Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:49:52 (2128809): wrapper (7.7.26015): starting
14:49:52 (2128809): wrapper: running run_atlas (--nthreads 8)
[2025-07-23 14:49:52] Arguments: --nthreads 8
[2025-07-23 14:49:52] Threads: 8
[2025-07-23 14:49:52] Checking for CVMFS
[2025-07-23 14:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-23 14:49:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-23 14:49:53] Running cvmfs_config stat atlas.cern.ch
[2025-07-23 14:49:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-23 14:49:53] 2.12.6.0 2554489 12982 325236 148668 2 348 26080430 40960001 17076 16776704 0 40504955 99.783 42134754 22362 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-07-23 14:49:53] CVMFS is ok
[2025-07-23 14:49:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-07-23 14:49:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-07-23 14:49:53] Further information can be found at the LHC@home message board.
[2025-07-23 14:49:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-23 14:49:53] Checking for apptainer binary...
[2025-07-23 14:49:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-23 14:49:53] Running /usr/bin/apptainer --version
[2025-07-23 14:49:53] apptainer version 1.4.1-1.el9
[2025-07-23 14:49:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-23 14:49:54] c7-13-33.aglt2.org
[2025-07-23 14:49:54] apptainer works
[2025-07-23 14:49:54] Set ATHENA_PROC_NUMBER=8
[2025-07-23 14:49:54] Set ATHENA_CORE_NUMBER=8
[2025-07-23 14:49:54] Starting ATLAS job with PandaID=6742327466
[2025-07-23 14:49:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-23 17:47:02]  *** The last 200 lines of the pilot log: ***
[2025-07-23 17:47:02] 2025-07-23 21:46:26,733 | INFO     | executing command: lscpu
[2025-07-23 17:47:02] 2025-07-23 21:46:26,782 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-07-23 17:47:02] 2025-07-23 21:46:28,157 | INFO     | monitor loop #735: job 0:6742327466 is in state 'finished'
[2025-07-23 17:47:02] 2025-07-23 21:46:28,157 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,117 | INFO     | CPU arch script returned: x86-64-v3
[2025-07-23 17:47:02] 2025-07-23 21:46:30,123 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3235.069984375
[2025-07-23 17:47:02] 2025-07-23 21:46:30,133 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6742327466/memory_monitor_summary.json (trf name=prmon)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,134 | INFO     | extracted standard info from prmon json
[2025-07-23 17:47:02] 2025-07-23 21:46:30,134 | INFO     | extracted standard memory fields from prmon json
[2025-07-23 17:47:02] 2025-07-23 21:46:30,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-07-23 17:47:02] 2025-07-23 21:46:30,134 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-23 17:47:02] 2025-07-23 21:46:30,134 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-23 17:47:02] 2025-07-23 21:46:30,137 | INFO     | fitting pss+swap vs Time
[2025-07-23 17:47:02] 2025-07-23 21:46:30,137 | INFO     | sum of square deviations: 1577892773.0406969
[2025-07-23 17:47:02] 2025-07-23 21:46:30,138 | INFO     | sum of deviations: 1108877468.4767394
[2025-07-23 17:47:02] 2025-07-23 21:46:30,138 | INFO     | mean x: 1753301923.7151163
[2025-07-23 17:47:02] 2025-07-23 21:46:30,138 | INFO     | mean y: 2183007.6627906975
[2025-07-23 17:47:02] 2025-07-23 21:46:30,138 | INFO     | -- intersect: -1229964722.4380498
[2025-07-23 17:47:02] 2025-07-23 21:46:30,138 | INFO     | intersect: -1229964722.4380498
[2025-07-23 17:47:02] 2025-07-23 21:46:30,139 | INFO     | chi2: 1.881383322588566
[2025-07-23 17:47:02] 2025-07-23 21:46:30,139 | INFO     | sum of square deviations: 1444264342.8023899
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | sum of deviations: 3725359656.838326
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | mean x: 1753301771.221557
