Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:11:30 (3918): wrapper (7.7.26015): starting
03:11:30 (3918): wrapper: running run_atlas (--nthreads 8)
[2025-07-24 03:11:30] Arguments: --nthreads 8
[2025-07-24 03:11:30] Threads: 8
[2025-07-24 03:11:30] Checking for CVMFS
[2025-07-24 03:11:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-07-24 03:11:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-07-24 03:11:31] Running cvmfs_config stat atlas.cern.ch
[2025-07-24 03:11:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-07-24 03:11:31] 2.11.2.0 16655 104531 138560 148676 0 210 18197273 25165824 3846 130560 0 75782569 99.850 46604095 3133 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-07-24 03:11:31] CVMFS is ok
[2025-07-24 03:11:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-07-24 03:11:31] Checking for apptainer binary...
[2025-07-24 03:11:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-07-24 03:11:31] Running /usr/bin/apptainer --version
[2025-07-24 03:11:31] apptainer version 1.3.2-1.el7
[2025-07-24 03:11:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-07-24 03:11:32] cg-vwn423.simple-grid.lan
[2025-07-24 03:11:32] apptainer works
[2025-07-24 03:11:32] Set ATHENA_PROC_NUMBER=8
[2025-07-24 03:11:32] Set ATHENA_CORE_NUMBER=8
[2025-07-24 03:11:33] Starting ATLAS job with PandaID=6742327647
[2025-07-24 03:11:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-07-24 09:48:31]  *** The last 200 lines of the pilot log: ***
[2025-07-24 09:48:31] 2025-07-24 07:10:47,986 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-07-24 09:48:31] 2025-07-24 07:10:47,986 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-07-24 09:48:31] 2025-07-24 07:10:48,001 | INFO     | fitting pss+swap vs Time
[2025-07-24 09:48:31] 2025-07-24 07:10:48,002 | INFO     | sum of square deviations: 13408995600.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,006 | INFO     | sum of deviations: 45810441118.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,006 | INFO     | mean x: 1753330243.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,006 | INFO     | mean y: 2546542.128205128
[2025-07-24 09:48:31] 2025-07-24 07:10:48,007 | INFO     | -- intersect: -5987524172.591108
[2025-07-24 09:48:31] 2025-07-24 07:10:48,007 | INFO     | intersect: -5987524172.591108
[2025-07-24 09:48:31] 2025-07-24 07:10:48,007 | INFO     | chi2: 2.3384690554846514
[2025-07-24 09:48:31] 2025-07-24 07:10:48,008 | INFO     | sum of square deviations: 12844082682.5
[2025-07-24 09:48:31] 2025-07-24 07:10:48,012 | INFO     | sum of deviations: 68879782237.99998
[2025-07-24 09:48:31] 2025-07-24 07:10:48,012 | INFO     | mean x: 1753330090.5
[2025-07-24 09:48:31] 2025-07-24 07:10:48,012 | INFO     | mean y: 2552695.358381503
[2025-07-24 09:48:31] 2025-07-24 07:10:48,012 | INFO     | -- intersect: -9400142523.158077
[2025-07-24 09:48:31] 2025-07-24 07:10:48,012 | INFO     | intersect: -9400142523.158077
[2025-07-24 09:48:31] 2025-07-24 07:10:48,013 | INFO     | chi2: 1.5656098233202826
[2025-07-24 09:48:31] 2025-07-24 07:10:48,013 | INFO     | current chi2=1.5656098233202826 (change=33.04979513633942 %)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,014 | INFO     | sum of square deviations: 12295263090.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,033 | INFO     | sum of deviations: 67711523291.99996
[2025-07-24 09:48:31] 2025-07-24 07:10:48,033 | INFO     | mean x: 1753329938.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,033 | INFO     | mean y: 2552370.7419354836
[2025-07-24 09:48:31] 2025-07-24 07:10:48,033 | INFO     | -- intersect: -9653250849.280731
[2025-07-24 09:48:31] 2025-07-24 07:10:48,033 | INFO     | intersect: -9653250849.280731
