
[2025-07-26 12:25:26] 2025-07-26 10:24:53,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-26 12:25:26] 2025-07-26 10:24:53,720 | INFO     | collected zombie processes
[2025-07-26 12:25:26] 2025-07-26 10:24:53,720 | INFO     | will attempt to kill all subprocesses of pid=1861387
[2025-07-26 12:25:26] 2025-07-26 10:24:54,048 | INFO     | process IDs to be killed: [1861387] (in reverse order)
[2025-07-26 12:25:26] 2025-07-26 10:24:54,162 | WARNING  | found no corresponding commands to process id(s)
[2025-07-26 12:25:26] 2025-07-26 10:24:54,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-26 12:25:26] 2025-07-26 10:24:54,172 | INFO     | did not find any defunct processes belonging to 1861387
[2025-07-26 12:25:26] 2025-07-26 10:24:54,182 | INFO     | did not find any defunct processes belonging to 1861387
[2025-07-26 12:25:26] 2025-07-26 10:24:54,183 | INFO     | ready for new job
[2025-07-26 12:25:26] 2025-07-26 10:24:54,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-26 12:25:26] 2025-07-26 10:24:54,185 | INFO     | ***************************************
[2025-07-26 12:25:26] 2025-07-26 10:24:54,185 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-26 12:25:26] 2025-07-26 10:24:54,185 | INFO     | ***************************************
[2025-07-26 12:25:26] 2025-07-26 10:24:54,185 | INFO     | 
[2025-07-26 12:25:26] 2025-07-26 10:24:54,189 | INFO     | architecture information:
[2025-07-26 12:25:26] 2025-07-26 10:24:54,189 | INFO     | executing command: cat /etc/os-release
[2025-07-26 12:25:26] 2025-07-26 10:24:54,204 | INFO     | cat /etc/os-release:
[2025-07-26 12:25:26] NAME="CentOS Linux"
[2025-07-26 12:25:26] VERSION="7 (Core)"
[2025-07-26 12:25:26] ID="centos"
[2025-07-26 12:25:26] ID_LIKE="rhel fedora"
[2025-07-26 12:25:26] VERSION_ID="7"
[2025-07-26 12:25:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-26 12:25:26] ANSI_COLOR="0;31"
[2025-07-26 12:25:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-26 12:25:26] HOME_URL="https://www.centos.org/"
[2025-07-26 12:25:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-26 12:25:26] 
[2025-07-26 12:25:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-26 12:25:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-26 12:25:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-26 12:25:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-26 12:25:26] 
[2025-07-26 12:25:26] 2025-07-26 10:24:54,204 | INFO     | ***************************************
[2025-07-26 12:25:26] 2025-07-26 10:24:54,707 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2025-07-26 12:25:26] 2025-07-26 10:24:54,721 | INFO     | sufficient remaining disk space (655106244608 B)
[2025-07-26 12:25:26] 2025-07-26 10:24:54,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-26 12:25:26] 2025-07-26 10:24:54,722 | INFO     | current server update state: UPDATING_FINAL
[2025-07-26 12:25:26] 2025-07-26 10:24:54,722 | INFO     | update_server=False
[2025-07-26 12:25:26] 2025-07-26 10:24:54,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-26 12:25:26] 2025-07-26 10:24:54,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-26 12:25:26] 2025-07-26 10:24:55,291 | INFO     | all payload control threads have been joined
[2025-07-26 12:25:26] 2025-07-26 10:24:55,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:25:26] 2025-07-26 10:24:55,678 | INFO     | aborting loop
[2025-07-26 12:25:26] 2025-07-26 10:24:55,726 | INFO     | [job] retrieve thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:55,797 | INFO     | all data control threads have been joined
[2025-07-26 12:25:26] 2025-07-26 10:24:55,883 | INFO     | [data] copytool_in thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:56,068 | INFO     | [payload] execute_payloads thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:56,266 | INFO     | all job control threads have been joined