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | mean y: 2185972.5449101795
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | -- intersect: -4520310007.72569
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | intersect: -4520310007.72569
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | chi2: 1.8716266436392548
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | current chi2=1.8716266436392548 (change=0.5185907003729178 %)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,140 | INFO     | right removable region: 166
[2025-07-23 17:47:02] 2025-07-23 21:46:30,141 | INFO     | sum of square deviations: 1444241772.8023899
[2025-07-23 17:47:02] 2025-07-23 21:46:30,141 | INFO     | sum of deviations: -24181233751.730545
[2025-07-23 17:47:02] 2025-07-23 21:46:30,141 | INFO     | mean x: 1753302076.221557
[2025-07-23 17:47:02] 2025-07-23 21:46:30,142 | INFO     | mean y: 2211549.4251497006
[2025-07-23 17:47:02] 2025-07-23 21:46:30,142 | INFO     | -- intersect: 29358104822.226208
[2025-07-23 17:47:02] 2025-07-23 21:46:30,142 | INFO     | intersect: 29358104822.226208
[2025-07-23 17:47:02] 2025-07-23 21:46:30,142 | INFO     | chi2: 0.28064738300144587
[2025-07-23 17:47:02] 2025-07-23 21:46:30,142 | INFO     | current chi2=0.28064738300144587 (change=85.08292384481715 %)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,142 | INFO     | sum of square deviations: 1318358360.0493882
[2025-07-23 17:47:02] 2025-07-23 21:46:30,143 | INFO     | sum of deviations: -22019127145.876534
[2025-07-23 17:47:02] 2025-07-23 21:46:30,143 | INFO     | mean x: 1753302228.728395
[2025-07-23 17:47:02] 2025-07-23 21:46:30,143 | INFO     | mean y: 2208907.3209876544
[2025-07-23 17:47:02] 2025-07-23 21:46:30,143 | INFO     | -- intersect: 29285737475.435783
[2025-07-23 17:47:02] 2025-07-23 21:46:30,143 | INFO     | intersect: 29285737475.435783
[2025-07-23 17:47:02] 2025-07-23 21:46:30,143 | INFO     | chi2: 0.27813311817001235
[2025-07-23 17:47:02] 2025-07-23 21:46:30,143 | INFO     | current chi2=0.27813311817001235 (change=0.8958803764867346 %)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,144 | INFO     | left removable region: 20
[2025-07-23 17:47:02] 2025-07-23 21:46:30,144 | INFO     | sum of square deviations: 965047823.1232873
[2025-07-23 17:47:02] 2025-07-23 21:46:30,144 | INFO     | sum of deviations: -7195381802.397263
[2025-07-23 17:47:02] 2025-07-23 21:46:30,144 | INFO     | mean x: 1753302350.7534246
[2025-07-23 17:47:02] 2025-07-23 21:46:30,144 | INFO     | mean y: 2195879.294520548
[2025-07-23 17:47:02] 2025-07-23 21:46:30,145 | INFO     | -- intersect: 13074791378.118675
[2025-07-23 17:47:02] 2025-07-23 21:46:30,145 | INFO     | intersect: 13074791378.118675
[2025-07-23 17:47:02] 2025-07-23 21:46:30,145 | INFO     | chi2: 0.1904332134934447
[2025-07-23 17:47:02] 2025-07-23 21:46:30,145 | INFO     | -- intersect: 13074791378.118675
[2025-07-23 17:47:02] 2025-07-23 21:46:30,145 | INFO     | current memory leak: -7.46 B/s (using 146 data points, chi2=0.19)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,145 | INFO     | could have reported an average CPU frequency of 3279 MHz (9 samples)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | ..............................
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . Timing measurements:
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . get job = 0 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . initial setup = 4 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . payload setup = 32 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . stage-in = 0 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . payload execution = 10484 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . stage-out = 1 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | . log creation = 0 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,146 | INFO     | ..............................