[2025-07-24 09:48:31] 2025-07-24 07:10:48,034 | INFO     | chi2: 1.5658572344398816
[2025-07-24 09:48:31] 2025-07-24 07:10:48,034 | INFO     | current chi2=1.5658572344398816 (change=-0.015802859429830188 %)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,034 | INFO     | right removable region: 340
[2025-07-24 09:48:31] 2025-07-24 07:10:48,035 | INFO     | sum of square deviations: 12844082682.5
[2025-07-24 09:48:31] 2025-07-24 07:10:48,039 | INFO     | sum of deviations: -13848934615.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,039 | INFO     | mean x: 1753330395.5
[2025-07-24 09:48:31] 2025-07-24 07:10:48,039 | INFO     | mean y: 2562564.38150289
[2025-07-24 09:48:31] 2025-07-24 07:10:48,039 | INFO     | -- intersect: 1893064097.733929
[2025-07-24 09:48:31] 2025-07-24 07:10:48,039 | INFO     | intersect: 1893064097.733929
[2025-07-24 09:48:31] 2025-07-24 07:10:48,040 | INFO     | chi2: 0.8634462001994075
[2025-07-24 09:48:31] 2025-07-24 07:10:48,040 | INFO     | current chi2=0.8634462001994075 (change=63.07643249867778 %)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,041 | INFO     | sum of square deviations: 12295263090.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,052 | INFO     | sum of deviations: -26555232296.999996
[2025-07-24 09:48:31] 2025-07-24 07:10:48,052 | INFO     | mean x: 1753330548.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,052 | INFO     | mean y: 2566078.8387096776
[2025-07-24 09:48:31] 2025-07-24 07:10:48,052 | INFO     | -- intersect: 3789398426.772332
[2025-07-24 09:48:31] 2025-07-24 07:10:48,052 | INFO     | intersect: 3789398426.772332
[2025-07-24 09:48:31] 2025-07-24 07:10:48,053 | INFO     | chi2: 0.7989636206670298
[2025-07-24 09:48:31] 2025-07-24 07:10:48,053 | INFO     | current chi2=0.7989636206670298 (change=7.468048329761129 %)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,053 | INFO     | left removable region: 20
[2025-07-24 09:48:31] 2025-07-24 07:10:48,054 | INFO     | sum of square deviations: 10160711440.0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,057 | INFO     | sum of deviations: -4225912829.5
[2025-07-24 09:48:31] 2025-07-24 07:10:48,058 | INFO     | mean x: 1753330517.5
[2025-07-24 09:48:31] 2025-07-24 07:10:48,058 | INFO     | mean y: 2572962.640625
[2025-07-24 09:48:31] 2025-07-24 07:10:48,058 | INFO     | -- intersect: 731795711.6587906
[2025-07-24 09:48:31] 2025-07-24 07:10:48,058 | INFO     | intersect: 731795711.6587906
[2025-07-24 09:48:31] 2025-07-24 07:10:48,059 | INFO     | chi2: 0.013356240291029192
[2025-07-24 09:48:31] 2025-07-24 07:10:48,059 | INFO     | -- intersect: 731795711.6587906
[2025-07-24 09:48:31] 2025-07-24 07:10:48,059 | INFO     | current memory leak: -0.42 B/s (using 320 data points, chi2=0.01)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,060 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,060 | INFO     | ..............................
[2025-07-24 09:48:31] 2025-07-24 07:10:48,060 | INFO     | . Timing measurements:
[2025-07-24 09:48:31] 2025-07-24 07:10:48,060 | INFO     | . get job = 0 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,060 | INFO     | . initial setup = 2 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,061 | INFO     | . payload setup = 14 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,061 | INFO     | . stage-in = 0 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,061 | INFO     | . payload execution = 21401 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,061 | INFO     | . stage-out = 3 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,061 | INFO     | . log creation = 1 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,061 | INFO     | ..............................