[2025-07-26 12:25:26] 2025-07-26 10:24:56,296 | INFO     | [payload] control thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:56,509 | INFO     | [job] validate thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:56,683 | INFO     | [job] job monitor thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:56,727 | INFO     | [data] copytool_out thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:56,802 | INFO     | [data] control thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:56,867 | INFO     | [job] create_data_payload thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:57,119 | INFO     | [payload] validate_post thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:57,183 | INFO     | [payload] failed_post thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:57,195 | INFO     | [payload] validate_pre thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:57,271 | INFO     | [job] control thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:24:57,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-26 12:25:26] 2025-07-26 10:24:57,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-26 12:25:26] 2025-07-26 10:24:58,297 | INFO     | [job] queue monitor thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:25:01,640 | INFO     | [data] queue_monitor thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:25:05,482 | INFO     | job.realtimelogging is not enabled
[2025-07-26 12:25:26] 2025-07-26 10:25:06,487 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-26 12:25:26] 2025-07-26 10:25:07,723 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22830103570240)>', '<ExcThread(monitor, started 22829865072384)>']
[2025-07-26 12:25:26] 2025-07-26 10:25:12,748 | INFO     | all workflow threads have been joined
[2025-07-26 12:25:26] 2025-07-26 10:25:12,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-26 12:25:26] 2025-07-26 10:25:12,748 | INFO     | traces error code: 0
[2025-07-26 12:25:26] 2025-07-26 10:25:12,749 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-26 12:25:26] 2025-07-26 10:25:26,126 | INFO     | PID=1853810 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-26 12:25:26] 2025-07-26 10:25:26,127 | INFO     | .. there are 12 such processes running
[2025-07-26 12:25:26] 2025-07-26 10:25:26,127 | INFO     | found 0 job(s) in 20 queues
[2025-07-26 12:25:26] 2025-07-26 10:25:26,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-26 12:25:26] 2025-07-26 10:25:26,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-26 12:25:26] 2025-07-26 10:25:26,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-26 12:25:26] 2025-07-26 10:25:26,127 | INFO     | [monitor] control thread has ended
[2025-07-26 12:25:26] 2025-07-26 10:25:26,300 [wrapper] ==== pilot stdout END ====
[2025-07-26 12:25:26] 2025-07-26 10:25:26,302 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-26 12:25:26] 2025-07-26 10:25:26,305 [wrapper] pilotpid: 1853810
[2025-07-26 12:25:26] 2025-07-26 10:25:26,307 [wrapper] Pilot exit status: 0
[2025-07-26 12:25:26] 2025-07-26 10:25:26,317 [wrapper] pandaids: 6742328745 6742328745
[2025-07-26 12:25:26] 2025-07-26 10:25:26,379 [wrapper] cleanup supervisor_pilot 2452733 1853811
[2025-07-26 12:25:26] 2025-07-26 10:25:26,382 [wrapper] Test setup, not cleaning
[2025-07-26 12:25:26] 2025-07-26 10:25:26,384 [wrapper] apfmon messages muted
[2025-07-26 12:25:26] 2025-07-26 10:25:26,387 [wrapper] ==== wrapper stdout END ====
[2025-07-26 12:25:26] 2025-07-26 10:25:26,389 [wrapper] ==== wrapper stderr END ====
[2025-07-26 12:25:26]  *** Error codes and diagnostics ***
[2025-07-26 12:25:26]     "exeErrorCode": 0,
[2025-07-26 12:25:26]     "exeErrorDiag": "",
[2025-07-26 12:25:26]     "pilotErrorCode": 0,
[2025-07-26 12:25:26]     "pilotErrorDiag": "",
[2025-07-26 12:25:26]  *** Listing of results directory ***
[2025-07-26 12:25:26] total 932868
[2025-07-26 12:25:26] drwx------ 4 boinc boinc      4096 Jun 17 12:04 pilot3