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | 
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | job summary report
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | --------------------------------------------------
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | PanDA job id: 6742327466
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | task id: 45697472
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | errors: (none)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | pilot state: finished 
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | transexitcode: 0
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | exeerrorcode: 0
[2025-07-23 17:47:02] 2025-07-23 21:46:30,222 | INFO     | exeerrordiag: 
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | exitcode: 0
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | exitmsg: OK
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | cpuconsumptiontime: 48134 s
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | nevents: 400
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | neventsw: 0
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | pid: 2140043
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | pgrp: 2140043
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | corecount: 8
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | event service: False
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | sizes: {0: 2396708, 1: 2397564, 12: 2397564, 22: 2397854, 23: 2397882, 10520: 2426868, 10521: 2426995, 10522: 2436049, 10523: 2436105, 10526: 2436363}
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | --------------------------------------------------
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | 
[2025-07-23 17:47:02] 2025-07-23 21:46:30,223 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-07-23 17:47:02] 2025-07-23 21:46:30,242 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,243 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-23 17:47:02] 2025-07-23 21:46:30,244 | INFO     | job 6742327466 has completed (purged errors)
[2025-07-23 17:47:02] 2025-07-23 21:46:30,244 | INFO     | overall cleanup function is called
[2025-07-23 17:47:02] 2025-07-23 21:46:31,252 | INFO     | --- collectZombieJob: --- 10, [2140043]
[2025-07-23 17:47:02] 2025-07-23 21:46:31,252 | INFO     | zombie collector waiting for pid 2140043
[2025-07-23 17:47:02] 2025-07-23 21:46:31,252 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-23 17:47:02] 2025-07-23 21:46:31,252 | INFO     | collected zombie processes
[2025-07-23 17:47:02] 2025-07-23 21:46:31,252 | INFO     | will attempt to kill all subprocesses of pid=2140043
[2025-07-23 17:47:02] 2025-07-23 21:46:31,528 | INFO     | process IDs to be killed: [2140043] (in reverse order)
[2025-07-23 17:47:02] 2025-07-23 21:46:31,641 | WARNING  | found no corresponding commands to process id(s)
[2025-07-23 17:47:02] 2025-07-23 21:46:31,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-23 17:47:02] 2025-07-23 21:46:31,655 | INFO     | did not find any defunct processes belonging to 2140043
[2025-07-23 17:47:02] 2025-07-23 21:46:31,668 | INFO     | did not find any defunct processes belonging to 2140043
[2025-07-23 17:47:02] 2025-07-23 21:46:31,668 | INFO     | ready for new job
[2025-07-23 17:47:02] 2025-07-23 21:46:31,669 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-23 17:47:02] 2025-07-23 21:46:31,670 | INFO     | ***************************************
[2025-07-23 17:47:02] 2025-07-23 21:46:31,670 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-23 17:47:02] 2025-07-23 21:46:31,670 | INFO     | ***************************************
[2025-07-23 17:47:02] 2025-07-23 21:46:31,670 | INFO     | 
[2025-07-23 17:47:02] 2025-07-23 21:46:31,685 | INFO     | architecture information:
[2025-07-23 17:47:02] 2025-07-23 21:46:31,686 | INFO     | executing command: cat /etc/os-release
[2025-07-23 17:47:02] 2025-07-23 21:46:31,701 | INFO     | cat /etc/os-release:
[2025-07-23 17:47:02] NAME="CentOS Linux"
[2025-07-23 17:47:02] VERSION="7 (Core)"
[2025-07-23 17:47:02] ID="centos"
[2025-07-23 17:47:02] ID_LIKE="rhel fedora"
[2025-07-23 17:47:02] VERSION_ID="7"
[2025-07-23 17:47:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-23 17:47:02] ANSI_COLOR="0;31"
[2025-07-23 17:47:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-23 17:47:02] HOME_URL="https://www.centos.org/"
[2025-07-23 17:47:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-23 17:47:02] 
[2025-07-23 17:47:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-23 17:47:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-23 17:47:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-23 17:47:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-23 17:47:02] 