[2025-07-24 09:48:31] 2025-07-24 07:10:48,189 | INFO     | 
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | job summary report
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | --------------------------------------------------
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | PanDA job id: 6742327647
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | task id: 45697472
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | errors: (none)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | status: LOG_TRANSFER = DONE 
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | pilot state: finished 
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | transexitcode: 0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | exeerrorcode: 0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,190 | INFO     | exeerrordiag: 
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | exitcode: 0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | exitmsg: OK
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | cpuconsumptiontime: 82806 s
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | nevents: 400
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | neventsw: 0
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | pid: 14135
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | pgrp: 14135
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | corecount: 8
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | event service: False
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | sizes: {0: 2397365, 1: 2397564, 8: 2397826, 12: 2397854, 21420: 2431104, 21425: 2440286, 21518: 2440424}
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | --------------------------------------------------
[2025-07-24 09:48:31] 2025-07-24 07:10:48,191 | INFO     | 
[2025-07-24 09:48:31] 2025-07-24 07:10:48,192 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-07-24 09:48:31] 2025-07-24 07:10:48,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue payloads had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue completed_jobids has 1 job(s)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,620 | INFO     | queue messages had 0 job(s) [purged]
[2025-07-24 09:48:31] 2025-07-24 07:10:48,621 | INFO     | job 6742327647 has completed (purged errors)
[2025-07-24 09:48:31] 2025-07-24 07:10:48,621 | INFO     | overall cleanup function is called
[2025-07-24 09:48:31] 2025-07-24 07:10:49,633 | INFO     | --- collectZombieJob: --- 10, [14135]
[2025-07-24 09:48:31] 2025-07-24 07:10:49,633 | INFO     | zombie collector waiting for pid 14135
[2025-07-24 09:48:31] 2025-07-24 07:10:49,633 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-07-24 09:48:31] 2025-07-24 07:10:49,633 | INFO     | collected zombie processes
[2025-07-24 09:48:31] 2025-07-24 07:10:49,633 | INFO     | will attempt to kill all subprocesses of pid=14135
[2025-07-24 09:48:31] 2025-07-24 07:10:49,746 | INFO     | process IDs to be killed: [14135] (in reverse order)
[2025-07-24 09:48:31] 2025-07-24 07:10:50,631 | WARNING  | found no corresponding commands to process id(s)
[2025-07-24 09:48:31] 2025-07-24 07:10:50,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-07-24 09:48:31] 2025-07-24 07:10:50,635 | INFO     | did not find any defunct processes belonging to 14135
[2025-07-24 09:48:31] 2025-07-24 07:10:50,638 | INFO     | did not find any defunct processes belonging to 14135
[2025-07-24 09:48:31] 2025-07-24 07:10:50,639 | INFO     | ready for new job
[2025-07-24 09:48:31] 2025-07-24 07:10:50,639 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-07-24 09:48:31] 2025-07-24 07:10:50,641 | INFO     | ***************************************
[2025-07-24 09:48:31] 2025-07-24 07:10:50,641 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-07-24 09:48:31] 2025-07-24 07:10:50,642 | INFO     | ***************************************
[2025-07-24 09:48:31] 2025-07-24 07:10:50,642 | INFO     | 
[2025-07-24 09:48:31] 2025-07-24 07:10:50,642 | INFO     | pilot is running in a VM
[2025-07-24 09:48:31] 2025-07-24 07:10:50,642 | INFO     | architecture information:
[2025-07-24 09:48:31] 2025-07-24 07:10:50,653 | INFO     | executing command: cat /etc/os-release
[2025-07-24 09:48:31] 2025-07-24 07:10:50,856 | INFO     | cat /etc/os-release:
[2025-07-24 09:48:31] NAME="CentOS Linux"
[2025-07-24 09:48:31] VERSION="7 (Core)"
[2025-07-24 09:48:31] ID="centos"
[2025-07-24 09:48:31] ID_LIKE="rhel fedora"
[2025-07-24 09:48:31] VERSION_ID="7"
[2025-07-24 09:48:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-07-24 09:48:31] ANSI_COLOR="0;31"
[2025-07-24 09:48:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-07-24 09:48:31] HOME_URL="https://www.centos.org/"
[2025-07-24 09:48:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-07-24 09:48:31] 