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc    530466 Jul 23 14:25 pilot3.tar.gz
[2025-07-26 12:25:26] -rwx------ 1 boinc boinc     36292 Jul 23 14:26 runpilot2-wrapper.sh
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc      5112 Jul 23 14:26 queuedata.json
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc       100 Jul 26 03:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-26 12:25:26] -rwxr-xr-x 1 boinc boinc      7986 Jul 26 03:08 run_atlas
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc       105 Jul 26 03:08 job.xml
[2025-07-26 12:25:26] -rw-r--r-- 3 boinc boinc 333758987 Jul 26 03:10 EVNT.45697470._000245.pool.root.1
[2025-07-26 12:25:26] -rw-r--r-- 3 boinc boinc 333758987 Jul 26 03:10 ATLAS.root_0
[2025-07-26 12:25:26] drwxrwx--x 2 boinc boinc      4096 Jul 26 03:10 shared
[2025-07-26 12:25:26] -rw-r--r-- 2 boinc boinc    542899 Jul 26 03:10 input.tar.gz
[2025-07-26 12:25:26] -rw-r--r-- 2 boinc boinc     15095 Jul 26 03:10 start_atlas.sh
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc         0 Jul 26 03:10 boinc_lockfile
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc      2613 Jul 26 07:49 pandaJob.out
[2025-07-26 12:25:26] -rw------- 1 boinc boinc    980001 Jul 26 07:49 agis_schedconf.cvmfs.json
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc      6642 Jul 26 08:10 init_data.xml
[2025-07-26 12:25:26] -rw------- 1 boinc boinc 280083166 Jul 26 12:23 HITS.45697472._006107.pool.root.1
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc       532 Jul 26 12:24 boinc_task_state.xml
[2025-07-26 12:25:26] -rw------- 1 boinc boinc      1045 Jul 26 12:24 memory_monitor_summary.json
[2025-07-26 12:25:26] -rw------- 1 boinc boinc   1593052 Jul 26 12:24 agis_ddmendpoints.agis.ALL.json
[2025-07-26 12:25:26] -rw------- 1 boinc boinc    347653 Jul 26 12:24 log.45697472._006107.job.log.tgz.1
[2025-07-26 12:25:26] -rw------- 1 boinc boinc      7842 Jul 26 12:24 heartbeat.json
[2025-07-26 12:25:26] -rw------- 1 boinc boinc        97 Jul 26 12:24 pilot_heartbeat.json
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc      8192 Jul 26 12:25 boinc_mmap_file
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc        29 Jul 26 12:25 wrapper_checkpoint.txt
[2025-07-26 12:25:26] -rw------- 1 boinc boinc       823 Jul 26 12:25 pilotlog.txt
[2025-07-26 12:25:26] -rw------- 1 boinc boinc   1537506 Jul 26 12:25 log.45697472._006107.job.log.1
[2025-07-26 12:25:26] -rw------- 1 boinc boinc       357 Jul 26 12:25 output.list
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc       620 Jul 26 12:25 runtime_log
[2025-07-26 12:25:26] -rw------- 1 boinc boinc   1904640 Jul 26 12:25 result.tar.gz
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc      9104 Jul 26 12:25 runtime_log.err
[2025-07-26 12:25:26] -rw------- 1 boinc boinc       794 Jul 26 12:25 Z3SMDmcjny7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfaLLDmvOUi4n.diag
[2025-07-26 12:25:26] -rw-r--r-- 1 boinc boinc     22735 Jul 26 12:25 stderr.txt
[2025-07-26 12:25:26] HITS file was successfully produced:
[2025-07-26 12:25:26] -rw------- 1 boinc boinc 280083166 Jul 26 12:23 shared/HITS.pool.root.1
[2025-07-26 12:25:26]  *** Contents of shared directory: ***
[2025-07-26 12:25:26] total 601876
[2025-07-26 12:25:26] -rw-r--r-- 3 boinc boinc 333758987 Jul 26 03:10 ATLAS.root_0
[2025-07-26 12:25:26] -rw-r--r-- 2 boinc boinc    542899 Jul 26 03:10 input.tar.gz
[2025-07-26 12:25:26] -rw-r--r-- 2 boinc boinc     15095 Jul 26 03:10 start_atlas.sh
[2025-07-26 12:25:26] -rw------- 1 boinc boinc 280083166 Jul 26 12:23 HITS.pool.root.1
[2025-07-26 12:25:26] -rw------- 1 boinc boinc   1904640 Jul 26 12:25 result.tar.gz
12:25:28 (1849993): run_atlas exited; CPU time 64280.841330
12:25:28 (1849993): called boinc_finish(0)

</stderr_txt>
]]>

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