[2025-07-23 17:47:02] 2025-07-23 21:46:31,702 | INFO     | ***************************************
[2025-07-23 17:47:02] 2025-07-23 21:46:32,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-07-23 17:47:02] 2025-07-23 21:46:32,222 | INFO     | sufficient remaining disk space (85283831808 B)
[2025-07-23 17:47:02] 2025-07-23 21:46:32,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-23 17:47:02] 2025-07-23 21:46:32,222 | INFO     | current server update state: UPDATING_FINAL
[2025-07-23 17:47:02] 2025-07-23 21:46:32,222 | INFO     | update_server=False
[2025-07-23 17:47:02] 2025-07-23 21:46:32,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-23 17:47:02] 2025-07-23 21:46:32,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:47:02] 2025-07-23 21:46:32,223 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-23 17:47:02] 2025-07-23 21:46:32,223 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-23 17:47:02] 2025-07-23 21:46:32,223 | INFO     | aborting loop
[2025-07-23 17:47:02] 2025-07-23 21:46:32,236 | INFO     | all data control threads have been joined
[2025-07-23 17:47:02] 2025-07-23 21:46:32,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-23 17:47:02] 2025-07-23 21:46:32,933 | INFO     | all payload control threads have been joined
[2025-07-23 17:47:02] 2025-07-23 21:46:33,227 | INFO     | [job] retrieve thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,228 | INFO     | [job] queue monitor thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,228 | INFO     | [job] job monitor thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,242 | INFO     | [data] control thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,292 | INFO     | [data] copytool_in thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,325 | INFO     | all job control threads have been joined
[2025-07-23 17:47:02] 2025-07-23 21:46:33,405 | INFO     | [job] create_data_payload thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,680 | INFO     | [payload] validate_post thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,898 | INFO     | [job] validate thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:33,938 | INFO     | [payload] control thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:34,018 | INFO     | [payload] failed_post thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:34,228 | INFO     | [data] copytool_out thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:34,331 | INFO     | [job] control thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:34,464 | INFO     | [payload] execute_payloads thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:34,640 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:34,712 | INFO     | [payload] validate_pre thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:36,718 | INFO     | [data] queue_monitor thread has finished
[2025-07-23 17:47:02] 2025-07-23 21:46:36,766 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559234062144)>', '<ExcThread(monitor, started 140558290900736)>']
[2025-07-23 17:47:02] 2025-07-23 21:46:41,795 | INFO     | all workflow threads have been joined
[2025-07-23 17:47:02] 2025-07-23 21:46:41,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-23 17:47:02] 2025-07-23 21:46:41,796 | INFO     | traces error code: 0
[2025-07-23 17:47:02] 2025-07-23 21:46:41,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-23 17:47:02] 2025-07-23 21:47:01,884 | INFO     | PID=2132525 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-07-23 17:47:02] 2025-07-23 21:47:01,885 | INFO     | .. there are 16 such processes running
[2025-07-23 17:47:02] 2025-07-23 21:47:01,885 | INFO     | found 0 job(s) in 20 queues
[2025-07-23 17:47:02] 2025-07-23 21:47:01,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-23 17:47:02] 2025-07-23 21:47:01,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-23 17:47:02] 2025-07-23 21:47:01,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-23 17:47:02] 2025-07-23 21:47:01,886 | INFO     | [monitor] control thread has ended
[2025-07-23 17:47:02] 2025-07-23 21:47:02,029 [wrapper] ==== pilot stdout END ====
[2025-07-23 17:47:02] 2025-07-23 21:47:02,032 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-23 17:47:02] 2025-07-23 21:47:02,033 [wrapper] pilotpid: 2132525
[2025-07-23 17:47:02] 2025-07-23 21:47:02,035 [wrapper] Pilot exit status: 0
[2025-07-23 17:47:02] 2025-07-23 21:47:02,044 [wrapper] pandaids: 6742327466
[2025-07-23 17:47:02] 2025-07-23 21:47:02,111 [wrapper] cleanup supervisor_pilot 2737917 2132526
[2025-07-23 17:47:02] 2025-07-23 21:47:02,114 [wrapper] Test setup, not cleaning