[2025-07-24 09:48:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-07-24 09:48:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-07-24 09:48:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-07-24 09:48:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-07-24 09:48:31] 
[2025-07-24 09:48:31] 2025-07-24 07:10:50,857 | INFO     | ***************************************
[2025-07-24 09:48:31] 2025-07-24 07:10:51,360 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-07-24 09:48:31] 2025-07-24 07:10:51,473 | INFO     | sufficient remaining disk space (496033071104 B)
[2025-07-24 09:48:31] 2025-07-24 07:10:51,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-07-24 09:48:31] 2025-07-24 07:10:51,474 | INFO     | current server update state: UPDATING_FINAL
[2025-07-24 09:48:31] 2025-07-24 07:10:51,474 | INFO     | update_server=False
[2025-07-24 09:48:31] 2025-07-24 07:10:51,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-07-24 09:48:31] 2025-07-24 07:10:51,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-07-24 09:48:31] 2025-07-24 07:10:51,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-07-24 09:48:31] 2025-07-24 07:10:51,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-07-24 09:48:31] 2025-07-24 07:10:51,482 | INFO     | aborting loop
[2025-07-24 09:48:31] 2025-07-24 07:10:51,908 | INFO     | all data control threads have been joined
[2025-07-24 09:48:31] 2025-07-24 07:10:52,433 | INFO     | all payload control threads have been joined
[2025-07-24 09:48:31] 2025-07-24 07:10:52,479 | INFO     | [job] retrieve thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:52,488 | INFO     | [job] job monitor thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:52,498 | INFO     | all job control threads have been joined
[2025-07-24 09:48:31] 2025-07-24 07:10:52,536 | INFO     | [data] copytool_in thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:52,758 | INFO     | [payload] validate_post thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:52,767 | INFO     | [payload] failed_post thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:52,914 | INFO     | [data] control thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,084 | INFO     | [payload] validate_pre thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,205 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-07-24 09:48:31] 2025-07-24 07:10:53,388 | INFO     | [payload] run_realtimelog thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,400 | INFO     | [job] create_data_payload thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,418 | INFO     | [job] validate thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,439 | INFO     | [payload] control thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,479 | INFO     | [payload] execute_payloads thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,486 | INFO     | [data] copytool_out thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:53,504 | INFO     | [job] control thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:54,211 | INFO     | [job] queue monitor thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:55,487 | INFO     | [data] queue_monitor thread has finished
[2025-07-24 09:48:31] 2025-07-24 07:10:56,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698009995072)>', '<ExcThread(monitor, started 139697401607936)>']
[2025-07-24 09:48:31] 2025-07-24 07:11:01,869 | INFO     | all workflow threads have been joined
[2025-07-24 09:48:31] 2025-07-24 07:11:01,869 | INFO     | end of generic workflow (traces error code: 0)
[2025-07-24 09:48:31] 2025-07-24 07:11:01,869 | INFO     | traces error code: 0
[2025-07-24 09:48:31] 2025-07-24 07:11:01,870 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-07-24 09:48:31] 2025-07-24 07:11:20,636 | INFO     | PID=7597 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-07-24 09:48:31] 2025-07-24 07:11:20,637 | INFO     | .. there are 9 such processes running
[2025-07-24 09:48:31] 2025-07-24 07:11:20,637 | INFO     | found 0 job(s) in 20 queues
[2025-07-24 09:48:31] 2025-07-24 07:11:20,637 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-07-24 09:48:31] 2025-07-24 07:11:20,637 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-07-24 09:48:31] 2025-07-24 07:11:20,637 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-07-24 09:48:31] 2025-07-24 07:11:20,637 | CRITICAL | thread 'MainThread' is not alive
[2025-07-24 09:48:31] 2025-07-24 07:11:20,637 | INFO     | [monitor] control thread has ended
[2025-07-24 09:48:31] 2025-07-24 07:11:20,877 [wrapper] ==== pilot stdout END ====
[2025-07-24 09:48:31] 2025-07-24 07:11:20,968 [wrapper] ==== wrapper stdout RESUME ====
[2025-07-24 09:48:31] 2025-07-24 07:11:21,067 [wrapper] pilotpid: 7597
[2025-07-24 09:48:31] 2025-07-24 07:11:21,185 [wrapper] Pilot exit status: 0