[2025-07-23 17:47:02] 2025-07-23 21:47:02,116 [wrapper] apfmon messages muted
[2025-07-23 17:47:02] 2025-07-23 21:47:02,118 [wrapper] ==== wrapper stdout END ====
[2025-07-23 17:47:02] 2025-07-23 21:47:02,121 [wrapper] ==== wrapper stderr END ====
[2025-07-23 17:47:02]  *** Error codes and diagnostics ***
[2025-07-23 17:47:02]     "exeErrorCode": 0,
[2025-07-23 17:47:02]     "exeErrorDiag": "",
[2025-07-23 17:47:02]     "pilotErrorCode": 0,
[2025-07-23 17:47:02]     "pilotErrorDiag": "",
[2025-07-23 17:47:02]  *** Listing of results directory ***
[2025-07-23 17:47:02] total 600492
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas      5112 Jul 23 07:41 queuedata.json
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas    530466 Jul 23 07:41 pilot3.tar.gz
[2025-07-23 17:47:02] -rwx------. 1 boincer umatlas     36292 Jul 23 07:41 runpilot2-wrapper.sh
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas       100 Jul 23 14:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-23 17:47:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jul 23 14:49 run_atlas
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas       105 Jul 23 14:49 job.xml
[2025-07-23 17:47:02] -rw-r--r--. 2 boincer umatlas 327178320 Jul 23 14:49 EVNT.45697470._000223.pool.root.1
[2025-07-23 17:47:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 14:49 start_atlas.sh
[2025-07-23 17:47:02] drwxrwx--x. 2 boincer umatlas      4096 Jul 23 14:49 shared
[2025-07-23 17:47:02] -rw-r--r--. 2 boincer umatlas    542907 Jul 23 14:49 input.tar.gz
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas         0 Jul 23 14:49 boinc_lockfile
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas      2614 Jul 23 14:49 pandaJob.out
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas    978487 Jul 23 14:50 agis_schedconf.cvmfs.json
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas   1593041 Jul 23 14:50 agis_ddmendpoints.agis.ALL.json
[2025-07-23 17:47:02] drwx------. 4 boincer umatlas      4096 Jul 23 14:50 pilot3
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas      6898 Jul 23 17:39 init_data.xml
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas 281212637 Jul 23 17:45 HITS.45697472._005571.pool.root.1
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas       531 Jul 23 17:45 boinc_task_state.xml
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas      1044 Jul 23 17:46 memory_monitor_summary.json
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas    372352 Jul 23 17:46 log.45697472._005571.job.log.tgz.1
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas      7800 Jul 23 17:46 heartbeat.json
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas        28 Jul 23 17:46 wrapper_checkpoint.txt
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas       823 Jul 23 17:47 pilotlog.txt
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas        95 Jul 23 17:47 pilot_heartbeat.json
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas    948786 Jul 23 17:47 log.45697472._005571.job.log.1
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas       357 Jul 23 17:47 output.list
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas       620 Jul 23 17:47 runtime_log
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas   1341440 Jul 23 17:47 result.tar.gz
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas       658 Jul 23 17:47 SzaMDmc1my7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm2ULLDmLMHynm.diag
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas      8661 Jul 23 17:47 runtime_log.err
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas      8192 Jul 23 17:47 boinc_mmap_file
[2025-07-23 17:47:02] -rw-r--r--. 1 boincer umatlas     21337 Jul 23 17:47 stderr.txt
[2025-07-23 17:47:02] HITS file was successfully produced:
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas 281212637 Jul 23 17:45 shared/HITS.pool.root.1
[2025-07-23 17:47:02]  *** Contents of shared directory: ***
[2025-07-23 17:47:02] total 596000
[2025-07-23 17:47:02] -rw-r--r--. 2 boincer umatlas 327178320 Jul 23 14:49 ATLAS.root_0
[2025-07-23 17:47:02] -rw-r--r--. 2 boincer umatlas     15095 Jul 23 14:49 start_atlas.sh
[2025-07-23 17:47:02] -rw-r--r--. 2 boincer umatlas    542907 Jul 23 14:49 input.tar.gz
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas 281212637 Jul 23 17:45 HITS.pool.root.1
[2025-07-23 17:47:02] -rw-------. 1 boincer umatlas   1341440 Jul 23 17:47 result.tar.gz
17:47:04 (2128809): run_atlas exited; CPU time 48178.391280
17:47:04 (2128809): called boinc_finish(0)

</stderr_txt>
]]>

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