[2025-07-24 09:48:31] 2025-07-24 07:11:21,722 [wrapper] pandaids: 6742327647
[2025-07-24 09:48:31] 2025-07-24 07:11:22,692 [wrapper] cleanup supervisor_pilot  7911 7598
[2025-07-24 09:48:31] 2025-07-24 07:11:22,788 [wrapper] Test setup, not cleaning
[2025-07-24 09:48:31] 2025-07-24 07:11:22,890 [wrapper] apfmon messages muted
[2025-07-24 09:48:31] 2025-07-24 07:11:22,979 [wrapper] ==== wrapper stdout END ====
[2025-07-24 09:48:31] 2025-07-24 07:11:23,066 [wrapper] ==== wrapper stderr END ====
[2025-07-24 09:48:31]  *** Error codes and diagnostics ***
[2025-07-24 09:48:31]     "exeErrorCode": 0,
[2025-07-24 09:48:31]     "exeErrorDiag": "",
[2025-07-24 09:48:31]     "pilotErrorCode": 0,
[2025-07-24 09:48:31]     "pilotErrorDiag": "",
[2025-07-24 09:48:31]  *** Listing of results directory ***
[2025-07-24 09:48:31] total 609100
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc    530466 Jul 23 13:45 pilot3.tar.gz
[2025-07-24 09:48:31] -rwx------. 1 boinc boinc     36292 Jul 23 13:49 runpilot2-wrapper.sh
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc      5112 Jul 23 13:49 queuedata.json
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc       100 Jul 24 03:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-07-24 09:48:31] -rwxr-xr-x. 1 boinc boinc      7986 Jul 24 03:11 run_atlas
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc       105 Jul 24 03:11 job.xml
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc      6391 Jul 24 03:11 init_data.xml
[2025-07-24 09:48:31] -rw-r--r--. 2 boinc boinc 333204939 Jul 24 03:11 EVNT.45697470._000230.pool.root.1
[2025-07-24 09:48:31] -rw-r--r--. 2 boinc boinc     15095 Jul 24 03:11 start_atlas.sh
[2025-07-24 09:48:31] drwxrwx--x. 2 boinc boinc        68 Jul 24 03:11 shared
[2025-07-24 09:48:31] -rw-r--r--. 2 boinc boinc    542904 Jul 24 03:11 input.tar.gz
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc         0 Jul 24 03:11 boinc_lockfile
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc      2614 Jul 24 03:11 pandaJob.out
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc    979632 Jul 24 03:11 agis_schedconf.cvmfs.json
[2025-07-24 09:48:31] drwx------. 4 boinc boinc      4096 Jul 24 03:11 pilot3
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc 282046305 Jul 24 09:07 HITS.45697472._005751.pool.root.1
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc       531 Jul 24 09:08 boinc_task_state.xml
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc      1018 Jul 24 09:09 memory_monitor_summary.json
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc   1593041 Jul 24 09:09 agis_ddmendpoints.agis.ALL.json
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc    462927 Jul 24 09:09 log.45697472._005751.job.log.tgz.1
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc        95 Jul 24 09:10 pilot_heartbeat.json
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc      7775 Jul 24 09:10 heartbeat.json
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc       889 Jul 24 09:11 pilotlog.txt
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc   1838852 Jul 24 09:11 log.45697472._005751.job.log.1
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc       357 Jul 24 09:11 output.list
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc       620 Jul 24 09:11 runtime_log
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc   2324480 Jul 24 09:11 result.tar.gz
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc       658 Jul 24 09:11 TbfKDmb9my7n9Rq4apOajLDm4fhM0noT9bVof3QYDmfCwKDmfzcMRm.diag
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc      8660 Jul 24 09:11 runtime_log.err
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc      8192 Jul 24 09:48 boinc_mmap_file
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc        28 Jul 24 09:48 wrapper_checkpoint.txt
[2025-07-24 09:48:31] -rw-r--r--. 1 boinc boinc     20543 Jul 24 09:48 stderr.txt
[2025-07-24 09:48:31] HITS file was successfully produced:
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc 282046305 Jul 24 09:07 shared/HITS.pool.root.1
[2025-07-24 09:48:31]  *** Contents of shared directory: ***
[2025-07-24 09:48:31] total 603652
[2025-07-24 09:48:31] -rw-r--r--. 2 boinc boinc 333204939 Jul 24 03:11 ATLAS.root_0
[2025-07-24 09:48:31] -rw-r--r--. 2 boinc boinc     15095 Jul 24 03:11 start_atlas.sh
[2025-07-24 09:48:31] -rw-r--r--. 2 boinc boinc    542904 Jul 24 03:11 input.tar.gz
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc 282046305 Jul 24 09:07 HITS.pool.root.1
[2025-07-24 09:48:31] -rw-------. 1 boinc boinc   2324480 Jul 24 09:11 result.tar.gz
09:48:33 (3918): run_atlas exited; CPU time 83089.564951
09:48:33 (3918): called boinc_finish(0)

</stderr_txt>
]]>

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